View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4475_low_2 (Length: 474)
Name: NF4475_low_2
Description: NF4475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4475_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 393; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 24 - 456
Target Start/End: Complemental strand, 42559369 - 42558937
Alignment:
| Q |
24 |
cacagacactactttctcctttcttacatctcacactcctttcatcaaaatcgagtctcacaacatcaatgtcacttccaacattcttgcnnnnnnnnnn |
123 |
Q |
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| T |
42559369 |
cacagacactactttctcctttcttacatctcacactcctttcatcaaaatcgagtctcacaacatcaatgtcacttccaacattcttgcaaaaaacaaa |
42559270 |
T |
|
| Q |
124 |
nncgacactgtttctatttcaccgttgcaacaaatcatggaacatgaactgaaccgtaacacatggcaagatcgtaccggtattgatactgacatgtttg |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42559269 |
aacgacactgtttctatttcaccgttgcaacaaatcatggaacatgaactgaaccgtaacacatggcaagatcgtaccggtattgatactgacatgtttg |
42559170 |
T |
|
| Q |
224 |
ttgctagcatttatgctatgcctgatgaaaaaacatgggtggtggttatgagacttcatgttgcagcatgtgatagaacaactgcggtttcacttttgag |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42559169 |
ttgctagcatttatgctatgcctgatgaaaaaacatgggtggtggttatgagacttcatgttgcagcatgtgatagaacaactgcggtttcacttttgag |
42559070 |
T |
|
| Q |
324 |
ggagttgcttgtgttgatgaaagatgaggaaaaagaggagaatgttgtttttgttgaggatgttgttcctttggcgattgaggatcttgttcctggtcgt |
423 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42559069 |
ggagttgcttgtgttgatgaaagatgaggaaaaagaggagaatgttgttgttgttgaggatgttgttcctttggcgattgaggatcttgttcctggtcgt |
42558970 |
T |
|
| Q |
424 |
aaagggaagaaacatatttgggcgcgtggttta |
456 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
42558969 |
aaagggaagaaacatatttgggcgcgtggttta |
42558937 |
T |
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