View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4476-Insertion-6 (Length: 270)
Name: NF4476-Insertion-6
Description: NF4476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4476-Insertion-6 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 42558941 - 42558671
Alignment:
| Q |
8 |
gtttagacgtgcttagttactctgttaattcttttaggtttactaatttgaaatttaatgatacaaaaaatgctaggttttcacaagtggttagaatgca |
107 |
Q |
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| T |
42558941 |
gtttagacgtgcttagttactctgttaattcttttaggtttactaatttgaaatttaatgatacaaaaaatgctaggttttcacaagtggttagaatgca |
42558842 |
T |
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| Q |
108 |
actcaatcaaactgacacccagagggttttagatgtaagccctaatctattttatgtttggtaccgctaatcaccatgattttttcaaaaccgcat---- |
203 |
Q |
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| T |
42558841 |
actcaatcaaactgacaccaagagggttttagatgtaagccctaatctattttatgtttggtaccgcgaatcaccatgattttttcaaaacctcatattg |
42558742 |
T |
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| Q |
204 |
-------------attatagcgattcttgttaaccaaagtggtatcaaacataggagcttatatttttccc |
261 |
Q |
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| T |
42558741 |
tagcttcttcaaaattatagcgattcttgttaaccaaagtgatatcaaacatatgagcttatatttttccc |
42558671 |
T |
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