View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4476_high_7 (Length: 334)

Name: NF4476_high_7
Description: NF4476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4476_high_7
NF4476_high_7
[»] chr3 (65 HSPs)
chr3 (12-195)||(36354272-36354455)
chr3 (193-334)||(42490318-42490459)
chr3 (194-334)||(13499457-13499597)
chr3 (190-334)||(39866263-39866407)
chr3 (192-334)||(27010596-27010738)
chr3 (191-334)||(20765193-20765336)
chr3 (194-334)||(21797556-21797696)
chr3 (194-334)||(42761605-42761745)
chr3 (191-334)||(27334853-27334996)
chr3 (191-334)||(6910331-6910474)
chr3 (193-334)||(21005292-21005433)
chr3 (193-334)||(33415798-33415939)
chr3 (192-334)||(43467864-43468006)
chr3 (193-334)||(36227544-36227685)
chr3 (193-312)||(34912286-34912405)
chr3 (194-334)||(19823900-19824035)
chr3 (205-334)||(33803532-33803662)
chr3 (194-334)||(54507641-54507781)
chr3 (235-334)||(30213845-30213944)
chr3 (225-334)||(38137855-38137964)
chr3 (194-334)||(43181477-43181618)
chr3 (193-283)||(45613572-45613662)
chr3 (194-334)||(44561784-44561924)
chr3 (193-326)||(15332936-15333069)
chr3 (19-160)||(26181909-26182051)
chr3 (194-326)||(48334651-48334782)
chr3 (199-323)||(22786635-22786757)
chr3 (200-310)||(25527412-25527520)
chr3 (191-261)||(32220860-32220930)
chr3 (199-323)||(22782271-22782393)
chr3 (195-326)||(41252896-41253024)
chr3 (191-326)||(15568065-15568199)
chr3 (225-324)||(52167240-52167339)
chr3 (209-326)||(3430407-3430521)
chr3 (292-334)||(32220931-32220973)
chr3 (248-334)||(44856400-44856486)
chr3 (287-332)||(28690338-28690383)
chr3 (253-326)||(41751540-41751613)
chr3 (250-324)||(41943270-41943344)
chr3 (233-298)||(27813446-27813511)
chr3 (85-161)||(29586254-29586330)
chr3 (193-325)||(30057298-30057430)
chr3 (250-334)||(33128041-33128125)
chr3 (252-315)||(17643789-17643852)
chr3 (191-310)||(23940508-23940627)
chr3 (192-222)||(19912187-19912217)
chr3 (267-333)||(23224279-23224345)
chr3 (193-223)||(27010473-27010503)
chr3 (192-222)||(38806354-38806384)
chr3 (197-271)||(42049784-42049858)
chr3 (83-161)||(48950537-48950615)
chr3 (189-222)||(198850-198883)
chr3 (194-223)||(6910567-6910596)
chr3 (193-222)||(12094581-12094610)
chr3 (190-223)||(13499331-13499364)
chr3 (193-222)||(19241917-19241946)
chr3 (194-223)||(20765429-20765458)
chr3 (193-222)||(29375137-29375166)
chr3 (56-121)||(34373638-34373703)
chr3 (56-121)||(34373788-34373853)
chr3 (209-334)||(42469589-42469713)
chr3 (194-223)||(42761483-42761512)
chr3 (65-110)||(43092981-43093026)
chr3 (57-121)||(27033608-27033672)
chr3 (194-222)||(36881282-36881310)
[»] scaffold0022 (2 HSPs)
scaffold0022 (193-334)||(100769-100910)
scaffold0022 (194-223)||(100647-100676)
[»] chr7 (72 HSPs)
chr7 (191-334)||(16778502-16778645)
chr7 (188-334)||(47156021-47156167)
chr7 (193-334)||(28061637-28061778)
chr7 (194-334)||(36623308-36623448)
chr7 (194-334)||(20885103-20885243)
chr7 (200-334)||(40256063-40256197)
chr7 (193-334)||(38851969-38852110)
chr7 (193-334)||(41897987-41898128)
chr7 (194-334)||(42890465-42890605)
chr7 (194-334)||(48602436-48602576)
chr7 (194-334)||(32431480-32431620)
chr7 (194-334)||(36585109-36585249)
chr7 (194-334)||(40090040-40090180)
chr7 (192-334)||(44732010-44732152)
chr7 (194-334)||(39130048-39130188)
chr7 (199-334)||(7438908-7439043)
chr7 (203-334)||(46479838-46479969)
chr7 (192-334)||(25566670-25566811)
chr7 (193-334)||(35117125-35117265)
chr7 (194-330)||(42877386-42877522)
chr7 (194-314)||(7457864-7457983)
chr7 (194-334)||(46103492-46103625)
chr7 (201-334)||(30342081-30342214)
chr7 (194-334)||(41088587-41088727)
chr7 (194-334)||(41134610-41134745)
chr7 (201-334)||(3851084-3851214)
chr7 (194-334)||(8683818-8683955)
chr7 (204-334)||(11502702-11502832)
chr7 (192-326)||(6766680-6766814)
chr7 (194-294)||(46322127-46322227)
chr7 (204-334)||(5788499-5788629)
chr7 (193-334)||(2198601-2198742)
chr7 (201-310)||(6174843-6174952)
chr7 (201-324)||(4131635-4131758)
chr7 (267-334)||(21379817-21379884)
chr7 (194-321)||(36341620-36341747)
chr7 (194-334)||(35570171-35570316)
chr7 (49-155)||(40019605-40019710)
chr7 (201-310)||(7169133-7169242)
chr7 (265-334)||(23707545-23707614)
chr7 (201-326)||(27045538-27045663)
chr7 (201-324)||(5529018-5529141)
chr7 (197-334)||(26161599-26161739)
chr7 (194-334)||(3785520-3785660)
chr7 (192-292)||(42662185-42662284)
chr7 (193-326)||(16870610-16870743)
chr7 (194-319)||(49110607-49110732)
chr7 (206-326)||(49101943-49102063)
chr7 (194-334)||(45331915-45332057)
chr7 (291-334)||(46480016-46480059)
chr7 (189-223)||(25566543-25566577)
chr7 (194-324)||(36515839-36515969)
chr7 (267-319)||(4048871-4048923)
chr7 (190-222)||(25060158-25060190)
chr7 (191-223)||(28061512-28061544)
chr7 (252-320)||(37467444-37467511)
chr7 (191-223)||(41898221-41898253)
chr7 (286-334)||(46321274-46321322)
chr7 (191-223)||(47156260-47156292)
chr7 (267-323)||(47525969-47526025)
chr7 (191-222)||(27813808-27813839)
chr7 (250-313)||(38767202-38767265)
chr7 (193-222)||(10981507-10981536)
chr7 (56-121)||(21151109-21151174)
chr7 (194-223)||(36623541-36623570)
chr7 (194-223)||(46103370-46103399)
chr7 (193-292)||(2952421-2952521)
chr7 (36-88)||(4705380-4705432)
chr7 (49-121)||(7362525-7362597)
chr7 (242-310)||(34750550-34750618)
chr7 (57-121)||(45260481-45260545)
chr7 (195-223)||(48602669-48602697)
[»] chr6 (57 HSPs)
chr6 (191-334)||(32671813-32671956)
chr6 (193-334)||(18668810-18668951)
chr6 (189-334)||(32414801-32414946)
chr6 (191-334)||(4147928-4148071)
chr6 (193-334)||(19088080-19088221)
chr6 (194-334)||(22054772-22054912)
chr6 (194-334)||(6563226-6563366)
chr6 (194-334)||(24624063-24624203)
chr6 (189-334)||(17213906-17214051)
chr6 (190-334)||(20226420-20226564)
chr6 (190-334)||(22120404-22120548)
chr6 (192-334)||(17257773-17257915)
chr6 (201-334)||(3989386-3989518)
chr6 (201-334)||(15383052-15383185)
chr6 (189-334)||(25475935-25476075)
chr6 (225-334)||(1040855-1040964)
chr6 (191-334)||(20437135-20437279)
chr6 (192-334)||(24955518-24955654)
chr6 (194-334)||(10520468-10520608)
chr6 (205-333)||(28477764-28477892)
chr6 (193-333)||(29790205-29790345)
chr6 (202-307)||(31569175-31569280)
chr6 (205-333)||(29693894-29694022)
chr6 (205-334)||(21540751-21540880)
chr6 (205-334)||(12225986-12226115)
chr6 (190-314)||(15337484-15337608)
chr6 (195-334)||(4440851-4440990)
chr6 (252-323)||(2360048-2360119)
chr6 (250-324)||(23158041-23158115)
chr6 (200-310)||(31869714-31869824)
chr6 (231-326)||(10298703-10298798)
chr6 (285-334)||(16193004-16193053)
chr6 (203-334)||(17155158-17155289)
chr6 (43-154)||(236071-236183)
chr6 (225-295)||(19240753-19240823)
chr6 (193-242)||(16193052-16193101)
chr6 (267-319)||(5495322-5495374)
chr6 (187-223)||(18668681-18668717)
chr6 (56-155)||(1249199-1249298)
chr6 (258-321)||(8101664-8101727)
chr6 (189-228)||(32420748-32420787)
chr6 (252-310)||(3623856-3623913)
chr6 (189-220)||(19996742-19996773)
chr6 (56-154)||(4804372-4804470)
chr6 (56-154)||(7162008-7162106)
chr6 (192-222)||(15064943-15064973)
chr6 (193-223)||(19087957-19087987)
chr6 (193-223)||(20437016-20437046)
chr6 (193-223)||(24623940-24623970)
chr6 (193-222)||(1605578-1605607)
chr6 (193-222)||(7761300-7761329)
chr6 (9-147)||(17398699-17398838)
chr6 (193-222)||(19996321-19996350)
chr6 (194-223)||(22055005-22055034)
chr6 (193-222)||(29260191-29260220)
chr6 (194-320)||(7048998-7049128)
chr6 (194-222)||(8626482-8626510)
[»] chr1 (66 HSPs)
chr1 (193-334)||(30701717-30701858)
chr1 (194-334)||(36399098-36399238)
chr1 (191-334)||(52024023-52024166)
chr1 (189-334)||(6402532-6402677)
chr1 (193-334)||(11641189-11641330)
chr1 (193-334)||(40771894-40772035)
chr1 (192-334)||(17305952-17306094)
chr1 (193-334)||(30003532-30003673)
chr1 (193-334)||(36757608-36757749)
chr1 (189-334)||(42788664-42788809)
chr1 (194-334)||(16120562-16120702)
chr1 (193-334)||(24321258-24321401)
chr1 (198-334)||(40977610-40977746)
chr1 (193-334)||(6766371-6766509)
chr1 (196-334)||(27292642-27292780)
chr1 (194-334)||(9342767-9342907)
chr1 (192-334)||(42735287-42735432)
chr1 (197-334)||(26910079-26910216)
chr1 (207-334)||(15912458-15912585)
chr1 (191-334)||(4302115-4302255)
chr1 (239-334)||(42367418-42367513)
chr1 (200-326)||(15382556-15382682)
chr1 (210-334)||(48375018-48375143)
chr1 (203-334)||(28030803-28030934)
chr1 (204-326)||(3485337-3485459)
chr1 (205-334)||(38153399-38153528)
chr1 (194-326)||(40800517-40800649)
chr1 (193-326)||(44647843-44647976)
chr1 (21-155)||(49384678-49384810)
chr1 (280-334)||(25171240-25171294)
chr1 (193-298)||(44644513-44644618)
chr1 (209-334)||(30385270-30385392)
chr1 (193-310)||(27984555-27984671)
chr1 (232-334)||(16689862-16689961)
chr1 (267-319)||(22575724-22575776)
chr1 (267-334)||(7568608-7568675)
chr1 (240-334)||(9881322-9881416)
chr1 (193-334)||(19711814-19711951)
chr1 (257-324)||(31444986-31445053)
chr1 (63-137)||(37335999-37336074)
chr1 (201-306)||(34634914-34635019)
chr1 (53-154)||(12380960-12381061)
chr1 (53-154)||(12385027-12385128)
chr1 (190-222)||(44227844-44227876)
chr1 (12-150)||(5803769-5803907)
chr1 (252-319)||(14777090-14777157)
chr1 (192-223)||(36399331-36399362)
chr1 (191-222)||(41959822-41959853)
chr1 (56-162)||(5047434-5047539)
chr1 (55-121)||(7841762-7841828)
chr1 (192-222)||(9588668-9588698)
chr1 (193-223)||(11641066-11641096)
chr1 (195-272)||(25170880-25170955)
chr1 (193-223)||(36757485-36757515)
chr1 (193-223)||(40771771-40771801)
chr1 (189-222)||(284328-284361)
chr1 (269-334)||(323990-324055)
chr1 (193-222)||(3943059-3943088)
chr1 (189-222)||(3943776-3943809)
chr1 (56-121)||(12151724-12151789)
chr1 (194-223)||(52024259-52024288)
chr1 (266-334)||(19895288-19895356)
chr1 (194-222)||(23045528-23045556)
chr1 (194-222)||(24772154-24772182)
chr1 (194-222)||(41959078-41959106)
chr1 (280-324)||(44452120-44452164)
[»] chr8 (60 HSPs)
chr8 (192-334)||(42587370-42587512)
chr8 (189-334)||(623171-623316)
chr8 (190-334)||(616779-616923)
chr8 (192-334)||(32998448-32998590)
chr8 (194-334)||(14237280-14237420)
chr8 (194-334)||(18044425-18044565)
chr8 (194-334)||(132017-132157)
chr8 (194-334)||(40494384-40494524)
chr8 (194-334)||(41263810-41263950)
chr8 (197-334)||(3100617-3100754)
chr8 (194-334)||(36641980-36642121)
chr8 (194-334)||(8394346-8394486)
chr8 (190-334)||(35403512-35403656)
chr8 (200-334)||(2766170-2766304)
chr8 (205-334)||(13216843-13216972)
chr8 (201-334)||(38957177-38957310)
chr8 (194-334)||(5878317-5878456)
chr8 (199-334)||(4270214-4270349)
chr8 (191-334)||(22489395-22489539)
chr8 (204-334)||(11637792-11637922)
chr8 (194-296)||(24524100-24524202)
chr8 (192-324)||(33700205-33700338)
chr8 (193-298)||(36167075-36167180)
chr8 (193-331)||(6414090-6414228)
chr8 (196-326)||(38497085-38497204)
chr8 (225-334)||(3370378-3370487)
chr8 (193-258)||(13217219-13217284)
chr8 (197-334)||(18090332-18090468)
chr8 (194-326)||(18035100-18035232)
chr8 (267-334)||(40716645-40716712)
chr8 (225-333)||(5173282-5173391)
chr8 (194-326)||(40204852-40204984)
chr8 (275-334)||(38958883-38958942)
chr8 (192-326)||(9632153-9632287)
chr8 (37-135)||(13585955-13586053)
chr8 (280-334)||(32855584-32855638)
chr8 (191-223)||(617016-617048)
chr8 (191-223)||(623409-623441)
chr8 (38-110)||(44517697-44517769)
chr8 (256-326)||(18020928-18021001)
chr8 (285-324)||(21109818-21109857)
chr8 (189-223)||(2766043-2766077)
chr8 (192-222)||(40058552-40058582)
chr8 (193-223)||(40494617-40494647)
chr8 (190-223)||(5878549-5878582)
chr8 (193-222)||(8697923-8697952)
chr8 (194-223)||(14237513-14237542)
chr8 (56-121)||(30426722-30426787)
chr8 (305-334)||(36167819-36167848)
chr8 (193-222)||(40918978-40919007)
chr8 (193-222)||(41307986-41308015)
chr8 (190-222)||(2540180-2540212)
chr8 (195-223)||(3100492-3100520)
chr8 (194-222)||(3585451-3585479)
chr8 (194-222)||(27034997-27035025)
chr8 (194-222)||(36068080-36068108)
chr8 (194-222)||(37345571-37345599)
chr8 (194-222)||(40486478-40486506)
chr8 (194-222)||(43275646-43275674)
chr8 (194-222)||(45278726-45278754)
[»] chr2 (52 HSPs)
chr2 (192-334)||(19141188-19141330)
chr2 (193-334)||(39358145-39358286)
chr2 (194-334)||(8042144-8042284)
chr2 (196-334)||(5404998-5405136)
chr2 (194-334)||(7608049-7608189)
chr2 (194-334)||(44365157-44365297)
chr2 (191-334)||(2183082-2183222)
chr2 (201-334)||(6223073-6223206)
chr2 (208-332)||(11841717-11841841)
chr2 (194-334)||(7799847-7799987)
chr2 (194-334)||(33607377-33607512)
chr2 (205-334)||(36072185-36072314)
chr2 (200-334)||(32774597-32774731)
chr2 (193-334)||(36719446-36719581)
chr2 (194-307)||(19262680-19262793)
chr2 (239-334)||(13125267-13125362)
chr2 (229-334)||(44644905-44645010)
chr2 (244-334)||(9172268-9172358)
chr2 (204-321)||(11931701-11931818)
chr2 (226-326)||(22839057-22839157)
chr2 (190-324)||(24251956-24252089)
chr2 (42-158)||(6591101-6591217)
chr2 (191-298)||(9006942-9007049)
chr2 (250-324)||(38292008-38292082)
chr2 (205-307)||(43444689-43444791)
chr2 (191-334)||(42133749-42133889)
chr2 (209-320)||(16865069-16865180)
chr2 (233-324)||(31610785-31610876)
chr2 (250-323)||(13117457-13117530)
chr2 (225-334)||(19165905-19166013)
chr2 (257-326)||(38839136-38839205)
chr2 (250-334)||(9553843-9553926)
chr2 (12-110)||(36758722-36758815)
chr2 (191-223)||(5405229-5405261)
chr2 (191-223)||(7608282-7608314)
chr2 (192-276)||(13598440-13598523)
chr2 (191-223)||(19141063-19141095)
chr2 (191-321)||(24093671-24093802)
chr2 (56-155)||(13238604-13238703)
chr2 (285-324)||(24259493-24259532)
chr2 (192-222)||(3518906-3518936)
chr2 (56-154)||(35316749-35316847)
chr2 (225-310)||(36177723-36177809)
chr2 (194-223)||(11841593-11841622)
chr2 (193-222)||(12969988-12970017)
chr2 (281-334)||(33228564-33228617)
chr2 (194-223)||(44365390-44365419)
chr2 (186-214)||(441411-441439)
chr2 (194-222)||(1102503-1102531)
chr2 (267-324)||(24607841-24607894)
chr2 (237-309)||(31904027-31904099)
chr2 (194-222)||(34224403-34224431)
[»] chr5 (52 HSPs)
chr5 (194-334)||(978077-978217)
chr5 (194-334)||(40156198-40156338)
chr5 (191-334)||(8086152-8086295)
chr5 (191-334)||(33387217-33387360)
chr5 (199-334)||(14634279-14634414)
chr5 (194-334)||(9502749-9502889)
chr5 (203-334)||(3472399-3472530)
chr5 (191-334)||(33587591-33587734)
chr5 (193-334)||(18094203-18094344)
chr5 (192-334)||(30354996-30355137)
chr5 (206-334)||(11251126-11251254)
chr5 (194-324)||(24992270-24992400)
chr5 (193-334)||(34111961-34112097)
chr5 (194-334)||(7224165-7224305)
chr5 (194-334)||(9050698-9050827)
chr5 (191-331)||(11785850-11785991)
chr5 (193-334)||(38916372-38916513)
chr5 (194-324)||(24916378-24916510)
chr5 (194-334)||(12007754-12007894)
chr5 (240-334)||(27109735-27109828)
chr5 (246-327)||(12447547-12447626)
chr5 (253-324)||(11761125-11761196)
chr5 (204-334)||(27579552-27579681)
chr5 (193-310)||(39776629-39776746)
chr5 (267-334)||(32400400-32400467)
chr5 (237-334)||(3422332-3422432)
chr5 (225-323)||(12456773-12456871)
chr5 (198-311)||(32017217-32017330)
chr5 (252-326)||(18998745-18998819)
chr5 (225-326)||(6996012-6996112)
chr5 (53-161)||(3057333-3057441)
chr5 (267-326)||(12359951-12360010)
chr5 (192-306)||(20692541-20692653)
chr5 (195-253)||(12448275-12448333)
chr5 (94-155)||(128140-128201)
chr5 (235-292)||(31197854-31197911)
chr5 (194-260)||(10696790-10696856)
chr5 (190-223)||(9502623-9502656)
chr5 (193-270)||(18598543-18598620)
chr5 (238-318)||(26387017-26387097)
chr5 (56-154)||(32129670-32129768)
chr5 (194-223)||(978310-978339)
chr5 (194-223)||(14634157-14634186)
chr5 (189-222)||(30720741-30720774)
chr5 (194-223)||(33387452-33387481)
chr5 (56-121)||(35660662-35660727)
chr5 (251-296)||(37495667-37495712)
chr5 (240-292)||(5947715-5947767)
chr5 (194-222)||(12807102-12807130)
chr5 (194-222)||(15305237-15305265)
chr5 (194-222)||(25773649-25773677)
chr5 (63-155)||(27762836-27762927)
[»] chr4 (88 HSPs)
chr4 (194-334)||(26169986-26170126)
chr4 (192-334)||(38416772-38416914)
chr4 (193-334)||(47386408-47386549)
chr4 (194-334)||(25296702-25296842)
chr4 (194-334)||(29830343-29830483)
chr4 (194-334)||(44232199-44232339)
chr4 (194-334)||(55209696-55209836)
chr4 (192-334)||(43967721-43967863)
chr4 (194-334)||(17610280-17610420)
chr4 (194-334)||(54330812-54330952)
chr4 (204-334)||(12240300-12240430)
chr4 (193-334)||(35381016-35381157)
chr4 (194-334)||(2760852-2760989)
chr4 (194-334)||(31010214-31010354)
chr4 (193-334)||(38716886-38717029)
chr4 (194-334)||(26125708-26125848)
chr4 (203-334)||(12625260-12625391)
chr4 (197-334)||(55191827-55191964)
chr4 (201-333)||(25918210-25918342)
chr4 (194-314)||(35686373-35686493)
chr4 (197-334)||(17446755-17446892)
chr4 (193-334)||(50205742-50205883)
chr4 (194-326)||(19433488-19433624)
chr4 (225-334)||(45291863-45291972)
chr4 (34-162)||(33841835-33841963)
chr4 (194-334)||(9029571-9029714)
chr4 (201-334)||(50620804-50620937)
chr4 (231-334)||(4467641-4467744)
chr4 (197-298)||(55800837-55800938)
chr4 (194-332)||(27407741-27407881)
chr4 (198-326)||(3036984-3037112)
chr4 (194-334)||(36523090-36523230)
chr4 (193-334)||(37767080-37767221)
chr4 (194-334)||(39307696-39307836)
chr4 (225-334)||(19595736-19595845)
chr4 (205-334)||(2571004-2571133)
chr4 (193-318)||(7614614-7614739)
chr4 (203-334)||(30446307-30446437)
chr4 (193-311)||(54610861-54610980)
chr4 (193-326)||(38721336-38721469)
chr4 (250-324)||(14144589-14144663)
chr4 (187-331)||(5428571-5428713)
chr4 (232-334)||(19903772-19903874)
chr4 (204-324)||(20875379-20875499)
chr4 (250-334)||(50181116-50181200)
chr4 (19-161)||(3280868-3281010)
chr4 (200-295)||(34652208-34652303)
chr4 (267-334)||(55091309-55091376)
chr4 (195-334)||(30191595-30191729)
chr4 (201-321)||(34323076-34323198)
chr4 (56-154)||(18207093-18207191)
chr4 (210-324)||(56297834-56297948)
chr4 (191-292)||(29051681-29051782)
chr4 (225-326)||(32871489-32871590)
chr4 (205-292)||(23360189-23360273)
chr4 (267-321)||(27344083-27344137)
chr4 (189-278)||(19897634-19897723)
chr4 (190-223)||(26170220-26170253)
chr4 (237-334)||(29585967-29586063)
chr4 (197-310)||(34316524-34316636)
chr4 (240-323)||(50815007-50815091)
chr4 (189-326)||(51355168-51355307)
chr4 (192-326)||(10550422-10550555)
chr4 (56-154)||(12153095-12153193)
chr4 (280-314)||(34652158-34652192)
chr4 (300-334)||(35686513-35686547)
chr4 (189-223)||(45292065-45292099)
chr4 (56-154)||(56558203-56558301)
chr4 (194-223)||(2760730-2760759)
chr4 (194-223)||(4467520-4467549)
chr4 (193-222)||(12071560-12071589)
chr4 (56-121)||(12241461-12241526)
chr4 (193-222)||(14261043-14261072)
chr4 (194-223)||(19433358-19433387)
chr4 (193-222)||(21310424-21310453)
chr4 (205-298)||(25101731-25101824)
chr4 (193-222)||(25704650-25704679)
chr4 (194-223)||(38416650-38416679)
chr4 (193-222)||(40122734-40122763)
chr4 (194-223)||(44232077-44232106)
chr4 (194-223)||(55209574-55209603)
chr4 (94-166)||(4404212-4404284)
chr4 (191-219)||(12625488-12625516)
chr4 (205-326)||(27755730-27755855)
chr4 (194-222)||(34324832-34324860)
chr4 (266-326)||(35064107-35064167)
chr4 (49-121)||(39862474-39862546)
chr4 (231-291)||(56080019-56080079)
[»] scaffold0003 (1 HSPs)
scaffold0003 (191-334)||(161959-162102)
[»] scaffold0018 (1 HSPs)
scaffold0018 (197-334)||(67891-68028)
[»] scaffold0295 (2 HSPs)
scaffold0295 (191-334)||(13839-13982)
scaffold0295 (191-255)||(9369-9433)
[»] scaffold0056 (1 HSPs)
scaffold0056 (194-334)||(70961-71100)
[»] scaffold0225 (1 HSPs)
scaffold0225 (190-324)||(8965-9099)
[»] scaffold0099 (1 HSPs)
scaffold0099 (194-323)||(28784-28916)
[»] scaffold0029 (1 HSPs)
scaffold0029 (190-324)||(138162-138296)
[»] scaffold0262 (1 HSPs)
scaffold0262 (191-324)||(22777-22910)
[»] scaffold0595 (1 HSPs)
scaffold0595 (236-334)||(3990-4089)
[»] scaffold0608 (1 HSPs)
scaffold0608 (250-334)||(1576-1660)
[»] scaffold0009 (2 HSPs)
scaffold0009 (201-324)||(217007-217131)
scaffold0009 (250-334)||(53542-53626)
[»] scaffold0468 (1 HSPs)
scaffold0468 (55-154)||(5534-5633)
[»] scaffold0002 (1 HSPs)
scaffold0002 (285-324)||(315634-315673)
[»] scaffold0456 (1 HSPs)
scaffold0456 (56-134)||(13640-13718)
[»] scaffold0012 (1 HSPs)
scaffold0012 (56-154)||(207987-208085)
[»] scaffold0744 (1 HSPs)
scaffold0744 (94-155)||(1161-1222)
[»] scaffold0006 (1 HSPs)
scaffold0006 (56-121)||(73893-73958)
[»] scaffold0257 (1 HSPs)
scaffold0257 (194-222)||(23467-23495)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 12 - 195
Target Start/End: Original strand, 36354272 - 36354455
Alignment:
Q  12 gagatgaacacaaaaaagagaaagtgaatgctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatct 111  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36354272 gagatgaacacaaaaaagagaaagtggatgctttcaataaatgagtcccatcatcattaattattgtatactattttcaagattttttgtgtctttatct 36354371  T
Q  112 ttctaaattgcggaaattgagagaattgtaaatggagaggatctcaactcaaaataaactagtcatattattactattttaata 195  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36354372 ttctaaattgaggaaattgagagaattgtaaatggagaggatctcaactcaaaataaactagtcatattattactattttaata 36354455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 42490459 - 42490318
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  42490459 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 42490360  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  42490359 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 42490318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 13499597 - 13499457
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  13499597 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 13499498  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  13499497 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 13499457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 190 - 334
Target Start/End: Complemental strand, 39866407 - 39866263
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  39866407 ttaatactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaataca 39866308  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  39866307 aatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 39866263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 27010738 - 27010596
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  27010738 aatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaa 27010639  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  27010638 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 27010596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 20765193 - 20765336
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  20765193 taatactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaa 20765292  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  20765293 atattaacatgtaagatgttgtttgatttgtctcgacaaatatt 20765336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 21797556 - 21797696
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||    
T  21797556 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaata 21797655  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  21797656 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 21797696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 42761745 - 42761605
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  42761745 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 42761646  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  42761645 ttagcatgtaagatgttgtttgatttgtttcgacaaatatt 42761605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 27334996 - 27334853
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  27334996 taatactccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaa 27334897  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  27334896 atattagcatgtaagatgttgtttgatttgtctcgaaaaatatt 27334853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 6910331 - 6910474
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  6910331 taatactccccccgtttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaa 6910430  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| | ||||||||||||||||||||||||||| |||||||    
T  6910431 atattaacatgtaagatgttgtttgatttgtctcgaaaaatatt 6910474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 21005292 - 21005433
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||||| ||| ||||||| |||| |||||||| ||||    
T  21005292 atactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaat 21005391  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  21005392 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 21005433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 33415798 - 33415939
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    |||||||||| |||||||||||||||||||| |||||||||||||  |||| | ||||||||||||||| ||| |||||||||||| |||||||||||||    
T  33415798 atactccctctgtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaat 33415897  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  33415898 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 33415939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 43468006 - 43467864
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||| | ||    
T  43468006 aatactctctccgtttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaa 43467907  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  43467906 tattagcaggtaagatgttgtttgatttgtctcgacaaatatt 43467864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 36227544 - 36227685
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||| |||||||||| ||||||||||||||| ||| |||| || ||||||||||||||||||    
T  36227544 atactccctccgttttaaaatgcatgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaat 36227643  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  36227644 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 36227685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 34912405 - 34912286
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  34912405 ataccccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 34912306  T
Q  293 attagcgtgtaagatgttgt 312  Q
    |||||  |||||||||||||    
T  34912305 attagattgtaagatgttgt 34912286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 19823900 - 19824035
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||      |||||    
T  19823900 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtat------aaata 19823993  T
Q  294 ttagcgtgtaagatgttgtttg-atttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  19823994 ttagcatgtaagatgttgtttgaatttgtctcgacaaatatt 19824035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 33803532 - 33803662
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttt-taactaatgtataaatacaaatattagcgtgta 303  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||| ||||    
T  33803532 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgta 33803631  T
Q  304 agatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||| ||||||||||    
T  33803632 agatgttgtttgatttgtcttgacaaatatt 33803662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 54507641 - 54507781
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| |||||  ||| ||||||||||||||||||||||| |||    
T  54507641 tacttcctccgtttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagata 54507740  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||| | | ||||||||||    
T  54507741 ttagcatgtaagatgttgtttgatttatgttgacaaatatt 54507781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 30213845 - 30213944
Alignment:
Q  235 tgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30213845 tgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 30213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 38137855 - 38137964
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||||||| |||||||||| ||||| ||| |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38137855 ttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 38137954  T
Q  325 gacaaatatt 334  Q
     |||||||||    
T  38137955 tacaaatatt 38137964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 43181618 - 43181477
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttt-aactaatgtataaatacaaat 292  Q
    |||||| ||||||| |||||||||||  || ||| | |||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| ||||    
T  43181618 tactccatccgtttaaaaatacatgtttaattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaat 43181519  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||  ||||||||||||||| |||||||||||||||||||    
T  43181518 attagtatgtaagatgttgtttaatttgtctcgacaaatatt 43181477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 283
Target Start/End: Original strand, 45613572 - 45613662
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtata 283  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||    
T  45613572 atactccatccgtttcaaaattcatgtccaatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaatgtata 45613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 44561784 - 44561924
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| | |||||||||||||||||   |  ||||||||||||||||||||| |||||||||||||| ||| |||||||||||  |||||||||||||     
T  44561784 tactcctttcgtttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatg 44561883  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||  | |||||||||||||| ||||||| |||| |||||||    
T  44561884 ttgacatgtaagatgttgttcgatttgtttcgataaatatt 44561924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 15333069 - 15332936
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| || |||| ||||||||||||  | |||| ||||||||||||||||| |  ||| ||||||| | | |||||||||||| |||||||||||||    
T  15333069 atactccttctgttttaaaatacatgtcgcaattttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaat 15332970  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcga 326  Q
     ||||| ||||||||||||||||||| |||||||    
T  15332969 gttagcatgtaagatgttgtttgattggtctcga 15332936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 26182051 - 26181909
Alignment:
Q  19 acacaaaaaagagaaagtgaatgctttcaataaa---tgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttct 115  Q
    |||||||||||| ||  ||||||||||||| |||   || ||| ||||||||||||||||||||||||||||   ||||||||||||| ||||||||| |    
T  26182051 acacaaaaaagataa--tgaatgctttcaaaaaaaaatgggtcacatcatcattaattattgtatactatttataagattttttgtgtttttatcttttt 26181954  T
Q  116 aaattgcggaaattgagagaattgtaaatggagaggatctcaact 160  Q
    |  |   |||||| |||||||||||||||||||||||| ||||||    
T  26181953 atttgaaggaaatggagagaattgtaaatggagaggatgtcaact 26181909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 48334782 - 48334651
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||| ||||||||| ||  | |||| |||||| || ||||||| |   ||||||| || ||  |||||||||| | ||||||||||||||    
T  48334782 tactccctccgttttaaaatacatctcgtaattttacaatgtacattattcacatagtttactttaaccattttttttaacta-tatataaatacaaata 48334684  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||||| |||||||||||||||||||||||||||    
T  48334683 ttagcatgtaagatgttgtttgatttgtctcga 48334651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 22786635 - 22786757
Alignment:
Q  199 cctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagc 298  Q
    ||||||||||||| ||||||||  | ||||  |||||||||||||||| |  |||||||||||  || |||||||||||| |||||  |||||| || ||    
T  22786635 cctccgtttcaaactacatgtcgcaattttttaatgtgcactattcacatagcttactttgactctattttttaactaatatataa--acaaatgtttgc 22786732  T
Q  299 gtgtaagatgttgtttgatttgtct 323  Q
     ||||||||||||||||||||||||    
T  22786733 atgtaagatgttgtttgatttgtct 22786757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 25527412 - 25527520
Alignment:
Q  200 ctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcg 299  Q
    ||||||||| |||||||||||  | ||||||||||||   ||||||| |||||||||| ||| ||| ||||||||| || ||||||||||||||||| |     
T  25527412 ctccgtttcgaaatacatgtcgcatttttgcaatgtga--tattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaaca 25527509  T
Q  300 tgtaagatgtt 310  Q
    |||||||||||    
T  25527510 tgtaagatgtt 25527520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 32220860 - 32220930
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgac 261  Q
    ||||||||| ||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||||||    
T  32220860 taatactccatccgttttaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgac 32220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 22782271 - 22782393
Alignment:
Q  199 cctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagc 298  Q
    ||||||||||||| ||||||||  | ||||  |||||||||||||||| |  |||||||||||  || |||||||||||  |||||  |||||| || ||    
T  22782271 cctccgtttcaaactacatgtcgcaattttttaatgtgcactattcacatagcttactttgactctattttttaactaaaatataa--acaaatgtttgc 22782368  T
Q  299 gtgtaagatgttgtttgatttgtct 323  Q
     ||||||||||||||||||||||||    
T  22782369 atgtaagatgttgtttgatttgtct 22782393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 41253024 - 41252896
Alignment:
Q  195 actccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatat 294  Q
    ||||| || ||||||||||| |||||  | |||| ||||||||||||||||  |  |||||||| || ||| |||||||||||| ||||||||||||| |    
T  41253024 actccatctgtttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgt 41252925  T
Q  295 tagcgtgtaagatgttgtttgatttgtctcga 326  Q
    |||| | |||||   |||||||||||||||||    
T  41252924 tagcatataaga---tgtttgatttgtctcga 41252896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 326
Target Start/End: Complemental strand, 15568199 - 15568065
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||| || ||||||||||| |||||  | |||| ||||||||| |||| || |   ||| |||||  ||| |||||||||||| |||||||||||    
T  15568199 taatactccatctgtttcaaaata-atgtcgcaattttacaatgtgcattatttacatagtttaatttgatcatattttttaactaatatataaatacaa 15568101  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    || ||| |||||||||| |||||| |||||||||||    
T  15568100 atgttaccgtgtaagatattgttttatttgtctcga 15568065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 324
Target Start/End: Original strand, 52167240 - 52167339
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||| |||||| | ||||||  ||||||  |||||| ||| ||||||| |||| |||||||||||||||||   |||||||||||||||||||||||||    
T  52167240 ttttgtaatgtgtattattcatatgacttcttttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgtttgatttgtctc 52167339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 3430521 - 3430407
Alignment:
Q  209 aaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatg 308  Q
    |||||||||||   | |||| |||||||||||||| |  | |||||||||||| ||| |||||||||||| ||| |||| |||||||||| ||||| |      
T  3430521 aaaatacatgttgcaattttacaatgtgcactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgtaaaa-- 3430424  T
Q  309 ttgtttgatttgtctcga 326  Q
     |||||||||||||||||    
T  3430423 -tgtttgatttgtctcga 3430407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 32220931 - 32220973
Alignment:
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  32220931 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 32220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 44856400 - 44856486
Alignment:
Q  248 tgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||| || ||| |||||||||||  ||||||||||||| ||||  |||||||||||||| | ||||| |||| |||||||    
T  44856400 tgacttactttaactatactttttaactaacatataaatacaaatgttagtatgtaagatgttgttcgttttgtttcgataaatatt 44856486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 28690338 - 28690383
Alignment:
Q  287 acaaatattagcgtgtaagatgttgtttgatttgtctcgacaaata 332  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  28690338 acaaatattaacatgtaagatgttgtttgatttgtctcgacaaata 28690383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 41751613 - 41751540
Alignment:
Q  253 tactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||||||||  ||| |||||||||||| ||||||||||||| ||||| | || ||||||||||||| ||||||||    
T  41751613 tactttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgtttgatatgtctcga 41751540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 41943270 - 41943344
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||| ||| |||||| |||||||||||| | ||||||||||| |||   | |||||||||||||||||||||||    
T  41943270 acttattttaacaatattttttaactaatatttaaatacaaatgttaatatataagatgttgtttgatttgtctc 41943344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 27813511 - 27813446
Alignment:
Q  233 tgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagc 298  Q
    |||||||||||||| |  |||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  27813511 tgtgcactattcacatagcttattttgactatattttttaactaatatataaatacaaatgttagc 27813446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 29586330 - 29586254
Alignment:
Q  85 ttttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatctcaactc 161  Q
    |||||||  |||||||||||||||||| ||||||| |  ||||| ||||||||  |||||||||| ||||| |||||    
T  29586330 ttttcgaatttttttgtgtctttatctctctaaatggatgaaatggagagaataataaatggagatgatcttaactc 29586254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 325
Target Start/End: Original strand, 30057298 - 30057430
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    |||||||| || |||||||||||||||   | |||  ||| || || ||||||| | || |||||| || ||| |||||||||||| ||||||  |||||    
T  30057298 atactccccccatttcaaaatacatgtagtattttgacaacgttcattattcacataacatactttaaccatattttttaactaatatataaaagcaaat 30057397  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcg 325  Q
     ||||| | ||||||| |||| |||||||||||    
T  30057398 gttagcatataagatgatgttcgatttgtctcg 30057430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 33128125 - 33128041
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||  ||| ||||||||||||  ||||||| |||||||| | |||||||| |||| |||||||| |||| |||||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatattgtctgatttgtttcgataaatatt 33128041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 17643789 - 17643852
Alignment:
Q  252 ttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttg 315  Q
    ||||| |||| ||| |||||||||||| | ||||||||||| ||||| |||||||| |||||||    
T  17643789 ttactgtgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatattgtttg 17643852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 310
Target Start/End: Complemental strand, 23940627 - 23940508
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    |||||||| |||||||| ||||||||||||  | |||| ||| ||| ||| ||||  | | |||| |||||  || |||||||||||| |||||||| ||    
T  23940627 taatactctctccgttttaaaatacatgtcgcaattttacaacgtgtacttttcatataatttacattgaccttattttttaactaatatataaataaaa 23940528  T
Q  291 atattagcgtgtaagatgtt 310  Q
    || ||| | |||||||||||    
T  23940527 atgttaacatgtaagatgtt 23940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 19912217 - 19912187
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||    
T  19912217 aatactccctccgtttcaaaatacatgtcca 19912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 23224345 - 23224279
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatat 333  Q
    |||||||||||| ||||||| ||||||||||  ||||||| || |||||| || |||||| ||||||    
T  23224345 tttttaactaatatataaatgcaaatattagaatgtaagaagtggtttgaattttctcgataaatat 23224279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 27010473 - 27010503
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  27010473 atactccctccgtttcaaaatacatgtccaa 27010503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 38806384 - 38806354
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||    
T  38806384 aatactccctccgtttcaaaatacatgtcca 38806354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 42049784 - 42049858
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttt 271  Q
    |||||||||| ||||||||||| |  | ||||||||||||||| ||| || |||| ||||||||| ||| |||||    
T  42049784 tccctccgttccaaaatacatgccgcatttttgcaatgtgcacaatttacatgacatactttgactatatttttt 42049858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 48950615 - 48950537
Alignment:
Q  83 tattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatctcaactc 161  Q
    ||||||| ||||||||||| | ||||||||| ||||| |  ||||| ||||  | | ||||||||||||||||||||||    
T  48950615 tattttcaagattttttgtatttttatctttgtaaatggatgaaatagagaagagtttaaatggagaggatctcaactc 48950537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 198850 - 198883
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtcca 222  Q
    |||| |||||||||||||||||||||||||||||    
T  198850 tttattactccctccgtttcaaaatacatgtcca 198883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 6910596 - 6910567
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  6910596 tactccctccgtttcaaaatacatgtccaa 6910567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 12094581 - 12094610
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  12094581 atactccctccgtttcaaaatacatgtcca 12094610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 13499331 - 13499364
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||| |||||||||||||||||||    
T  13499331 ttaatactccctccatttcaaaatacatgtccaa 13499364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 19241946 - 19241917
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  19241946 atactccctccgtttcaaaatacatgtcca 19241917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 20765458 - 20765429
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  20765458 tactccctccgtttcaaaatacatgtccaa 20765429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 29375137 - 29375166
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  29375137 atactccctccgtttcaaaatacatgtcca 29375166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 34373638 - 34373703
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| |||||||||||||  | |||| ||||| ||||||||||| ||||||||| || ||||||    
T  34373638 gtcccaccatcattaattatattttacttttttcaagattttttgtctctttatctctccaaattg 34373703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 34373853 - 34373788
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  34373853 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 34373788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 334
Target Start/End: Complemental strand, 42469713 - 42469589
Alignment:
Q  209 aaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatg 308  Q
    ||||||||||||  | |||| ||||| ||| ||||||| ||||||| ||| ||  || ||||||| |||| | ||||||||||  ||| | | |||||||    
T  42469713 aaaatacatgtcgcattttttcaatgcgcattattcacgtgacttaatttaaccgtattttttaattaatatgtaaatacaaa-cttaacatataagatg 42469615  T
Q  309 ttgtttgatttgtctcgacaaatatt 334  Q
    ||||| ||||||| |||| |||||||    
T  42469614 ttgttcgatttgtatcgataaatatt 42469589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 42761483 - 42761512
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  42761483 tactccctccgtttcaaaatacatgtccaa 42761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 43092981 - 43093026
Alignment:
Q  65 tcattaattattgtatactattttcgagattttttgtgtctttatc 110  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||||    
T  43092981 tcattaattattgtatactcttttcaaaaatttttgtgtctttatc 43093026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 27033672 - 27033608
Alignment:
Q  57 tcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    ||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  27033672 tcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 27033608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 36881282 - 36881310
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  36881282 tactccctccgtttcaaaatacatgtcca 36881310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 100910 - 100769
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  100910 atactccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaat 100811  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  100810 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 100769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 100647 - 100676
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  100647 tactccctccgtttcaaaatacatgtccaa 100676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 16778502 - 16778645
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  16778502 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaa 16778601  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  16778602 atattagcatgtaagatgttgtttgatttgtctcgacaaatatt 16778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 188 - 334
Target Start/End: Original strand, 47156021 - 47156167
Alignment:
Q  188 ttttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaata 287  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  47156021 ttttattactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaata 47156120  T
Q  288 caaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  47156121 caaatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 47156167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 28061778 - 28061637
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  28061778 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 28061679  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  28061678 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 28061637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 36623308 - 36623448
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  36623308 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 36623407  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  36623408 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 36623448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 20885103 - 20885243
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 20885202  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  20885203 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 20885243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 200 - 334
Target Start/End: Original strand, 40256063 - 40256197
Alignment:
Q  200 ctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcg 299  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||     
T  40256063 ctccgtttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 40256162  T
Q  300 tgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||||||||||||||||||    
T  40256163 tgtaagatgttgtttgatttgtctcgacaaatatt 40256197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 38852110 - 38851969
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  38852110 atactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 38852011  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  38852010 attagcatgtaagatattgtttgatttgtctcgacaaatatt 38851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 41897987 - 41898128
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  41897987 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaat 41898086  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  41898087 attagcatgtaagatgttgtttcatttgtctcgacaaatatt 41898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 42890605 - 42890465
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  42890605 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaata 42890506  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  42890505 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 42890465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 48602436 - 48602576
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  48602436 tactccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 48602535  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  48602536 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 48602576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 32431620 - 32431480
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  32431620 tactccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 32431521  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||  ||||||||||||||||||||||||||| |||||||    
T  32431520 ttagtatgtaagatgttgtttgatttgtctcgataaatatt 32431480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 36585109 - 36585249
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| || ||| |||| ||||||||||||||||||||||    
T  36585109 tacttcctccgtttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaata 36585208  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  36585209 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 36585249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 40090180 - 40090040
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  40090180 tactccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 40090081  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  40090080 ttagcatgtaagatgttgtttgatttatctcgacaaatatt 40090040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 192 - 334
Target Start/End: Original strand, 44732010 - 44732152
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||| || | ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  44732010 aatactcacttcattttaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaa 44732109  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  44732110 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 44732152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 39130188 - 39130048
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||| ||||||||| |  || ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  39130188 tactccatccgttttaaaatacatctttaatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaata 39130089  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  39130088 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 39130048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 7438908 - 7439043
Alignment:
Q  199 cctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagc 298  Q
    |||| ||||||||||||||||| || ||||||||| |||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  7438908 cctctgtttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagc 7439007  T
Q  299 gtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     |||||||||||||||||||||||||||||||||||    
T  7439008 atgtaagatgttgtttgatttgtctcgacaaatatt 7439043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 203 - 334
Target Start/End: Original strand, 46479838 - 46479969
Alignment:
Q  203 cgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgt 302  Q
    |||||||||||||||||  || |||| ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  46479838 cgtttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgt 46479937  T
Q  303 aagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||||    
T  46479938 aagatgttgtttgatttgtctcgacaaatatt 46479969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 25566811 - 25566670
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  25566811 aatactctctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaa 25566713  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||    
T  25566712 tattagcatgtgagatgttgtttgatttgtctcaacaaatatt 25566670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 35117125 - 35117265
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||    
T  35117125 atactccctccgttttaaaatacctgttcaatttttgcaatatgcactattcacttgacttactttgaccatactttt-aactaatgtataaatataaat 35117223  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  35117224 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 35117265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 330
Target Start/End: Original strand, 42877386 - 42877522
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||| | || |||||||||||| ||| ||||||||||||||||||||| |||||    
T  42877386 tactccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaata 42877485  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaa 330  Q
    ||||  ||||||||||||||||||||||||| |||||    
T  42877486 ttagaatgtaagatgttgtttgatttgtctctacaaa 42877522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 7457983 - 7457864
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| |||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  7457983 tactccatccgtttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaata 7457885  T
Q  294 ttagcgtgtaagatgttgttt 314  Q
    ||||| |||||||||||||||    
T  7457884 ttagcatgtaagatgttgttt 7457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 46103625 - 46103492
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||       |||||||||||||| ||| |||||||||||| ||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcact-------tgacttactttgaccatactttttaactaatatataaatacaaata 46103533  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  46103532 ttagcatgtaagatgttgtttgatttgtttcgacaaatatt 46103492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 201 - 334
Target Start/End: Original strand, 30342081 - 30342214
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||||| ||||||||||  ||| |||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||  |    
T  30342081 tccgttttaaaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtat 30342180  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||| |||||||||||||||| |||||||    
T  30342181 gtaagatgtcgtttgatttgtctcgataaatatt 30342214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 41088587 - 41088727
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||| ||||||||||||||||||| |||| |||| |||||| ||||  |||||||||||||| ||| |||||||||||||||||||| ||||||    
T  41088587 tactccctccatttcaaaatacatgtccaaattttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaata 41088686  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||| | ||||||||||||  |||||||||||||||||||||    
T  41088687 ttaacatgtaagatgttgcatgatttgtctcgacaaatatt 41088727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 41134745 - 41134610
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||| ||||||||||| ||| |||| ||||||| |||||||| ||||||||||||||| |||     |||||||||||||||||||||||    
T  41134745 tactccatccgttttaaaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaata 41134651  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  41134650 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 41134610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 201 - 334
Target Start/End: Original strand, 3851084 - 3851214
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||| |||||||| |||||||| ||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |      
T  3851084 tccgtctcaaaatatatgtccaatttttgcaatgtgca---ttcacttgacttactttgacaatactttttaactaatgtataaatacaaatattaacac 3851180  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||| |||||||||||    
T  3851181 gtaagatattgtttgatttgtcccgacaaatatt 3851214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 8683818 - 8683955
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| | ||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  8683818 tactccattcgttttaaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaata 8683917  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||    |||||||||||||||||||||| |||||||||    
T  8683918 ttagc---aaagatgttgtttgatttgtctcaacaaatatt 8683955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 11502832 - 11502702
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    |||||||||||||||||||| ||||| |||||||| |||| |||| |||||||||||  ||| |||||||||||||||||||||||||||||||| ||||    
T  11502832 gtttcaaaatacatgtccaatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 11502733  T
Q  304 agatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||  |||||||||    
T  11502732 agatgtcgtttgatttgtctaaacaaatatt 11502702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 192 - 326
Target Start/End: Complemental strand, 6766814 - 6766680
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||||||||||||||||||||||||  | |||| |||| |||| ||||||| | ||||| |||||| ||| |||||||||||||||||||| ||||    
T  6766814 aatactccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaa 6766715  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    | ||||| |||||||||||||||||||||||||||    
T  6766714 tgttagcatgtaagatgttgtttgatttgtctcga 6766680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 46322227 - 46322127
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  46322227 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaata 46322128  T
Q  294 t 294  Q
    |    
T  46322127 t 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 5788629 - 5788499
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    |||| |||||||||||| || |||||  ||| |||||||||| |||||||||||| |  ||| ||||| |||||||||||||||||||||||||  ||||    
T  5788629 gtttaaaaatacatgtctaatttttgtgatgagcactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgta 5788530  T
Q  304 agatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||||||||||||||    
T  5788529 agatgttgtttgatttgtctcgacaaatatt 5788499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 2198601 - 2198742
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||| |||||| ||||  ||  ||||||||||| ||||||||  ||| ||| |||||  ||| ||||||||||||||||||||||||||    
T  2198601 atactccctccgttttaaaatagatgtgtaatatttgcaatgtgtactattcatctgatttattttgaacatactttttaactaatgtataaatacaaat 2198700  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||| |  ||||||||||||||||||||||||||||||||||    
T  2198701 attaacaagtaagatgttgtttgatttgtctcgacaaatatt 2198742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 201 - 310
Target Start/End: Original strand, 6174843 - 6174952
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    |||||||||||||| |||||||| |||||||| |||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||| |||||| |    
T  6174843 tccgtttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcat 6174942  T
Q  301 gtaagatgtt 310  Q
    ||||||||||    
T  6174943 gtaagatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 4131758 - 4131635
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    |||||||||||||| |||||  | |||| ||||||  ||||||||| | ||||||||| || ||| |||||||||||| ||||||||||||  ||||| |    
T  4131758 tccgtttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagcat 4131659  T
Q  301 gtaagatgttgtttgatttgtctc 324  Q
    ||||||||||||||||||||||||    
T  4131658 gtaagatgttgtttgatttgtctc 4131635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 21379817 - 21379884
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21379817 tttttagctaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 21379884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 36341620 - 36341747
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| | ||||||||||||||||||  | |||||||||||||||||||||| ||||||| ||| || ||| |||||||||||  |||||||| ||||     
T  36341620 tactccattcgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatg 36341719  T
Q  294 ttagcgtgtaagatgttgtttgatttgt 321  Q
    ||||  |||||||||||||| |||||||    
T  36341720 ttagaatgtaagatgttgttcgatttgt 36341747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 35570316 - 35570171
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaata-----atttttaactaatgtataaatac 288  Q
    ||||| |||||||||||||||||||||  | |||| |||||||||||||||||   |||||||||||| |||      |||||||||||| || ||||||    
T  35570316 tactcactccgtttcaaaatacatgtcgcaattttacaatgtgcactattcacaaaacttactttgaccatatttttttttttaactaatatacaaatac 35570217  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||| ||||| |||||||||||||  |||||||||||| |||||||    
T  35570216 aaattttagcatgtaagatgttgtacgatttgtctcgataaatatt 35570171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 40019710 - 40019605
Alignment:
Q  49 taaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggag 148  Q
    ||||||||||||| |||||||||||| | |||||| ||||| ||||||||||||| ||||||| || |||| | ||||||||||| ||||||||| ||||    
T  40019710 taaatgagtcccaccatcattaattactttatacttttttcaagattttttgtgtttttatctctccaaatggaggaaattgagacaattgtaaa-ggag 40019612  T
Q  149 aggatct 155  Q
    |||||||    
T  40019611 aggatct 40019605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 310
Target Start/End: Original strand, 7169133 - 7169242
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||||||||||||||||||  | ||||||||||||   ||||||| ||| |||||||||| ||| |||||||||||| ||||||||||||||||| | |    
T  7169133 tccgtttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaatattaacat 7169232  T
Q  301 gtaagatgtt 310  Q
     |||||||||    
T  7169233 ataagatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 23707614 - 23707545
Alignment:
Q  265 aatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  23707614 aatttttaactaatgtataaatacaaatattagcatgtgagatattatttgatttgtctcgacaaatatt 23707545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 326
Target Start/End: Complemental strand, 27045663 - 27045538
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    |||||||||||||||||||   | |||| ||||||  ||||||||| ||  |||||||||| ||| |||||||||||| ||||||||||||| ||||| |    
T  27045663 tccgtttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgttagcat 27045564  T
Q  301 gtaagatgttgtttgatttgtctcga 326  Q
     ||||||||||||| ||||| |||||    
T  27045563 ataagatgttgtttaatttgcctcga 27045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 201 - 324
Target Start/End: Original strand, 5529018 - 5529141
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||||||||||||||||||| | |||| |||||| ||||||| || |   ||| |||||| ||| |||||||||||| || ||||| |||| ||||| |    
T  5529018 tccgtttcaaaatacatgtcctaattttacaatgtacactatttacgtagattattttgactatattttttaactaatatacaaataaaaatgttagcat 5529117  T
Q  301 gtaagatgttgtttgatttgtctc 324  Q
    |||||||||| |||||||||||||    
T  5529118 gtaagatgttatttgatttgtctc 5529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 334
Target Start/End: Original strand, 26161599 - 26161739
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    ||||||| ||||||||||||||||  | || |  |||| ||||||||||| ||| ||| |||||| ||  |||||||||||| |||||||||||||||||    
T  26161599 tccctccatttcaaaatacatgtcacatttgtataatgcgcactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatatta 26161698  T
Q  297 gcgtgtaagatgtt---gtttgatttgtctcgacaaatatt 334  Q
    || ||||| |||||    ||||||||||||| | |||||||    
T  26161699 gcatgtaaaatgttataatttgatttgtctcaataaatatt 26161739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 3785520 - 3785660
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||| ||||||||||||||||||| ||  | |||  |||| |||||||||||  |   |||||||||| ||| |||||||||||| |||||||||||||     
T  3785520 tacttcctccgtttcaaaatacatatcataatttcacaatatgcactattcatatagtttactttgaccatattttttaactaatatataaatacaaatg 3785619  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||  |  | ||||||||||||||||||| || |||||||    
T  3785620 ttagtatacaggatgttgtttgatttgtctagataaatatt 3785660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 42662185 - 42662284
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||| | ||||||||||||||||||||  | |||||||||||| | ||||||| |  ||||||||||| ||| |||||||||||| ||||||||||||    
T  42662185 aatacttcttccgtttcaaaatacatgtcgcaattttgcaatgtgtattattcacatt-cttactttgaccatactttttaactaatatataaatacaaa 42662283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 16870743 - 16870610
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||| |||| ||| |||||||||||||    |||| |||| |||||||||||  | |||||||||||| ||| || ||||||||| |||||||| ||||    
T  16870743 atacttcctctgttccaaaatacatgtcgcggttttacaatatgcactattcaaataacttactttgaccatatttgttaactaatatataaatataaat 16870644  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcga 326  Q
     || ||  |||| ||||| |||||||||||||||    
T  16870643 gtttgcacgtaaaatgttatttgatttgtctcga 16870610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 49110732 - 49110607
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||| ||||||||||||  | ||||  |||||| ||||||||  ||| |||||||||| ||| |||||||||||| ||| |||||||||     
T  49110732 tactccatccgttttaaaatacatgtcacaattttataatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatg 49110633  T
Q  294 ttagcgtgtaagatgttgtttgattt 319  Q
    |||   ||||| || |||||||||||    
T  49110632 ttatgatgtaaaatattgtttgattt 49110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 326
Target Start/End: Complemental strand, 49102063 - 49101943
Alignment:
Q  206 ttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaag 305  Q
    ||||||||||||||   | |||| |||| |||||||||||  | ||||| |||    ||| ||||||||||||  |||||||||||| || || ||||||    
T  49102063 ttcaaaatacatgttacaattttacaatatgcactattcatataacttatttttgtcatattttttaactaatacataaatacaaatttttgcatgtaag 49101964  T
Q  306 atgttgtttgatttgtctcga 326  Q
    |||||||||||||||||||||    
T  49101963 atgttgtttgatttgtctcga 49101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 45331915 - 45332057
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtat-----aaatac 288  Q
    ||||||||||||||||||| ||||||   | ||||||||| |||| ||||||  |||||||||||||| ||| ||||||||  | ||||     | |||     
T  45331915 tactccctccgtttcaaaacacatgt---atttttgcaatatgcattattcatatgacttactttgaccatattttttaacacacgtatatataatatat 45332011  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| | | |||||||||||||||||||||||| || |||||||    
T  45332012 aaatatgaacttgtaagatgttgtttgatttgtcttgataaatatt 45332057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 46480016 - 46480059
Alignment:
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  46480016 atattaacatgtaagatgttgtttgatttgtctcgacaaatatt 46480059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 25566543 - 25566577
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||||    
T  25566543 tttaatactccctccgtttcaaaatacatgtccaa 25566577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 36515839 - 36515969
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||   |||||||||||  | |||  ||||||| |||||||||   ||||||||| || ||| |||||||  ||| |||||||||||||     
T  36515839 tactccctccgttcgtaaatacatgtcgcaatttaacaatgtgtactattcacacaacttactttaaccatattttttaatcaatatataaatacaaatg 36515938  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||  | ||||||||||||  |||||||||    
T  36515939 ttagtatataagatgttgttcaatttgtctc 36515969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 4048923 - 4048871
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgattt 319  Q
    |||||||||||| |||||||||||||  |||| |||||| |||||||||||||    
T  4048923 tttttaactaatatataaatacaaatgctagcttgtaagttgttgtttgattt 4048871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 25060190 - 25060158
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||||    
T  25060190 ttaatactccctccgtttcaaaatacatgtcca 25060158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 28061512 - 28061544
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  28061512 taatactccctccgtttcaaaatacatgtccaa 28061544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 37467511 - 37467444
Alignment:
Q  252 ttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttg 320  Q
    ||||||| || ||| |||||||||||| ||||||||||||| ||||| | |||||| ||||||||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcatttaagat-ttgtttgatttg 37467444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 41898253 - 41898221
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  41898253 taatactccctccgtttcaaaatacatgtccaa 41898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 46321322 - 46321274
Alignment:
Q  286 tacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||| ||||||||||| |||||||||||| || |||||||    
T  46321322 tacaaatattagcatgtaagatgttatttgatttgtcttgataaatatt 46321274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 47156292 - 47156260
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  47156292 taatactccctccgtttcaaaatacatgtccaa 47156260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 47526025 - 47525969
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtct 323  Q
    |||||||||||| ||||||||||||| ||||| | |||||| ||||| |||||||||    
T  47526025 tttttaactaatatataaatacaaatgttagcatttaagatcttgttcgatttgtct 47525969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 27813808 - 27813839
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||||    
T  27813808 taatactccctccgtttcaaaatacatgtcca 27813839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 38767265 - 38767202
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtt 313  Q
    |||||||||||| ||| |||||||||||| ||||||||||||| | ||  | ||||||||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgttgtt 38767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 10981507 - 10981536
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  10981507 atactccctccgtttcaaaatacatgtcca 10981536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 21151174 - 21151109
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  21151174 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 21151109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 36623570 - 36623541
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  36623570 tactccctccgtttcaaaatacatgtccaa 36623541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 46103370 - 46103399
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  46103370 tactccctccgtttcaaaatacatgtccaa 46103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 2952421 - 2952521
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaata-atttttaactaatgtataaatacaaa 291  Q
    ||||||| ||||||||||||||| |||   | |||| ||| ||||| ||||||| |  ||||||||||| |||  |||||||||||| |||||||| |||    
T  2952421 atactccatccgtttcaaaatacgtgttgcaattttacaacgtgcattattcacgtagcttactttgaccatatttttttaactaatttataaatataaa 2952520  T
Q  292 t 292  Q
    |    
T  2952521 t 2952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 4705380 - 4705432
Alignment:
Q  36 tgaatgctttcaataaatgagtcccatcatcattaattattgtatactatttt 88  Q
    |||||||||| ||||||| ||| ||| ||||||||| ||||||||||| ||||    
T  4705380 tgaatgcttttaataaataagttccaccatcattaactattgtatactctttt 4705432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 7362597 - 7362525
Alignment:
Q  49 taaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| || ||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  7362597 taaatgggttccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 7362525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 34750550 - 34750618
Alignment:
Q  242 ttcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgtt 310  Q
    ||||| ||||||||||||||  || |||||||||||| || ||||| |||| ||| | |||||||||||    
T  34750550 ttcacatgacttactttgaccctactttttaactaatatacaaataaaaatgttaacatgtaagatgtt 34750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 45260481 - 45260545
Alignment:
Q  57 tcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||||||||||||||||  | |||| ||||  ||||||| ||||||||||||| || ||||||    
T  45260481 tcccatcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattg 45260545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 48602697 - 48602669
Alignment:
Q  195 actccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||    
T  48602697 actccctccgtttcaaaatacatgtccaa 48602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 32671813 - 32671956
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  32671813 taatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaa 32671912  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32671913 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 32671956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 18668951 - 18668810
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  18668951 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaat 18668852  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  18668851 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 18668810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 189 - 334
Target Start/End: Complemental strand, 32414946 - 32414801
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatac 288  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||    
T  32414946 tttaatactccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatac 32414847  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  32414846 aaatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 32414801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 4147928 - 4148071
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  4147928 taatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaa 4148027  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| ||||||||||||||||||||| |||||||||||||    
T  4148028 atattagcatgtaagatgttgtttgatttgcctcgacaaatatt 4148071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 19088221 - 19088080
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | |||||||||||| |||||||||||||    
T  19088221 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaat 19088122  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  19088121 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 19088080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 22054772 - 22054912
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  22054772 tactctctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 22054871  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  22054872 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 22054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 6563226 - 6563366
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  6563226 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaata 6563325  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  6563326 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 6563366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 24624203 - 24624063
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  24624203 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 24624104  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  24624103 ttagcatgtaagatgttgtttgatttgtctcggcaaatatt 24624063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 189 - 334
Target Start/End: Complemental strand, 17214051 - 17213906
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatac 288  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  17214051 tttaatactccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatac 17213952  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||    
T  17213951 aaatattagcatgtaagatgttgtttgatttgtctccacaaatatt 17213906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 190 - 334
Target Start/End: Complemental strand, 20226564 - 20226420
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    ||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  20226564 ttaatactccctatgtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataca 20226465  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  20226464 aatattagcatgtaagacgttgtttgatttgtctcgacaaatatt 20226420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 190 - 334
Target Start/End: Complemental strand, 22120548 - 22120404
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    ||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  22120548 ttaatactccctatgtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataca 22120449  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  22120448 aatattagcatgtaagacgttgtttgatttgtctcgacaaatatt 22120404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 17257915 - 17257773
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||| || ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  17257915 aatactccatctgtttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaa 17257816  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  17257815 tattagcatgtaagatgttgtttgatttgtctagacaaatatt 17257773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 334
Target Start/End: Complemental strand, 3989518 - 3989386
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||| |    
T  3989518 tccgttacaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcat 3989420  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||||||    
T  3989419 gtaagatgttgtttgatttgtctcgacaaatatt 3989386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 201 - 334
Target Start/End: Complemental strand, 15383185 - 15383052
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| || ||| |||||||||||| ||||||||||||||||||| |    
T  15383185 tccgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcat 15383086  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||| ||||||||||||||    
T  15383085 gtaagatgttgtttgatttttctcgacaaatatt 15383052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 189 - 334
Target Start/End: Complemental strand, 25476075 - 25475935
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatac 288  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  || |||||||||||||||||||||     
T  25476075 tttattactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata- 25475977  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
        |||||| |||||||||||||||||||||||||||||||||||    
T  25475976 ----attagcatgtaagatgttgtttgatttgtctcgacaaatatt 25475935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 1040855 - 1040964
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  1040855 ttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtctc 1040954  T
Q  325 gacaaatatt 334  Q
    ||||||||||    
T  1040955 gacaaatatt 1040964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 20437279 - 20437135
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttt-aactaatgtataaataca 289  Q
    ||||||||| |||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  20437279 taatactccatccgttttcaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaataca 20437180  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| | | ||||||||||||||||||||| |||||||||||||    
T  20437179 aatatcaacatgtaagatgttgtttgatttgcctcgacaaatatt 20437135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 24955654 - 24955518
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||||||||||||||||||      | || ||||| |||||||| ||||||||||||||| |||||  ||| ||||||||||||| |||||||||||    
T  24955654 aatactccctccgtttcaaaat------ctaatttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaa 24955561  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  24955560 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 24955518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 10520468 - 10520608
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||||||||||||||| ||| |||||||||||| | |||||| ||||||||||||||| |||  | |||||||||||||||||||| |||    
T  10520468 tactccttccgtttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagata 10520567  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||   ||||| ||||||||||||||||||||| |||||||    
T  10520568 ttaatatgtaaaatgttgtttgatttgtctcgataaatatt 10520608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 28477764 - 28477892
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    ||||||||||||||||  | |||||||||||| ||||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  28477764 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgtaa 28477863  T
Q  305 gatgttgtttgatttgtctcgacaaatat 333  Q
    | ||||||||||||| | |||| ||||||    
T  28477864 gttgttgtttgatttatatcgataaatat 28477892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 29790205 - 29790345
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| || |||||||||||||||||  | |||||||||||  ||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||    
T  29790205 atactccatctgtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaat 29790304  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatat 333  Q
    |||||| |||||| ||||||||||||| | |||| ||||||    
T  29790305 attagcatgtaagttgttgtttgatttatatcgataaatat 29790345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 31569280 - 31569175
Alignment:
Q  202 ccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtg 301  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||||  ||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatg 31569181  T
Q  302 taagat 307  Q
    ||||||    
T  31569180 taagat 31569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 29693894 - 29694022
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    ||||||||||||||||  | |||||||||||| ||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||| |||| |||||    
T  29693894 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgtaa 29693993  T
Q  305 gatgttgtttgatttgtctcgacaaatat 333  Q
    | ||||| ||||||||| |||| ||||||    
T  29693994 gttgttgcttgatttgtatcgataaatat 29694022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 21540880 - 21540751
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    |||||||||||||||  || |||| |||||||||||||||| ||||||||||||||| ||| |||| ||||| | |||||||||||||||||   |||||    
T  21540880 tttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaa 21540781  T
Q  305 gatgttgtttgatttgtctcgacaaatatt 334  Q
     ||||| |||||||||||||||||||||||    
T  21540780 aatgttatttgatttgtctcgacaaatatt 21540751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 12225986 - 12226115
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    ||||||||||||| || || ||||   ||| || ||||||||| |||||| |||||  ||| ||||||||||||||||||||| |||||||||| |||||    
T  12225986 tttcaaaatacatatctaatttttatgatgcgcgctattcactggacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaa 12226085  T
Q  305 gatgttgtttgatttgtctcgacaaatatt 334  Q
    ||| |||||||||||||||||| |||||||    
T  12226086 gatattgtttgatttgtctcgataaatatt 12226115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 15337484 - 15337608
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    |||||||| | || |||||||||||||| ||  | |||| |||| |||| ||||||| | |||||||||||| ||| |||||||||||| ||||||||||    
T  15337484 ttaatacttcatctgtttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaataca 15337583  T
Q  290 aatattagcgtgtaagatgttgttt 314  Q
    ||||||||| ||||| |||||||||    
T  15337584 aatattagcatgtaaaatgttgttt 15337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 334
Target Start/End: Original strand, 4440851 - 4440990
Alignment:
Q  195 actccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatat 294  Q
    |||| ||||||||||||||| ||||   | ||||| |||||||||||||||  | |||||||||||| ||| ||||||  |||  ||||||||||||| |    
T  4440851 actctctccgtttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgt 4440950  T
Q  295 tagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||| |||||||||||||| ||||||| |||| |||||||    
T  4440951 tagcatgtaagatgttgttcgatttgtttcgataaatatt 4440990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 323
Target Start/End: Original strand, 2360048 - 2360119
Alignment:
Q  252 ttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtct 323  Q
    |||||||||| |||||||||||||||| |||||||| |||| ||||| ||||| ||||||||||||||||||    
T  2360048 ttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgtttgatttgtct 2360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 23158115 - 23158041
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||| | | |||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 23158041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 31869714 - 31869824
Alignment:
Q  200 ctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcg 299  Q
    |||||||||||||||||||||    |||| |||||| |||||||| | | | |||||||||| ||  |||||||||||| ||||||||||||| |||||     
T  31869714 ctccgtttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagca 31869813  T
Q  300 tgtaagatgtt 310  Q
    |||||||||||    
T  31869814 tgtaagatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 10298798 - 10298703
Alignment:
Q  231 aatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    |||||||||||||||| |  |||| |||||| ||| ||||| |||||| ||||||||||||| ||||| ||||| ||||| |||||||| ||||||    
T  10298798 aatgtgcactattcacatagcttaatttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgttttttgatttttctcga 10298703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 16193053 - 16193004
Alignment:
Q  285 atacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  16193053 atacaaatattagcatgtaagatgttgtttgatttgtctcaacaaatatt 16193004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 334
Target Start/End: Original strand, 17155158 - 17155289
Alignment:
Q  203 cgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgt 302  Q
    ||||||||||||||||||    ||||  ||||| |||||||||| |||| ||||||||  ||| ||  |||||||  ||||||||||||| ||||| |||    
T  17155158 cgtttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgt 17155257  T
Q  303 aagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||  |||||| || | |||||||    
T  17155258 aagatgttgttcaatttgtttcaaaaaatatt 17155289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 236183 - 236071
Alignment:
Q  43 tttcaataaatgagtcccatcatcattaattattgtatactattttcgagat--tttttgtgtctttatctttctaaattgcggaaattgagagaattgt 140  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |||||  |||  ||||||| | |||||||||  ||||   | ||||  ||||||||||    
T  236183 tttcaataaatgagtcccaccatcattaactattgtatact-ttttcaggattctttttgtttgtttatcttttcaaatgaagaaaatgaagagaattgt 236085  T
Q  141 aaatggagaggatc 154  Q
    ||||||||||||||    
T  236084 aaatggagaggatc 236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 19240823 - 19240753
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatt 295  Q
    |||||||||||  ||||||||| | ||||| |||||| ||| |||||||||||| ||||||||||||||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatt 19240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 16193101 - 16193052
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactat 242  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  16193101 atactccctccattttaaaatacatgtccaatttttgcaatgtgcactat 16193052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 5495322 - 5495374
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgattt 319  Q
    |||||||||||| ||||||||||||| ||||| |||||||| |||||||||||    
T  5495322 tttttaactaatatataaatacaaatgttagcatgtaagattttgtttgattt 5495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 18668681 - 18668717
Alignment:
Q  187 attttaatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||||||    
T  18668681 attttaatactccctccgtttcaaaatacatgtccaa 18668717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 1249199 - 1249298
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatct 155  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| |||||||||||||||| ||||||  ||||| |||| |    ||||||||||||||||    
T  1249199 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctttccaaattgaagaaatggagaaacacataaatggagaggatct 1249298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 8101664 - 8101727
Alignment:
Q  258 tgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgt 321  Q
    |||| ||| |||||||||||| ||||||||||||| ||| | ||||||||||| ||||||||||    
T  8101664 tgaccatattttttaactaatatataaatacaaatgttaacatgtaagatgttatttgatttgt 8101727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 32420787 - 32420748
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaactttt 228  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  32420787 tttaatactccctccgtttcaaaatacatgtccaattttt 32420748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 310
Target Start/End: Complemental strand, 3623913 - 3623856
Alignment:
Q  252 ttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgtt 310  Q
    |||||||||| ||| |||||||||||| ||||||||||||| ||||| |||||||||||    
T  3623913 ttactttgaccata-tttttaactaatatataaatacaaatgttagcatgtaagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 220
Target Start/End: Complemental strand, 19996773 - 19996742
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtc 220  Q
    ||||||||||||||||||||||||||||||||    
T  19996773 tttaatactccctccgtttcaaaatacatgtc 19996742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 4804470 - 4804372
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    |||||| |||||||||||||  | |||| ||||| | ||||| ||||||||||||| || ||||||  ||||| |||| |  | |||||||||||||||    
T  4804470 gtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatc 4804372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 7162106 - 7162008
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||  ||||| |||| |   |||||| |||||||||    
T  7162106 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacgtaaatagagaggatc 7162008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 15064973 - 15064943
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||    
T  15064973 aatactccctccgtttcaaaatacatgtcca 15064943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 19087957 - 19087987
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  19087957 atactccctccgtttcaaaatacatgtccaa 19087987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 20437016 - 20437046
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  20437016 atactccctccgtttcaaaatacatgtccaa 20437046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 24623940 - 24623970
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  24623940 atactccctccgtttcaaaatacatgtccaa 24623970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 1605578 - 1605607
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  1605578 atactccctccgtttcaaaatacatgtcca 1605607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 7761300 - 7761329
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  7761300 atactccctccgtttcaaaatacatgtcca 7761329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 17398699 - 17398838
Alignment:
Q  9 aatgagatgaacacaaaaaagagaaagtgaatgctttcaataaatgagtcccatcatcattaatta--ttgtatactattttcgagattttttgtgtctt 106  Q
    ||||||||  |||||||||||||| |||| ||  ||| | ||||||  ||||| ||| ||||||||  ||||||  | ||||| ||||||| ||||||||    
T  17398699 aatgagatagacacaaaaaagagatagtggatattttaattaaatggatcccaccataattaattactttgtatttt-ttttcaagattttatgtgtctt 17398797  T
Q  107 tatctttctaaattgcggaaattgagagaattgtaaatgga 147  Q
    ||||| || |||| | |||||  |||| |||||||||||||    
T  17398798 tatctctccaaatggaggaaagggagacaattgtaaatgga 17398838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 19996321 - 19996350
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  19996321 atactccctccgtttcaaaatacatgtcca 19996350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 22055034 - 22055005
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  22055034 tactccctccgtttcaaaatacatgtccaa 22055005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 29260191 - 29260220
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  29260191 atactccctccgtttcaaaatacatgtcca 29260220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 320
Target Start/End: Complemental strand, 7049128 - 7048998
Alignment:
Q  194 tactccctccgtttcaaaatacatgtc-caacttttgcaatgtgcactattcacttgacttactttgacaataattttt---aactaatgtataaataca 289  Q
    |||||||||  ||||||||||||| |  ||| |||| || |||||||| ||||| | |||||||||||| ||| |||||   || || | ||||||||||    
T  7049128 tactccctcaatttcaaaatacatatggcaatttttacattgtgcactgttcacataacttactttgaccatatttttttttaattattatataaataca 7049029  T
Q  290 aatattagcgtgtaagatgttgtttgatttg 320  Q
    ||| ||| | | |||||||||| ||||||||    
T  7049028 aatgttaccatataagatgttggttgatttg 7048998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 8626482 - 8626510
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  8626482 tactccctccgtttcaaaatacatgtcca 8626510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 30701717 - 30701858
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30701717 atactccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaat 30701816  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30701817 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 30701858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 36399098 - 36399238
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  36399098 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaata 36399197  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36399198 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 36399238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 52024023 - 52024166
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||    
T  52024023 taatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataa 52024122  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  52024123 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 52024166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 189 - 334
Target Start/End: Complemental strand, 6402677 - 6402532
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatac 288  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  6402677 tttaatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatac 6402578  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  6402577 aaatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 6402532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 11641330 - 11641189
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  11641330 atactccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 11641231  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  11641230 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 11641189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 40772035 - 40771894
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  40772035 atactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaat 40771936  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  40771935 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 40771894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 192 - 334
Target Start/End: Original strand, 17305952 - 17306094
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||    
T  17305952 aatactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaa 17306051  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  17306052 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 17306094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 30003532 - 30003673
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  30003532 atactccatccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 30003631  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  30003632 attagcatgtaagatgttgtttgatttgtcttgacaaatatt 30003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 36757749 - 36757608
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  36757749 atactccatccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 36757650  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  36757649 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 36757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 189 - 334
Target Start/End: Complemental strand, 42788809 - 42788664
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatac 288  Q
    ||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  42788809 tttaatactccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatac 42788710  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  42788709 aaatatttgcatgtaagatgttgtttgatttgtctcgacaaatatt 42788664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 16120702 - 16120562
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  16120702 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 16120603  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||| ||||| ||||    
T  16120602 ttagcatgtaagatgttgtttgatttgtcttgacaagtatt 16120562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 24321258 - 24321401
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaata--atttttaactaatgtataaatacaa 290  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||||| |||  |||||||||||||||||||||||||    
T  24321258 atactccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaa 24321357  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| |||||||| ||||||||||||||||||||||||||    
T  24321358 atattagcatgtaagatattgtttgatttgtctcgacaaatatt 24321401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 40977746 - 40977610
Alignment:
Q  198 ccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattag 297  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  40977746 ccctccgttgcaaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattag 40977647  T
Q  298 cgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    | |||||||||||||||||||||||| ||||||||||    
T  40977646 catgtaagatgttgtttgatttgtcttgacaaatatt 40977610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 6766371 - 6766509
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  6766371 atactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 6766470  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||   |||||||||||||||||||||||||    
T  6766471 attagcatgtaaga---tgtttgatttgtctcgacaaatatt 6766509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 196 - 334
Target Start/End: Original strand, 27292642 - 27292780
Alignment:
Q  196 ctccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatt 295  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||    
T  27292642 ctccctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaatatt 27292741  T
Q  296 agcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||| ||||||||||| |||||||||||||||||||||||    
T  27292742 agcatgtaagatgttatttgatttgtctcgacaaatatt 27292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 9342907 - 9342767
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| |||||||||||| ||||||| || |||||||||||||  |||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  9342907 tactccatccgtttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaata 9342808  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  9342807 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 9342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 42735432 - 42735287
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttt---aactaatgtataaatac 288  Q
    |||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||| |||||   ||||||| |||||||||    
T  42735432 aatactccatccgtttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatac 42735333  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||    
T  42735332 aaatattagcatgtaagatgatgtttgatttgtctcgacaaatatt 42735287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 197 - 334
Target Start/End: Original strand, 26910079 - 26910216
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    ||||||| ||| |||||||||||  || ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  26910079 tccctccattttaaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 26910178  T
Q  297 gcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     | || |||||| ||||| |||||||| ||||||||||    
T  26910179 acatgcaagatgatgtttaatttgtcttgacaaatatt 26910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 207 - 334
Target Start/End: Complemental strand, 15912585 - 15912458
Alignment:
Q  207 tcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaaga 306  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||| | | || | ||||||||||||||||| |||||||    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaaga 15912486  T
Q  307 tgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||| |||||||    
T  15912485 tgttgtttgatttgtctcgataaatatt 15912458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 4302115 - 4302255
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    |||||||| |||||||| | ||||||||| ||| ||||||||||| ||||||| |||||||||||||||| |||  ||||||||||||||||||||| ||    
T  4302115 taatactcgctccgttttataatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataa 4302214  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| |||||||   |||||||||||| ||||||||||||    
T  4302215 atattagcatgtaaga---tgtttgatttgtttcgacaaatatt 4302255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 42367513 - 42367418
Alignment:
Q  239 ctattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||||||||||||||    
T  42367513 ctattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagatgttatttgatttgtctcgacaaatatt 42367418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 15382682 - 15382556
Alignment:
Q  200 ctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcg 299  Q
    |||||||||||||||||||||  | |||| |||||| |||||||||| | ||||||| |||| |   ||||||| |||| ||||||||||||||||||      
T  15382682 ctccgtttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagta 15382583  T
Q  300 tgtaagatgttgtttgatttgtctcga 326  Q
    |||||||||||||||||||||| ||||    
T  15382582 tgtaagatgttgtttgatttgtttcga 15382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 334
Target Start/End: Original strand, 48375018 - 48375143
Alignment:
Q  210 aaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgt 309  Q
    ||||| |||| ||| ||||||||||| || ||||||||| ||||| |||||  ||| |||||||||||| ||||||||||||||||||| |||||||  |    
T  48375018 aaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaagacat 48375117  T
Q  310 tgtttga-tttgtctcgacaaatatt 334  Q
    ||||||| ||| ||||||||||||||    
T  48375118 tgtttgattttttctcgacaaatatt 48375143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 334
Target Start/End: Complemental strand, 28030934 - 28030803
Alignment:
Q  203 cgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgt 302  Q
    |||||||||||||||||   | |||||||||||||| |||| || ||||||| |||||| ||| |||||||||||  ||||||||||||| ||||| |||    
T  28030934 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgt 28030835  T
Q  303 aagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||  |||||| |||| |||||||    
T  28030834 aagatattgttcaatttgtttcgataaatatt 28030803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 326
Target Start/End: Complemental strand, 3485459 - 3485337
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    |||| ||||||||||||  | |||| |||| |||||||||| | | |||||||||||  ||| |||||||||||| ||||||||||||| ||| | ||||    
T  3485459 gttttaaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgta 3485360  T
Q  304 agatgttgtttgatttgtctcga 326  Q
    || ||||||||||||||||||||    
T  3485359 aggtgttgtttgatttgtctcga 3485337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 38153528 - 38153399
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    ||||||||||||||||  | ||||  |||||||||||||||| ||||||||| | || ||| |||||||||||  ||||||||||||| ||| | |||||    
T  38153528 tttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaa 38153429  T
Q  305 gatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| || ||||||| |||| |||||||    
T  38153428 gatgttcttcgatttgtttcgataaatatt 38153399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 40800649 - 40800517
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttt-aactaatgtataaatacaaat 292  Q
    ||||| |||| |||||||||| |||||  | |||| ||||||||| || |||| | |||||||||||| ||| ||||| ||||||| ||||| |||||||    
T  40800649 tactctctccatttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatataa-tacaaat 40800551  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcga 326  Q
     ||||| |||||||||||||||||||||||||||    
T  40800550 gttagcatgtaagatgttgtttgatttgtctcga 40800517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 44647976 - 44647843
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||| ||| ||||||||||||  | |||| ||||||| | ||||||| ||||||| |||||  ||| |||||||| ||| |||||||||||||    
T  44647976 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 44647877  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcga 326  Q
     ||||| ||||||||||||||  |||||| ||||    
T  44647876 gttagcatgtaagatgttgttcaatttgtttcga 44647843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 49384678 - 49384810
Alignment:
Q  21 acaaaaaagagaaagtgaatgctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaatt 120  Q
    |||||||||||| |||||||  ||| | ||||||||||||  |||||||||||| | |||||| ||||| |||  ||||||||| |||||| | |||||     
T  49384678 acaaaaaagagatagtgaatattttaattaaatgagtccctccatcattaattactttatacttttttcaaga--ttttgtgtccttatctctttaaatg 49384775  T
Q  121 gcggaaattgagagaattgtaaatggagaggatct 155  Q
    | |||||| ||||||||| ||||| ||||||||||    
T  49384776 gaggaaatggagagaattataaatagagaggatct 49384810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 25171240 - 25171294
Alignment:
Q  280 tataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgtttgatttgtttcgacaaatatt 25171294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 44644618 - 44644513
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||| ||| ||||||||||||  | |||| ||||||| | ||||||| |||||||||||||  ||| |||||||| ||| |||||||||||||    
T  44644618 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaat 44644519  T
Q  293 attagc 298  Q
     |||||    
T  44644518 gttagc 44644513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 334
Target Start/End: Complemental strand, 30385392 - 30385270
Alignment:
Q  209 aaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatg 308  Q
    ||||||||||||  | ||||  |||||||||||||||| |   |||||||||| ||| |||||||||||| ||||||||||||| ||||  |||||||      
T  30385392 aaaatacatgtcgcaattttataatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatgttagtatgtaaga-- 30385295  T
Q  309 ttgtttgatttgtctcgacaaatatt 334  Q
     ||||| |||| ||||||||||||||    
T  30385294 -tgtttaatttctctcgacaaatatt 30385270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 27984555 - 27984671
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| ||||||| ||||||||||||  | |||| |||  |||||||||||| |  ||||||||||| || ||||||||||||| ||  |||||||||    
T  27984555 atactccatccgttttaaaatacatgtcacaattttacaacatgcactattcacattgcttactttgaccat-atttttaactaatatacgaatacaaat 27984653  T
Q  293 attagcgtgtaagatgtt 310  Q
     ||||| |||||||||||    
T  27984654 gttagcttgtaagatgtt 27984671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 334
Target Start/End: Original strand, 16689862 - 16689961
Alignment:
Q  232 atgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaat 331  Q
    ||||||||||||||| | |||||||||||  ||| ||| |||||||| ||||||||||   ||| || ||||| ||||||||||||||||||| || |||    
T  16689862 atgtgcactattcacataacttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgtttgatttgtctcaaccaat 16689958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 22575776 - 22575724
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgattt 319  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  22575776 tttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattt 22575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 7568675 - 7568608
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||| |||||||| |||| |||| ||||||||||||||||||||||| | || |||||||    
T  7568675 tttttaactaatatataaatataaatgttagtgtgtaagatgttgtttgatttgttttgataaatatt 7568608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 9881322 - 9881416
Alignment:
Q  240 tattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| | ||||| ||| || |||||||||||||||| |||| ||| |||| ||| | |||||||||||||| ||||||||| || |||||||    
T  9881322 tattcacataacttattttaaccataatttttaactaatatatacatataaatgttatcatgtaagatgttgttcgatttgtctagataaatatt 9881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 19711951 - 19711814
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    |||||||||| |||||||||||||| ||  | |||||||| |||||||||| || ||||||    | || ||| |||||||||||  ||||||||||| |    
T  19711951 atactccctctgtttcaaaatacatatcgcatttttgcaacgtgcactatttacgtgactt----taactatattttttaactaacatataaatacaagt 19711856  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
      |||| ||||||||| ||||  |||||| |||| |||||||    
T  19711855 gatagcatgtaagatgctgttaaatttgtttcgataaatatt 19711814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 31444986 - 31445053
Alignment:
Q  257 ttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||| ||| |||||||||||| |||||| |||||| || || ||||||||||||||| |||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgtttaatttgtctc 31445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 37336074 - 37335999
Alignment:
Q  63 catcattaattattgtatactatttt-cgagattttttgtgtctttatctttctaaattgcggaaattgagagaat 137  Q
    |||||||||| |||||||||| |||| | ||||||||| ||||||| ||||||||||||| ||||||  |||||||    
T  37336074 catcattaatcattgtatactctttttcaagattttttttgtctttgtctttctaaattgaggaaataaagagaat 37335999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 34634914 - 34635019
Alignment:
Q  201 tccgtttcaaaatacatgtc-caacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcg 299  Q
    |||||||| ||||| ||||| ||||||| |||||||| | | ||||| | ||||| ||||| |||| |||||||||||| ||||||||||||| ||| |     
T  34634914 tccgtttctaaataaatgtcgcaacttt-gcaatgtgaagttttcacataacttattttgataatattttttaactaatatataaatacaaatgttaaca 34635012  T
Q  300 tgtaaga 306  Q
    |||||||    
T  34635013 tgtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 12380960 - 12381061
Alignment:
Q  53 tgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagagga 152  Q
    ||||||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||  ||||| |||| |    |||||||||||||    
T  12380960 tgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagga 12381059  T
Q  153 tc 154  Q
    ||    
T  12381060 tc 12381061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 12385027 - 12385128
Alignment:
Q  53 tgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagagga 152  Q
    ||||||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||  ||||| |||| |    |||||||||||||    
T  12385027 tgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagga 12385126  T
Q  153 tc 154  Q
    ||    
T  12385127 tc 12385128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 44227844 - 44227876
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||||    
T  44227844 ttaatactccctccgtttcaaaatacatgtcca 44227876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 150
Target Start/End: Original strand, 5803769 - 5803907
Alignment:
Q  12 gagatgaacacaaaaaagagaaagtgaatgctttcaat-aaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatc 110  Q
    ||||| || |||||||||||| | | |||| ||||||| ||||| ||| || | |||||||||||| |||| | ||||  |||| |||||||||||||||    
T  5803769 gagataaatacaaaaaagagatactaaatg-tttcaattaaatgggtctcaccttcattaattattttatatttttttaaagatattttgtgtctttatc 5803867  T
Q  111 tttctaaattgcggaaattgagagaattgtaaatggagag 150  Q
    |  |||||| | | |||| ||||||||| ||||| |||||    
T  5803868 tcactaaatagagaaaatggagagaattataaattgagag 5803907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 14777090 - 14777157
Alignment:
Q  252 ttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgattt 319  Q
    |||||||||  ||| |||||||||  | |||||||||||||||||   ||||||||||||||||||||    
T  14777090 ttactttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgtttgattt 14777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 223
Target Start/End: Complemental strand, 36399362 - 36399331
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||||    
T  36399362 aatactccctccgtttcaaaatacatgtccaa 36399331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 222
Target Start/End: Complemental strand, 41959853 - 41959822
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||||    
T  41959853 taatactccctccgtttcaaaatacatgtcca 41959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 5047434 - 5047539
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatct 155  Q
    |||||| |||||||||||||| |||| | ||||| |  ||||||||| |||||||| ||||||| |  ||||| |||| | |  ||||||||||||||||    
T  5047434 gtcccaccatcattaattattttatatt-ttttcaaacttttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatct 5047532  T
Q  156 caactca 162  Q
     ||||||    
T  5047533 taactca 5047539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 7841762 - 7841828
Alignment:
Q  55 agtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    ||||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  7841762 agtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 7841828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 9588668 - 9588698
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||    
T  9588668 aatactccctccgtttcaaaatacatgtcca 9588698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 11641066 - 11641096
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  11641066 atactccctccgtttcaaaatacatgtccaa 11641096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 25170880 - 25170955
Alignment:
Q  195 actccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttta 272  Q
    ||||||| ||||| |||||||||||| || || || |||| ||||||||  |||||||||||||||| ||| ||||||    
T  25170880 actcccttcgttttaaaatacatgtctaatttctgtaatgcgcactatt--cttgacttactttgaccatatttttta 25170955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 36757485 - 36757515
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  36757485 atactccctccgtttcaaaatacatgtccaa 36757515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 40771771 - 40771801
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  40771771 atactccctccgtttcaaaatacatgtccaa 40771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 284328 - 284361
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtcca 222  Q
    |||| |||||||||||||||||||||||||||||    
T  284328 tttattactccctccgtttcaaaatacatgtcca 284361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 323990 - 324055
Alignment:
Q  269 tttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| || ||||||||||||||||||| |||||  ||| ||| ||||||| |||| |||||||    
T  323990 tttaacttatatataaatacaaatattagcatgtaaattgtagttcgatttgtttcgataaatatt 324055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 3943059 - 3943088
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  3943059 atactccctccgtttcaaaatacatgtcca 3943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 3943809 - 3943776
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtcca 222  Q
    |||| |||||||||||||||||||||||||||||    
T  3943809 tttagtactccctccgtttcaaaatacatgtcca 3943776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 12151789 - 12151724
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  12151789 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 12151724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 52024288 - 52024259
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  52024288 tactccctccgtttcaaaatacatgtccaa 52024259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 19895288 - 19895356
Alignment:
Q  266 atttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| |||| |||||| ||||||||||   |||||||||||||| | ||| |||||| |||||||    
T  19895288 atttttaattaatatataaacacaaatattaatatgtaagatgttgttcgttttatctcgataaatatt 19895356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 23045556 - 23045528
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  23045556 tactccctccgtttcaaaatacatgtcca 23045528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 24772182 - 24772154
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  24772182 tactccctccgtttcaaaatacatgtcca 24772154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 41959078 - 41959106
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  41959078 tactccctccgtttcaaaatacatgtcca 41959106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 44452120 - 44452164
Alignment:
Q  280 tataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||||||||||| ||||| ||||| || ||||||||||||||||    
T  44452120 tataaatacaaatgttagcatgtaaaatattgtttgatttgtctc 44452164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 42587512 - 42587370
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  42587512 aatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 42587413  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  42587412 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 42587370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 189 - 334
Target Start/End: Original strand, 623171 - 623316
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatac 288  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||    
T  623171 tttaatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatac 623270  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  623271 aaatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 623316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 190 - 334
Target Start/End: Original strand, 616779 - 616923
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  616779 ttaatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaataca 616878  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  616879 aatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 616923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 192 - 334
Target Start/End: Original strand, 32998448 - 32998590
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  32998448 aatacaccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaa 32998547  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  32998548 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 32998590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 14237280 - 14237420
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  14237280 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 14237379  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  14237380 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 14237420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 18044425 - 18044565
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  18044425 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 18044524  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  18044525 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 18044565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 132017 - 132157
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  132017 tactccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaata 132116  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  132117 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 132157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 40494384 - 40494524
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  40494384 tactctctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 40494483  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  40494484 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 40494524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 41263810 - 41263950
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  41263810 tactctctccatttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 41263909  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  41263910 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 41263950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 334
Target Start/End: Complemental strand, 3100754 - 3100617
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  3100754 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatatta 3100655  T
Q  297 gcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    || |||||||||||| ||||||||||||||||||||||    
T  3100654 gcatgtaagatgttgattgatttgtctcgacaaatatt 3100617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 36642121 - 36641980
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttga-caataatttttaactaatgtataaatacaaat 292  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||    
T  36642121 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaat 36642022  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  36642021 attagcatgtaagatgttgtttgatttgtctcgacaaatatt 36641980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 8394346 - 8394486
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||    
T  8394346 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaata 8394445  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||  | |||||||||||||||||||||||||||||||||    
T  8394446 ttagtatttaagatgttgtttgatttgtctcgacaaatatt 8394486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 190 - 334
Target Start/End: Original strand, 35403512 - 35403656
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  35403512 ttaatacttcatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaataca 35403611  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     |||||| | ||||||||||||||| |||||||||||||||||||    
T  35403612 gatattaacatgtaagatgttgtttaatttgtctcgacaaatatt 35403656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 200 - 334
Target Start/End: Complemental strand, 2766304 - 2766170
Alignment:
Q  200 ctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcg 299  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||     
T  2766304 ctccgtttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagca 2766205  T
Q  300 tgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||| |||||||    
T  2766204 tgtaagatgttgtttgatttgtctcgaaaaatatt 2766170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 13216972 - 13216843
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| || ||    
T  13216972 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgaaa 13216873  T
Q  305 gatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||    
T  13216872 gatgttgtttgatttgtctcgacaaatatt 13216843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 334
Target Start/End: Original strand, 38957177 - 38957310
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||||| ||| ||||||||||| |||||||||||||||||||| |    
T  38957177 tccgtttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcat 38957276  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||||||    
T  38957277 gtaagatgttgtttgatttgtctcgacaaatatt 38957310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 5878317 - 5878456
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtccat-ttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 5878415  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||| | |||||||||||||| |||||||||    
T  5878416 ttagcatgtaagatatcgtttgatttgtctccacaaatatt 5878456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 4270349 - 4270214
Alignment:
Q  199 cctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagc 298  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |    
T  4270349 cctccgttttaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaac 4270250  T
Q  299 gtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     ||||| ||||||| |||||||||||||||||||||    
T  4270249 atgtaatatgttgtgtgatttgtctcgacaaatatt 4270214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 22489539 - 22489395
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||| ||| ||||||| ||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  22489539 taatattccatccgttttaaaatgcatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaa 22489440  T
Q  291 atattag-cgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||   || ||||||||||||||||||||||||||||||||    
T  22489439 atattagtaatgcaagatgttgtttgatttgtctcgacaaatatt 22489395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 204 - 334
Target Start/End: Original strand, 11637792 - 11637922
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    ||||||||||  |||||||| |||| ||||||||||||||||||||||||| ||||||  || |||||||||| ||||||||||||| ||||||| ||||    
T  11637792 gtttcaaaatgtatgtccaatttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgta 11637891  T
Q  304 agatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||| ||||||||||||||    
T  11637892 agatgttgtttgatttatctcgacaaatatt 11637922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 296
Target Start/End: Original strand, 24524100 - 24524202
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  24524100 tactccttccgtttcaaaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaata 24524199  T
Q  294 tta 296  Q
    |||    
T  24524200 tta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 33700338 - 33700205
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtc-caacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||||||||||||||| |||  ||| ||||| ||||||||||| |  ||||||||||| ||| |||||||||||| |||||||||||    
T  33700338 aatactccctccgtttcaaaatacatgtcgcaaaatttacaatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaa 33700239  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctc 324  Q
    || ||||   ||||||||||||||||||||||||    
T  33700238 atgttagtaagtaagatgttgtttgatttgtctc 33700205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 36167075 - 36167180
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||| |||||||||||   | |||||||||||| |||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||    
T  36167075 atactccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaat 36167174  T
Q  293 attagc 298  Q
    ||||||    
T  36167175 attagc 36167180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 331
Target Start/End: Complemental strand, 6414228 - 6414090
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| ||||||| |||||| |||||  | |||||||||||||||||||||| |||||||||||||| ||| ||||||| |||| ||||||| ||||     
T  6414228 atactccatccgttttaaaataaatgtcacatttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaag 6414129  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaat 331  Q
    ||| |  ||||| |||||||| |||||||||||| ||||    
T  6414128 attggtatgtaaaatgttgttcgatttgtctcgataaat 6414090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 38497085 - 38497204
Alignment:
Q  196 ctccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatt 295  Q
    |||||||||||| |||||| |||| ||| |||| |||||||||||||||||||||||||||||           ||||||||||||||||||||||||||    
T  38497085 ctccctccgttttaaaatatatgttcaatttttacaatgtgcactattcacttgacttacttt-----------ttaactaatgtataaatacaaatatt 38497173  T
Q  296 agcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||| || ||||||||||||||||||| ||||    
T  38497174 agcatggaagatgttgtttgatttgtttcga 38497204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 3370487 - 3370378
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||| ||| ||||| |||||||||||||| ||| ||||||| |||| ||||||||||||| |||   |||||||| ||||||||||||| ||    
T  3370487 ttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgtttgatttgtttc 3370388  T
Q  325 gacaaatatt 334  Q
    ||||||||||    
T  3370387 gacaaatatt 3370378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 13217284 - 13217219
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttacttt 258  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  13217284 atactccttccgtttcaaaatacatgtccaatttttgcaatgtacactattcacttgacttacttt 13217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 334
Target Start/End: Original strand, 18090332 - 18090468
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    ||||| ||||| ||| |||||||| || |||| |||||||||||||| |  ||||||| |||||  ||| |||||||||||| |||||||| |||| |||    
T  18090332 tcccttcgttttaaattacatgtcgaattttttcaatgtgcactatttatatgactta-tttgatcatattttttaactaatatataaatataaatgtta 18090430  T
Q  297 gcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    || | |||||||||||| |||||||||||| |||||||    
T  18090431 gcatataagatgttgttcgatttgtctcgataaatatt 18090468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 18035100 - 18035232
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||| ||||| |||||||||| |||||  | |||| |||||| || ||||| |  | | ||| ||||| |||||||||||||||| ||||||| |||||     
T  18035100 tacttcctccttttcaaaatatatgtcgcaattttacaatgtacattattcgcacggcgtacattgaccataatttttaactaatatataaatgcaaatg 18035199  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||||| |||||||||||||||||||||||||||    
T  18035200 ttagcatgtaagatgttgtttgatttgtctcga 18035232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 40716712 - 40716645
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| | |||||||    
T  40716712 tttttaactaatatataaatacaaattttagcatgtaagatgttgtttgatttgtctcaataaatatt 40716645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 333
Target Start/End: Original strand, 5173282 - 5173391
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgtt-gtttgatttgtct 323  Q
    |||||||||||| ||||||||  ||| |||||||||  ||| | |||||||||| ||||||||||||||||| | ||||||||||| |||| |||| |||    
T  5173282 ttttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatgtaagatgttagtttcatttatct 5173381  T
Q  324 cgacaaatat 333  Q
    ||| ||||||    
T  5173382 cgataaatat 5173391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 40204984 - 40204852
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||  |||| |||||||||||  | ||||  |||||||||||||||    |||||||||||  ||| ||||| |||||| |||||||||||||     
T  40204984 tactccctctatttctaaatacatgtcgtaattttaaaatgtgcactattcatccaacttactttgaacatattttttgactaatatataaatacaaatg 40204885  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcga 326  Q
    |||||  ||||| ||||||||||||| ||||||    
T  40204884 ttagcaggtaagttgttgtttgatttatctcga 40204852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 38958942 - 38958883
Alignment:
Q  275 taatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||    
T  38958942 taatgtataaataaaaatattaatatgtaagatgttgtttgatttgtctcgacaaatatt 38958883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 326
Target Start/End: Original strand, 9632153 - 9632287
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||| || ||||||||||||||||||  | |||| ||||||| ||||||||| |   ||| |||    ||| ||||| |||||  ||||||||| ||    
T  9632153 aatactcacttcgtttcaaaatacatgtcgcaattttacaatgtgtactattcacatagtttattttagtcatattttttcactaacatataaatactaa 9632252  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    | ||||| |||||||||||||||||||||||||||    
T  9632253 tgttagcatgtaagatgttgtttgatttgtctcga 9632287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 13586053 - 13585955
Alignment:
Q  37 gaatgctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagaga 135  Q
    ||||||||||||||||| ||| | | |||||||||||||||| |||| ||||| | |||| |||| |||||||||||  |||| | |||||| ||||||    
T  13586053 gaatgctttcaataaataagttctaccatcattaattattgtgtactcttttctaaatttattgtatctttatcttttcaaatggaggaaatggagaga 13585955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 32855638 - 32855584
Alignment:
Q  280 tataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| | |||||||    
T  32855638 tataaatacaaatgttagcatgtaagatgttgtttgatttgtctcaataaatatt 32855584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 617048 - 617016
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  617048 taatactccctccgtttcaaaatacatgtccaa 617016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 623441 - 623409
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  623441 taatactccctccgtttcaaaatacatgtccaa 623409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 44517697 - 44517769
Alignment:
Q  38 aatgctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatc 110  Q
    |||| |||||| ||||| || |||  |||||||||||||||||||  ||||| ||||||||||||||| ||||    
T  44517697 aatgttttcaaaaaatgggttccacaatcattaattattgtatacacttttcaagattttttgtgtctatatc 44517769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 18020928 - 18021001
Alignment:
Q  256 tttgacaataatttttaactaatgtataaatacaaa---tattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    |||||| ||| |||||||||||| || |||||||||   | ||||| |||||||| ||||||||||||||||||    
T  18020928 tttgaccatattttttaactaatatacaaatacaaaatgtgttagcatgtaagatattgtttgatttgtctcga 18021001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 21109857 - 21109818
Alignment:
Q  285 atacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  21109857 atacaaatgttagcatgtaagatgttgtttgatttgtctc 21109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 2766043 - 2766077
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||| |||||||||||||||||||||||||    
T  2766043 tttaatacttcctccgtttcaaaatacatgtccaa 2766077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 40058582 - 40058552
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||    
T  40058582 aatactccctccgtttcaaaatacatgtcca 40058552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Complemental strand, 40494647 - 40494617
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  40494647 atactccctccgtttcaaaatacatgtccaa 40494617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 5878582 - 5878549
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||| |||||||||    
T  5878582 ttaatactccctccgtttcaaaatgcatgtccaa 5878549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 8697952 - 8697923
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  8697952 atactccctccgtttcaaaatacatgtcca 8697923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 14237542 - 14237513
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  14237542 tactccctccgtttcaaaatacatgtccaa 14237513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 30426722 - 30426787
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  30426722 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 30426787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 334
Target Start/End: Original strand, 36167819 - 36167848
Alignment:
Q  305 gatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||||||||    
T  36167819 gatgttgtttgatttgtctcgacaaatatt 36167848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 40919007 - 40918978
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  40919007 atactccctccgtttcaaaatacatgtcca 40918978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 41308015 - 41307986
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  41308015 atactccctccgtttcaaaatacatgtcca 41307986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 2540212 - 2540180
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||| ||||||||||||||||||||||||    
T  2540212 ttaatacttcctccgtttcaaaatacatgtcca 2540180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 223
Target Start/End: Original strand, 3100492 - 3100520
Alignment:
Q  195 actccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||    
T  3100492 actccctccgtttcaaaatacatgtccaa 3100520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 3585451 - 3585479
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  3585451 tactccctccgtttcaaaatacatgtcca 3585479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 27034997 - 27035025
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  27034997 tactccctccgtttcaaaatacatgtcca 27035025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 36068080 - 36068108
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  36068080 tactccctccgtttcaaaatacatgtcca 36068108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 37345571 - 37345599
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  37345571 tactccctccgtttcaaaatacatgtcca 37345599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 40486506 - 40486478
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  40486506 tactccctccgtttcaaaatacatgtcca 40486478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 43275674 - 43275646
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  43275674 tactccctccgtttcaaaatacatgtcca 43275646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 45278754 - 45278726
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  45278754 tactccctccgtttcaaaatacatgtcca 45278726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 4e-63; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 19141330 - 19141188
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  19141330 aatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaa 19141231  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  19141230 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 19141188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 39358145 - 39358286
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  39358145 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 39358244  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  39358245 attagcatgtaagatgttctttgatttgtctcgacaaatatt 39358286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 8042284 - 8042144
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 8042185  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  8042184 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 8042144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 196 - 334
Target Start/End: Original strand, 5404998 - 5405136
Alignment:
Q  196 ctccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatt 295  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  5404998 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 5405097  T
Q  296 agcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  5405098 agcatgtaagatgttgtttgatttgtctcgacaaatatt 5405136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 7608049 - 7608189
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  7608049 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 7608148  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  7608149 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 7608189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 44365157 - 44365297
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  44365157 tactctctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 44365256  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  44365257 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 44365297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 2183222 - 2183082
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||    
T  2183222 taatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaa 2183123  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| |||||||   |||||||||||||||||||||||||    
T  2183122 atattagcatgtaaga---tgtttgatttgtctcgacaaatatt 2183082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 201 - 334
Target Start/End: Original strand, 6223073 - 6223206
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| |    
T  6223073 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcat 6223172  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| |||||||||||||||||||||||||    
T  6223173 gtaagatgatgtttgatttgtctcgacaaatatt 6223206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 208 - 332
Target Start/End: Complemental strand, 11841841 - 11841717
Alignment:
Q  208 caaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagat 307  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 11841742  T
Q  308 gttgtttgatttgtctcgacaaata 332  Q
    |||||||||||||||||||||||||    
T  11841741 gttgtttgatttgtctcgacaaata 11841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 7799847 - 7799987
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||| ||||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||  || |||||||||||| |||||||||||||     
T  7799847 tactccctacgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatg 7799946  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  7799947 ttagcatgtaagatgttgtttgatttgtctcggcaaatatt 7799987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 33607377 - 33607512
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||||    
T  33607377 tactccctcc-tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaata 33607475  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |     ||||||||||||||| |||||||||||||||||||    
T  33607476 t----atgtaagatgttgttttatttgtctcgacaaatatt 33607512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 36072185 - 36072314
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||  ||| ||||||||||||||||||||| |||||||||| |||||    
T  36072185 tttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagcatgtaa 36072284  T
Q  305 gatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||  ||||||||    
T  36072285 gatgttatttgatttgtctcaccaaatatt 36072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 200 - 334
Target Start/End: Original strand, 32774597 - 32774731
Alignment:
Q  200 ctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcg 299  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||| ||||||||||||||||| ||| |||||||||||| |||| ||| ||||||||       
T  32774597 ctccgtttcaaaatacatgttcaagttttataatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaatattaata 32774696  T
Q  300 tgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||||||| ||||||||||    
T  32774697 tgtaagatgttgtttgatttgtcttgacaaatatt 32774731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 36719581 - 36719446
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| ||||||||||| ||||||||||| ||||||||   |||||||||||||||||||||||||| ||| |||||||     ||||||||||||||    
T  36719581 atactccttccgtttcaaa-tacatgtccaatttttgcaacaagcactattcacttgacttactttgaccatactttttaa-----gtataaatacaaat 36719488  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  36719487 attagcatttaagatgttgtttgatttgtctcgacaaatatt 36719446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 19262680 - 19262793
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||||||| | || |||||||||||| ||| |||||||||||| ||||||||||||||    
T  19262680 tacttcctccgtttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaata 19262779  T
Q  294 ttagcgtgtaagat 307  Q
    ||||| ||||||||    
T  19262780 ttagcatgtaagat 19262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 13125362 - 13125267
Alignment:
Q  239 ctattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||||    
T  13125362 ctattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgtttgatttgtctcgataaatatt 13125267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 229 - 334
Target Start/End: Original strand, 44644905 - 44645010
Alignment:
Q  229 gcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgaca 328  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||||||||||| |||||||| |||||||| | | ||||||||||||| |||||||| ||||    
T  44644905 gcaatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgtttaatttgtcttgaca 44645004  T
Q  329 aatatt 334  Q
    ||||||    
T  44645005 aatatt 44645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 334
Target Start/End: Complemental strand, 9172358 - 9172268
Alignment:
Q  244 cacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||| |||||||    
T  9172358 cacttcacttactttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgtttgatttgcctcgataaatatt 9172268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 11931701 - 11931818
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    |||||||||||||||||  | |||| |||| |||| ||||||  | |||||||||||| ||| |||||||||||| ||||||||||||| ||||| | ||    
T  11931701 gtttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcattta 11931800  T
Q  304 agatgttgtttgatttgt 321  Q
    ||||||||||||||||||    
T  11931801 agatgttgtttgatttgt 11931818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 22839157 - 22839057
Alignment:
Q  226 tttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcg 325  Q
    ||||||||||||||||||||| | |||||||||||| ||| |||||||||| | |||||||  |||| ||||| | ||||||||||||||||||||||||    
T  22839157 tttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgtttgatttgtctcg 22839058  T
Q  326 a 326  Q
    |    
T  22839057 a 22839057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 24251956 - 24252089
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    |||||||| | ||||||||||||||||| ||  | |||| |||| || | ||||||| | ||||| |||||| ||| |||||||||||| ||||||||||    
T  24251956 ttaatacttcatccgtttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaataca 24252055  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||| ||||| ||||| |||||||||||||||||||    
T  24252056 aatgttagcatgtaa-atgttgtttgatttgtctc 24252089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 6591101 - 6591217
Alignment:
Q  42 ctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgta 141  Q
    ||||||||||||| | |||| ||||||||| ||||||||| | ||||| ||||||||||||||||||| |||  |||| | ||||||  ||| |||| ||    
T  6591101 ctttcaataaatgggacccaccatcattaactattgtatattcttttcaagattttttgtgtctttatattttcaaatggaggaaatgaagataattata 6591200  T
Q  142 aatggagaggatctcaa 158  Q
    |||||||||||||||||    
T  6591201 aatggagaggatctcaa 6591217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 9007049 - 9006942
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||| ||| ||||||||||||||||  | |||| ||||||||| ||||||  |  ||||||||||| ||| |||||||||||| |||||||||||    
T  9007049 taatactccatccatttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaa 9006950  T
Q  291 atattagc 298  Q
    || |||||    
T  9006949 atgttagc 9006942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 38292008 - 38292082
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||| ||| |||||||||| | ||||||||||||| ||| | |||||||||||||||||||||||||    
T  38292008 acttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 38292082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 43444791 - 43444689
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    ||||||||||||||||  | |||| ||||||||| ||||||| | | || ||||||| ||| |||||||||||| ||||||||||||| ||||| |||||    
T  43444791 tttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 43444692  T
Q  305 gat 307  Q
    |||    
T  43444691 gat 43444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 42133749 - 42133889
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||| | ||||||||||||||||  | ||||  |||||||||||||||  |   |||||||||  ||| |||||||||||| |||||||||||    
T  42133749 taatactcccttcatttcaaaatacatgtcgtaattttaaaatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaa 42133848  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    || ||||| || ||||   |||||||||| |||||| |||||||    
T  42133849 atgttagcatgaaaga---tgtttgatttatctcgataaatatt 42133889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 16865069 - 16865180
Alignment:
Q  209 aaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatg 308  Q
    ||||||||||||  | |||| |||| | || ||||||  |||||||||||||| ||| |||||||||||  ||||||||||||| ||||| |||||| ||    
T  16865069 aaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaagttg 16865168  T
Q  309 ttgtttgatttg 320  Q
    ||||| ||||||    
T  16865169 ttgttcgatttg 16865180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 324
Target Start/End: Complemental strand, 31610876 - 31610785
Alignment:
Q  233 tgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||||| | ||||| ||| || ||  |||||||||||| ||||||||||||| ||||  ||||||| |||||||||||||||||    
T  31610876 tgtgcactattcacataacttatttttaccattttttttaactaatatataaatacaaatgttagaatgtaagacgttgtttgatttgtctc 31610785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 13117530 - 13117457
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtct 323  Q
    |||||||||||| ||| ||||||||| || |||||||| |||||||||  | |||||||||||| |||||||||    
T  13117530 acttactttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgttcgatttgtct 13117457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 19166013 - 19165905
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||||| ||||||| ||||||  |||||  ||  ||||||| |||| ||||||||||| | ||| | ||||||||||||||| |||||| ||    
T  19166013 ttttgcaatgtgca-tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgttatcatgtaagatgttgtttaatttgtttc 19165915  T
Q  325 gacaaatatt 334  Q
    || |||||||    
T  19165914 gataaatatt 19165905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 38839136 - 38839205
Alignment:
Q  257 ttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| ||||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtatgatttctctcga 38839205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 9553926 - 9553843
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||   | |||||||||||| ||||||| ||||||||| | ||||| |||||||| |||||||||||| |||||||    
T  9553926 acttactttgaccgcattttttaactaatatataaat-caaatattaacatgtaaaatgttgttcgatttgtctcgataaatatt 9553843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 36758722 - 36758815
Alignment:
Q  12 gagatgaacacaaaaaagagaaagtgaatgctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatc 110  Q
    |||||||||| ||||||   ||| ||||||||| |||||||||  || || ||||||||||| |||||||| |||||| | |||| |||||||||||||    
T  36758722 gagatgaacaaaaaaaa---aaaatgaatgcttccaataaatg--tctcaccatcattaattgttgtatacaattttcaaaatttgttgtgtctttatc 36758815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 5405261 - 5405229
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  5405261 taatactccctccgtttcaaaatacatgtccaa 5405229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 7608314 - 7608282
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  7608314 taatactccctccgtttcaaaatacatgtccaa 7608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 13598440 - 13598523
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaacta 276  Q
    |||||| ||||||||| |||||| ||||   | |||| ||||||||||||||||  |||||||||||||| ||| ||||||||||    
T  13598440 aatacttcctccgttttaaaatatatgttgcattttt-caatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 19141063 - 19141095
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaa 223  Q
    |||||||||||||||||||||||||||||||||    
T  19141063 taatactccctccgtttcaaaatacatgtccaa 19141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 321
Target Start/End: Complemental strand, 24093802 - 24093671
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaactttt-gcaatgtgcactattcacttgacttactttgacaataattttt-aactaatgtataaatac 288  Q
    ||||||| | ||| ||||||||||||||||  | |||| || |||||| ||||||   ||| |||||||||| ||| ||||| ||||||  ||||| |||    
T  24093802 taatacttcatccatttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatataa-tac 24093704  T
Q  289 aaatattagcgtgtaagatgttgtttgatttgt 321  Q
    |||| ||||| |||||||||||||| |||||||    
T  24093703 aaatgttagcatgtaagatgttgttcgatttgt 24093671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 13238703 - 13238604
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatct 155  Q
    |||||| |||||||||||||  | || | ||||| ||||||| ||||||||||||| || ||||||  |||||||||| |    ||||||||||||||||    
T  13238703 gtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaattgaagaaattgagaaacgcataaatggagaggatct 13238604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 24259532 - 24259493
Alignment:
Q  285 atacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  24259532 atacaaatgttagcatgtaagatgttgtttgatttgtctc 24259493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 3518906 - 3518936
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||||    
T  3518906 aatactccctccgtttcaaaatacatgtcca 3518936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 35316847 - 35316749
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| | ||||||||||| || ||||||  ||||| |||| |   ||||||||||||||||    
T  35316847 gtcccaccatcattaattatattttacttttttcaagattttatatgtctttatctctccaaattgaagaaatggagaaacacgtaaatggagaggatc 35316749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 36177809 - 36177723
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataattttt-aactaatgtataaatacaaatattagcgtgtaagatgtt 310  Q
    |||||||||| ||| ||||||| ||| ||| |||||| ||| ||||| ||||||| |||||||| |||||||| | | |||||||||    
T  36177809 ttttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 11841593 - 11841622
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  11841593 tactccctccgtttcaaaatacatgtccaa 11841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 12970017 - 12969988
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  12970017 atactccctccgtttcaaaatacatgtcca 12969988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 334
Target Start/End: Complemental strand, 33228617 - 33228564
Alignment:
Q  281 ataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| ||||||||   |||||||||||||| |||||||||||| |||||||    
T  33228617 ataaatataaatattaatatgtaagatgttgttcgatttgtctcgataaatatt 33228564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 44365419 - 44365390
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  44365419 tactccctccgtttcaaaatacatgtccaa 44365390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 214
Target Start/End: Complemental strand, 441439 - 441411
Alignment:
Q  186 tattttaatactccctccgtttcaaaata 214  Q
    |||||||||||||||||||||||||||||    
T  441439 tattttaatactccctccgtttcaaaata 441411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 1102503 - 1102531
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  1102503 tactccctccgtttcaaaatacatgtcca 1102531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 24607841 - 24607894
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||| |||||||| |||| ||||    |||||||||||||||||||||||    
T  24607841 tttttaactaatatataaatataaatgttag----taagatgttgtttgatttgtctc 24607894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 31904099 - 31904027
Alignment:
Q  237 cactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgt 309  Q
    |||||||||| |  |||||| |||| ||| |||||||||||| |||||||| |||||||| |  |||||||||    
T  31904099 cactattcacatagcttactctgaccatattttttaactaatatataaatataaatattatcacgtaagatgt 31904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 34224431 - 34224403
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  34224431 tactccctccgtttcaaaatacatgtcca 34224403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 6e-62; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 978077 - 978217
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 978176  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  978177 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 978217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 40156198 - 40156338
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  40156198 tactccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaata 40156297  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  40156298 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 40156338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 8086295 - 8086152
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  8086295 taatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaa 8086196  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  8086195 atattaacatgtaagatgttgtttgatttgtctcgacaaatatt 8086152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 191 - 334
Target Start/End: Original strand, 33387217 - 33387360
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  33387217 taatactccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaa 33387316  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  33387317 atattagcatgtaagatgttgtttgatttgtctcgacaaatatt 33387360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 14634414 - 14634279
Alignment:
Q  199 cctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagc 298  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  14634414 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagc 14634315  T
Q  299 gtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     |||||||||||||||||||||||||||||||||||    
T  14634314 atgtaagatgttgtttgatttgtctcgacaaatatt 14634279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 9502889 - 9502749
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||| |||||||||||  || ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  9502889 tactccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 9502790  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  9502789 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 9502749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 203 - 334
Target Start/End: Complemental strand, 3472530 - 3472399
Alignment:
Q  203 cgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgt 302  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||    
T  3472530 cgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgt 3472431  T
Q  303 aagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||| |||||||||||    
T  3472430 aagatgttgtttgatttgtcgcgacaaatatt 3472399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 33587734 - 33587591
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| |||||||||||    
T  33587734 taatactccatctgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaa 33587635  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| | ||||||||||||||||||||||||| |||||||||    
T  33587634 atattaacatgtaagatgttgtttgatttgtctcaacaaatatt 33587591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 18094344 - 18094203
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||||| |  ||| ||||||||||||||||||||||||||    
T  18094344 atactccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaaat 18094245  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  18094244 attagcatgtaagatgttgtttggtttgtctcgacaagtatt 18094203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 30355137 - 30354996
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| || |||  ||||||||||| ||||||||||||    
T  30355137 aatactccctc-gtttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaa 30355039  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  30355038 tattagcatgtaagatgttgtttaatttgtctcgacaaatatt 30354996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 206 - 334
Target Start/End: Original strand, 11251126 - 11251254
Alignment:
Q  206 ttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaag 305  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| |||| |    
T  11251126 ttcaaaatatatgtctaacttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacg 11251225  T
Q  306 atgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||| ||||||||||||||    
T  11251226 atgttatttgatttatctcgacaaatatt 11251254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 324
Target Start/End: Complemental strand, 24992400 - 24992270
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||  | |||| ||||||||||||||||| |  ||||||||||| ||| |||||||||||| ||||||||||||||    
T  24992400 tactccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaata 24992301  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||| | |||||||||||||||||||||||    
T  24992300 ttagcatataagatgttgtttgatttgtctc 24992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 34111961 - 34112097
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    |||||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||    
T  34111961 atactctctccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaaat 34112060  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||| | |||||||     |||||||||||||||||||||||    
T  34112061 attatcatgtaaga-----tttgatttgtctcgacaaatatt 34112097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 7224165 - 7224305
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||  |||| ||||||||||| ||  |||||||||||| |||||| | ||||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  7224165 tactccctatgttttaaaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaata 7224264  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  7224265 ttagcatgtaaaatgttgtttgatttgtctcgacaaatatt 7224305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 9050827 - 9050698
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||           ||||||||||||||||||||||||    
T  9050827 tactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttaacttacttt-----------ttaactaatgtataaatacaaata 9050739  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  9050738 ttagcatgtaagatgttgtttgatttgtctcgaaaaatatt 9050698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 11785991 - 11785850
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatac-a 289  Q
    |||||||| || | |||||||||||||||  || |||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||| |    
T  11785991 taatactctcttcatttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaa 11785892  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcgacaaat 331  Q
    ||||||| | |||||||||||||||| ||||||||| |||||    
T  11785891 aatattaccatgtaagatgttgtttggtttgtctcggcaaat 11785850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 38916513 - 38916372
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||  | ||||||| | |||||||||||| |||||| ||||||| ||| |||||||||||  |||||||||||||    
T  38916513 atactccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaat 38916414  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     ||||| ||| ||||||| || ||||||| |||| |||||||    
T  38916413 gttagcatgtgagatgttattcgatttgtttcgataaatatt 38916372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 194 - 324
Target Start/End: Complemental strand, 24916510 - 24916378
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttt--aactaatgtataaatacaaa 291  Q
    |||||| ||||||||||||||||||||  | |||| ||||||| ||||||||| |  ||||||||||| ||| |||||  ||||||| ||||||||||||    
T  24916510 tactccatccgtttcaaaatacatgtcacaattttacaatgtgtactattcacatagcttactttgaccatattttttttaactaatttataaatacaaa 24916411  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||||| | |||||||||||||||||||||||    
T  24916410 tattagcatataagatgttgtttgatttgtctc 24916378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 12007894 - 12007754
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||  | ||||  | ||||||||||| || ||||||| ||||||  || ||||||| |||| |||||||||||||     
T  12007894 tactccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatg 12007795  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     |||| ||||| |||||||||||||||| ||||||||||||    
T  12007794 ctagcatgtaaaatgttgtttgatttgtttcgacaaatatt 12007754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 27109735 - 27109828
Alignment:
Q  240 tattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||| | || ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27109735 tattcatttgacttactttgata-tactttttaattaatgtaaaaatacaaatattagcatgtaagatgttgtttgatttgtctcgacaaatatt 27109828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 12447626 - 12447547
Alignment:
Q  246 cttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgac 327  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||  ||||||| ||||||||||||||||||||||||||||    
T  12447626 cttgacttactttgaccatactttttaactaatgtttaaataca--tattagcatgtaagatgttgtttgatttgtctcgac 12447547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 11761125 - 11761196
Alignment:
Q  253 tactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  11761125 tactttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgtctc 11761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 27579681 - 27579552
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    |||||||||||||||||  | |||||  ||||| | |||||| | |||||||||| || ||| |||||||||||| ||||||||||||| ||||| ||||    
T  27579681 gtttcaaaatacatgtcacatttttgtgatgtgtattattcaat-gacttactttaactatattttttaactaatatataaatacaaatgttagcatgta 27579583  T
Q  304 agatgttgtttgatttgtctcgacaaatatt 334  Q
    |||| |  ||||||||||||| |||||||||    
T  27579582 agatataatttgatttgtctcaacaaatatt 27579552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 39776629 - 39776746
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||  ||||||||||||| ||  | ||||||||||| |||||||||| | ||||| ||||||  || |||||||||||  |||||||||||||    
T  39776629 atactccctcgatttcaaaatacatttcgtatttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaat 39776728  T
Q  293 attagcgtgtaagatgtt 310  Q
    |||||| ||||| |||||    
T  39776729 attagcatgtaaaatgtt 39776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 32400400 - 32400467
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| | |||||||    
T  32400400 tttttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgtctcaataaatatt 32400467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 237 - 334
Target Start/End: Complemental strand, 3422432 - 3422332
Alignment:
Q  237 cactattcacttgacttactttgacaataattttt---aactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatat 333  Q
    |||||||||| | |||||||||||| ||| |||||   ||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| || ||||||    
T  3422432 cactattcacataacttactttgactatatttttttttaactaatatataaatacaaatgttagcatgtaagatgttgattgatttgtcttgataaatat 3422333  T
Q  334 t 334  Q
    |    
T  3422332 t 3422332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 12456871 - 12456773
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtct 323  Q
    |||| |||||||||||||| || | ||||||||| |  ||| |||||||||||| || |||||||||| ||||  ||||||||||||||||||||||||    
T  12456871 ttttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgtttgatttgtct 12456773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 311
Target Start/End: Original strand, 32017217 - 32017330
Alignment:
Q  198 ccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattag 297  Q
    |||||||||| |||||||||| |  | ||||   ||||||| ||||||| | |||||||||||  ||| |||||||||||| ||||||||||||| ||||    
T  32017217 ccctccgttttaaaatacatgacgcaattttatgatgtgcaatattcacataacttactttgatcatattttttaactaatatataaatacaaatgttag 32017316  T
Q  298 cgtgtaagatgttg 311  Q
    | ||||||||||||    
T  32017317 catgtaagatgttg 32017330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 326
Target Start/End: Original strand, 18998745 - 18998819
Alignment:
Q  252 ttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||||||| || ||| |||||||||||| ||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  18998745 ttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtttcga 18998819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 6996012 - 6996112
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||| |||||||||||||||| | ||||| ||| || ||| |||||||||||| |||||||| |||| ||| | ||||| || ||||||||||||||||    
T  6996012 ttttgtaatgtgcactattcacataactta-tttaactatattttttaactaatatataaatataaatgttaccatgtaaaatattgtttgatttgtctc 6996110  T
Q  325 ga 326  Q
    ||    
T  6996111 ga 6996112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 3057441 - 3057333
Alignment:
Q  53 tgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagagga 152  Q
    ||||| |||||||||||||||||| |||||| ||||| |  |||||||||||||||||| || |||| |  |||| ||||||||   |||||||||| ||    
T  3057441 tgagttccatcatcattaattattttatacttttttcaaacttttttgtgtctttatctctcaaaatggaagaaagtgagagaaacataaatggagatga 3057342  T
Q  153 tctcaactc 161  Q
    ||| |||||    
T  3057341 tcttaactc 3057333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 12360010 - 12359951
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    |||||||||||| ||||||||||||| ||||| || ||||| ||||||||||||||||||    
T  12360010 tttttaactaatatataaatacaaatgttagcatgaaagatattgtttgatttgtctcga 12359951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 20692653 - 20692541
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||| ||| |||| |||||||| |||  | |||||||||||||| ||| |||||||| || |||||| ||| |||||||| ||  ||||||||||||    
T  20692653 aatactctctctgttttaaaatacacgtcacatttttgcaatgtgcattatccacttgacgtattttgaccatactttttaaccaa--tataaatacaaa 20692556  T
Q  292 tattagcgtgtaaga 306  Q
    ||||| | |||||||    
T  20692555 tattaacatgtaaga 20692541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 12448333 - 12448275
Alignment:
Q  195 actccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgactt 253  Q
    |||||||||||||||||||||||||| || ||||| |||  ||||||||||||||||||    
T  12448333 actccctccgtttcaaaatacatgtctaatttttgtaatacgcactattcacttgactt 12448275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 128201 - 128140
Alignment:
Q  94 ttttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatct 155  Q
    |||||||||| ||||||| ||||||| | |||||| |||| |||||||||||||||||||||    
T  128201 ttttttgtgtttttatctctctaaatggaggaaatggagacaattgtaaatggagaggatct 128140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 31197911 - 31197854
Alignment:
Q  235 tgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||| || | ||||||||||||||||||||||||||||  |||||||||||||    
T  31197911 tgcactattgacctaacttactttgacaataatttttaactaaaatataaatacaaat 31197854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 10696790 - 10696856
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttga 260  Q
    |||||| |||||||||||||||| |||    |||||||||||||||||||||  |||||||||||||    
T  10696790 tactccatccgtttcaaaatacacgtcgctattttgcaatgtgcactattcatatgacttactttga 10696856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 9502623 - 9502656
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||||||    
T  9502623 ttaatactccctccgtttcaaaatacatgtccaa 9502656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 18598543 - 18598620
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttt 270  Q
    ||||||| || |||||||||||||||||  | |||||||||||||| |||| || ||| |||||||||| ||| ||||    
T  18598543 atactccatctgtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 318
Target Start/End: Complemental strand, 26387097 - 26387017
Alignment:
Q  238 actattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatt 318  Q
    |||||| ||||  ||||||||||  ||| |||||||||||  |||||||| |||| ||||| | |||||||||||||||||    
T  26387097 actatttacttagcttactttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgtttgatt 26387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 32129670 - 32129768
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    |||||| |||||||||||||  | |||| ||||| | ||||| ||||||||||||| || ||||||  ||||| |||| |  | |||||||||||||||    
T  32129670 gtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatc 32129768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 978339 - 978310
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  978339 tactccctccgtttcaaaatacatgtccaa 978310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 14634157 - 14634186
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  14634157 tactccctccgtttcaaaatacatgtccaa 14634186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 30720774 - 30720741
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtcca 222  Q
    |||| |||||||||||||||||||||||||||||    
T  30720774 tttattactccctccgtttcaaaatacatgtcca 30720741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 33387481 - 33387452
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  33387481 tactccctccgtttcaaaatacatgtccaa 33387452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 35660662 - 35660727
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  35660662 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 35660727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 37495667 - 37495712
Alignment:
Q  251 cttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    ||||||||||  ||| |||||||||||| |||||||||||||||||    
T  37495667 cttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 5947767 - 5947715
Alignment:
Q  240 tattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| | |||||||||||||||| |||||| ||||  |||||||||||||    
T  5947767 tattcacataacttactttgacaatattttttagctaacatataaatacaaat 5947715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 12807130 - 12807102
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  12807130 tactccctccgtttcaaaatacatgtcca 12807102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 15305265 - 15305237
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  15305265 tactccctccgtttcaaaatacatgtcca 15305237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 25773649 - 25773677
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  25773649 tactccctccgtttcaaaatacatgtcca 25773677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 27762836 - 27762927
Alignment:
Q  63 catcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatct 155  Q
    |||||||||||||| |||| | ||| | ||||||||||| | ||||||| || |||| | |||||| || | |||| ||||||||||||||||    
T  27762836 catcattaattattatatatt-tttccaagattttttgtatttttatctctcaaaatggtggaaatggaaacaattataaatggagaggatct 27762927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 6e-62; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 26169986 - 26170126
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 26170085  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  26170086 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 26170126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 192 - 334
Target Start/End: Complemental strand, 38416914 - 38416772
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  38416914 aatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaa 38416815  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  38416814 tattagcatgtaagatgttgtttgatttgtgtcgacaaatatt 38416772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 47386549 - 47386408
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  47386549 atactccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaat 47386450  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  47386449 attagcatgtaagatgttgtttgatttgtctcgacatatatt 47386408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 25296842 - 25296702
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||| |||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25296842 tactctctccgtttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 25296743  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  25296742 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 25296702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 29830343 - 29830483
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 29830442  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  29830443 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 29830483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 44232339 - 44232199
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  44232339 tactccatccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 44232240  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  44232239 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 44232199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 55209836 - 55209696
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||    
T  55209836 tactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaata 55209737  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  55209736 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 55209696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 192 - 334
Target Start/End: Original strand, 43967721 - 43967863
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  43967721 aatactccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaa 43967820  T
Q  292 tattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  43967821 tattagcatgtaagatgttgtttgatttgtctcgacaaatatt 43967863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 17610280 - 17610420
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  17610280 tactccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaata 17610379  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  17610380 ttagcatgtaagatgttgtttaatttgtctcgacaaatatt 17610420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 54330952 - 54330812
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  54330952 tactccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaata 54330853  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  54330852 ttagcatgtaagatgttgtttgatttatctcgacaaatatt 54330812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 12240430 - 12240300
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 12240331  T
Q  304 agatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||||||||||||||    
T  12240330 agatgttgtttgatttgtctcgacaaatatt 12240300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 35381157 - 35381016
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||    
T  35381157 atactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaat 35381058  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||||||||||||| ||| ||||||||||||    
T  35381057 attagcatgtaagatgttgtttgatctgtttcgacaaatatt 35381016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 2760989 - 2760852
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  2760989 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaata 2760890  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||   |||||||||||||||||||||||||    
T  2760889 ttagcatgtaaga---tgtttgatttgtctcgacaaatatt 2760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 31010214 - 31010354
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||| |||||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  31010214 tactccctcggtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaata 31010313  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  31010314 ttagcatgtaagatattgtttgatttgtctcgacaaatatt 31010354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 38716886 - 38717029
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  38716886 atactccctctgtttcaaaatacatgtccaatttttgcaatgtgcactattaa-ttgacttactttgaccatactttttaactaatgtataaatacaaat 38716984  T
Q  293 attagcgtgtaaga---tgttgtttgatttgtctcgacaaatatt 334  Q
    |||||| |||||||   ||||||||||||||||||||||||||||    
T  38716985 attagcatgtaagatgttgttgtttgatttgtctcgacaaatatt 38717029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 26125708 - 26125848
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||||||||||||||| |  | ||| |||| |||| |||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  26125708 tactccctccgtttcaaaatataaattcaatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 26125807  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  26125808 ttagcatgtaagatgttgtttgatttgtctcgacaaatatt 26125848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 203 - 334
Target Start/End: Original strand, 12625260 - 12625391
Alignment:
Q  203 cgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgt 302  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||  |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||    
T  12625260 cgtttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 12625359  T
Q  303 aagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||||||||||||||||| |||||||    
T  12625360 aagatgttgtttgatttgtctcgaaaaatatt 12625391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 197 - 334
Target Start/End: Original strand, 55191827 - 55191964
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||| |||||||||||||||    
T  55191827 tccctccgtttcaaaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatatta 55191926  T
Q  297 gcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    || || || |||||||||||||||||||||||||||||    
T  55191927 gcatgcaaaatgttgtttgatttgtctcgacaaatatt 55191964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 333
Target Start/End: Original strand, 25918210 - 25918342
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||  || |||||||| |||||||||||| |||||||||| |    
T  25918210 tccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcat 25918309  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatat 333  Q
    |||||||||||||||||||||||||||||||||    
T  25918310 gtaagatgttgtttgatttgtctcgacaaatat 25918342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 35686373 - 35686493
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  35686373 tactccctcagtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaata 35686472  T
Q  294 ttagcgtgtaagatgttgttt 314  Q
    ||| | |||||||||||||||    
T  35686473 ttatcatgtaagatgttgttt 35686493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 197 - 334
Target Start/End: Complemental strand, 17446892 - 17446755
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    ||||||| ||| |||||| |||||||| |||| |||||||||||||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||    
T  17446892 tccctccattttaaaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatatta 17446793  T
Q  297 gcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     | |||||||||||||||||||||||||||||||||||    
T  17446792 acatgtaagatgttgtttgatttgtctcgacaaatatt 17446755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 50205742 - 50205883
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| | |||||||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||    
T  50205742 atactccattcgtttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaat 50205841  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||  ||||||||||||||||||| ||||||||||||||    
T  50205842 attagctcgtaagatgttgtttgatttatctcgacaaatatt 50205883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 19433624 - 19433488
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataa----tttttaactaatgtataaataca 289  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||     |||||||||| ||||||||||||    
T  19433624 tactccctctgtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaataca 19433525  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19433524 aatattagcatgtaagatgttgtttgatttgtctcga 19433488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 45291863 - 45291972
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||| |||||||||||||||||||||||||||||||  ||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  45291863 ttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 45291962  T
Q  325 gacaaatatt 334  Q
    ||||||||||    
T  45291963 gacaaatatt 45291972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 33841835 - 33841963
Alignment:
Q  34 agtgaatgctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgaga 133  Q
    |||||||| |||| ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| | |||||| ||||    
T  33841835 agtgaatggtttcgataaatgggtcccaccatcattaattattgtatactcttttcaagattttttgtgtctttatctttccaaatggaggaaatggaga 33841934  T
Q  134 gaattgtaaatggagaggatctcaactca 162  Q
    |||||||||||| ||||||||||||||||    
T  33841935 gaattgtaaatgaagaggatctcaactca 33841963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 9029714 - 9029571
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaact---tttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    |||||| ||||||| ||||||||||||||| |   |||||||| || |||||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  9029714 tactccatccgttttaaaatacatgtccaattaattttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaa 9029615  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||    
T  9029614 atattagcacgtaagatattgtttgatttgtctcgacaaatatt 9029571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 201 - 334
Target Start/End: Complemental strand, 50620937 - 50620804
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgt 300  Q
    ||||||| |||||| |||||||| ||| ||||| |||||||||||||| |||||||||||| |||  ||||||||||||||||||||| ||||||||| |    
T  50620937 tccgttttaaaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcat 50620838  T
Q  301 gtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||| |||||||||||||| ||||||||    
T  50620837 gtaagatgttttttgatttgtctcggcaaatatt 50620804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 231 - 334
Target Start/End: Complemental strand, 4467744 - 4467641
Alignment:
Q  231 aatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaa 330  Q
    |||||||| |||| ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4467744 aatgtgcattatttacttgacttgctttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcgacaaa 4467645  T
Q  331 tatt 334  Q
    ||||    
T  4467644 tatt 4467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 55800837 - 55800938
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    |||||||||||||| |||||| | ||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  55800837 tccctccgtttcaatatacatcttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 55800936  T
Q  297 gc 298  Q
    ||    
T  55800937 gc 55800938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 332
Target Start/End: Complemental strand, 27407881 - 27407741
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||| |||||||||||||| |  | ||||||| |||| ||||||||| | ||||||||||||  || |||||||||||| ||||||||||||||    
T  27407881 tactccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaata 27407782  T
Q  294 ttagc--gtgtaagatgttgtttgatttgtctcgacaaata 332  Q
    |||||  |||||||||||||||||| ||||||||| |||||    
T  27407781 ttagcatgtgtaagatgttgtttgagttgtctcgataaata 27407741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 198 - 326
Target Start/End: Original strand, 3036984 - 3037112
Alignment:
Q  198 ccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattag 297  Q
    ||||| |||||||||||||||||  | || | ||||||| ||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  3036984 ccctctgtttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattag 3037083  T
Q  298 cgtgtaagatgttgtttgatttgtctcga 326  Q
    | ||||| || || |||||||||||||||    
T  3037084 catgtaaaatattatttgatttgtctcga 3037112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 36523230 - 36523090
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| |||||||||||||| |||||  | ||||||||| ||||||||| || |||||||||||||| ||| |||||||||||| |||||||||||||     
T  36523230 tactccatccgtttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatg 36523131  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||| | |||||||||||||| ||||| | |||| |||||||    
T  36523130 ttaacatgtaagatgttgttcgatttatttcgataaatatt 36523090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 37767221 - 37767080
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||| |||||  |||||  | ||||| ||| ||||||||| || |||||||||||||| ||| ||||||||  || |||||||||||||    
T  37767221 atactccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaaat 37767122  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     ||||  |||||||| ||||||||||||||||||||||||||    
T  37767121 gttagaatgtaagatattgtttgatttgtctcgacaaatatt 37767080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 39307696 - 39307836
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||| ||||||||||||||||||||  | ||||||||| | | |||||||| |||||||||||||   || |||||||||||| |||||||||||||     
T  39307696 tactccatccgtttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatg 39307795  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||  ||||| ||||||||| ||||||||| |||||||||    
T  39307796 ttagtatgtaaaatgttgtttaatttgtctcaacaaatatt 39307836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 19595736 - 19595845
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||| |||| |||||||||||||||||||||||| || ||| | |||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||    
T  19595736 ttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgtttgatttgtttc 19595835  T
Q  325 gacaaatatt 334  Q
     | |||||||    
T  19595836 aaaaaatatt 19595845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 2571133 - 2571004
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaa 304  Q
    ||||||||||||||||  | ||||  |||||||| ||||||| ||| ||| |||||| ||| |||||||||||| ||||||||||||| ||||| |||||    
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T
Q  305 gatgttgtttgatttgtctcgacaaatatt 334  Q
    ||| |  ||||||||||||| |||||||||    
T  2571033 gatataatttgatttgtctcaacaaatatt 2571004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 7614614 - 7614739
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||| ||||||||||||||||||||  | |||| |||| |  | || |||| ||||||| |||||| ||| |||||||||||| |||||||||||||    
T  7614614 atactccatccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaat 7614713  T
Q  293 attagcgtgtaagatgttgtttgatt 318  Q
     ||||| |||||||||||||||||||    
T  7614714 gttagcatgtaagatgttgtttgatt 7614739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 334
Target Start/End: Original strand, 30446307 - 30446437
Alignment:
Q  203 cgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgt 302  Q
    ||||||||||| ||||||  |  |||| ||| |||| ||||||| ||||||||||||||  || ||||| |||||| ||||||||||||| ||||| |||    
T  30446307 cgtttcaaaatgcatgtcgcatgtttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgt 30446405  T
Q  303 aagatgttgtttgatttgtctcgacaaatatt 334  Q
    || ||||||||||||||||||||||| |||||    
T  30446406 aaaatgttgtttgatttgtctcgacatatatt 30446437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 54610861 - 54610980
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcact-attcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||| ||||||||||||||| ||||  || ||||||||||| |||| |||||||||||||||||| |  ||| ||||||| ||||||||||||||| |    
T  54610861 atactctctccgtttcaaaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaatacaga 54610960  T
Q  292 tattagcgtgtaagatgttg 311  Q
    ||||||  ||||||||||||    
T  54610961 tattagtatgtaagatgttg 54610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 326
Target Start/End: Original strand, 38721336 - 38721469
Alignment:
Q  193 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||| ||| ||||||||||||  | |||| ||||||| | ||||||| ||||||| |||||  ||| |||||||| ||| |||||||||||||    
T  38721336 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 38721435  T
Q  293 attagcgtgtaagatgttgtttgatttgtctcga 326  Q
     ||||| ||||||||||||||  |||||| ||||    
T  38721436 gttagcatgtaagatgttgttcaatttgtttcga 38721469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 14144663 - 14144589
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||||||| | | |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  14144663 acttactttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgtttgatttgtctc 14144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 331
Target Start/End: Original strand, 5428571 - 5428713
Alignment:
Q  187 attttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaat 286  Q
    |||| |||||||  ||||||||||||||||||||  | ||| |||||||||||||||||| |||||||| ||||| ||| |||||||||||   ||||||    
T  5428571 atttaaatactctatccgtttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaa--cataaat 5428668  T
Q  287 acaaatattagcgtgtaagatgttgtttgatttgtctcgacaaat 331  Q
    | ||||  || | ||||||||||||||  |||||| |||| ||||    
T  5428669 ataaatgctatcatgtaagatgttgttccatttgtttcgataaat 5428713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 334
Target Start/End: Complemental strand, 19903874 - 19903772
Alignment:
Q  232 atgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaat 331  Q
    |||||||| |||||| | | |||||||||| |||  ||||||||||| ||||||||||||| ||||| ||| |||| ||||||||||||| |||| ||||    
T  19903874 atgtgcacgattcacataatttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgtttgatttgtttcgataaat 19903775  T
Q  332 att 334  Q
    |||    
T  19903774 att 19903772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 324
Target Start/End: Complemental strand, 20875499 - 20875379
Alignment:
Q  204 gtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgta 303  Q
    ||||||||||||||||   | ||||  |||||||||||||||  | | |||||||||| ||| |||||||||||| |||||||  |||| || || | ||    
T  20875499 gtttcaaaatacatgttgtaattttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgcatata 20875400  T
Q  304 agatgttgtttgatttgtctc 324  Q
    |||||||||||||||||||||    
T  20875399 agatgttgtttgatttgtctc 20875379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 50181116 - 50181200
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||| |  ||| ||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||| | |||||||    
T  50181116 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctcaataaatatt 50181200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 3280868 - 3281010
Alignment:
Q  19 acacaaaaaagagaaagtgaatgctttcaataaatgagtcccatcatcattaattattgtatactattttcgagattttt-tgtgtctttatctttctaa 117  Q
    |||||||||| ||| |||||||||||||||||||||  || | |  || ||||||||||||||   ||||| |||||||| ||||| |||||||||||||    
T  3280868 acacaaaaaa-agatagtgaatgctttcaataaatggatctcgttgtcgttaattattgtatatatttttcaagatttttgtgtgtttttatctttctaa 3280966  T
Q  118 attgcggaaattgagagaattgtaaatggagaggatctcaactc 161  Q
    || | ||||||  |||||||| |||||| ||| ||| |||||||    
T  3280967 atggaggaaatgaagagaattataaatgaagatgatttcaactc 3281010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 295
Target Start/End: Complemental strand, 34652303 - 34652208
Alignment:
Q  200 ctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatt 295  Q
    |||||||||||||||||||||  | ||||| |||||| |||||| ||  ||||||||| ||| ||| |||||||||||  ||||||||||||||||    
T  34652303 ctccgtttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 55091376 - 55091309
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||| |||| ||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||    
T  55091376 tttttaattaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtctcgataaatatt 55091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 334
Target Start/End: Complemental strand, 30191729 - 30191595
Alignment:
Q  195 actccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatat 294  Q
    |||| ||||||||||||||||||||   | |||| ||||||||||||||||| |  ||||||||     ||  |||| || ||| |||||||| |||| |    
T  30191729 actcactccgtttcaaaatacatgttgcaattttacaatgtgcactattcacatagcttacttt-----tatgtttttacgaatatataaatataaatgt 30191635  T
Q  295 tagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    || | |||||||| |||||||||||||||||| |||||||    
T  30191634 taacatgtaagatattgtttgatttgtctcgataaatatt 30191595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 34323076 - 34323198
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttt--taactaatgtataaatacaaatattagc 298  Q
    |||||||||||||||||| |  | ||||  |||||||| ||||||| ||||||||||| |  ||  ||||  ||||||||||||| | ||||||||||      
T  34323076 tccgtttcaaaatacatgacgcatttttataatgtgcattattcacatgacttactttaatcatgttttttttaactaatgtatacacacaaatattaat 34323175  T
Q  299 gtgtaagatgttgtttgatttgt 321  Q
     ||||||||||||||||||||||    
T  34323176 atgtaagatgttgtttgatttgt 34323198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 18207093 - 18207191
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    ||||||||||||||||||||  | |||  ||||| ||||||| |||||||||||||||| ||||||  |||||||||| |    |||||||||||||||    
T  18207093 gtcccatcatcattaattatattttacctttttcaagattttatgtgtctttatctttccaaattgaagaaattgagaaacacataaatggagaggatc 18207191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 56297948 - 56297834
Alignment:
Q  210 aaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgt 309  Q
    |||||||||||  | |||| |||||| || ||||||| | ||||  |||||| ||| || ||||||||| ||||||||||||| ||||| | ||| ||||    
T  56297948 aaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgt 56297849  T
Q  310 tgtttgatttgtctc 324  Q
    ||| |||||||||||    
T  56297848 tgtctgatttgtctc 56297834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 29051681 - 29051782
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||| | ||||||| |||||||||||   | |||| |||| | || ||||||| | |||||||||||| ||| |||||||||||| |||||||||||    
T  29051681 taatactacatccgttttaaaatacatgttgcaattttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaa 29051780  T
Q  291 at 292  Q
    ||    
T  29051781 at 29051782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 32871590 - 32871489
Alignment:
Q  225 ttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||||| ||| ||| |||||||||||||||  |||||  ||| |||||||||||| | ||||||||||| | ||  |||| ||||||||||||||||| ||    
T  32871590 ttttgtaatatgctctattcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgtttgatttgtttc 32871491  T
Q  325 ga 326  Q
    ||    
T  32871490 ga 32871489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 23360189 - 23360273
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaat 292  Q
    ||||||||||||||||  | ||||||||| |||||||||||  ||||||||||||||  || |||||||||||| ||| |||||||||    
T  23360189 tttcaaaatacatgtcgcatttttgcaatatgcactattca--tgacttactttgac-ctattttttaactaatatatgaatacaaat 23360273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 27344137 - 27344083
Alignment:
Q  267 tttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgt 321  Q
    |||||||||||| |||||||| |||||||| | | ||||||||||||||||||||    
T  27344137 tttttaactaatatataaataaaaatattaacatataagatgttgtttgatttgt 27344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 19897634 - 19897723
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaat 278  Q
    |||| |||||||| ||||||||||||| ||||  | |||| |||||| |||||||||| | |||||||||||| | | |||| |||||||    
T  19897634 tttagtactcccttcgtttcaaaatacttgtcgcaattttacaatgtacactattcacataacttactttgaccacatttttgaactaat 19897723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 26170253 - 26170220
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||||||    
T  26170253 ttaatactccctccgtttcaaaatacatgtccaa 26170220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 334
Target Start/End: Complemental strand, 29586063 - 29585967
Alignment:
Q  237 cactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||||| | ||||||||||||| || ||||||| |||| | ||||||||||| ||| | ||||| ||||| |||||||| |||| | |||||||    
T  29586063 cactattcacataacttactttgaca-tattttttaattaatatgtaaatacaaatgttaacatgtaaaatgttttttgatttatctcaataaatatt 29585967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 310
Target Start/End: Original strand, 34316524 - 34316636
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    |||||||| || |||||| |||||  | |||| || ||||||||||| |  |||||||||||||  ||| || ||||||||| ||||||||||||| |||    
T  34316524 tccctccgatttaaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgtta 34316622  T
Q  297 gcgtgtaagatgtt 310  Q
    || | |||||||||    
T  34316623 gcatataagatgtt 34316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 323
Target Start/End: Original strand, 50815007 - 50815091
Alignment:
Q  240 tattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagat-gttgtttgatttgtct 323  Q
    ||||||| | |||||||||||   || ||||||||| || ||||||||||||||||| |||||| |||  |||||||||||||||    
T  50815007 tattcacataacttactttgattttattttttaacttatatataaatacaaatattaacgtgtatgatatttgtttgatttgtct 50815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 326
Target Start/End: Complemental strand, 51355307 - 51355168
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaata--atttttaactaatgtataaat 286  Q
    ||||||||| | ||||||| ||||||||||||  |||||  |||| |||| || |||  | | |||||||||| |||  ||||||| ||||| |||||||    
T  51355307 tttaatacttcatccgtttgaaaatacatgtcgcactttaacaatatgcattactcatgtaatttactttgaccatataatttttagctaatatataaat 51355208  T
Q  287 acaaatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    |||||| ||||  | || |||||||||  |||||||||||    
T  51355207 acaaatgttagtatatacgatgttgttcaatttgtctcga 51355168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 326
Target Start/End: Original strand, 10550422 - 10550555
Alignment:
Q  192 aatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttt--taactaatgtataaataca 289  Q
    ||||||||||| |||| ||||||  |||   | |||| |||| |||||||||||| ||  ||||||| || ||| ||||  |||||||| |||||||| |    
T  10550422 aatactccctctgttttaaaatatctgttgcaattttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaa 10550521  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    ||| ||||| |||||||   |||||||||||||||||    
T  10550522 aatgttagcatgtaaga---tgtttgatttgtctcga 10550555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 12153193 - 12153095
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||  ||||| |||| |    |||||||||||||||    
T  12153193 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 12153095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 34652192 - 34652158
Alignment:
Q  280 tataaatacaaatattagcgtgtaagatgttgttt 314  Q
    ||||||||||||||||||| |||||||||||||||    
T  34652192 tataaatacaaatattagcatgtaagatgttgttt 34652158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Original strand, 35686513 - 35686547
Alignment:
Q  300 tgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||||||||||||||||| |||||||||    
T  35686513 tgtaagatgttgtttgatttgtctcaacaaatatt 35686547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 45292099 - 45292065
Alignment:
Q  189 tttaatactccctccgtttcaaaatacatgtccaa 223  Q
    |||| ||||||||||||||||||||||||||||||    
T  45292099 tttagtactccctccgtttcaaaatacatgtccaa 45292065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 56558301 - 56558203
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    |||||| |||||||||||||  | |||| ||||| | ||||| ||||||||||||| || ||||||  ||||| |||| |  | |||||||||||||||    
T  56558301 gtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatagagaaacatataaatggagaggatc 56558203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 2760730 - 2760759
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  2760730 tactccctccgtttcaaaatacatgtccaa 2760759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 4467520 - 4467549
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  4467520 tactccctccgtttcaaaatacatgtccaa 4467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 12071560 - 12071589
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  12071560 atactccctccgtttcaaaatacatgtcca 12071589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 12241461 - 12241526
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||    
T  12241461 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattg 12241526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 14261043 - 14261072
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  14261043 atactccctccgtttcaaaatacatgtcca 14261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 19433358 - 19433387
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  19433358 tactccctccgtttcaaaatacatgtccaa 19433387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 21310424 - 21310453
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  21310424 atactccctccgtttcaaaatacatgtcca 21310453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 25101731 - 25101824
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagc 298  Q
    |||||||||||||||   | |||||||||||| | |||| |  ||| ||| |||||| ||| |||||||||||  ||||||| |||||||||||    
T  25101731 tttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaaatattagc 25101824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 25704650 - 25704679
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  25704650 atactccctccgtttcaaaatacatgtcca 25704679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 38416650 - 38416679
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  38416650 tactccctccgtttcaaaatacatgtccaa 38416679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 40122763 - 40122734
Alignment:
Q  193 atactccctccgtttcaaaatacatgtcca 222  Q
    ||||||||||||||||||||||||||||||    
T  40122763 atactccctccgtttcaaaatacatgtcca 40122734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 44232077 - 44232106
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  44232077 tactccctccgtttcaaaatacatgtccaa 44232106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 55209574 - 55209603
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  55209574 tactccctccgtttcaaaatacatgtccaa 55209603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 4404284 - 4404212
Alignment:
Q  94 ttttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatctcaactcaaaat 166  Q
    |||| ||||||||||||||||||||| | |||||| |||||     ||||||||||||||||  |||||||||    
T  4404284 ttttatgtgtctttatctttctaaatggaggaaatggagagggaaataaatggagaggatcttgactcaaaat 4404212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 12625516 - 12625488
Alignment:
Q  191 taatactccctccgtttcaaaatacatgt 219  Q
    |||||||||||||||||||||||||||||    
T  12625516 taatactccctccgtttcaaaatacatgt 12625488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 326
Target Start/End: Original strand, 27755730 - 27755855
Alignment:
Q  205 tttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaa----tgtataaatacaaatattagcgt 300  Q
    ||||||||||||||||  | ||||| ||||| || | ||||  | ||||| |||||| ||| |||||||||||    | ||||||||||||| |||||      
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatatatataaatacaaatgttagcac 27755829  T
Q  301 gtaagatgttgtttgatttgtctcga 326  Q
    |||||||||||||  |||||| ||||    
T  27755830 gtaagatgttgttcaatttgtttcga 27755855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 34324860 - 34324832
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  34324860 tactccctccgtttcaaaatacatgtcca 34324832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 326
Target Start/End: Complemental strand, 35064167 - 35064107
Alignment:
Q  266 atttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcga 326  Q
    |||||| |||||| || ||||| ||| |||| | ||||||||||||||||||| |||||||    
T  35064167 attttttactaatatacaaatataaacattatcatgtaagatgttgtttgattcgtctcga 35064107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 39862546 - 39862474
Alignment:
Q  49 taaatgagtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    ||||||||| ||| |||||||||||||  | |||| ||||  ||||||| ||||||||||||| || ||||||    
T  39862546 taaatgagttccaccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattg 39862474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 56080019 - 56080079
Alignment:
Q  231 aatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    |||||||||||||| | | | |||||||||| ||| |||||||||||| |||| |||||||    
T  56080019 aatgtgcactattcgcataatttactttgactatattttttaactaatatatacatacaaa 56080079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 162102 - 161959
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  162102 taatactccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaa 162003  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||    
T  162002 atattagcatgtaagatgttgtttaatttgtttcgacaaatatt 161959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 197 - 334
Target Start/End: Complemental strand, 68028 - 67891
Alignment:
Q  197 tccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatatta 296  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  68028 tccctacgtttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 67929  T
Q  297 gcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
     | |||||||||||||||||||||||||||||||||||    
T  67928 acatgtaagatgttgtttgatttgtctcgacaaatatt 67891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 13982 - 13839
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||||||||||||| |||||||||||| ||  |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||    
T  13982 taatactccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataa 13883  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  13882 atattagcatgtaagatgttgtttaatttgtctcgacaaatatt 13839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 9369 - 9433
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttac 255  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  9369 taatactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttac 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 70961 - 71100
Alignment:
Q  194 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaata 293  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  70961 tactccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaata 71059  T
Q  294 ttagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||| | ||||||||||||||||||||||| |||||||||    
T  71060 ttagcatttaagatgttgtttgatttgtctcaacaaatatt 71100  T

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Target: scaffold0225 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 324
Target Start/End: Complemental strand, 9099 - 8965
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    |||||||| | ||||||||| ||||||| ||  | |||| |||| |||| ||||||| | |||||||||||| | | |||||||||||| ||||||||||    
T  9099 ttaatacttcatccgtttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaataca 9000  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||| ||||| |||||||||||||||||||||||||    
T  8999 aatgttagcatgtaagatgttgtttgatttgtctc 8965  T

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Target: scaffold0099 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 323
Target Start/End: Complemental strand, 28916 - 28784
Alignment:
Q  194 tactccctccgtttcaaaa-tacatgtccaacttttgcaatgtgca-ctattcacttgacttactttgacaataatttttaactaatgtataaatacaaa 291  Q
    ||||||||||||||||||| ||||||||  | |||| ||||||||| |||||||| |  ||||||||||| ||| |||||||||||| ||||||||||||    
T  28916 tactccctccgtttcaaaaatacatgtcatagttttacaatgtgcaactattcacatagcttactttgaccatattttttaactaatttataaatacaaa 28817  T
Q  292 tattagcgtgtaagatg-ttgtttgatttgtct 323  Q
    ||||||| | ||||||| |||||||||||||||    
T  28816 tattagcatataagatgtttgtttgatttgtct 28784  T

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Target: scaffold0029 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 324
Target Start/End: Complemental strand, 138296 - 138162
Alignment:
Q  190 ttaatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaataca 289  Q
    |||||||| | ||| ||||| ||||||| ||  | |||| |||| |||| ||||||| | |||||||||||| | | |||||||||||| ||||||||||    
T  138296 ttaatacttcatccctttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaataca 138197  T
Q  290 aatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    ||| ||||| |||||||||||||||||||||||||    
T  138196 aatgttagcatgtaagatgttgtttgatttgtctc 138162  T

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Target: scaffold0262 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 324
Target Start/End: Original strand, 22777 - 22910
Alignment:
Q  191 taatactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataatttttaactaatgtataaatacaa 290  Q
    ||||||| | ||||||||| ||||||| ||  | |||| |||| |||| ||||||| | ||||| |||||| | | ||||||||| || |||||||||||    
T  22777 taatacttcatccgtttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaa 22876  T
Q  291 atattagcgtgtaagatgttgtttgatttgtctc 324  Q
    || ||||| |||||||||||||||||||||||||    
T  22877 atgttagcatgtaagatgttgtttgatttgtctc 22910  T

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Target: scaffold0595 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 334
Target Start/End: Original strand, 3990 - 4089
Alignment:
Q  236 gcactattcacttgacttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaaga-tgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||||| |  ||||||||||| ||| |||||||||||| ||||||||||||| ||||| ||||||| | || ||||||||||||||| |||||||    
T  3990 gcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgttagcatgtaagattattttttgatttgtctcgataaatatt 4089  T

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Target: scaffold0608 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 1576 - 1660
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    ||||||||| |  ||| ||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||| | |||||||    
T  1576 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctcaataaatatt 1660  T

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Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 217131 - 217007
Alignment:
Q  201 tccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttgacttactttgacaataattttt-aactaatgtataaatacaaatattagcg 299  Q
    |||||||||||||||| |||  | |||| ||||||||| ||||| | | |||||  ||||| ||| ||||| || |||| ||||||||||||| |||||     
T  217131 tccgtttcaaaatacaagtcgcaattttacaatgtgcaatattctcataacttatgttgaccatatttttttaagtaatatataaatacaaatgttagca 217032  T
Q  300 tgtaagatgttgtttgatttgtctc 324  Q
    | |||||||||||||||||||||||    
T  217031 tataagatgttgtttgatttgtctc 217007  T

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Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 53626 - 53542
Alignment:
Q  250 acttactttgacaataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctcgacaaatatt 334  Q
    |||| ||||||  ||| |||||||||||| ||||| ||||||| ||||| || ||||||||||||||||||| |||| |||||||    
T  53626 acttgctttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgtttgatttgtttcgataaatatt 53542  T

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Target: scaffold0468 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 5633 - 5534
Alignment:
Q  55 agtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    |||||||||||||||||||||| |||||| ||||| |  || ||| ||||||||||| || |||| |  |||||  |||| ||  |||||||||||||||    
T  5633 agtcccatcatcattaattattttatacttttttcaaacttctttatgtctttatctctccaaatggaagaaatgaagaggatcataaatggagaggatc 5534  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 315673 - 315634
Alignment:
Q  285 atacaaatattagcgtgtaagatgttgtttgatttgtctc 324  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  315673 atacaaatgttagcatgtaagatgttgtttgatttgtctc 315634  T

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Target: scaffold0456 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 13718 - 13640
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagag 134  Q
    |||||| |||||||||||||  | |||| ||||| ||||||| ||||||||||||| || ||||||  ||||| |||||    
T  13718 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagag 13640  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 208085 - 207987
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatc 154  Q
    ||||||||||||||||||||  | |||| ||||  ||||||| ||||||||||||| || ||||||  ||||| |||| |    |||||||||||||||    
T  208085 gtcccatcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 207987  T

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Target: scaffold0744 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 1161 - 1222
Alignment:
Q  94 ttttttgtgtctttatctttctaaattgcggaaattgagagaattgtaaatggagaggatct 155  Q
    |||||||| ||||||||| || || | | |||||| |||| |||||||||||||||||||||    
T  1161 ttttttgtatctttatctctcaaattggaggaaatggagacaattgtaaatggagaggatct 1222  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 73893 - 73958
Alignment:
Q  56 gtcccatcatcattaattattgtatactattttcgagattttttgtgtctttatctttctaaattg 121  Q
    ||||||||||||||||||||  | || | ||||| ||||||| ||||| ||||||| |||||||||    
T  73893 gtcccatcatcattaattatattttatttttttcaagattttatgtgtttttatctctctaaattg 73958  T

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Target: scaffold0257 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 23467 - 23495
Alignment:
Q  194 tactccctccgtttcaaaatacatgtcca 222  Q
    |||||||||||||||||||||||||||||    
T  23467 tactccctccgtttcaaaatacatgtcca 23495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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