View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4476_high_9 (Length: 251)
Name: NF4476_high_9
Description: NF4476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4476_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 41760082 - 41759871
Alignment:
| Q |
18 |
cagagaggaaaaggagtaccttggagagtacacactcgcgcaatgaattcaaaagagcgaggcatttatctttatcgtacgacggataatctgtaacgca |
117 |
Q |
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| T |
41760082 |
cagagaggaaaaggagtaccttggagagtacacactcgcgcaatgaattcaaaagagcgaggcatttatctttatcgtacgacggagaatctgtaacgca |
41759983 |
T |
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| Q |
118 |
attcagcagatcgagagcttcttggccgcacactggtttcgcaccaccttcgtccattctcaatttttagggtttttgagtcaaatttgtaagatttttc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
41759982 |
attcagcagatcgagagcttcttggccgcacactggtttcgcaccaccttcgtccattctcaatttttagggtttttgagtcaaatttg-aagatttttc |
41759884 |
T |
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| Q |
218 |
aattgcaagctaa |
230 |
Q |
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|||| |||||||| |
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| T |
41759883 |
aattacaagctaa |
41759871 |
T |
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