View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4476_low_17 (Length: 229)

Name: NF4476_low_17
Description: NF4476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4476_low_17
NF4476_low_17
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-74)||(100647-100720)
[»] chr6 (41 HSPs)
chr6 (1-76)||(32672005-32672080)
chr6 (1-77)||(18668685-18668761)
chr6 (1-75)||(24623940-24624014)
chr6 (1-74)||(20226298-20226371)
chr6 (1-74)||(21540629-21540702)
chr6 (1-74)||(22054961-22055034)
chr6 (1-74)||(22120282-22120355)
chr6 (1-77)||(12226164-12226240)
chr6 (1-75)||(19087957-19088031)
chr6 (1-75)||(20437016-20437090)
chr6 (1-76)||(17213790-17213865)
chr6 (1-67)||(32414686-32414752)
chr6 (1-74)||(1041013-1041086)
chr6 (9-64)||(4148128-4148183)
chr6 (1-75)||(6563415-6563489)
chr6 (8-74)||(24955396-24955462)
chr6 (1-74)||(17257651-17257724)
chr6 (158-205)||(24623333-24623380)
chr6 (1-75)||(2360179-2360253)
chr6 (1-51)||(10520657-10520707)
chr6 (1-74)||(3989266-3989338)
chr6 (158-203)||(12204369-12204414)
chr6 (158-203)||(20720797-20720842)
chr6 (164-212)||(32053779-32053827)
chr6 (164-211)||(655771-655818)
chr6 (164-203)||(18256883-18256922)
chr6 (164-203)||(20744138-20744177)
chr6 (158-205)||(24827050-24827097)
chr6 (164-203)||(29069483-29069522)
chr6 (45-79)||(4147926-4147960)
chr6 (164-202)||(24212561-24212599)
chr6 (45-79)||(32671811-32671845)
chr6 (164-205)||(361752-361793)
chr6 (164-201)||(10902342-10902379)
chr6 (164-204)||(2692214-2692254)
chr6 (164-204)||(26522471-26522511)
chr6 (1-37)||(28477942-28477978)
chr6 (1-37)||(29790395-29790431)
chr6 (45-77)||(32414912-32414944)
chr6 (45-77)||(32420753-32420785)
chr6 (164-208)||(33938701-33938745)
[»] chr1 (69 HSPs)
chr1 (1-76)||(36399287-36399362)
chr1 (1-81)||(40977481-40977561)
chr1 (1-75)||(9342644-9342718)
chr1 (1-74)||(52024215-52024288)
chr1 (1-76)||(25171342-25171417)
chr1 (1-75)||(11641066-11641140)
chr1 (1-75)||(36757485-36757559)
chr1 (1-75)||(40771771-40771845)
chr1 (1-76)||(17306143-17306218)
chr1 (1-74)||(30701907-30701980)
chr1 (1-77)||(6766558-6766634)
chr1 (1-64)||(6402420-6402483)
chr1 (5-67)||(15912345-15912407)
chr1 (1-67)||(42367303-42367369)
chr1 (1-74)||(16120439-16120512)
chr1 (1-74)||(30003723-30003796)
chr1 (1-65)||(27292829-27292893)
chr1 (1-74)||(42735165-42735238)
chr1 (1-74)||(42788543-42788616)
chr1 (1-77)||(22575584-22575660)
chr1 (1-79)||(48375192-48375269)
chr1 (158-207)||(10841896-10841945)
chr1 (1-47)||(4302304-4302350)
chr1 (164-205)||(8253737-8253778)
chr1 (164-203)||(13794530-13794569)
chr1 (156-203)||(15602191-15602238)
chr1 (164-203)||(16967216-16967255)
chr1 (158-205)||(17917154-17917201)
chr1 (164-211)||(23953169-23953215)
chr1 (164-203)||(26755616-26755655)
chr1 (164-203)||(27449467-27449506)
chr1 (164-203)||(42045394-42045433)
chr1 (164-203)||(44641527-44641566)
chr1 (164-203)||(45140028-45140067)
chr1 (164-210)||(3777711-3777757)
chr1 (164-206)||(25086480-25086522)
chr1 (164-210)||(28832193-28832239)
chr1 (45-75)||(30003532-30003562)
chr1 (164-206)||(32944733-32944775)
chr1 (158-204)||(41926821-41926867)
chr1 (164-206)||(48100719-48100761)
chr1 (158-203)||(2613722-2613767)
chr1 (164-205)||(3393590-3393631)
chr1 (164-209)||(3509963-3510008)
chr1 (158-203)||(3693812-3693857)
chr1 (158-203)||(10292936-10292981)
chr1 (164-209)||(15382841-15382886)
chr1 (158-203)||(17139533-17139578)
chr1 (158-203)||(17396708-17396753)
chr1 (169-206)||(21965919-21965956)
chr1 (167-212)||(29451007-29451052)
chr1 (158-203)||(34485877-34485922)
chr1 (164-205)||(34521212-34521253)
chr1 (45-74)||(36399098-36399127)
chr1 (158-203)||(39252273-39252318)
chr1 (46-79)||(41959822-41959855)
chr1 (46-79)||(47038099-47038132)
chr1 (164-205)||(49868009-49868050)
chr1 (158-203)||(51127906-51127951)
chr1 (158-206)||(4770644-4770692)
chr1 (136-211)||(5552992-5553070)
chr1 (45-77)||(6402643-6402675)
chr1 (46-74)||(13985016-13985044)
chr1 (158-202)||(17188684-17188728)
chr1 (167-203)||(24752673-24752709)
chr1 (159-203)||(29701337-29701381)
chr1 (158-206)||(33153896-33153944)
chr1 (164-204)||(34808585-34808625)
chr1 (1-77)||(38153274-38153350)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-79)||(67765-67843)
[»] chr7 (64 HSPs)
chr7 (1-75)||(32431357-32431431)
chr7 (1-67)||(16778694-16778760)
chr7 (1-79)||(28061510-28061588)
chr7 (1-78)||(47156216-47156293)
chr7 (1-77)||(25566545-25566621)
chr7 (1-67)||(11502587-11502653)
chr7 (1-79)||(41898177-41898255)
chr7 (1-79)||(46103365-46103443)
chr7 (1-74)||(3851263-3851336)
chr7 (1-74)||(20885292-20885365)
chr7 (1-74)||(36623497-36623570)
chr7 (1-73)||(48602625-48602697)
chr7 (1-67)||(39129933-39129999)
chr7 (4-64)||(42877578-42877638)
chr7 (1-76)||(36585851-36585926)
chr7 (1-76)||(42890342-42890417)
chr7 (1-76)||(46321150-46321225)
chr7 (1-67)||(40089925-40089991)
chr7 (1-74)||(38851847-38851920)
chr7 (1-65)||(40256245-40256309)
chr7 (1-63)||(6175015-6175077)
chr7 (1-72)||(7439092-7439163)
chr7 (1-79)||(5788372-5788450)
chr7 (1-79)||(30342262-30342340)
chr7 (158-205)||(42043082-42043129)
chr7 (1-79)||(23707418-23707496)
chr7 (1-71)||(44732201-44732270)
chr7 (164-203)||(35142171-35142210)
chr7 (159-210)||(43346581-43346632)
chr7 (1-79)||(21379933-21380011)
chr7 (1-75)||(36516028-36516102)
chr7 (14-64)||(41950790-41950840)
chr7 (159-203)||(5526725-5526769)
chr7 (1-65)||(7169312-7169376)
chr7 (164-204)||(21105602-21105642)
chr7 (159-203)||(21597680-21597724)
chr7 (159-203)||(26825414-26825458)
chr7 (158-206)||(43539120-43539168)
chr7 (158-210)||(48069853-48069905)
chr7 (164-203)||(5317310-5317349)
chr7 (164-203)||(10244727-10244766)
chr7 (164-203)||(39801706-39801745)
chr7 (164-203)||(39926560-39926599)
chr7 (164-203)||(48980487-48980526)
chr7 (164-210)||(429200-429246)
chr7 (164-206)||(3672574-3672616)
chr7 (164-206)||(22991413-22991455)
chr7 (164-202)||(38841988-38842026)
chr7 (9-74)||(7457745-7457810)
chr7 (164-205)||(8615021-8615062)
chr7 (158-203)||(21164774-21164819)
chr7 (158-203)||(34000262-34000307)
chr7 (158-203)||(37451253-37451298)
chr7 (164-209)||(40303264-40303309)
chr7 (45-74)||(42890576-42890605)
chr7 (164-208)||(5458093-5458137)
chr7 (45-77)||(16778502-16778534)
chr7 (167-203)||(20243255-20243291)
chr7 (164-208)||(21050244-21050288)
chr7 (158-202)||(24656971-24657015)
chr7 (164-204)||(24991780-24991820)
chr7 (164-212)||(27068179-27068227)
chr7 (164-212)||(27210086-27210134)
chr7 (170-214)||(31038550-31038594)
[»] chr4 (72 HSPs)
chr4 (1-79)||(19433353-19433431)
chr4 (1-74)||(35686596-35686669)
chr4 (1-77)||(26170176-26170252)
chr4 (1-75)||(47386285-47386359)
chr4 (1-66)||(17446641-17446706)
chr4 (1-74)||(38416650-38416723)
chr4 (1-74)||(43967912-43967985)
chr4 (1-74)||(45292021-45292094)
chr4 (1-77)||(12625440-12625516)
chr4 (4-74)||(17610472-17610542)
chr4 (1-74)||(2760730-2760803)
chr4 (1-74)||(4467520-4467593)
chr4 (1-74)||(38721526-38721599)
chr4 (1-74)||(44232077-44232150)
chr4 (1-74)||(55209574-55209647)
chr4 (1-74)||(25296579-25296652)
chr4 (1-76)||(35380892-35380967)
chr4 (1-76)||(54330688-54330763)
chr4 (1-75)||(9029448-9029522)
chr4 (1-79)||(55192013-55192091)
chr4 (1-74)||(55800988-55801061)
chr4 (1-65)||(12240186-12240250)
chr4 (9-67)||(26125905-26125963)
chr4 (9-75)||(29830540-29830606)
chr4 (1-67)||(50620493-50620559)
chr4 (164-211)||(16743306-16743353)
chr4 (164-214)||(20383477-20383527)
chr4 (1-68)||(25918392-25918456)
chr4 (164-203)||(24665013-24665052)
chr4 (158-208)||(6459940-6459990)
chr4 (164-206)||(19854562-19854604)
chr4 (158-203)||(2034111-2034156)
chr4 (158-203)||(11198764-11198809)
chr4 (158-210)||(7282550-7282602)
chr4 (164-212)||(52270052-52270100)
chr4 (164-203)||(2186355-2186394)
chr4 (164-203)||(12698597-12698636)
chr4 (158-209)||(23160034-23160085)
chr4 (164-211)||(28435270-28435317)
chr4 (1-76)||(30446490-30446565)
chr4 (167-206)||(35997996-35998035)
chr4 (164-203)||(36203236-36203275)
chr4 (164-203)||(39171392-39171431)
chr4 (164-203)||(43155079-43155118)
chr4 (164-203)||(43374294-43374333)
chr4 (159-205)||(2580731-2580777)
chr4 (1-75)||(4455482-4455556)
chr4 (164-206)||(6087744-6087786)
chr4 (158-200)||(10204843-10204885)
chr4 (164-202)||(11949785-11949823)
chr4 (164-206)||(19479499-19479541)
chr4 (164-206)||(22040647-22040689)
chr4 (167-205)||(24479337-24479375)
chr4 (46-76)||(24706496-24706526)
chr4 (164-206)||(30135137-30135179)
chr4 (158-212)||(54500560-54500614)
chr4 (158-203)||(2587716-2587761)
chr4 (158-203)||(14202495-14202540)
chr4 (164-205)||(38297940-38297981)
chr4 (164-205)||(38416055-38416096)
chr4 (158-203)||(54587900-54587945)
chr4 (159-203)||(2932123-2932167)
chr4 (14-62)||(3037140-3037188)
chr4 (164-204)||(3936626-3936666)
chr4 (8-64)||(5428772-5428828)
chr4 (156-208)||(21649273-21649325)
chr4 (158-202)||(22411765-22411809)
chr4 (158-202)||(36478992-36479036)
chr4 (165-201)||(39146644-39146680)
chr4 (164-204)||(42756128-42756168)
chr4 (164-204)||(50442769-50442809)
chr4 (158-210)||(56096197-56096249)
[»] scaffold0056 (1 HSPs)
scaffold0056 (3-76)||(71151-71224)
[»] chr3 (62 HSPs)
chr3 (1-74)||(6910523-6910596)
chr3 (73-210)||(36354454-36354587)
chr3 (1-75)||(21005482-21005556)
chr3 (1-75)||(27010473-27010547)
chr3 (1-74)||(20765385-20765458)
chr3 (1-74)||(28690437-28690510)
chr3 (1-74)||(42761483-42761556)
chr3 (1-77)||(13499332-13499408)
chr3 (1-64)||(38138014-38138077)
chr3 (1-75)||(27334730-27334804)
chr3 (1-75)||(39866140-39866214)
chr3 (8-72)||(42490198-42490262)
chr3 (2-73)||(36227735-36227806)
chr3 (1-67)||(33415988-33416054)
chr3 (1-74)||(32221022-32221095)
chr3 (1-74)||(43467742-43467815)
chr3 (1-78)||(42345587-42345664)
chr3 (1-69)||(21797745-21797813)
chr3 (1-67)||(19824487-19824553)
chr3 (1-79)||(44561973-44562051)
chr3 (159-206)||(3612199-3612246)
chr3 (26-79)||(34822227-34822280)
chr3 (1-65)||(15332815-15332879)
chr3 (1-57)||(30213992-30214048)
chr3 (1-61)||(43181369-43181429)
chr3 (164-206)||(53996296-53996338)
chr3 (164-201)||(20537884-20537921)
chr3 (158-211)||(42269290-42269343)
chr3 (164-209)||(55066622-55066667)
chr3 (136-203)||(20370272-20370342)
chr3 (1-65)||(54507830-54507894)
chr3 (158-209)||(5117202-5117253)
chr3 (164-203)||(7974534-7974573)
chr3 (164-203)||(10498717-10498756)
chr3 (164-203)||(20413774-20413813)
chr3 (164-203)||(21331439-21331478)
chr3 (169-203)||(10617553-10617587)
chr3 (164-210)||(14827518-14827564)
chr3 (1-63)||(26406018-26406080)
chr3 (164-202)||(29631187-29631225)
chr3 (164-202)||(33404229-33404267)
chr3 (164-206)||(38130981-38131023)
chr3 (158-203)||(7827508-7827553)
chr3 (158-203)||(7829896-7829941)
chr3 (164-205)||(9321427-9321468)
chr3 (164-205)||(19468449-19468490)
chr3 (1-74)||(21083176-21083249)
chr3 (158-203)||(21160052-21160097)
chr3 (164-201)||(24428495-24428532)
chr3 (164-205)||(25441522-25441563)
chr3 (158-203)||(46469277-46469322)
chr3 (169-206)||(48263992-48264029)
chr3 (164-200)||(977963-977999)
chr3 (158-202)||(6000684-6000728)
chr3 (45-81)||(6910327-6910363)
chr3 (171-211)||(15881082-15881122)
chr3 (164-200)||(21549041-21549077)
chr3 (164-204)||(30200825-30200865)
chr3 (1-65)||(33803711-33803775)
chr3 (167-203)||(47313397-47313433)
chr3 (158-202)||(50980067-50980111)
chr3 (158-202)||(51083201-51083245)
[»] chr2 (52 HSPs)
chr2 (1-79)||(5405185-5405263)
chr2 (1-77)||(7608238-7608314)
chr2 (1-77)||(19141063-19141139)
chr2 (1-75)||(33607561-33607635)
chr2 (1-74)||(2182960-2183033)
chr2 (1-74)||(13125145-13125218)
chr2 (1-74)||(44365346-44365419)
chr2 (1-74)||(11841593-11841666)
chr2 (1-63)||(9172157-9172219)
chr2 (1-79)||(8042017-8042095)
chr2 (1-63)||(36072363-36072425)
chr2 (1-65)||(36719333-36719397)
chr2 (1-47)||(39358324-39358370)
chr2 (10-78)||(24093069-24093137)
chr2 (1-76)||(7800036-7800111)
chr2 (8-74)||(36177580-36177646)
chr2 (1-65)||(32774781-32774845)
chr2 (164-211)||(9519736-9519783)
chr2 (164-203)||(10195684-10195723)
chr2 (164-203)||(33063986-33064025)
chr2 (164-206)||(29734688-29734730)
chr2 (158-203)||(28202297-28202342)
chr2 (158-206)||(4238756-4238804)
chr2 (164-203)||(1861831-1861870)
chr2 (164-203)||(7262806-7262845)
chr2 (164-203)||(9383231-9383270)
chr2 (164-203)||(10332297-10332336)
chr2 (164-207)||(20120743-20120786)
chr2 (164-203)||(25186264-25186303)
chr2 (164-203)||(27244657-27244696)
chr2 (164-211)||(29599931-29599978)
chr2 (164-203)||(39068730-39068769)
chr2 (1-75)||(11931854-11931928)
chr2 (164-206)||(40853840-40853882)
chr2 (165-203)||(44526128-44526166)
chr2 (45-78)||(2183190-2183223)
chr2 (158-203)||(3196560-3196605)
chr2 (158-203)||(5028856-5028901)
chr2 (45-74)||(7608049-7608078)
chr2 (166-203)||(19967418-19967455)
chr2 (158-203)||(41165435-41165480)
chr2 (158-206)||(6765607-6765655)
chr2 (164-212)||(7302163-7302211)
chr2 (164-200)||(7350549-7350585)
chr2 (164-200)||(9547431-9547467)
chr2 (164-212)||(9581308-9581356)
chr2 (164-204)||(16204839-16204879)
chr2 (164-212)||(16877115-16877163)
chr2 (164-212)||(16989246-16989294)
chr2 (164-208)||(20565097-20565141)
chr2 (164-208)||(25598584-25598628)
chr2 (34-74)||(39358389-39358429)
[»] chr8 (49 HSPs)
chr8 (1-74)||(14237469-14237542)
chr8 (1-72)||(42587250-42587321)
chr8 (1-78)||(623365-623442)
chr8 (1-80)||(132206-132285)
chr8 (8-75)||(40494580-40494647)
chr8 (1-78)||(616972-617049)
chr8 (1-74)||(36641858-36641931)
chr8 (1-75)||(18044614-18044689)
chr8 (1-76)||(24524274-24524349)
chr8 (1-75)||(41263999-41264073)
chr8 (1-77)||(5878505-5878581)
chr8 (1-67)||(38957359-38957425)
chr8 (3-73)||(3100492-3100562)
chr8 (1-67)||(24287949-24288015)
chr8 (8-74)||(38958761-38958827)
chr8 (1-77)||(2766045-2766121)
chr8 (1-64)||(8394535-8394598)
chr8 (1-75)||(4270107-4270181)
chr8 (1-63)||(22489285-22489347)
chr8 (158-211)||(574376-574429)
chr8 (1-37)||(32998638-32998674)
chr8 (164-203)||(27718916-27718955)
chr8 (158-203)||(6038291-6038336)
chr8 (1-76)||(11637971-11638043)
chr8 (164-205)||(30427729-30427770)
chr8 (1-74)||(33700073-33700146)
chr8 (164-203)||(33451371-33451410)
chr8 (164-206)||(2554234-2554276)
chr8 (8-74)||(4461471-4461537)
chr8 (164-206)||(7996937-7996979)
chr8 (164-206)||(12910828-12910870)
chr8 (1-75)||(18021058-18021132)
chr8 (1-75)||(18035287-18035361)
chr8 (164-206)||(18942915-18942957)
chr8 (1-65)||(33921680-33921741)
chr8 (1-63)||(35403706-35403768)
chr8 (45-74)||(18044425-18044454)
chr8 (164-209)||(37750021-37750066)
chr8 (1-74)||(40204722-40204795)
chr8 (158-203)||(41625194-41625239)
chr8 (45-77)||(616780-616812)
chr8 (45-77)||(623173-623205)
chr8 (158-206)||(6235567-6235615)
chr8 (164-204)||(8910003-8910043)
chr8 (164-204)||(24696028-24696068)
chr8 (164-204)||(30623292-30623332)
chr8 (164-204)||(32051554-32051594)
chr8 (45-77)||(35403513-35403545)
chr8 (159-203)||(44293575-44293619)
[»] chr5 (50 HSPs)
chr5 (1-77)||(9502624-9502700)
chr5 (1-75)||(27109877-27109951)
chr5 (1-74)||(978266-978339)
chr5 (1-74)||(14634157-14634230)
chr5 (1-74)||(33387408-33387481)
chr5 (5-67)||(11251307-11251369)
chr5 (1-66)||(18094089-18094154)
chr5 (1-74)||(40156387-40156462)
chr5 (1-72)||(30354872-30354943)
chr5 (1-67)||(7224354-7224420)
chr5 (12-74)||(8086031-8086093)
chr5 (2-75)||(12446866-12446939)
chr5 (1-75)||(33587468-33587542)
chr5 (1-75)||(25889452-25889526)
chr5 (1-67)||(34112146-34112212)
chr5 (164-210)||(39610363-39610409)
chr5 (1-74)||(38916253-38916326)
chr5 (159-203)||(22394035-22394079)
chr5 (158-212)||(17672316-17672370)
chr5 (158-203)||(10199019-10199064)
chr5 (158-211)||(17239397-17239450)
chr5 (164-209)||(19068461-19068506)
chr5 (158-211)||(23118067-23118120)
chr5 (158-203)||(26409253-26409298)
chr5 (167-212)||(32283570-32283615)
chr5 (1-65)||(11785735-11785799)
chr5 (164-203)||(25604022-25604061)
chr5 (164-203)||(37932330-37932369)
chr5 (164-203)||(40715971-40716010)
chr5 (1-75)||(3472276-3472350)
chr5 (45-79)||(8086263-8086297)
chr5 (164-210)||(8545011-8545057)
chr5 (164-206)||(10704353-10704395)
chr5 (4-74)||(12007507-12007577)
chr5 (164-206)||(16188821-16188863)
chr5 (164-206)||(16188923-16188965)
chr5 (45-79)||(33587702-33587736)
chr5 (158-203)||(5614765-5614810)
chr5 (164-205)||(16076429-16076470)
chr5 (164-209)||(16133087-16133132)
chr5 (164-205)||(20927637-20927678)
chr5 (158-203)||(29695015-29695060)
chr5 (46-79)||(36561348-36561381)
chr5 (165-209)||(4573082-4573126)
chr5 (164-208)||(17046329-17046373)
chr5 (164-212)||(20370152-20370200)
chr5 (158-202)||(26655465-26655509)
chr5 (158-202)||(26927050-26927094)
chr5 (158-210)||(27651546-27651598)
chr5 (164-200)||(42505875-42505911)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-70)||(161841-161910)
[»] scaffold0295 (1 HSPs)
scaffold0295 (8-74)||(13717-13783)
[»] scaffold0350 (1 HSPs)
scaffold0350 (158-203)||(1248-1293)
[»] scaffold0009 (1 HSPs)
scaffold0009 (158-203)||(17725-17770)
[»] scaffold0118 (1 HSPs)
scaffold0118 (164-203)||(39998-40037)
[»] scaffold0017 (1 HSPs)
scaffold0017 (159-209)||(35945-35995)
[»] scaffold0007 (1 HSPs)
scaffold0007 (169-203)||(244479-244513)
[»] scaffold0077 (1 HSPs)
scaffold0077 (165-210)||(9515-9560)
[»] scaffold0045 (2 HSPs)
scaffold0045 (169-210)||(63467-63508)
scaffold0045 (169-210)||(70799-70840)
[»] scaffold0026 (1 HSPs)
scaffold0026 (164-209)||(75319-75364)
[»] scaffold0257 (1 HSPs)
scaffold0257 (46-74)||(23885-23913)


Alignment Details
Target: scaffold0022 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 100720 - 100647
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  100720 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggagggagta 100647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32672005 - 32672080
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32672005 attaacgatcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggaaggagtatt 32672080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18668761 - 18668685
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  18668761 attaacggtcaaaattgtgcattggcatatatgaagtggttgacttggacatgtattttgaaacggagggagtatta 18668685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24624014 - 24623940
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  24624014 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtat 24623940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20226371 - 20226298
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  20226371 attaacggtaaaaattgtgcattggcatatgtgaagtggttgactttgacatgtattttgaaacggagggagta 20226298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21540702 - 21540629
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || ||||||    
T  21540702 attaacggtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaacagaaggagta 21540629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22054961 - 22055034
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  22054961 attaacggtcaaaattatgcattggcatatgtgaagtgattgacttggacatgtattttgaaacggagggagta 22055034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22120355 - 22120282
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  22120355 attaacggtaaaaattgtgcattggcatatgtgaagtggttgactttgacatgtattttgaaacggagggagta 22120282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12226164 - 12226240
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  12226164 attaacgatcaaaattgtgtattggcatgtgtgaagtggttgacttggacatgtattttaaaacggatggagtatta 12226240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19088031 - 19087957
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  19088031 attaacagtcaaaattatgcattggcatatgtgaagcggttgacttggacatgtattttgaaacggagggagtat 19087957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20437090 - 20437016
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  20437090 attaacggttaaaattatgcattgacatatgtgaagtggttgacttggacatgtattttgaaacggagggagtat 20437016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17213865 - 17213790
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||| ||| ||||||||||||| |||||||||||    
T  17213865 attaacggttaaaattgtgcattggcatatgtgaaatggttgacttagacgtgtattttgaaacagatggagtatt 17213790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32414752 - 32414686
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  32414752 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaacgga 32414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1041013 - 1041086
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||  ||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  1041013 attaacggttgaaattgtgcattgacatatgtaaagtggttgacttggacgtgtattttgaaacggatggagta 1041086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 4148128 - 4148183
Alignment:
Q  9 tcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 64  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  4148128 tcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 4148183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6563415 - 6563489
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||| | |||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||    
T  6563415 attaacagtcaaaaatatgcattggcatatgtgaagtggttgacttagacatatattttgaaacggagggagtat 6563489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 24955462 - 24955396
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||||| |||| ||||||    
T  24955462 gtcaaaattgtgcattgatatatgtgaaattgttgacttggacatgtattttgaagcggagggagta 24955396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17257724 - 17257651
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||||  |||||||||| ||||||| |||||||||||| |||||||||||||| ||||||||    
T  17257724 attaacagtcaaaattgaacattggcatacgtgaagtggttgacttggacttgtattttgaaacgaatggagta 17257651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 24623333 - 24623380
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||||    
T  24623333 ccttacatatattatgcattgtccatatcaactgagctaaactcacaa 24623380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2360179 - 2360253
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||||||||||| ||||| |||| ||| |||| ||| |||||||  |||||||||||||||||  |||||||||    
T  2360179 attaacggtcaaagttgtgtattgtcatgtgtgtagtggttgactgtgacatgtattttgaaacaaatggagtat 2360253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10520657 - 10520707
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggaca 51  Q
    |||||||||| ||||||||||||||||||||  |||| |||||||||||||    
T  10520657 attaacggtccaaattgtgcattggcatatggaaagtggttgacttggaca 10520707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3989338 - 3989266
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||| ||||||||||  |||| ||||| ||||||  |||| |||||||||||||||||||| |||||||||    
T  3989338 attaacgatcaaaattgtt-attgacatatatgaagtgattgatttggacatgtattttgaaacagatggagta 3989266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 12204414 - 12204369
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  12204414 ccttacatatattatgcattgtccatatcaactgagctatgctcac 12204369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 20720797 - 20720842
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  20720797 ccttacatatattatgcattgtccataacaactgagctaagctcac 20720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 32053827 - 32053779
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    |||||||||||||| |||||| |||||||||||||||||| || |||||    
T  32053827 atatattatgcattgtccataccaactgagctaagctcacgaggacatt 32053779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 655771 - 655818
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    |||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  655771 atatattatgcattgtcgataccaactgagctaagctcacaaggacat 655818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 18256922 - 18256883
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  18256922 atatattatgcattgtccttatcaactgagctaagctcac 18256883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 20744177 - 20744138
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  20744177 atatattatgcattgtccataccaactgagctaagctcac 20744138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 24827097 - 24827050
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    ||||| |||| ||||||||| |||||||||||||||||||||| ||||    
T  24827097 ccttatatattttatgcattgtccatatcaactgagctaagctaacaa 24827050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 29069522 - 29069483
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  29069522 atatattatgcattgtccctatcaactgagctaagctcac 29069483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 4147960 - 4147926
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||||||| |||||||||||    
T  4147960 ttggacatgtattttgaaacggagggagtattatt 4147926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 24212561 - 24212599
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctca 202  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  24212561 atatattatgcattgtccatatcaactgagttaagctca 24212599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 32671845 - 32671811
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||||||| |||||||||||    
T  32671845 ttggacatgtattttgaaacggagggagtattatt 32671811  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 361793 - 361752
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||||| |||||||| |||||||||||    
T  361793 atatattatgcattgtccataccaactgagttaagctcacaa 361752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 10902379 - 10902342
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctc 201  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  10902379 atatattatgcattgtccatatcatctgagctaagctc 10902342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 2692254 - 2692214
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||||||||||||||| ||| ||||||    
T  2692254 atatattatgcattgtccatatcaactgagataatctcaca 2692214  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 26522511 - 26522471
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  26522511 atatattatgcattgtccttaccaactgagctaagctcaca 26522471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28477942 - 28477978
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagt 37  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  28477942 attaacggtcaaagttgtgcattgacatatgtgaagt 28477978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29790395 - 29790431
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagt 37  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  29790395 attaacggtcaaagttgtgcattgacatatgtgaagt 29790431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 32414912 - 32414944
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||| |||||||||    
T  32414912 ttggacatgtattttgaaacggagggagtatta 32414944  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 32420753 - 32420785
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||| |||||||||    
T  32420753 ttggacatgtattttgaaacggagggagtatta 32420785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 33938701 - 33938745
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    |||||||||||||| | |||| |||||||||||||||||| ||||    
T  33938701 atatattatgcattgttcataccaactgagctaagctcacgagaa 33938745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36399287 - 36399362
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36399287 attaacgatcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggagggagtatt 36399362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40977561 - 40977481
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattattgt 81  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  40977561 attaacagtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaacggatggagtatttttgt 40977481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9342718 - 9342644
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  9342718 attaacggtcaaaattgtgcattggcatatgtgaagtggttgacttgaacatatattttgaaacggatggagtat 9342644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52024215 - 52024288
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52024215 attaacgatcaaaattgtgcattggtatatgtgaagttgttgacttggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25171342 - 25171417
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||    
T  25171342 attaacggtcaaaattgtgtattggcatatgtgaaggggttgactttgacatgtattttgaaacggatggagtatt 25171417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11641140 - 11641066
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  11641140 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtat 11641066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36757559 - 36757485
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  36757559 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtat 36757485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40771845 - 40771771
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  40771845 attaacggtcaaaattgagcattgccatatgtgaagtggttgacttggacatgtattttgaaacggagggagtat 40771771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17306143 - 17306218
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  17306143 attaacagtcaaaattatgcattggcatatgtgaagtagttgacttggacatgtattttgaaacggaggaagtatt 17306218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30701907 - 30701980
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  30701907 attaacgatcaaaattgtgcattgacatatgtgaatttgttgacttggacatgtattttaaaacggagggagta 30701980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6766558 - 6766634
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||| ||||||||| |||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  6766558 attaactgtcaaaattatgcattagcatatgtgaagtggttgacttaaacatgtattttgaaacggatggagtatta 6766634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6402483 - 6402420
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 64  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  6402483 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 6402420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 15912407 - 15912345
Alignment:
Q  5 acggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15912407 acggttaaaattgtgcattggcatatgtgaagtggttgacttggacatgcattttgaaacgga 15912345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42367369 - 42367303
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||||||||    
T  42367369 attaacggtcaaaattgtgcattagcatatgtgaagtgattgacttggatatgtattttgaaacgga 42367303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16120512 - 16120439
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| | |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  16120512 attaacaggcaaagttgtgcattggcatatgtgaagtggttgacttgaacatgtattttgaaacggagggagta 16120439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30003723 - 30003796
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||| ||||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  30003723 attaacggtcaaaattgtacattgacatatgtgaagtgattgactttgacatgtattttgaaacggagggagta 30003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27292829 - 27292893
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  27292829 attaacggtcaaaattatgcattagcatatgtgaagtggttgactttgacatgtattttgaaacg 27292893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42735238 - 42735165
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||| ||||||||| |||| |||  |||||||||||||||||||||||| ||| ||||||    
T  42735238 attaacggtcaaaattgtacattggcatgtgtgtagtgattgacttggacatgtattttgaaatggagggagta 42735165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42788616 - 42788543
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||| ||| ||| ||||||    
T  42788616 attaacggtcaaaattgtgcattgacatatgtgaagtagttgtcttgaacatgtattttaaaatggagggagta 42788543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22575660 - 22575584
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    ||||| ||||||||||||| |||||||||||||   | |||||||  |||||||||||||||||| |||||||||||    
T  22575660 attaatggtcaaaattgtgtattggcatatgtgtgatggttgactgcgacatgtattttgaaacgaatggagtatta 22575584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48375192 - 48375269
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| |||||||||||| ||||| || |||||||| ||| |||| ||||||||||||||||||||| ||||| ||||    
T  48375192 attaacagtcaaaattgtg-attgggatgtgtgaagtggttcacttagacatgtattttgaaacggattgagtaatatt 48375269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 10841945 - 10841896
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaaga 207  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  10841945 ccttatatatattatgcattgtccatatcaactgagttaagctcacaaga 10841896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4302304 - 4302350
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttg 47  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||    
T  4302304 attaacgattaaaattgtgcattggcatatgtgaagtagttgacttg 4302350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 8253778 - 8253737
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  8253778 atatattatgcattgtccataccaactgagctaagctcacaa 8253737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 13794530 - 13794569
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  13794530 atatattatgcattatccttatcaactgagctaagctcac 13794569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 15602191 - 15602238
Alignment:
Q  156 atccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||| |||||||||||||| |||||| ||||||||||| ||||||    
T  15602191 atccttacatatattatgcattgtccataccaactgagctatgctcac 15602238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 16967216 - 16967255
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  16967216 atatattatgcattgtccatatcaactaagctaagctcac 16967255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 17917154 - 17917201
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    ||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  17917154 ccttacatattttatgcattgtccatatcaactgagctaaactcacaa 17917201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 23953169 - 23953215
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  23953169 atatattatgcatt-tccatatcaactgagctaaactcacaaggacat 23953215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 26755655 - 26755616
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  26755655 atatataatgcattgtccatatcaactgagctaagctcac 26755616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 27449467 - 27449506
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  27449467 atatattatgcattgtccatattaactgagctaagctcac 27449506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 42045394 - 42045433
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  42045394 atatattatgcattgtccataccaactgagctaagctcac 42045433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 44641566 - 44641527
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  44641566 atatattatgcattgtccatatcaactgagctaaactcac 44641527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 45140028 - 45140067
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  45140028 atatattatgcattgtccataccaactgagctaagctcac 45140067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 3777757 - 3777711
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    ||||||||| |||| ||||||||||||||| ||||||||| ||||||    
T  3777757 atatattatacattatccatatcaactgagttaagctcacgagaaca 3777711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 25086522 - 25086480
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  25086522 atattttatgcattgtccataccaactgagctaagctcacaag 25086480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 28832193 - 28832239
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||||||||||||| | |||| |||||||| ||||||||||||||||    
T  28832193 atatattatgcattgttcataccaactgagttaagctcacaagaaca 28832239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 75
Target Start/End: Complemental strand, 30003562 - 30003532
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtat 75  Q
    |||||||||||||||||||||||||||||||    
T  30003562 ttggacatgtattttgaaacggatggagtat 30003532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 32944775 - 32944733
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| ||||| |||||||||||||||    
T  32944775 atatattatgcattgtccataccaactaagctaagctcacaag 32944733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 41926867 - 41926821
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcaca 204  Q
    ||||| |||||||||||||| ||| || |||||||||||||||||||    
T  41926867 ccttacatatattatgcattgtccttaccaactgagctaagctcaca 41926821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 48100761 - 48100719
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  48100761 atattttatgcattgtccataccaactgagctaagctcacaag 48100719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 2613767 - 2613722
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||| ||||||||| |||||| ||||||||||||||||||    
T  2613767 ccttacatattttatgcattgtccataccaactgagctaagctcac 2613722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 3393590 - 3393631
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| | ||||||||||||||||| |||||||    
T  3393590 atatattatgcattgttcatatcaactgagctaaactcacaa 3393631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 3509963 - 3510008
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||||||||||||| |||||| ||||||||||||| |||| |||||    
T  3509963 atatattatgcattgtccataccaactgagctaagttcacgagaac 3510008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 3693812 - 3693857
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| ||||||||||| || || ||||||||||||||||||||||    
T  3693812 ccttacatatattatgctttgtctatatcaactgagctaagctcac 3693857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 10292981 - 10292936
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||| ||||||||||| |||||||||    
T  10292981 ccttacatatattatgcattgtccctatcaactgagttaagctcac 10292936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 15382841 - 15382886
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    ||||||||| |||| | ||||||||||||| |||||||||||||||    
T  15382841 atatattatacattgttcatatcaactgagttaagctcacaagaac 15382886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 17139533 - 17139578
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| ||||||||||||||| ||| || ||||||||||||||||||    
T  17139533 ccttgaatatattatgcattgtccctaccaactgagctaagctcac 17139578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 17396753 - 17396708
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| ||||||||||||||| ||| | |||||||||||||||||||    
T  17396753 ccttgaatatattatgcattgtccttgtcaactgagctaagctcac 17396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 21965919 - 21965956
Alignment:
Q  169 ttatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  21965919 ttatgcattattcatatcaactgagctaagctcacaag 21965956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 29451007 - 29451052
Alignment:
Q  167 tattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    ||||||||||| |||||| |||||||| ||||||||| ||||||||    
T  29451007 tattatgcattgtccataccaactgagttaagctcacgagaacatt 29451052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 34485922 - 34485877
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||  ||||||||||||||||||||    
T  34485922 ccttacatatattatgcattatccccatcaactgagctaagctcac 34485877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 34521212 - 34521253
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||||| |||||||||||| |||||||    
T  34521212 atatattatgcattgtccataccaactgagctaaactcacaa 34521253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 36399127 - 36399098
Alignment:
Q  45 ttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||    
T  36399127 ttggacatgtattttgaaacggatggagta 36399098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 39252273 - 39252318
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||| ||| || ||||||||||||||||||||||    
T  39252273 ccttacatatattatgtattgtcgatatcaactgagctaagctcac 39252318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 41959822 - 41959855
Alignment:
Q  46 tggacatgtattttgaaacggatggagtattatt 79  Q
    |||||||||||||||||||||| |||||||||||    
T  41959822 tggacatgtattttgaaacggagggagtattatt 41959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 47038099 - 47038132
Alignment:
Q  46 tggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||||||||||||| ||||    
T  47038099 tggacatgtattttgaaacggatggagtagtatt 47038132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 49868050 - 49868009
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| ||||||||||||||| ||| |||||||    
T  49868050 atatattatgcattatccatatcaactgagttaaactcacaa 49868009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 51127906 - 51127951
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||||||| ||||||||||| |||||    
T  51127906 ccttatatatattatgcattgtccatattaactgagctaaactcac 51127951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 4770644 - 4770692
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||| |||||| ||||||| | ||||||||||||| ||||||||||||    
T  4770644 ccttatatatatcatgcattgttcatatcaactgagttaagctcacaag 4770692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 5552992 - 5553070
Alignment:
Q  136 gtggtggcggggttcgaa---ccatccttaaatatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    ||||||||||||||||||   ||  ||||| ||||||||| |||| | ||||||||||||| ||||| |||||| ||||    
T  5552992 gtggtggcggggttcgaattcccgaccttacatatattatacattgttcatatcaactgagttaagcccacaaggacat 5553070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 6402643 - 6402675
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||| |||||||||    
T  6402643 ttggacatgtattttgaaacggagggagtatta 6402675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 74
Target Start/End: Original strand, 13985016 - 13985044
Alignment:
Q  46 tggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||||||||    
T  13985016 tggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 17188684 - 17188728
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||| ||||||||| |||||| |||||||||||||||||    
T  17188684 ccttacatattttatgcattgtccataccaactgagctaagctca 17188728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 24752673 - 24752709
Alignment:
Q  167 tattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  24752673 tattatgcattgtccataccaactgagctaagctcac 24752709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 29701337 - 29701381
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| |||||||||||||| |||||||||||| || |||||||||    
T  29701337 cttacatatattatgcattgtccatatcaactaagttaagctcac 29701381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 33153896 - 33153944
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||| |||||||||||||| ||| || |||||||| ||||||||||||    
T  33153896 ccttacatatattatgcattgtccctaccaactgagttaagctcacaag 33153944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 34808585 - 34808625
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  34808585 atatattatgcattgtccttaacaactgagctaagctcaca 34808625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38153350 - 38153274
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||| |||||||||  |||||||||| |  ||||||  || ||| ||||||||||||||  |||||||    
T  38153350 attaacggtcaaagttgtgcatttacatatgtgaactgattgactgcgatatgcattttgaaacggataaagtatta 38153274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 67843 - 67765
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  67843 attaacggtcaaaattgtgcattggcatatgtgaagtggttgacttagacatgtattttgaaacggatggagtaatatt 67765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32431431 - 32431357
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  32431431 attaacggtcaaaattgtgcattggcatatgtaaagtggttgacttggacatgtattttgaaacggatggagtat 32431357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16778694 - 16778760
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16778694 attaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaacgga 16778760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 28061588 - 28061510
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  28061588 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtattatt 28061510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47156216 - 47156293
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattat 78  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  47156216 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtattat 47156293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25566621 - 25566545
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  25566621 attaacggtcaaaattgtacattggcatatgtgaaatggttgacttggacatgtattttgaaacggagggagtatta 25566545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11502653 - 11502587
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  11502653 attaacggtcaaaattgtgcattggcatatgtgaagtggttgactttgacatgtattttgaaacgga 11502587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41898177 - 41898255
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  41898177 attaacagtcaaaattatgcattggcatatgtgaagtgattgacttggacatgtattttgaaacggagggagtattatt 41898255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46103443 - 46103365
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  46103443 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtactatt 46103365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3851263 - 3851336
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  3851263 attaacggtcaaaattgtgcattggcatatgtgaagtggttgacttagacatacattttgaaacggatggagta 3851336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20885292 - 20885365
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||    
T  20885292 attaacggtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaatggagggagta 20885365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36623497 - 36623570
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  36623497 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48602625 - 48602697
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagt 73  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  48602625 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagt 48602697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39129999 - 39129933
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  39129999 attaacggtcaaaatcgtgcattggcatatgtgaagtagttgactttgacatgtattttgaaacgga 39129933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 42877578 - 42877638
Alignment:
Q  4 aacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 64  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42877578 aacggtcaaaactgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 42877638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36585851 - 36585926
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    |||||||||||||||| ||  ||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  36585851 attaacggtcaaaattatgtgttggcatatgtgaagtgcttgacttggacatgtattttgaaacgaatggagtatt 36585926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42890417 - 42890342
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||    
T  42890417 attaacagtcaaaattatgcattggcatatgtaaagtggttgacttggacatatattttgaaacggaaggagtatt 42890342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46321225 - 46321150
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||| || ||||||||    
T  46321225 attaacggtcaaaattgtgcattagcatatgtaaagtggttgatttggacatgtattttgaaacagagggagtatt 46321150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40089991 - 40089925
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  40089991 attaacagtcaaaattatgcattggcatatgtgaaatagttgacttggacatgtattttgaaacgga 40089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38851920 - 38851847
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||    
T  38851920 attaacagtcaaaattatgcattggcatatgtaaagtggttgacttggacatgtattttgaaacgcagggagta 38851847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40256245 - 40256309
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||||||    
T  40256245 attaacggtcaaaattgtgcatttgcatgtgtgaagtagttgacttgaacatgtattttgaaacg 40256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6175015 - 6175077
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaa 63  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||||    
T  6175015 attaacggtcaaaattgtgcattgacatatgtgaagtagttgacttgaatatgtattttgaaa 6175077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7439092 - 7439163
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggag 72  Q
    |||||| |||||||||||||||||| |||||||||||  ||||| |||||||||||||| ||||||| ||||    
T  7439092 attaactgtcaaaattgtgcattggtatatgtgaagtgattgacctggacatgtattttaaaacggaaggag 7439163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5788450 - 5788372
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| ||||||||||| |||| |||||||| || | ||||| ||||||||||||||||||| ||| |||||||||||    
T  5788450 attaacagtcaaaattgtacattagcatatgtaaaatggttgatttggacatgtattttgaaatggaaggagtattatt 5788372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 30342262 - 30342340
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||| |||||||| ||||| ||| |||||||| ||||| ||||||||||||||||||||| |  ||||||||||    
T  30342262 attaacggttaaaattgtacattgacatgtgtgaagtggttgatttggacatgtattttgaaacgaaaagagtattatt 30342340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 42043082 - 42043129
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  42043082 ccttaaatatattatgcattgtccataccaactgagctaagctcacaa 42043129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23707496 - 23707418
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||||| ||| ||||||| |||| || ||| |||||||    
T  23707496 attaacagtcaaaattatgcattgacatatgtgaagtggttgacttgaacaagtattttaaaacagagggaatattatt 23707418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44732201 - 44732270
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatgga 71  Q
    |||||||||||||||||| |||||  || ||||||||  |||||||||||||||| |||||||||||||||    
T  44732201 attaacggtcaaaattgtacattgatatgtgtgaagtgattgacttggacatgta-tttgaaacggatgga 44732270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 35142171 - 35142210
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  35142171 atatattatgcattgtccatatcaactgagctaagctcac 35142210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 43346581 - 43346632
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||||||    
T  43346581 cttacatatattatgcattgtccataccaactgagctaagttcacaagaaca 43346632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21379933 - 21380011
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| || |||||| | ||||| |||||||||||| ||||| || ||| |||||||| |||||||||||||| ||||    
T  21379933 attaacagttaaaattatacattgacatatgtgaagtggttgatttagacgtgtattttcaaacggatggagtagtatt 21380011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36516028 - 36516102
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||| ||||||| ||||| |||||||| || ||||| |||||||  ||||||||||| |||||||| |||||||    
T  36516028 attaatggtcaaagttgtgtattggcatgtgcgaagtggttgactctgacatgtatttagaaacggagggagtat 36516102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 41950790 - 41950840
Alignment:
Q  14 attgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 64  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||    
T  41950790 attgtgcattgacatatgtgaagtagttgacttggatatgtattttcaaac 41950840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 5526769 - 5526725
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||    
T  5526769 cttatatatattatgcattgtccataccaactgagctaagctcac 5526725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7169312 - 7169376
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    ||||||| |||||||||||||||| ||||| |||| | |||||||  ||||| ||||||||||||    
T  7169312 attaacgatcaaaattgtgcattgacatatatgaaatagttgactgtgacatatattttgaaacg 7169376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 21105642 - 21105602
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  21105642 atatattatgcattttccataccaactgagctaagctcaca 21105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 21597724 - 21597680
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||    
T  21597724 cttacatatattatgcattgtccatatcaactgagataagctcac 21597680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 26825414 - 26825458
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||    
T  26825414 cttaaatatattatgcattgtccatatcaattgaggtaagctcac 26825458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 43539120 - 43539168
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||| |||||||||||||| | | ||||||||||||||||||||||||    
T  43539120 ccttacatatattatgcattgttcctatcaactgagctaagctcacaag 43539168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 48069853 - 48069905
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    ||||| |||||||||||||| | ||| ||||||||||||||||||| ||||||    
T  48069853 ccttacatatattatgcattgttcatgtcaactgagctaagctcacgagaaca 48069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 5317310 - 5317349
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  5317310 atatattatgcattttccatatcaactgagttaagctcac 5317349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 10244766 - 10244727
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  10244766 atatattatgcattgtccataccaactgagctaagctcac 10244727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 39801745 - 39801706
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  39801745 atatattatgcattgtccataccaactgagctaagctcac 39801706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 39926560 - 39926599
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  39926560 atatattatgcattgtccttatcaactgagctaagctcac 39926599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 48980526 - 48980487
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  48980526 atatattatgcattgtccataccaactgagctaagctcac 48980487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 429200 - 429246
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||||||||| ||| ||||||||||||||| ||||||||| ||||||    
T  429200 atatattatgtattatccatatcaactgagttaagctcacgagaaca 429246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 3672574 - 3672616
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||    
T  3672574 atatattatgtattgtccatatcaactgagctaaactcacaag 3672616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 22991413 - 22991455
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| |||||||| ||||||||||||    
T  22991413 atatattatgcattgtccataccaactgagttaagctcacaag 22991455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 38842026 - 38841988
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctca 202  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  38842026 atatattatgcattgtccataccaactgagctaagctca 38841988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 7457810 - 7457745
Alignment:
Q  9 tcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||| |||  |||||||||||| ||||| ||| | |||||||||||||  |||||||||    
T  7457810 tcaaaattgtgtattaacatatgtgaagtggttgaattgaatatgtattttgaaatagatggagta 7457745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 8615062 - 8615021
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  8615062 atatattatgcattgtccttaccaactgagctaagctcacaa 8615021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 21164774 - 21164819
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||    
T  21164774 ccttatatatattatgcattatccataccaactgagttaagctcac 21164819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 34000307 - 34000262
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||| ||||||||||| |||||||||    
T  34000307 ccttacatatattatgcattatccttatcaactgagttaagctcac 34000262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 37451253 - 37451298
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  37451253 ccttacatatattatgcattatccttatcaactgagctaaactcac 37451298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 40303264 - 40303309
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||||||||||||| || ||||||||| ||||||| ||||||||||    
T  40303264 atatattatgcattgtcgatatcaactaagctaagttcacaagaac 40303309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 74
Target Start/End: Original strand, 42890576 - 42890605
Alignment:
Q  45 ttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||    
T  42890576 ttggacatgtattttgaaacggatggagta 42890605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 5458093 - 5458137
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    |||||||||||||| | | ||||||||||||||||||||| ||||    
T  5458093 atatattatgcattgttcttatcaactgagctaagctcacgagaa 5458137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 16778534 - 16778502
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||| |||||||||    
T  16778534 ttggacatgtattttgaaacggagggagtatta 16778502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 20243291 - 20243255
Alignment:
Q  167 tattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  20243291 tattatgcattgtccataccaactgagctaagctcac 20243255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 21050244 - 21050288
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    |||||||||||||| ||| || |||||||||||||||||| ||||    
T  21050244 atatattatgcattgtccttaccaactgagctaagctcactagaa 21050288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 24657015 - 24656971
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||| ||||||||| |||||| |||||||||||||||||    
T  24657015 ccttacatattttatgcattatccataccaactgagctaagctca 24656971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 24991820 - 24991780
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  24991820 atatattatgcattgtccttaccaactgagctaagctcaca 24991780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 27068179 - 27068227
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    ||||| |||||||| |||||| ||||||||||||||| || ||||||||    
T  27068179 atataatatgcattatccataccaactgagctaagcttacgagaacatt 27068227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 27210134 - 27210086
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    ||||| |||||||| |||||| ||||||||||||||| || ||||||||    
T  27210134 atataatatgcattatccataccaactgagctaagcttacgagaacatt 27210086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 31038550 - 31038594
Alignment:
Q  170 tatgcattctccatatcaactgagctaagctcacaagaacattga 214  Q
    |||||||| |||||| |||||||||||||||||| || |||||||    
T  31038550 tatgcattgtccataccaactgagctaagctcacgaggacattga 31038594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19433431 - 19433353
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  19433431 attaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtaatatt 19433353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35686596 - 35686669
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  35686596 attaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgcattttgaaacggagggagta 35686669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26170176 - 26170252
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  26170176 attaacggtcaaaattgagcattgtcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtatta 26170252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 47386359 - 47386285
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  47386359 attaacggtcaaaattatacattggcatgtgtgaagtagttgacttggacatgtattttgaaacggatggagtat 47386285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17446706 - 17446641
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgg 66  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  17446706 attaacggtcaaaattgtgcattgacatatgtgaagtagttgacttggacatgtattttgaaacgg 17446641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38416723 - 38416650
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  38416723 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43967912 - 43967985
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  43967912 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaacggatggagta 43967985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45292021 - 45292094
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  45292021 attaacagtcaaaattatgcattggcatatgtgaagtagttgacttggacatgtattttgaaacggagggagta 45292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12625440 - 12625516
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||    
T  12625440 attaacggtcaaaattgtgcattagcatatgtggagtggttgacttgaacatgtattttgaaacggagggagtatta 12625516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 17610472 - 17610542
Alignment:
Q  4 aacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| ||||||    
T  17610472 aacggtcaaaattgtgcattggcatatgtgaagtggttgacttgaacatatattttgaaacggagggagta 17610542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2760803 - 2760730
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  2760803 attaacagtcaaaattatgcattgacatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 2760730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4467593 - 4467520
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||    
T  4467593 attaacggtcaaaatcgtgcattggcatgtttgaagtggttgacttggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38721526 - 38721599
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||    
T  38721526 attaacgatcaaaattgtgcattggcatatgtgaagtggttgacttgaacatgtcttttgaaacggaaggagta 38721599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44232150 - 44232077
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  44232150 attaacagtcaaaattatgcattgtcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 55209647 - 55209574
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  55209647 attaacagtcaaaattatgcattggcatatgtaaagtggttgacttggacatgtattttgaaacggagggagta 55209574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25296652 - 25296579
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||  ||||||||||||||||||| ||||||    
T  25296652 attaacggtcaaaattgtgcattgacatgtgtgaagtggttgacttatacatgtattttgaaacggagggagta 25296579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35380967 - 35380892
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    |||||| ||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  35380967 attaacagtcaaaattatatattggcatatgtgaagtggttgacttggacatgtattttgaaacggaggaagtatt 35380892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 54330763 - 54330688
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||||| |||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||| | ||||||    
T  54330763 attaacggttaaaattgtgcattgacatatgtgaagtgattgacttggacatctattttgaaacggaggaagtatt 54330688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9029522 - 9029448
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||  ||||||||||| ||||||| |||||||    
T  9029522 attaacgatcaaaattgtgcattggcatatgtgaagtgattgacttaaacatgtattttaaaacggagggagtat 9029448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 55192013 - 55192091
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||| |||||||||||||||||  | || |||||||| ||||||||||||||  ||||||||||    
T  55192013 attaacggtcaaaattgtggattggcatatgtgaagtgatcgatttggacatatattttgaaacggagtgagtattatt 55192091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 55800988 - 55801061
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| ||||| | |||| |||||||| ||||||||||||||||| |||| ||||    
T  55800988 attaacggtcaaaattgtgcattgacatatataaagtggttgactttgacatgtattttgaaacagatgaagta 55801061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12240250 - 12240186
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||    
T  12240250 attaatggtcaaaattgtgtattggcatatgtgaagtggttgactttgacatatattttgaaacg 12240186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 26125905 - 26125963
Alignment:
Q  9 tcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    |||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||    
T  26125905 tcaaaattgtgcattgccatatgtgaagtgattgacttgaacatgtattttgaaacgga 26125963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 29830540 - 29830606
Alignment:
Q  9 tcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||||| ||||||| |||||||||||| ||| |||| |||||||||||||||||||| |||||||    
T  29830540 tcaaaattatgcattgacatatgtgaagtggttcacttagacatgtattttgaaacggagggagtat 29830606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50620559 - 50620493
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||| ||||| |||||| |||||||    
T  50620559 attaacggttaaaattgtgcattgacatatgtgaagtggttgacttagacatctattttaaaacgga 50620493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 16743306 - 16743353
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  16743306 atatattatgcattatccatatcaactgagctaagctcacaaggacat 16743353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 20383527 - 20383477
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacattga 214  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  20383527 atatattatgcattgtccataccaactgagctaagctcacatgaacattga 20383477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25918392 - 25918456
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggat 68  Q
    |||||||||||||||||| ||||| ||||||||||   ||||||||  ||||||||||||||||||||    
T  25918392 attaacggtcaaaattgtacattgacatatgtgaa---gttgacttaaacatgtattttgaaacggat 25918456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 24665013 - 24665052
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  24665013 atatattatgcattctccataccaactgagctaagctcac 24665052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 6459940 - 6459990
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||| ||||    
T  6459940 ccttacatatattatgcattgtccatatcaactgagttaagctcacgagaa 6459990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 19854604 - 19854562
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  19854604 atatattatgcattgtccataccaactgagctaagctcacaag 19854562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 2034111 - 2034156
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||    
T  2034111 ccttaaatatattatgcattatccataccaactgagctaaactcac 2034156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 11198809 - 11198764
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||    
T  11198809 ccttacatattttatgcattctccataccaactgagctaagctcac 11198764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 7282602 - 7282550
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||| ||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  7282602 cctttaatatattatgcattgttcataccaactgagctaagttcacaagaaca 7282550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 52270052 - 52270100
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    |||||||||||||| |||||| |||||||||||||||||| || |||||    
T  52270052 atatattatgcattgtccataccaactgagctaagctcacgaggacatt 52270100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 2186355 - 2186394
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  2186355 atatattatgcattgtccataccaactgagctaagctcac 2186394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 12698636 - 12698597
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  12698636 atatattatgcattgtccaaatcaactgagctaagctcac 12698597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 23160085 - 23160034
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    ||||| |||||||||||||| ||| || ||||||||||| ||||||||||||    
T  23160085 ccttacatatattatgcattgtccctaccaactgagctacgctcacaagaac 23160034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 28435270 - 28435317
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||    
T  28435270 atatattatgcattgtccataccaactgagctaaactcacaaggacat 28435317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30446490 - 30446565
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||| ||||| || |||||||||||||||||| | ||||||    ||||||||||||||||| | ||||||||    
T  30446490 attaacgatcaaagttatgcattggcatatgtgaaatggttgacagcaacatgtattttgaaacgaagggagtatt 30446565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 35998035 - 35997996
Alignment:
Q  167 tattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  35998035 tattatgcattgtccatatcaactgagctaaactcacaag 35997996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 36203275 - 36203236
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  36203275 atatattatgcattgtccttatcaactgagctaagctcac 36203236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 39171392 - 39171431
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  39171392 atattttatgcattgtccatatcaactgagctaagctcac 39171431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 43155118 - 43155079
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  43155118 atatattatgcattatccataacaactgagctaagctcac 43155079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 43374294 - 43374333
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  43374294 atattttatgcattgtccatatcaactgagctaagctcac 43374333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 2580777 - 2580731
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||| |||||||| ||||| |||||| ||||||||||||||||||||    
T  2580777 cttatatatattacgcattgtccataccaactgagctaagctcacaa 2580731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4455482 - 4455556
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||| ||||||| ||||| ||| |||| | || ||| |||||||  |||||||||||||||||||| |||||||    
T  4455482 attaatggtcaaagttgtgtattagcatgtctgcagtggttgactgcgacatgtattttgaaacggaaggagtat 4455556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 6087786 - 6087744
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| || ||| |||||||||||||||||||||    
T  6087786 atatattatgcattatctataccaactgagctaagctcacaag 6087744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 10204885 - 10204843
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagct 200  Q
    ||||| |||||||||||||| |||||| |||||||||||||||    
T  10204885 ccttacatatattatgcattgtccataccaactgagctaagct 10204843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 11949785 - 11949823
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctca 202  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  11949785 atatattatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 19479499 - 19479541
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| | ||||| ||||||||||||||||||||    
T  19479499 atatattatgcattgttcatattaactgagctaagctcacaag 19479541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 22040689 - 22040647
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  22040689 atatattatgcattgtccatatcaactgagctaaactcgcaag 22040647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 24479337 - 24479375
Alignment:
Q  167 tattatgcattctccatatcaactgagctaagctcacaa 205  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  24479337 tattatgcattgtccataccaactgagctaagctcacaa 24479375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 24706496 - 24706526
Alignment:
Q  46 tggacatgtattttgaaacggatggagtatt 76  Q
    |||||||||||||||||||||||||||||||    
T  24706496 tggacatgtattttgaaacggatggagtatt 24706526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 30135179 - 30135137
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||    
T  30135179 atatattatgcattatccttatcaactgagttaagctcacaag 30135137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 54500614 - 54500560
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    ||||| |||||||||||||| ||  || |||||||||||||||||| ||||||||    
T  54500614 ccttacatatattatgcattgtctctaccaactgagctaagctcacgagaacatt 54500560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 2587716 - 2587761
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||| ||| ||||||||||||||    
T  2587716 ccttacatatattatgcattatccataccaattgagctaagctcac 2587761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 14202495 - 14202540
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||| |||||||||| |||||||||    
T  14202495 ccttacatatattatgcattatccaaatcaactgagttaagctcac 14202540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 38297981 - 38297940
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||||||||| |||| |||||||||||    
T  38297981 atatattatgcattgtccatatcaattgaggtaagctcacaa 38297940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 38416096 - 38416055
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  38416096 atatattatgcattatccttaccaactgagctaagctcacaa 38416055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 54587945 - 54587900
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||||||||||||||| || ||||||    
T  54587945 ccttacatatattatgcattatccatatcaactgagttatgctcac 54587900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 2932167 - 2932123
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| |||||||||||||| ||| ||||||| |||||||||||||    
T  2932167 cttacatatattatgcattgtccctatcaacagagctaagctcac 2932123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 3037140 - 3037188
Alignment:
Q  14 attgtgcattggcatatgtgaagttgttgacttggacatgtattttgaa 62  Q
    ||||||||||||||| ||||| || |||||||  |||||||||||||||    
T  3037140 attgtgcattggcatgtgtgatgtggttgactgcgacatgtattttgaa 3037188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 3936666 - 3936626
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  3936666 atatattatgcattgttcataccaactgagctaagctcaca 3936626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 5428772 - 5428828
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 64  Q
    ||||||||||| ||||| ||| |||||||| |||||||   ||||||||||||||||    
T  5428772 gtcaaaattgtacattgacatgtgtgaagtggttgactgttacatgtattttgaaac 5428828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 21649325 - 21649273
Alignment:
Q  156 atccttaaatatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    ||||||| |||||||||||||| |||||  | |||||||||||||||| ||||    
T  21649325 atccttacatatattatgcattgtccatcccgactgagctaagctcacgagaa 21649273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 22411809 - 22411765
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||||||||||||| |||||| ||||||||||| |||||    
T  22411809 ccttacatatattatgcattgtccataccaactgagctatgctca 22411765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 36479036 - 36478992
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||||||||||||| |||||| |||| ||||||||||||    
T  36479036 ccttacatatattatgcattgtccataccaacagagctaagctca 36478992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 39146680 - 39146644
Alignment:
Q  165 tatattatgcattctccatatcaactgagctaagctc 201  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  39146680 tatattatgcattgtccatatcaactgagttaagctc 39146644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 42756128 - 42756168
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| |||||||||||||||| |||||    
T  42756128 atatattatgcattgtccttatcaactgagctaagttcaca 42756168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 50442769 - 50442809
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  50442769 atatattatgcattatccctaccaactgagctaagctcaca 50442809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 56096249 - 56096197
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    ||||| |||||||||||||| ||| ||||||||||| |||||| ||| |||||    
T  56096249 ccttacatatattatgcattgtccttatcaactgagttaagcttacatgaaca 56096197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 71151 - 71224
Alignment:
Q  3 taacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  71151 taacgatcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggatggagtatt 71224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6910523 - 6910596
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  6910523 attaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 36354454 - 36354587
Alignment:
Q  73 tattattgtttatcctggcatacaatttagatgataaaagaacacaacaaattttcnnnnnnngtggtggcggggttcgaaccatccttaaatatattat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||         | |||| |||||||||||| |||||| |||||||||    
T  36354454 tattattgtttatcctggcatacaatttagatgataaaagaacaaaacatttttt----tttttttgtggtggggttcgaaccctccttacatatattat 36354549  T
Q  173 gcattctccatatcaactgagctaagctcacaagaaca 210  Q
      ||| | ||||||||||||||||||||||||||||||    
T  36354550 atatttttcatatcaactgagctaagctcacaagaaca 36354587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21005482 - 21005556
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  21005482 attaacagtcaaaattatgcattggcatatgtgaaatggttgacttggacatgtattttgaaacggatggagtat 21005556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27010547 - 27010473
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  27010547 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtat 27010473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20765385 - 20765458
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  20765385 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28690437 - 28690510
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  28690437 attaacggtcaaaattgtgcattgacatatgtgaagtggttgacttggacatgtattttgaaaaggagggagta 28690510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42761556 - 42761483
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  42761556 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 42761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13499408 - 13499332
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  13499408 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaatggagggagtatta 13499332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38138014 - 38138077
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 64  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  38138014 attaacggtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaac 38138077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27334804 - 27334730
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  27334804 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaacggagggagtat 27334730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39866214 - 39866140
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  39866214 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaacggagggagtat 39866140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 42490262 - 42490198
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggag 72  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42490262 gtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggag 42490198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 36227735 - 36227806
Alignment:
Q  2 ttaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagt 73  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||| |||||    
T  36227735 ttaacggtcaaaattgtgcattggcatgtgtgaagtgattgacttggacatatattttgaaacggagggagt 36227806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33415988 - 33416054
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  33415988 attaacagtcaaaattgtgcattgacatatgtgaagtggttgacttggacatctattttgaaacgga 33416054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32221022 - 32221095
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||| ||||||| ||||||    
T  32221022 attaacggtcaaaattgtgcattgacatatatgaagtggttgactttgacatgtattttaaaacggagggagta 32221095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43467815 - 43467742
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| ||||| | || | |||||||| |||||||||||||||||||||||||||    
T  43467815 attaacggtcaaaattgtgcattgacatatataaaatggttgacttagacatgtattttgaaacggatggagta 43467742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42345587 - 42345664
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattat 78  Q
    |||||||||||||||||| ||| | |||||||||| | ||||||||||||||||||||||||||  | ||||||||||    
T  42345587 attaacggtcaaaattgtacatcgacatatgtgaaatggttgacttggacatgtattttgaaacaaaaggagtattat 42345664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21797745 - 21797813
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatg 69  Q
    ||||| |||||||||| ||||||  |||||||||||| |||||||| ||||||||||||||||||||||    
T  21797745 attaatggtcaaaattatgcattaacatatgtgaagtggttgacttagacatgtattttgaaacggatg 21797813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19824487 - 19824553
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||| |||||||||| ||| ||||| |||||| |||||||||||||||||||||| ||||||    
T  19824487 attaacggttaaaattgtgcgttgacatatttgaagtggttgacttggacatgtattttgtaacgga 19824553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44561973 - 44562051
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||| ||||| |||||||| |||||||| |||||||  ||||||||||||||| |||| |||||| ||||    
T  44561973 attaacggtcaaagttgtgaattggcatgtgtgaagtggttgactgcgacatgtattttgaatcggagggagtaatatt 44562051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 3612199 - 3612246
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  3612199 cttatatatattatgcattatccatatcaactgagctaagctcacaag 3612246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 34822227 - 34822280
Alignment:
Q  26 catatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  34822227 catatgtgaagtggttgacttgaacatgtattttaaaacagatggagtattatt 34822280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15332879 - 15332815
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    ||||| ||||||| ||||| |||||||| |||| ||| ||||||| |||||||||||||||||||    
T  15332879 attaatggtcaaagttgtgtattggcatgtgtgtagtggttgactgggacatgtattttgaaacg 15332815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30213992 - 30214048
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtatt 57  Q
    |||||| ||||||||| ||||| |||||||||||||| |||||||||||||| ||||    
T  30213992 attaacagtcaaaattatgcatcggcatatgtgaagtggttgacttggacatctatt 30214048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43181429 - 43181369
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttga 61  Q
    |||||||||||||||| ||||||| ||| || ||||| ||||| |||||||||||||||||    
T  43181429 attaacggtcaaaattatgcattgacatgtgagaagtggttgatttggacatgtattttga 43181369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 53996338 - 53996296
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  53996338 atatattatgcattgtccataccaactgagctaagctcacaag 53996296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 20537921 - 20537884
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctc 201  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20537921 atatattatgcattgtccatatcaactgagctaagctc 20537884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 42269343 - 42269290
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    ||||| |||||||||||||| ||||||  ||||||||||| |||||||||||||    
T  42269343 ccttacatatattatgcattgtccatactaactgagctaaactcacaagaacat 42269290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 55066622 - 55066667
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||    
T  55066622 atatattatgcattatccgtaccaactgagctaagctcacaagaac 55066667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 20370272 - 20370342
Alignment:
Q  136 gtggtggcggggttcgaaccat---ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||| ||||||||||| |   ||||  |||| ||||||||| |||||||||||||||||||||||||    
T  20370272 gtggtggctgggttcgaaccctaaaccttgcatattttatgcattgtccatatcaactgagctaagctcac 20370342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 54507830 - 54507894
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    ||||||||| |||||| | ||||  |||||||||||| ||||||||||||||| ||||| |||||    
T  54507830 attaacggtaaaaattatacattaacatatgtgaagtggttgacttggacatgcattttaaaacg 54507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 5117253 - 5117202
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    ||||| |||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  5117253 ccttacatatattatgtattgtccttatcaactgagctaagctcacgagaac 5117202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 7974534 - 7974573
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  7974534 atatattatgcattatccataccaactgagctaagctcac 7974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 10498717 - 10498756
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  10498717 atatattatgcattgtccataccaactgagctaagctcac 10498756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 20413774 - 20413813
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  20413774 atatattatgtattatccatatcaactgagctaagctcac 20413813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 21331439 - 21331478
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  21331439 atatattatgcattgtccataacaactgagctaagctcac 21331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 10617587 - 10617553
Alignment:
Q  169 ttatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||| |||||||||||||||||||||||||    
T  10617587 ttatgcattatccatatcaactgagctaagctcac 10617553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 14827564 - 14827518
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||| ||||||||| |||||| |||||||||||||||||| ||||||    
T  14827564 atattttatgcattgtccataccaactgagctaagctcacgagaaca 14827518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26406080 - 26406018
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaa 63  Q
    ||||| ||||||| ||||| ||| ||||||||| ||| |||||||  ||||||||||||||||    
T  26406080 attaatggtcaaagttgtgtattagcatatgtgcagtggttgactgcgacatgtattttgaaa 26406018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 29631225 - 29631187
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctca 202  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  29631225 atatattatgcattgtccataccaactgagctaagctca 29631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 33404267 - 33404229
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctca 202  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  33404267 atatattatgtattgtccatatcaactgagctaagctca 33404229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 38130981 - 38131023
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| |||||||| ||||||||||||    
T  38130981 atatattatgcattgtccataccaactgagttaagctcacaag 38131023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 7827553 - 7827508
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||    
T  7827553 ccttacatatattatgcattgtccatatcaactgagttaaactcac 7827508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 7829941 - 7829896
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||    
T  7829941 ccttacatatattatgcattgtccatatcaactgagttaaactcac 7829896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 9321427 - 9321468
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||| | ||||||||||||||||||||    
T  9321427 atatattatgcattgtccaaaccaactgagctaagctcacaa 9321468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 19468490 - 19468449
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||||| |||||||| |||||||||||    
T  19468490 atatattatgcattgtccataccaactgagttaagctcacaa 19468449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21083176 - 21083249
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||| ||||||| ||||| ||||| || ||||| || |||||||  ||||||||||||||||| || ||||||    
T  21083176 attaatggtcaaagttgtgtattggtatgtgtgacgtggttgactatgacatgtattttgaaacagagggagta 21083249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 21160097 - 21160052
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  21160097 ccttacatatattatgcattatccatatcaactgagttaagttcac 21160052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 24428495 - 24428532
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctc 201  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  24428495 atatattatgcattgtccataccaactgagctaagctc 24428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 25441522 - 25441563
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||||| ||||||||||||| ||||||    
T  25441522 atatattatgcattgtccataccaactgagctaagttcacaa 25441563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 46469322 - 46469277
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| ||||||||||||||| ||| || ||||||||||||||||||    
T  46469322 ccttgaatatattatgcattgtccttaccaactgagctaagctcac 46469277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 48263992 - 48264029
Alignment:
Q  169 ttatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  48263992 ttatgcattgtccctatcaactgagctaagctcacaag 48264029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 977963 - 977999
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagct 200  Q
    |||||||||||||| |||||| |||||||||||||||    
T  977963 atatattatgcattgtccataccaactgagctaagct 977999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 6000684 - 6000728
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||||||||||||| || ||||||| |||||||||||||    
T  6000684 ccttatatatattatgcattgtctatatcaattgagctaagctca 6000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 6910363 - 6910327
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtattattgt 81  Q
    ||||||||||||||||||||||  |||||||||||||    
T  6910363 ttggacatgtattttgaaacggggggagtattattgt 6910327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 15881122 - 15881082
Alignment:
Q  171 atgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    ||||||| |||||||||||| |||||||||||| |||||||    
T  15881122 atgcattgtccatatcaacttagctaagctcacgagaacat 15881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 21549077 - 21549041
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagct 200  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  21549077 atatattatacattgtccatatcaactgagctaagct 21549041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 30200865 - 30200825
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  30200865 atatattatgcattgtccttagcaactgagctaagctcaca 30200825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33803711 - 33803775
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    |||||||||||||| |||||||||  |||| | |||| ||||| |||| ||||| ||||||||||    
T  33803711 attaacggtcaaaagtgtgcattgatatatataaagtggttgatttggtcatgttttttgaaacg 33803775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 47313397 - 47313433
Alignment:
Q  167 tattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  47313397 tattatgcattgtccataccaactgagctaagctcac 47313433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 50980067 - 50980111
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||    
T  50980067 ccttatatatattatgcattatccatactaactgagctaagctca 50980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 51083201 - 51083245
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||    
T  51083201 ccttatatatattatgcattatccatactaactgagctaagctca 51083245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5405185 - 5405263
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  5405185 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtattatt 5405263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7608238 - 7608314
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  7608238 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtatta 7608314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19141139 - 19141063
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  19141139 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtatta 19141063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33607561 - 33607635
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  33607561 attaacgatcaaaattgtgcattgacatatgtgaagtagttaacttggacatgtattttgaaacggatggagtat 33607635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2183033 - 2182960
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  2183033 attaacagtcaaaattgtgcattggcatatgtgaagttgttgatttgaacatgtattttgaaacggagggagta 2182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13125218 - 13125145
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  13125218 attaacgatcaaaattgtacattggcatatgtgaagtgattgacttggacatgtattttgaaacggatggagta 13125145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44365346 - 44365419
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  44365346 attaacggtcaaaattatgcattggcatatgtgaagtgattgacttggacatgtattttgaaacggagggagta 44365419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11841666 - 11841593
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||| |||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  11841666 attaacggtcaaaattatgcattagcatatgtgaagtgattgacttggacatgtattttgaaacggagggagta 11841593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9172219 - 9172157
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaa 63  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  9172219 attaacggtcaaaattgtacattggcatgtgtgaagtggttgacttggacatgtattttgaaa 9172157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8042095 - 8042017
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||| ||||||||| | ||||| |||||||||||| |||||||||||||| |||||||||||||| |||||| ||||    
T  8042095 attaacagtcaaaattatacattgacatatgtgaagtggttgacttggacatatattttgaaacggagggagtagtatt 8042017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36072363 - 36072425
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaa 63  Q
    |||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  36072363 attaacagtcaaaattgtgcattgtcatatgtgaagtgattgacttggacatgtattttgaaa 36072425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36719397 - 36719333
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    |||||||||||||||||||||||| |||||||||||| |||||| || ||||||||||| |||||    
T  36719397 attaacggtcaaaattgtgcattgacatatgtgaagtggttgacctgaacatgtattttaaaacg 36719333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39358324 - 39358370
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttg 47  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39358324 attaacggtcaaaattgtgcattggcatatgtgaagtagttgacttg 39358370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 24093137 - 24093069
Alignment:
Q  10 caaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattat 78  Q
    |||| ||||| |||| ||| |||||||| |||||||  |||||||||||||||||||||||||||||||    
T  24093137 caaagttgtgaattgacatgtgtgaagtggttgactacgacatgtattttgaaacggatggagtattat 24093069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7800036 - 7800111
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    ||||||||||||| |||||||| ||||| |||||||| ||||||   |||||||||||||||| ||| ||||||||    
T  7800036 attaacggtcaaagttgtgcataggcatgtgtgaagtggttgacaacgacatgtattttgaaagggagggagtatt 7800111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 36177646 - 36177580
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||||  || |||||||| |||||||  |||||||||||||||||||||||||||    
T  36177646 gtcaaagttgtgcattgatatgtgtgaagtggttgactgtgacatgtattttgaaacggatggagta 36177580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32774781 - 32774845
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    ||||||||||||| ||| ||||||  |||||| || | |||||||||||||||||||||||||||    
T  32774781 attaacggtcaaagttgcgcattgatatatgtaaaatggttgacttggacatgtattttgaaacg 32774845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 9519736 - 9519783
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    |||||||||||||| |||||||||| |||||||||||||| |||||||    
T  9519736 atatattatgcattgtccatatcaattgagctaagctcacgagaacat 9519783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 10195684 - 10195723
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  10195684 atatattatgcattatccatatcaactgagctaagctcac 10195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 33064025 - 33063986
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  33064025 atatattatgcattgtccatatcaactgagctaagctcac 33063986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 29734730 - 29734688
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  29734730 atatattatgcattgtccatatcaactgagctaaactcacaag 29734688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 28202342 - 28202297
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||    
T  28202342 ccttacatatattatgcattgtccctatcaactgagctaagctcac 28202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 4238804 - 4238756
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||||||    
T  4238804 ccttacatatattatgcattgtccatactaactgagctaagctcacaag 4238756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 1861831 - 1861870
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  1861831 atatattatgcattgtccatatcagctgagctaagctcac 1861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 7262845 - 7262806
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  7262845 atatattatgcattgtccatatcaactgagctaaggtcac 7262806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 9383231 - 9383270
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  9383231 atatattatgcattgtccataccaactgagctaagctcac 9383270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 10332297 - 10332336
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  10332297 atatattatgcattgtccttatcaactgagctaagctcac 10332336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 20120743 - 20120786
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaaga 207  Q
    |||||||||||||| ||| || ||||||||||||||||||||||    
T  20120743 atatattatgcattgtccttaccaactgagctaagctcacaaga 20120786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 25186264 - 25186303
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  25186264 atatattatgcattgtccatatcaactgagctaaactcac 25186303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 27244696 - 27244657
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  27244696 atatattatgcattgtccctatcaactgagctaagctcac 27244657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 29599978 - 29599931
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    |||||||||||||| |||| | |||||||||||||||||| |||||||    
T  29599978 atatattatgcattatccaaaccaactgagctaagctcacgagaacat 29599931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 39068730 - 39068769
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  39068730 atatattatgcattgtccttatcaactgagctaagctcac 39068769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11931854 - 11931928
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||| ||||||| ||||| |||||||| | || ||| |||||||  ||||||||||||||||| |||| |||||    
T  11931854 attaatggtcaaagttgtgtattggcatgtttgcagtggttgactgcgacatgtattttgaaacagatgaagtat 11931928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 40853840 - 40853882
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||  | ||||||||||||||||||||||||||    
T  40853840 atatattatgcatatttcatatcaactgagctaagctcacaag 40853882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 44526166 - 44526128
Alignment:
Q  165 tatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  44526166 tatattatgcattgtccataccaactgagctaagctcac 44526128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 2183190 - 2183223
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtattat 78  Q
    ||||||||||||||||||||||| ||||||||||    
T  2183190 ttggacatgtattttgaaacggagggagtattat 2183223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 3196605 - 3196560
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| | |||||||||||||| ||||||||    
T  3196605 ccttacatatattatgcattgttcatatcaactgagcaaagctcac 3196560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 5028901 - 5028856
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||  ||||||||||||||||||||    
T  5028901 ccttacatatattatgcattgtcctaatcaactgagctaagctcac 5028856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 7608078 - 7608049
Alignment:
Q  45 ttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||    
T  7608078 ttggacatgtattttgaaacggatggagta 7608049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 19967455 - 19967418
Alignment:
Q  166 atattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||| | |||||||||||||||||||||||    
T  19967455 atattatgcattgttcatatcaactgagctaagctcac 19967418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 41165480 - 41165435
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||    
T  41165480 ccttatatatattatgcattatccataacaactgagttaagctcac 41165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 6765655 - 6765607
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||| |||| ||||||||| |||||| ||||||||||||||| |||||    
T  6765655 ccttacatattttatgcattgtccataccaactgagctaagcttacaag 6765607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 7302163 - 7302211
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    |||| ||||||||| ||| |||||||||||||||| |||| ||||||||    
T  7302163 atattttatgcattgtccctatcaactgagctaagttcacgagaacatt 7302211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 7350585 - 7350549
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagct 200  Q
    |||||||||||||| |||||| |||||||||||||||    
T  7350585 atatattatgcattgtccataccaactgagctaagct 7350549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 9547431 - 9547467
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagct 200  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  9547431 atatattatgcattgtccatatcaactgagttaagct 9547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 9581308 - 9581356
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    ||||||||| |||| |||||| ||||| | |||||||||||||||||||    
T  9581308 atatattattcattgtccataccaacttatctaagctcacaagaacatt 9581356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 16204839 - 16204879
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| ||||||||||| ||||||||||    
T  16204839 atatattatgcattgtccttatcaactgagttaagctcaca 16204879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 16877163 - 16877115
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    |||||||||||||| |||||| || ||||||||||||||| || |||||    
T  16877163 atatattatgcattgtccataccagctgagctaagctcacgaggacatt 16877115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 16989294 - 16989246
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    |||||||||||||| |||||| || ||||||||||||||| || |||||    
T  16989294 atatattatgcattgtccataccagctgagctaagctcacgaggacatt 16989246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 20565097 - 20565141
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    |||||||||||||| ||| || |||||||||||||||||| ||||    
T  20565097 atatattatgcattgtccctaccaactgagctaagctcacgagaa 20565141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 25598584 - 25598628
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    |||||||||||||| |||||| ||||||||||||| |||| ||||    
T  25598584 atatattatgcattgtccataccaactgagctaagttcacgagaa 25598628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 39358389 - 39358429
Alignment:
Q  34 aagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||| ||||||||||||||||||||||||| ||| ||||||    
T  39358389 aagtagttgacttggacatgtattttgaaatggagggagta 39358429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 6e-27; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14237469 - 14237542
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  14237469 attaacggtcaaaattgtgcattgacatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42587321 - 42587250
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggag 72  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42587321 attaacggtaaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggag 42587250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 623365 - 623442
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattat 78  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  623365 attaacagtcaaaattatgcattgacatatgtgaagtggttgacttggacatgtattttgaaacggagggagtattat 623442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 132206 - 132285
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattattg 80  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||| ||||    
T  132206 attaacggtcaaaattgtacattggcatgtgtgaagtagttgacttggacatgtattttaaaacggagggagtataattg 132285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 40494580 - 40494647
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  40494580 gtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtat 40494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 616972 - 617049
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtattat 78  Q
    |||||| ||||||||| ||||||| ||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  616972 attaactgtcaaaattttgcattgtcatattttaagttgttgacttggacatgtattttgaaacggagggagtattat 617049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36641931 - 36641858
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  36641931 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttagacatgtattttgaaacggagggagta 36641858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18044614 - 18044689
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgac-ttggacatgtattttgaaacggatggagtat 75  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||| |||||||    
T  18044614 attaacggtcaaaattgtgcattggcatatgtgaagtggttgactttatacatgtattttgaaacggagggagtat 18044689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24524274 - 24524349
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    |||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||||| |||||| ||||||||    
T  24524274 attaaccgtcaaaattgtgcattgacatatgtgaaatggttgacttggacatgtattttggaacggagggagtatt 24524349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41263999 - 41264073
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||||||||||||| || ||||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  41263999 attaacggtcaaaattatgtattggtatatgtgaagtgattgacttggacatgtattttgaaatggatggagtat 41264073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5878505 - 5878581
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||| ||||||||||||||||| ||| | |||||| ||||||||||||||| ||||||||||||| |||||||||    
T  5878505 attaacagtcaaaattgtgcattgacatgtttgaagtggttgacttggacatgcattttgaaacggagggagtatta 5878581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38957359 - 38957425
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||| |||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||    
T  38957359 attaagggtcaaaattgtgcattggcatgtgtgaagtgcttgacttggacatatattttgaaacgga 38957425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 3100562 - 3100492
Alignment:
Q  3 taacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagt 73  Q
    |||| ||||||||||||||||| ||||| ||||||  |||| ||||||||||||||||||||||| |||||    
T  3100562 taacagtcaaaattgtgcattgacatatctgaagtgattgatttggacatgtattttgaaacggagggagt 3100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24287949 - 24288015
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||||||| |||||||||||||| |||||||| ||||| |  ||||||||||||||||||||    
T  24287949 attaacggtcaaagttgtgcattggcatgtgtgaagtcgttgattgcgacatgtattttgaaacgga 24288015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 38958827 - 38958761
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||| | ||||||    
T  38958827 gtcaaaattgtgcattgacatatgtgaagtggttgacttgaacatgtgttttgaaacgaagggagta 38958761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2766121 - 2766045
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||| |||||||||||||| ||| |||||| | | ||| ||||||||||||||||||||||| | |||||||    
T  2766121 attaacggttaaaattgtgcattgacatgtgtgaaatggctgatttggacatgtattttgaaacggaggaagtatta 2766045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8394535 - 8394598
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 64  Q
    |||||| || |||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||    
T  8394535 attaacagttaaaattgtacattgacatatatgaagtggttgacttggacatgtattttgaaac 8394598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4270181 - 4270107
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||||||||||||| ||||||  |||||||||||| ||| | ||||||||||||||| |||| || |||||||    
T  4270181 attaacggtcaaaattatgcattaacatatgtgaagtggttaatttggacatgtattttaaaacagagggagtat 4270107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22489347 - 22489285
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaa 63  Q
    ||||||| |||||||||||||||| ||||||| |||| ||||||||  |||||||||||||||    
T  22489347 attaacgatcaaaattgtgcattgacatatgttaagtggttgacttaaacatgtattttgaaa 22489285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 574429 - 574376
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||||| ||||    
T  574429 ccttacatatattatgcattgtctatatcaactgagctaagctcacaaggacat 574376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32998638 - 32998674
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagt 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  32998638 attaacggtcaaaattgtgcattggcatatgtgaagt 32998674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 27718916 - 27718955
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  27718916 atatattatgcattgtccatatcaactgagctaagctcac 27718955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 6038291 - 6038336
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||||    
T  6038291 ccttacatatattatgcattgtccatatcaactgagctaagttcac 6038336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11637971 - 11638043
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatt 76  Q
    |||||||||||||||||| ||||| ||||| |||||| ||||||||    ||||||||||||||||| | ||||||    
T  11637971 attaacggtcaaaattgttcattgacatatatgaagtggttgactt---tatgtattttgaaacggaggaagtatt 11638043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 30427770 - 30427729
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  30427770 atatattatgcattgtccataccaactgagctaagctcacaa 30427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33700146 - 33700073
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||| ||||||| ||||| |||||||| |||| ||| |||||||  ||||||||||||| |||||| ||||||    
T  33700146 attaatggtcaaagttgtgtattggcatgtgtgcagtggttgactgcgacatgtattttggaacggagggagta 33700073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 33451371 - 33451410
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  33451371 atatattatgcattatccataccaactgagctaagctcac 33451410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 2554234 - 2554276
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||    
T  2554234 atattttatgtattgtccatatcaactgagctaagctcacaag 2554276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 4461537 - 4461471
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||| | ||| |||||||| ||||||   ||||||||||||||| |||| ||||||    
T  4461537 gtcaaaattgtgcatcgtcatgtgtgaagtagttgacaacgacatgtattttgaagcggagggagta 4461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 7996979 - 7996937
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||||||||| || |||||| |||||||||||||||||||||    
T  7996979 atatattatgcgttgtccataccaactgagctaagctcacaag 7996937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 12910828 - 12910870
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| |||||||||||| ||||||||    
T  12910828 atatattatgcattgtccataccaactgagctaatctcacaag 12910870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18021058 - 18021132
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||| ||||||| ||||| |||| ||| |||| ||| |||||||   |||||||||| ||||||||||||||||    
T  18021058 attaatggtcaaagttgtgtattgccatgtgtgcagtggttgactgcaacatgtatttagaaacggatggagtat 18021132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18035287 - 18035361
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    ||||| ||||||| ||||   |||||||||| | ||| |||||||  |||||||||||| |||||||||||||||    
T  18035287 attaatggtcaaagttgtatgttggcatatgcgcagtggttgactacgacatgtattttaaaacggatggagtat 18035361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 18942957 - 18942915
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  18942957 atatattatgcattatccctaccaactgagctaagctcacaag 18942915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33921680 - 33921741
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    ||||| |||||||||||| ||||| ||||||||||   || |||||| |||||||||||||||||    
T  33921680 attaatggtcaaaattgtacattgacatatgtgaa---gtggacttgaacatgtattttgaaacg 33921741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35403706 - 35403768
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaa 63  Q
    ||||| |||||||||||| | ||| |||||||||| |  || |||||||||||||||||||||    
T  35403706 attaatggtcaaaattgtacgttgacatatgtgaaatgattaacttggacatgtattttgaaa 35403768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 18044454 - 18044425
Alignment:
Q  45 ttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||||||||||||||||||||    
T  18044454 ttggacatgtattttgaaacggatggagta 18044425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 37750021 - 37750066
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||||||||||||| | ||||||||||||||||| ||||| |||||    
T  37750021 atatattatgcattgttcatatcaactgagctaaactcacgagaac 37750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40204795 - 40204722
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||| ||||||||||||| |||||||  |||| ||| |||||||  ||||| || ||||||||||| ||||||    
T  40204795 attaatggtcaaaattgtgtattggcacgtgtgcagtggttgactgtgacatatactttgaaacggagggagta 40204722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 41625239 - 41625194
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| | |||| ||||||||||||||||||    
T  41625239 ccttacatatattatgcattattcataccaactgagctaagctcac 41625194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 616812 - 616780
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||| |||||||||    
T  616812 ttggacatgtattttgaaacggagggagtatta 616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 623205 - 623173
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||| |||||||||    
T  623205 ttggacatgtattttgaaacggagggagtatta 623173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 6235567 - 6235615
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    ||||| |||||||||||||  |||||| |||||||||||| ||||||||    
T  6235567 ccttacatatattatgcatcgtccataccaactgagctaaactcacaag 6235615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 8910003 - 8910043
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  8910003 atatattatgcattgtccttaccaactgagctaagctcaca 8910043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 24696028 - 24696068
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||||||||||||||| ||| ||||||    
T  24696028 atatattatgcattgtccatatcaactgagataatctcaca 24696068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 30623332 - 30623292
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  30623332 atatattatgcattgtccttaccaactgagctaagctcaca 30623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 32051554 - 32051594
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcaca 204  Q
    |||||||||||||| |||| | |||||||||||||||||||    
T  32051554 atatattatgcattgtccaaaccaactgagctaagctcaca 32051594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 35403545 - 35403513
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtatta 77  Q
    ||||||||||||||||||||||||| |||||||    
T  35403545 ttggacatgtattttgaaacggatgaagtatta 35403513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 44293619 - 44293575
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| |||||||||||||| || ||| ||||||||||||||||||    
T  44293619 cttacatatattatgcattgtctataccaactgagctaagctcac 44293575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9502700 - 9502624
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtatta 77  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  9502700 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagtatta 9502624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27109877 - 27109951
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  27109877 attaacggtcaaaattgtgcattgacatatgtgaagtggttgacttgaacatgtattttaaaacggatggagtat 27109951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 978266 - 978339
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  978266 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 978339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14634230 - 14634157
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  14634230 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 14634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33387408 - 33387481
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  33387408 attaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaacggagggagta 33387481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 11251307 - 11251369
Alignment:
Q  5 acggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  11251307 acggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgcaacgga 11251369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18094154 - 18094089
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgg 66  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  18094154 attaacggtcaaaattgtgcattgtcatatgtgaaatggttgacttggacatgtattttgaaacgg 18094089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40156387 - 40156462
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatg--tgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||| ||||||  | |||| |||||||||||||||||||||||||| |||||||||    
T  40156387 attaacggtcaaaattgtgcattgacatatgaattaagtggttgacttggacatgtattttgaaacagatggagta 40156462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30354943 - 30354872
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggag 72  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||| ||||    
T  30354943 attaacagtcaaaattgtgcattgacatatgtgaagttgttgacttaaatatgtattttgaaacggaaggag 30354872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7224354 - 7224420
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  7224354 attaacggtaaaaattgtgcattggcatatgtgaagtgattgacctggacatgtgttttgaaacgga 7224420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 8086093 - 8086031
Alignment:
Q  12 aaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  8086093 aaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaacggagggagta 8086031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 12446939 - 12446866
Alignment:
Q  2 ttaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||| ||| |||||||    
T  12446939 ttaatggtcaaaattgtgcattgacatatgtgaagtgattgacttggacatatattttgaaatggagggagtat 12446866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33587542 - 33587468
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| || |||||||||||||||||| ||||||||  ||||||| |||||||||||| ||||||| |||||||    
T  33587542 attaacagtaaaaattgtgcattggcatgtgtgaagtgattgacttagacatgtattttaaaacggagggagtat 33587468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25889452 - 25889526
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||| |||| ||||||||| |||| ||||||||||    |||||||| |||||||||||||||||||||||||||    
T  25889452 attatcggttaaaattgtgtattgacatatgtgaacagattgacttgaacatgtattttgaaacggatggagtat 25889526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34112146 - 34112212
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacgga 67  Q
    |||||| ||||||||||| ||||| ||| |||||||| ||||||||| ||||||||||| |||||||    
T  34112146 attaaccgtcaaaattgtacattgacatgtgtgaagtggttgacttgaacatgtattttaaaacgga 34112212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 39610363 - 39610409
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  39610363 atatattatgcattgtccatatcaactgagctaagctcacgagaaca 39610409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38916326 - 38916253
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||||||  |||||||||||||| |||||||| ||||| |  ||||| |||||||||||||| ||||||    
T  38916326 attaacggtcaaggttgtgcattggcatgtgtgaagtggttgattgcgacatatattttgaaacggagggagta 38916253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 22394079 - 22394035
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  22394079 cttacatatattatgcattgtccatatcaactgagctaagctcac 22394035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 17672316 - 17672370
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    ||||| |||||||||||||  ||| ||||||||||||||||||||| ||||||||    
T  17672316 ccttatatatattatgcatcgtccttatcaactgagctaagctcacgagaacatt 17672370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 10199064 - 10199019
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  10199064 ccttatatatattatgcattgtccataccaactgagctaagctcac 10199019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 17239397 - 17239450
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    ||||| |||||||||||||| |||||| ||||||||| ||||||||||| ||||    
T  17239397 ccttacatatattatgcattgtccataccaactgagcaaagctcacaaggacat 17239450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 19068461 - 19068506
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||    
T  19068461 atatattatgcattatccataccaactgagctaagctcaaaagaac 19068506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 23118067 - 23118120
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaacat 211  Q
    ||||| |||||||||||||| ||| ||||||||||| ||||||||| |||||||    
T  23118067 ccttacatatattatgcattgtccttatcaactgagttaagctcacgagaacat 23118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 26409298 - 26409253
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  26409298 ccttacatatattatgcattgtccataccaactgagctaagctcac 26409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 32283615 - 32283570
Alignment:
Q  167 tattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||    
T  32283615 tattatgcattgtccataccaactgagctaagctcacgagaacatt 32283570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11785799 - 11785735
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacg 65  Q
    |||||| ||||||||||||||||| ||||| | || | ||| ||||||||||||||||| |||||    
T  11785799 attaacagtcaaaattgtgcattgacatatttaaaatggttaacttggacatgtattttaaaacg 11785735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 25604022 - 25604061
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  25604022 atatattatgcactgtccatatcaactgagctaagctcac 25604061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 37932369 - 37932330
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  37932369 atatattatgcattgtccataccaactgagctaagctcac 37932330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 40715971 - 40716010
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  40715971 atatattatgcattgtccatatcaattgagctaagctcac 40716010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3472350 - 3472276
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagtat 75  Q
    |||||| ||||||||| | ||||  | ||| | |||| ||||||||| ||||||||||||||| |||||||||||    
T  3472350 attaacagtcaaaattatacattaacctatataaagtggttgacttgaacatgtattttgaaatggatggagtat 3472276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 8086263 - 8086297
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||||||| |||||||||||    
T  8086263 ttggacatgtattttgaaacggagggagtattatt 8086297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 8545011 - 8545057
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  8545011 atatattatgcattgtccttatcaactgagttaagctcacgagaaca 8545057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 10704353 - 10704395
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  10704353 atattttatgcattgtccataccaactgagctaagctcacaag 10704395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 12007577 - 12007507
Alignment:
Q  4 aacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    |||||||||| |||||||||||||| | |||||| ||| ||   |||||||||||||||| ||| ||||||    
T  12007577 aacggtcaaagttgtgcattggcatgtatgaagtagttaacaatgacatgtattttgaaatggagggagta 12007507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 16188863 - 16188821
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| ||||||||||||| |||||||    
T  16188863 atatattatgcattgtccataccaactgagctaagttcacaag 16188821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 16188965 - 16188923
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaag 206  Q
    |||||||||||||| |||||| ||||||||||||| |||||||    
T  16188965 atatattatgcattgtccataccaactgagctaagttcacaag 16188923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 33587702 - 33587736
Alignment:
Q  45 ttggacatgtattttgaaacggatggagtattatt 79  Q
    |||||||||||||||||||| ||||||||||||||    
T  33587702 ttggacatgtattttgaaacagatggagtattatt 33587736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 5614810 - 5614765
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  5614810 ccttacatatattatgcattatccatatcaactgagttaagttcac 5614765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 16076470 - 16076429
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||||||| ||||||||| ||||| |||||||||||    
T  16076470 atatattatgcattgtccatatcagctgagttaagctcacaa 16076429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 16133087 - 16133132
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||||||||||||| ||| || |||||||||||||||||| |||||    
T  16133087 atatattatgcattgtccttaccaactgagctaagctcacgagaac 16133132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 20927678 - 20927637
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaa 205  Q
    |||||||||| ||| |||||| ||||||||||||||||||||    
T  20927678 atatattatgtattgtccataccaactgagctaagctcacaa 20927637  T

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Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 29695060 - 29695015
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  29695060 ccttacatatattatgcattgtccatatcaactgagttaaggtcac 29695015  T

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Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 36561348 - 36561381
Alignment:
Q  46 tggacatgtattttgaaacggatggagtattatt 79  Q
    ||||||||||||||||||||||||||||| ||||    
T  36561348 tggacatgtattttgaaacggatggagtaatatt 36561381  T

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Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 4573082 - 4573126
Alignment:
Q  165 tatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    ||||||||||||| |||||| ||||||| |||||||||| |||||    
T  4573082 tatattatgcattgtccataccaactgaactaagctcacgagaac 4573126  T

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Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 17046373 - 17046329
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaa 208  Q
    |||||||||||||| |||||| |||||||| ||||||||| ||||    
T  17046373 atatattatgcattgtccataccaactgagttaagctcacgagaa 17046329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 20370152 - 20370200
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaacatt 212  Q
    |||||||||||||| ||| || |||||||||||||||||| || |||||    
T  20370152 atatattatgcattatccctaccaactgagctaagctcacgaggacatt 20370200  T

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Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 26655509 - 26655465
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||||||||||||| |||||| |||||||||| ||||||    
T  26655509 ccttacatatattatgcattgtccataccaactgagctgagctca 26655465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 26927094 - 26927050
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctca 202  Q
    ||||| |||||||||||||| |||||| |||||||||| ||||||    
T  26927094 ccttacatatattatgcattgtccataccaactgagctgagctca 26927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 27651546 - 27651598
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    ||||| |||||||||||||| ||| || ||||| || ||||||||||||||||    
T  27651546 ccttacatatattatgcattgtccttaccaactaagttaagctcacaagaaca 27651598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 42505911 - 42505875
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagct 200  Q
    |||||||||||||| |||||| |||||||||||||||    
T  42505911 atatattatgcattgtccataccaactgagctaagct 42505875  T

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Target: scaffold0003 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 161910 - 161841
Alignment:
Q  1 attaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatgg 70  Q
    |||||| ||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||||||    
T  161910 attaacagtcaaaattgtgcattgacatatgtaaagtggttgacttgaacatgtattttgaaacggatgg 161841  T

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Target: scaffold0295 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 13783 - 13717
Alignment:
Q  8 gtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaacggatggagta 74  Q
    ||||||||| ||||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  13783 gtcaaaattttgcattgacatatgtaaagtggttgacttgaacatgtattttgaaacggatggagta 13717  T

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Target: scaffold0350 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 1293 - 1248
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||||    
T  1293 ccttacatatattatgcattgtccatatcaactgagctaagttcac 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 17770 - 17725
Alignment:
Q  158 ccttaaatatattatgcattctccatatcaactgagctaagctcac 203  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||    
T  17770 ccttatatatattatgcattgtccaaatcaactgagctaagctcac 17725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 40037 - 39998
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcac 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  40037 atatattatgcattgtccataccaactgagctaagctcac 39998  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 35945 - 35995
Alignment:
Q  159 cttaaatatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||| ||||||| |||||| ||| ||||||||||||||||||||| |||||    
T  35945 cttacatatattgtgcattgtccctatcaactgagctaagctcacgagaac 35995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 244513 - 244479
Alignment:
Q  169 ttatgcattctccatatcaactgagctaagctcac 203  Q
    ||||||||| |||||||||||||||||||||||||    
T  244513 ttatgcattgtccatatcaactgagctaagctcac 244479  T

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Target: scaffold0077 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 9515 - 9560
Alignment:
Q  165 tatattatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    |||||||| |||| | |||| |||||||||||||||||||||||||    
T  9515 tatattatacatttttcataccaactgagctaagctcacaagaaca 9560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 63508 - 63467
Alignment:
Q  169 ttatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    ||||||||| |||||||||||||||||||| |||| ||||||    
T  63508 ttatgcattgtccatatcaactgagctaagttcacgagaaca 63467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 70840 - 70799
Alignment:
Q  169 ttatgcattctccatatcaactgagctaagctcacaagaaca 210  Q
    ||||||||| |||||||||||||||||||| |||| ||||||    
T  70840 ttatgcattgtccatatcaactgagctaagttcacgagaaca 70799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 75364 - 75319
Alignment:
Q  164 atatattatgcattctccatatcaactgagctaagctcacaagaac 209  Q
    |||||||||||||| ||| || |||||||||| |||||||||||||    
T  75364 atatattatgcattgtccttaccaactgagcttagctcacaagaac 75319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 74
Target Start/End: Original strand, 23885 - 23913
Alignment:
Q  46 tggacatgtattttgaaacggatggagta 74  Q
    |||||||||||||||||||||||||||||    
T  23885 tggacatgtattttgaaacggatggagta 23913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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