View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4476_low_9 (Length: 377)

Name: NF4476_low_9
Description: NF4476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4476_low_9
NF4476_low_9
[»] chr1 (4 HSPs)
chr1 (1-360)||(15196165-15196524)
chr1 (1-360)||(15216583-15216942)
chr1 (1-363)||(15195514-15195876)
chr1 (1-363)||(15215932-15216294)
[»] scaffold1961 (1 HSPs)
scaffold1961 (139-363)||(1-225)
[»] chr5 (6 HSPs)
chr5 (1-363)||(17563169-17563531)
chr5 (1-363)||(17570265-17570627)
chr5 (97-363)||(17690770-17691036)
chr5 (97-363)||(17683844-17684110)
chr5 (171-363)||(17702002-17702194)
chr5 (59-163)||(17622015-17622119)
[»] chr7 (6 HSPs)
chr7 (1-363)||(14765068-14765430)
chr7 (1-363)||(14757908-14758270)
chr7 (97-363)||(14661151-14661417)
chr7 (97-363)||(14652716-14652982)
chr7 (133-363)||(14750118-14750348)
chr7 (171-363)||(14627299-14627491)


Alignment Details
Target: chr1 (Bit Score: 276; Significance: 1e-154; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 15196165 - 15196524
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||| |||||| |||||||    
T  15196165 atctccttctccaccacaatagtaatcttcttttgagtgctagggtccaagaagtggctcactttatcaattacctcattcaggcgcatctcagccttct 15196264  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    | |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  15196265 ttagataatccccacaatcatagcgctcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcat 15196364  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||  ||||||||||||||||||||| | |||||    
T  15196365 ataaacggaaggacctaaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaa 15196464  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacagg 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15196465 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacagg 15196524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 15216583 - 15216942
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||| |||||| |||||||    
T  15216583 atctccttctccaccacaatagtaatcttcttttgagtgctagggtccaagaagtggctcactttatcaattacctcattcaggcgcatctcagccttct 15216682  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    | |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  15216683 ttagataatccccacaatcatagcgctcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcat 15216782  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||  ||||||||||||||||||||| | |||||    
T  15216783 ataaacggaaggacctaaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaa 15216882  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacagg 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15216883 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacagg 15216942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 15195514 - 15195876
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  15195514 atctccttctccaccacaatagtaatcttcttttgagtgctagggtcccagaagtggctcactctatcaattacctcattcaggcgcatctcagccttct 15195613  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | || ||| ||||| ||||||||| ||||||||||||     
T  15195614 tgagataatccccacaatcacagcactcaataaatttctgtgattcagcccggtagaactcggctggaagctgcagaaaaggattctcaaattcttgcac 15195713  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||| |||| | |||| ||||||  ||||||||| ||||||||||| | || ||    
T  15195714 ataaacggaaggtcctaaatccattagcatatttgttatatttctaatcacttttatgttaacaacttctccagcatagtacttgcatactaattcccaa 15195813  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15195814 agcgtattcgacaatcgagtccttatctggtttgaataaataacattttcgctccacaggttc 15195876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 15215932 - 15216294
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  15215932 atctccttctccaccacaatagtaatcttcttttgagtgctagggtcccagaagtggctcactctatcaattacctcattcaggcgcatctcagccttct 15216031  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | || ||| ||||| ||||||||| ||||||||||||     
T  15216032 tgagataatccccacaatcacagcactcaataaatttctgtgattcagcccggtagaactcggctggaagctgcagaaaaggattctcaaattcttgcac 15216131  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||| |||| | |||| ||||||  ||||||||| ||||||||||| | || ||    
T  15216132 ataaacggaaggtcctaaatccattagcatatttgttatatttctaatcacttttatgttaacaacttctccagcatagtacttgcatactaattcccaa 15216231  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15216232 agcgtattcgacaatcgagtccttatctggtttgaataaataacattttcgctccacaggttc 15216294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1961 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold1961
Description:

Target: scaffold1961; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 139 - 363
Target Start/End: Original strand, 1 - 225
Alignment:
Q  139 tgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgtta 238  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1 tgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatattcgtta 100  T
Q  239 tatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaata 338  Q
    | ||||||||||||||| ||||||  ||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||||||||||||||||    
T  101 tttttctaatcagttttttattaacgacttcctcagcatagtccttgcatattaatcccaaaagcatattcaaaaatcgagtccttatctggtttgaata 200  T
Q  339 aataacattttctctccacaggttc 363  Q
    |||||||||||||||||||||||||    
T  201 aataacattttctctccacaggttc 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 17563531 - 17563169
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    |||||||||||||||| | ||||||||||| ||| |||||||| ||| ||| |||||||||||||||||| | || |||||||   |||||| |||||||    
T  17563531 atctccttctccaccagagtagtaatcttcgtttcagtgctagggtccaagtagtggctcactctatcaagttcctcattcagatgcatctcagccttct 17563432  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    |||||||||||||| || ||||||||||||| ||| ||||||||||||| || |||||||||||||||  | |||| ||||||||| ||||||||| |      
T  17563431 tgagataatccccagaaccacagcactcaataaatatctgtgattcagcccgatagaactcagttgaagctagcagaaaaggattctcaaattcttcccc 17563332  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
    ||||||||||||||||  ||| |||||||| || |||||| |||||||||||  |||||||| ||||||  | |||   ||  ||| ||||| | |||||    
T  17563331 ataaacggaaggacctgtatcaattagcatctttgttatacttctaatcagtcctctattaacaacttcgccggcacgctcactgcgtactaattccaaa 17563232  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  17563231 agcatattcaacagtcgagtccttatctggtttgaatgaagaacattttctctccacaggttc 17563169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 17570627 - 17570265
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    ||||||||||| | |||| ||||||||||||||| |||||||| ||| ||| |||||| || ||||||  || || ||||||||| | ||||  | ||||    
T  17570627 atctccttctcgatcacactagtaatcttcttttcagtgctagggtccaagtagtggcacattctatctgtttcctcattcaggcacctctcaactttct 17570528  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    |||||||||| || |||||||||||||| || |||||||| |||||||| | ||||||||||| ||||| ||| || || | | || | |||||||||      
T  17570527 tgagataatcaccgcaatcacagcactcgataaatttctgagattcagccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctc 17570428  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
    |||||| |||| |||||||||||||||||| || || |||||| ||||||||| | |||||| | ||||| |||||   ||||||||||||| | |||||    
T  17570427 ataaacagaagaacctaaatccattagcatctttgtaatatttttaatcagttctatattaacatcttccccagcacgttccttgcatactaattccaaa 17570328  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||||||||||||| ||||||||| ||||| ||||| ||||||||||| ||| |||||||||||    
T  17570327 agcatattcgacagtcgagtcctgatctgttttgagtaaataacattctctgtccacaggttc 17570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 363
Target Start/End: Original strand, 17690770 - 17691036
Alignment:
Q  97 ttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattctt 196  Q
    |||||||||||||||||||| ||| | |||| |||  ||||||| ||||||||   |||  | |||| | ||| |||||| |||||| || ||||| |||    
T  17690770 ttcttgagataatccccacagtcaaaacacttaatatatttctgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatactt 17690869  T
Q  197 gcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcc 296  Q
    ||  |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | ||||| | |||   |||||| |||| |   |    
T  17690870 gctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttgaatacaaactc 17690969  T
Q  297 caaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17690970 caaaagcatattcgacaatcgattccttatctggtttgaataaataacattttctctccacaggttc 17691036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 363
Target Start/End: Original strand, 17683844 - 17684110
Alignment:
Q  97 ttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattctt 196  Q
    ||||||||||||||||| || ||||| ||||| ||  ||||||  ||||||||   |||  | |||| | ||| |||||| |||||| || |||||||||    
T  17683844 ttcttgagataatccccgcagtcacaacactcgatatatttctcggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaattctt 17683943  T
Q  197 gcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcc 296  Q
    ||  |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | ||||| | ||| | |||||  |||| |   |    
T  17683944 gctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacactccttaaatacaaactc 17684043  T
Q  297 caaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||    
T  17684044 caaaagcgtattcgacagttgagtccttatctggtttgaataaataacaatttctctccacaggttc 17684110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 171 - 363
Target Start/End: Original strand, 17702002 - 17702194
Alignment:
Q  171 ttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcc 270  Q
    |||||| |||||| || ||||| |||||  |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | |||||    
T  17702002 ttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttcc 17702101  T
Q  271 tcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
     | |||   || ||   ||| |   |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17702102 ccggcacgctctttaagtacaaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 17702194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 17622015 - 17622119
Alignment:
Q  59 tcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaa 158  Q
    |||||||||| | | || ||||||| | | |||| || |||||||||||||||||||||||||| ||  |||| |||||||| | ||| || | ||||||    
T  17622015 tcactctatccaattcctcattcagccgcctctcagctttcttgagataatccccacaatcacaacatccaataaatttctgagtttctgccctgtagaa 17622114  T
Q  159 ctcag 163  Q
    |||||    
T  17622115 ctcag 17622119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 14765068 - 14765430
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    |||||||||||||||| | ||||||| ||| ||| |||||||| ||| ||| |||||||||||||||||| | || |||||||   |||||| |||||||    
T  14765068 atctccttctccaccagagtagtaattttcgtttcagtgctagggtccaagtagtggctcactctatcaagttcctcattcagatgcatctcagccttct 14765167  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    |||||||||||||| || ||||||||||||| ||| ||||||||||||| || |||||||||||||||  | |||| ||||||||| ||||||||| |      
T  14765168 tgagataatccccagaaccacagcactcaataaatatctgtgattcagcccgatagaactcagttgaagctagcagaaaaggattctcaaattcttcctc 14765267  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
    ||||||||||||||||  ||| |||||||| || |||||| |||||||||||  |||||||| ||||||  | |||   ||  ||  ||||| | |||||    
T  14765268 ataaacggaaggacctgtatcaattagcatctttgttatacttctaatcagtcctctattaacaacttcgccggcacgctcactgtgtactaattccaaa 14765367  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  14765368 agcatattcaacagtcgagtccttatctggtttgaatgaagaacattttctctccacaggttc 14765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 14757908 - 14758270
Alignment:
Q  1 atctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttct 100  Q
    ||||||||||| | |||| ||||||||||||||| |||||||| ||| ||| |||||| || ||||||  || || ||||||||| | ||||  | ||||    
T  14757908 atctccttctcgatcacactagtaatcttcttttcagtgctagggtctaagtagtggcacattctatctgtttcctcattcaggcacctctcaactttct 14758007  T
Q  101 tgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcat 200  Q
    |||||||||| || |||||||||||||| || |||||||| |||||||| | ||||||||||| ||||| ||| || || | | || | |||||||||      
T  14758008 tgagataatcaccgcaatcacagcactcgataaatttctgagattcagccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctc 14758107  T
Q  201 ataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaa 300  Q
     ||||| |||| |||||||||||||||||| || || |||||| ||||||||| | |||||| | ||||| |||||   ||||||||||||| | |||||    
T  14758108 ttaaacagaagaacctaaatccattagcatctttgtaatatttttaatcagttctatattaacatcttccccagcacgttccttgcatactaattccaaa 14758207  T
Q  301 agcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||||||||||||| ||||||||| ||||| ||||| ||||||||||| ||| |||||||||||    
T  14758208 agcatattcgacagtcgagtcctgatctgttttgagtaaataacattctctgtccacaggttc 14758270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 363
Target Start/End: Complemental strand, 14661417 - 14661151
Alignment:
Q  97 ttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattctt 196  Q
    ||||||||||||||| | || ||||||||||||||  ||||||  ||||||||   |||  | |||| | ||| |||||| |||||| || |||||||||    
T  14661417 ttcttgagataatcctcgcagtcacagcactcaatatatttctcagattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaattctt 14661318  T
Q  197 gcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcc 296  Q
    ||  |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | ||||| | |||   |||||| |||| |   |    
T  14661317 gctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttgaatacaaactc 14661218  T
Q  297 caaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14661217 caaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 14661151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 363
Target Start/End: Complemental strand, 14652982 - 14652716
Alignment:
Q  97 ttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattctt 196  Q
    |||||||||||||||||||| ||| | |||| |||  ||||||| ||||||||   |||  | |||| | ||| |||||| |||||| || ||||| |||    
T  14652982 ttcttgagataatccccacagtcaaaacacttaatatatttctgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatactt 14652883  T
Q  197 gcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcc 296  Q
    ||  |||||| ||||||||||||||||| ||||| || || | |||||||||||||| ||| |||| | ||||| | |||   |||||  |||| |   |    
T  14652882 gctcataaacagaaggacctaaatccatcagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttaaatacaaactc 14652783  T
Q  297 caaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14652782 caaaagcgtattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 14652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 133 - 363
Target Start/End: Original strand, 14750118 - 14750348
Alignment:
Q  133 aatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatat 232  Q
    |||||||| |||||||| |  |||||||||| ||||| ||| |  |||||| || ||||||||| |  ||||||  | |||||||||||||||||||| |    
T  14750118 aatttctgggattcagccctatagaactcagctgaaacttgtaaaaaaggagtctcaaattcttcctcataaacaaagggacctaaatccattagcatct 14750217  T
Q  233 tcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtt 332  Q
    | | || |||||||||| ||| |||||||| | ||||| ||||||  |||||| |||| |   |||||||| ||||||||| ||||||||||||||||||    
T  14750218 ttgatagatttctaatcggttctctattaacatcttccgcagcatgctccttgaatacaaactccaaaagcgtattcgacagtcgagtccttatctggtt 14750317  T
Q  333 tgaataaataacattttctctccacaggttc 363  Q
    ||||||||||||||| |||||||||||||||    
T  14750318 tgaataaataacattctctctccacaggttc 14750348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 171 - 363
Target Start/End: Complemental strand, 14627491 - 14627299
Alignment:
Q  171 ttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcc 270  Q
    |||||| |||||| || ||||| |||||  |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | |||||    
T  14627491 ttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttcc 14627392  T
Q  271 tcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc 363  Q
     | |||   || ||  |||| |   |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14627391 ccggcacgctctttaaatacaaactccaaaagcgtattcgacaatcgattccttatctggtttgaataaataacattttctctccacaggttc 14627299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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