View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4477-Insertion-4 (Length: 240)
Name: NF4477-Insertion-4
Description: NF4477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4477-Insertion-4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 247122 - 246888
Alignment:
| Q |
8 |
tccacacccaaggactggaatttacttccctgttggccatgaatgggtaatggaagatgttcctgatggcgctgccaccttctccgagacctgttacttc |
107 |
Q |
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| T |
247122 |
tccacacccaaggactggaatttacttccctgttggccatgaatgggtaatggaagatgttcctgatggtgctgccaccttctccgagacctgttacttc |
247023 |
T |
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| Q |
108 |
agaaactaatcatgttttctaattcatgttattgctagctattgtggtcggagtggatagcattcaaaatgaactaatgtaatatcatacgtatacctcc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
247022 |
agaaactaatcatgttttctaattcatgttattgctagctattgtggtcggagtggatggcattcaaaatgaactaatgtaatatcatacgtatacctcc |
246923 |
T |
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| Q |
208 |
atcaccaccagaaaataa--acactatgtttacta |
240 |
Q |
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|||||||||||||||||| ||||||||||||||| |
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| T |
246922 |
atcaccaccagaaaataaatacactatgtttacta |
246888 |
T |
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