View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4478-insertion-1 (Length: 992)

Name: NF4478-insertion-1
Description: NF4478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4478-insertion-1
NF4478-insertion-1
[»] chr7 (67 HSPs)
chr7 (22-987)||(37514540-37515500)
chr7 (376-515)||(43861971-43862110)
chr7 (353-515)||(43925460-43925622)
chr7 (353-515)||(10047875-10048037)
chr7 (353-515)||(47341824-47341986)
chr7 (353-515)||(48804631-48804793)
chr7 (353-515)||(1605889-1606051)
chr7 (353-515)||(27028227-27028389)
chr7 (376-516)||(3353396-3353535)
chr7 (353-507)||(22973915-22974069)
chr7 (353-515)||(22993366-22993528)
chr7 (353-515)||(34659174-34659336)
chr7 (353-515)||(43346778-43346940)
chr7 (376-515)||(36619253-36619392)
chr7 (353-495)||(4195221-4195363)
chr7 (353-487)||(17748409-17748543)
chr7 (367-509)||(18785631-18785773)
chr7 (367-477)||(42210299-42210409)
chr7 (376-509)||(13095829-13095962)
chr7 (367-508)||(21530710-21530851)
chr7 (353-454)||(22268089-22268190)
chr7 (354-482)||(1797409-1797537)
chr7 (367-495)||(16802085-16802213)
chr7 (387-515)||(38578866-38578994)
chr7 (353-509)||(45960008-45960163)
chr7 (376-515)||(4705983-4706122)
chr7 (377-495)||(39474911-39475030)
chr7 (353-509)||(5039423-5039579)
chr7 (353-490)||(4228778-4228912)
chr7 (367-509)||(14535253-14535395)
chr7 (353-514)||(26423288-26423448)
chr7 (353-514)||(27875088-27875248)
chr7 (380-469)||(44336868-44336957)
chr7 (355-505)||(23658130-23658279)
chr7 (354-515)||(5069814-5069975)
chr7 (390-515)||(48244355-48244480)
chr7 (403-516)||(3603351-3603468)
chr7 (355-479)||(42032046-42032170)
chr7 (404-482)||(30827291-30827369)
chr7 (353-461)||(14537814-14537922)
chr7 (456-515)||(32768988-32769047)
chr7 (353-487)||(14650265-14650399)
chr7 (354-463)||(24969377-24969484)
chr7 (353-482)||(4973142-4973271)
chr7 (380-469)||(21190825-21190914)
chr7 (354-515)||(29151889-29152050)
chr7 (353-422)||(34127712-34127781)
chr7 (357-437)||(9685691-9685771)
chr7 (403-515)||(10317745-10317856)
chr7 (403-479)||(49142704-49142780)
chr7 (380-479)||(365115-365214)
chr7 (368-487)||(7774409-7774528)
chr7 (403-482)||(22573811-22573889)
chr7 (355-470)||(29805484-29805598)
chr7 (429-516)||(41945497-41945584)
chr7 (376-507)||(45447941-45448072)
chr7 (376-482)||(39420809-39420914)
chr7 (353-481)||(9813924-9814049)
chr7 (353-470)||(19914747-19914863)
chr7 (431-515)||(48551883-48551967)
chr7 (398-505)||(45697199-45697305)
chr7 (376-443)||(45853591-45853658)
chr7 (376-490)||(20247194-20247307)
chr7 (390-508)||(28396166-28396284)
chr7 (429-515)||(28744186-28744272)
chr7 (446-495)||(24983438-24983487)
chr7 (377-454)||(48224791-48224867)
[»] chr4 (75 HSPs)
chr4 (353-515)||(53599010-53599172)
chr4 (353-515)||(29895737-29895899)
chr4 (376-515)||(20128282-20128421)
chr4 (376-515)||(47078431-47078570)
chr4 (353-515)||(38165977-38166139)
chr4 (353-488)||(1446776-1446911)
chr4 (353-516)||(14123966-14124129)
chr4 (353-515)||(2559257-2559419)
chr4 (387-509)||(3159474-3159596)
chr4 (355-481)||(5472881-5473007)
chr4 (376-514)||(33647694-33647832)
chr4 (376-515)||(36145214-36145353)
chr4 (378-516)||(42722575-42722713)
chr4 (353-515)||(55920984-55921146)
chr4 (376-515)||(8888995-8889134)
chr4 (353-514)||(13073488-13073649)
chr4 (387-515)||(7246645-7246773)
chr4 (353-516)||(15829649-15829812)
chr4 (376-515)||(24850626-24850764)
chr4 (377-516)||(40272329-40272468)
chr4 (353-487)||(6779161-6779295)
chr4 (353-515)||(24166400-24166562)
chr4 (353-487)||(43458563-43458697)
chr4 (353-515)||(52950032-52950194)
chr4 (381-509)||(21429279-21429407)
chr4 (354-514)||(40780861-40781021)
chr4 (376-515)||(38168230-38168368)
chr4 (353-481)||(1940810-1940935)
chr4 (353-487)||(3574473-3574607)
chr4 (353-515)||(38075383-38075545)
chr4 (387-515)||(15732447-15732575)
chr4 (362-505)||(36262776-36262917)
chr4 (387-479)||(48015108-48015200)
chr4 (353-481)||(49952179-49952307)
chr4 (353-515)||(27248378-27248538)
chr4 (367-481)||(15839968-15840081)
chr4 (353-515)||(41339395-41339556)
chr4 (432-485)||(23788426-23788479)
chr4 (354-479)||(29588687-29588812)
chr4 (387-516)||(43468331-43468460)
chr4 (353-481)||(4736547-4736675)
chr4 (381-481)||(14567937-14568037)
chr4 (367-503)||(20532420-20532556)
chr4 (353-437)||(41162959-41163043)
chr4 (353-481)||(48317308-48317436)
chr4 (358-509)||(295538-295688)
chr4 (370-481)||(49260698-49260809)
chr4 (376-470)||(20421747-20421840)
chr4 (403-516)||(30317233-30317346)
chr4 (354-514)||(6032643-6032800)
chr4 (377-515)||(10540990-10541127)
chr4 (353-515)||(26479948-26480110)
chr4 (415-504)||(9548723-9548812)
chr4 (353-515)||(31588634-31588798)
chr4 (403-516)||(45721086-45721199)
chr4 (357-437)||(13552068-13552148)
chr4 (353-421)||(34667695-34667763)
chr4 (440-515)||(14077983-14078058)
chr4 (438-509)||(14597905-14597976)
chr4 (431-506)||(50485971-50486046)
chr4 (377-498)||(1123806-1123928)
chr4 (425-515)||(14567261-14567351)
chr4 (377-449)||(13436788-13436858)
chr4 (354-515)||(14858662-14858822)
chr4 (353-422)||(27531749-27531818)
chr4 (438-515)||(54946284-54946361)
chr4 (380-481)||(55005339-55005440)
chr4 (403-515)||(16645118-16645230)
chr4 (429-504)||(3507296-3507371)
chr4 (416-515)||(35359749-35359848)
chr4 (376-482)||(7741898-7742004)
chr4 (445-491)||(8064821-8064867)
chr4 (353-515)||(12703544-12703706)
chr4 (378-488)||(42722405-42722514)
chr4 (429-515)||(47682381-47682467)
[»] chr1 (80 HSPs)
chr1 (353-515)||(41663856-41664018)
chr1 (353-515)||(5855468-5855630)
chr1 (353-515)||(49078060-49078222)
chr1 (367-515)||(26325772-26325920)
chr1 (376-515)||(45361882-45362021)
chr1 (353-515)||(18915813-18915975)
chr1 (353-506)||(15465911-15466064)
chr1 (367-515)||(43959821-43959969)
chr1 (376-515)||(8763960-8764099)
chr1 (380-515)||(18649352-18649487)
chr1 (353-515)||(17642004-17642166)
chr1 (367-509)||(30927733-30927875)
chr1 (370-515)||(16956429-16956574)
chr1 (376-487)||(14254296-14254407)
chr1 (376-506)||(17358480-17358610)
chr1 (376-481)||(40288511-40288616)
chr1 (371-515)||(34719740-34719884)
chr1 (376-487)||(10336485-10336596)
chr1 (387-490)||(13262063-13262166)
chr1 (353-480)||(33004050-33004177)
chr1 (353-480)||(48798105-48798232)
chr1 (353-487)||(10422734-10422868)
chr1 (390-516)||(16263528-16263654)
chr1 (354-484)||(47312930-47313059)
chr1 (367-515)||(9659179-9659326)
chr1 (355-515)||(14357703-14357863)
chr1 (353-509)||(17092483-17092639)
chr1 (355-487)||(32150950-32151082)
chr1 (376-515)||(2980931-2981070)
chr1 (353-515)||(11397889-11398050)
chr1 (353-487)||(33418143-33418277)
chr1 (376-454)||(34334356-34334434)
chr1 (373-487)||(48761142-48761256)
chr1 (354-515)||(10172971-10173132)
chr1 (378-515)||(50503361-50503498)
chr1 (383-515)||(28416922-28417054)
chr1 (355-487)||(32142874-32143005)
chr1 (399-509)||(35908749-35908858)
chr1 (355-482)||(32819-32946)
chr1 (354-469)||(2567223-2567338)
chr1 (353-508)||(5503977-5504132)
chr1 (353-504)||(12744534-12744685)
chr1 (353-504)||(12755524-12755675)
chr1 (353-468)||(15238153-15238268)
chr1 (394-515)||(26660125-26660245)
chr1 (353-469)||(31152662-31152778)
chr1 (407-515)||(44969665-44969772)
chr1 (388-515)||(45726433-45726560)
chr1 (377-495)||(2270276-2270390)
chr1 (353-503)||(12036756-12036906)
chr1 (376-481)||(5063878-5063982)
chr1 (387-515)||(37339799-37339928)
chr1 (407-487)||(33498867-33498947)
chr1 (430-505)||(10507721-10507796)
chr1 (367-482)||(17389732-17389846)
chr1 (376-515)||(50371834-50371973)
chr1 (380-482)||(17988693-17988794)
chr1 (386-480)||(28324615-28324709)
chr1 (353-482)||(31576580-31576709)
chr1 (353-470)||(34877936-34878053)
chr1 (412-508)||(21849212-21849307)
chr1 (376-480)||(25165371-25165473)
chr1 (367-495)||(25178596-25178723)
chr1 (429-509)||(50094926-50095006)
chr1 (440-515)||(4581682-4581757)
chr1 (428-515)||(5143154-5143240)
chr1 (412-515)||(35211172-35211275)
chr1 (367-509)||(9853283-9853425)
chr1 (353-510)||(21429609-21429760)
chr1 (377-495)||(26258666-26258783)
chr1 (376-422)||(41743242-41743288)
chr1 (353-454)||(8905212-8905312)
chr1 (353-454)||(51437415-51437516)
chr1 (367-479)||(6563401-6563513)
chr1 (383-487)||(13265914-13266018)
chr1 (355-422)||(892390-892457)
chr1 (407-506)||(42710147-42710246)
chr1 (387-466)||(45536688-45536767)
chr1 (438-508)||(17899887-17899957)
chr1 (353-454)||(18808211-18808312)
[»] chr3 (84 HSPs)
chr3 (353-516)||(54261171-54261334)
chr3 (353-514)||(49198296-49198457)
chr3 (353-516)||(45877399-45877562)
chr3 (353-515)||(13893871-13894033)
chr3 (353-515)||(15320131-15320293)
chr3 (353-515)||(29127864-29128026)
chr3 (353-515)||(51060281-51060443)
chr3 (376-514)||(6462380-6462518)
chr3 (376-504)||(49543487-49543615)
chr3 (353-488)||(42412801-42412936)
chr3 (353-515)||(25294905-25295067)
chr3 (353-515)||(29762155-29762317)
chr3 (353-482)||(33251607-33251736)
chr3 (378-514)||(53649697-53649833)
chr3 (354-468)||(31072824-31072938)
chr3 (353-515)||(48341965-48342127)
chr3 (353-490)||(3762996-3763132)
chr3 (380-481)||(15795528-15795628)
chr3 (367-508)||(29135872-29136013)
chr3 (390-515)||(54237430-54237555)
chr3 (353-509)||(10040502-10040657)
chr3 (353-481)||(35315901-35316029)
chr3 (367-481)||(30767281-30767395)
chr3 (353-482)||(35923656-35923785)
chr3 (353-514)||(51682955-51683116)
chr3 (376-480)||(928568-928672)
chr3 (355-515)||(3136694-3136853)
chr3 (353-481)||(10855329-10855457)
chr3 (353-509)||(26207807-26207963)
chr3 (378-482)||(52364833-52364937)
chr3 (353-509)||(55069685-55069841)
chr3 (387-506)||(34662328-34662447)
chr3 (380-515)||(47219116-47219251)
chr3 (403-509)||(8362572-8362678)
chr3 (353-463)||(11687161-11687271)
chr3 (367-515)||(26361967-26362113)
chr3 (387-515)||(35998571-35998698)
chr3 (380-515)||(7310703-7310838)
chr3 (404-514)||(3507534-3507644)
chr3 (353-515)||(41630512-41630674)
chr3 (353-482)||(3755515-3755644)
chr3 (421-481)||(7648753-7648813)
chr3 (367-515)||(28572211-28572359)
chr3 (353-461)||(46529924-46530032)
chr3 (380-516)||(47471804-47471939)
chr3 (376-515)||(7328812-7328950)
chr3 (416-515)||(19146969-19147068)
chr3 (376-454)||(7612987-7613065)
chr3 (353-515)||(7650172-7650334)
chr3 (401-515)||(8164546-8164660)
chr3 (387-481)||(47749139-47749232)
chr3 (431-515)||(15084945-15085029)
chr3 (408-507)||(26043812-26043911)
chr3 (404-515)||(41219588-41219699)
chr3 (445-515)||(49021203-49021273)
chr3 (373-490)||(24146353-24146470)
chr3 (402-487)||(30045815-30045900)
chr3 (403-504)||(45402362-45402463)
chr3 (402-490)||(2029292-2029380)
chr3 (353-481)||(32873583-32873710)
chr3 (356-468)||(49082772-49082884)
chr3 (440-495)||(2668093-2668148)
chr3 (355-438)||(30735022-30735105)
chr3 (376-515)||(38394175-38394312)
chr3 (456-515)||(47164154-47164213)
chr3 (353-479)||(4638099-4638225)
chr3 (391-477)||(7139735-7139821)
chr3 (411-509)||(24506654-24506751)
chr3 (367-481)||(39849031-39849144)
chr3 (373-462)||(6286090-6286178)
chr3 (380-481)||(28242250-28242351)
chr3 (353-454)||(37092566-37092667)
chr3 (377-482)||(47303522-47303627)
chr3 (432-509)||(50405609-50405686)
chr3 (354-418)||(11249843-11249907)
chr3 (380-504)||(25515759-25515882)
chr3 (373-509)||(40660333-40660469)
chr3 (387-422)||(11025465-11025500)
chr3 (376-515)||(26923261-26923400)
chr3 (445-508)||(43330739-43330802)
chr3 (413-515)||(15285733-15285835)
chr3 (376-502)||(40944851-40944976)
chr3 (451-509)||(50753347-50753405)
chr3 (376-417)||(33560828-33560869)
[»] chr6 (40 HSPs)
chr6 (353-515)||(21898597-21898759)
chr6 (376-515)||(6606096-6606235)
chr6 (354-515)||(13036003-13036164)
chr6 (353-508)||(9179742-9179897)
chr6 (376-487)||(34954646-34954757)
chr6 (353-515)||(5253222-5253384)
chr6 (353-495)||(19230578-19230718)
chr6 (380-481)||(12606406-12606507)
chr6 (376-495)||(10311488-10311607)
chr6 (376-515)||(13468905-13469044)
chr6 (353-515)||(14107357-14107519)
chr6 (353-505)||(2271312-2271462)
chr6 (376-515)||(30788852-30788989)
chr6 (380-515)||(3601060-3601195)
chr6 (367-478)||(9366459-9366570)
chr6 (376-515)||(19089470-19089609)
chr6 (353-515)||(8611973-8612135)
chr6 (353-487)||(29333166-29333299)
chr6 (353-477)||(8932610-8932734)
chr6 (353-477)||(8944076-8944200)
chr6 (376-479)||(29444800-29444903)
chr6 (382-515)||(12635792-12635925)
chr6 (354-482)||(9147251-9147379)
chr6 (355-482)||(3587977-3588104)
chr6 (353-516)||(24671864-24672027)
chr6 (367-514)||(32157167-32157314)
chr6 (353-438)||(3030694-3030779)
chr6 (412-481)||(5029825-5029894)
chr6 (373-465)||(11142572-11142664)
chr6 (406-481)||(13391289-13391363)
chr6 (353-515)||(8938660-8938822)
chr6 (391-487)||(8888869-8888965)
chr6 (431-515)||(9633624-9633708)
chr6 (377-443)||(4596106-4596172)
chr6 (353-516)||(15643832-15643989)
chr6 (407-465)||(33859368-33859426)
chr6 (446-515)||(14783419-14783488)
chr6 (353-422)||(21016843-21016912)
chr6 (378-443)||(26476434-26476499)
chr6 (355-459)||(32048402-32048506)
[»] scaffold0170 (1 HSPs)
scaffold0170 (353-505)||(9793-9945)
[»] chr2 (70 HSPs)
chr2 (367-515)||(25540403-25540551)
chr2 (353-515)||(7747219-7747381)
chr2 (353-515)||(11069823-11069985)
chr2 (353-515)||(38962708-38962870)
chr2 (353-516)||(12864169-12864332)
chr2 (353-490)||(34356151-34356288)
chr2 (356-515)||(6358150-6358309)
chr2 (354-509)||(21286390-21286545)
chr2 (376-515)||(41220603-41220742)
chr2 (354-487)||(3848941-3849074)
chr2 (353-515)||(10026615-10026777)
chr2 (354-515)||(37560119-37560280)
chr2 (353-465)||(19976856-19976968)
chr2 (353-516)||(14169607-14169770)
chr2 (377-487)||(3643914-3644024)
chr2 (377-515)||(10823029-10823167)
chr2 (354-515)||(28616378-28616540)
chr2 (353-515)||(38005347-38005509)
chr2 (378-515)||(44139454-44139591)
chr2 (403-515)||(12455305-12455417)
chr2 (376-515)||(9360747-9360886)
chr2 (353-515)||(29422160-29422322)
chr2 (373-515)||(34346286-34346428)
chr2 (377-515)||(35946708-35946845)
chr2 (353-514)||(10046477-10046637)
chr2 (376-509)||(39201513-39201646)
chr2 (353-481)||(8410076-8410204)
chr2 (353-480)||(13026445-13026572)
chr2 (377-515)||(16034906-16035044)
chr2 (353-487)||(22593080-22593213)
chr2 (353-487)||(42770678-42770812)
chr2 (358-515)||(34722631-34722787)
chr2 (353-481)||(331446-331574)
chr2 (353-514)||(20612534-20612697)
chr2 (376-515)||(44945562-44945700)
chr2 (354-477)||(45263704-45263827)
chr2 (353-515)||(3811690-3811852)
chr2 (353-515)||(18902529-18902691)
chr2 (377-509)||(10669561-10669693)
chr2 (377-485)||(15234090-15234198)
chr2 (367-482)||(25549687-25549802)
chr2 (367-481)||(7787015-7787129)
chr2 (390-516)||(39806883-39807009)
chr2 (353-515)||(14853365-14853528)
chr2 (367-480)||(41031940-41032052)
chr2 (353-468)||(2149240-2149356)
chr2 (353-481)||(2550813-2550941)
chr2 (353-481)||(21180347-21180475)
chr2 (367-482)||(16813197-16813311)
chr2 (367-482)||(16852476-16852590)
chr2 (353-515)||(44193424-44193589)
chr2 (353-515)||(2528340-2528502)
chr2 (380-482)||(2784905-2785006)
chr2 (403-515)||(27725935-27726047)
chr2 (387-470)||(15079462-15079545)
chr2 (384-465)||(40968964-40969045)
chr2 (353-486)||(18649054-18649187)
chr2 (414-482)||(24179575-24179642)
chr2 (416-515)||(28525454-28525554)
chr2 (367-515)||(33005711-33005858)
chr2 (407-481)||(29653626-29653700)
chr2 (432-514)||(29802834-29802916)
chr2 (407-477)||(43303329-43303399)
chr2 (376-437)||(41187677-41187738)
chr2 (354-481)||(30721888-30722015)
chr2 (407-485)||(16636094-16636172)
chr2 (353-515)||(34130301-34130461)
chr2 (353-422)||(23500774-23500842)
chr2 (407-504)||(25604594-25604690)
chr2 (430-514)||(34881005-34881090)
[»] chr5 (72 HSPs)
chr5 (367-515)||(25417182-25417330)
chr5 (353-515)||(1538377-1538539)
chr5 (353-515)||(5731919-5732081)
chr5 (353-495)||(19572670-19572812)
chr5 (353-515)||(38897718-38897879)
chr5 (353-515)||(41163459-41163620)
chr5 (353-514)||(37263187-37263347)
chr5 (376-508)||(7308370-7308502)
chr5 (376-515)||(42086296-42086435)
chr5 (353-515)||(4016254-4016416)
chr5 (353-514)||(20525784-20525945)
chr5 (376-515)||(13664229-13664368)
chr5 (353-515)||(20682616-20682779)
chr5 (390-497)||(21149717-21149824)
chr5 (353-515)||(9812818-9812980)
chr5 (353-487)||(30349525-30349659)
chr5 (353-470)||(26077087-26077204)
chr5 (391-515)||(12081892-12082016)
chr5 (376-515)||(8513488-8513627)
chr5 (376-487)||(14588644-14588755)
chr5 (353-515)||(14728028-14728191)
chr5 (353-509)||(18136281-18136441)
chr5 (376-487)||(23247378-23247489)
chr5 (353-515)||(12704960-12705122)
chr5 (353-515)||(12766077-12766239)
chr5 (376-502)||(30995090-30995216)
chr5 (353-515)||(42861217-42861379)
chr5 (353-509)||(3653919-3654073)
chr5 (394-515)||(23383644-23383765)
chr5 (373-482)||(35638065-35638174)
chr5 (376-487)||(14974351-14974462)
chr5 (362-509)||(28862780-28862927)
chr5 (353-515)||(7866527-7866689)
chr5 (353-495)||(9168272-9168412)
chr5 (403-481)||(18262651-18262729)
chr5 (406-515)||(9805003-9805112)
chr5 (390-495)||(24653831-24653935)
chr5 (353-470)||(28857074-28857191)
chr5 (394-515)||(41800964-41801085)
chr5 (353-487)||(39728333-39728467)
chr5 (380-481)||(5079304-5079405)
chr5 (406-514)||(42291505-42291613)
chr5 (353-516)||(2485143-2485305)
chr5 (376-463)||(11845852-11845939)
chr5 (367-490)||(14152010-14152133)
chr5 (353-468)||(35403558-35403673)
chr5 (376-454)||(1898970-1899048)
chr5 (380-514)||(15034048-15034182)
chr5 (353-462)||(18294536-18294644)
chr5 (353-466)||(38297012-38297125)
chr5 (376-454)||(16755030-16755108)
chr5 (421-515)||(43399142-43399236)
chr5 (353-422)||(6767143-6767212)
chr5 (376-477)||(24498952-24499052)
chr5 (416-477)||(25467419-25467480)
chr5 (429-506)||(43212513-43212590)
chr5 (391-515)||(7336604-7336727)
chr5 (405-465)||(20705561-20705621)
chr5 (403-479)||(38369696-38369771)
chr5 (414-481)||(24463919-24463986)
chr5 (376-487)||(24875314-24875425)
chr5 (376-422)||(20223025-20223071)
chr5 (395-481)||(25452914-25452999)
chr5 (406-480)||(35006769-35006843)
chr5 (353-422)||(28856923-28856992)
chr5 (406-454)||(40060295-40060343)
chr5 (405-514)||(21487615-21487721)
chr5 (376-479)||(35245041-35245144)
chr5 (413-515)||(16757384-16757486)
chr5 (418-504)||(32874798-32874884)
chr5 (376-422)||(35813090-35813136)
chr5 (432-481)||(6764490-6764539)
[»] chr8 (50 HSPs)
chr8 (353-515)||(3418512-3418674)
chr8 (353-515)||(8141051-8141213)
chr8 (353-515)||(2467117-2467279)
chr8 (353-495)||(6100421-6100563)
chr8 (353-470)||(13085473-13085590)
chr8 (353-498)||(1012993-1013138)
chr8 (377-514)||(15884556-15884692)
chr8 (353-481)||(14666104-14666232)
chr8 (353-509)||(44893283-44893439)
chr8 (376-515)||(10927578-10927717)
chr8 (353-515)||(45521118-45521279)
chr8 (355-516)||(33401798-33401958)
chr8 (353-470)||(38922458-38922575)
chr8 (355-482)||(18373961-18374088)
chr8 (356-515)||(43032853-43033012)
chr8 (353-506)||(9860003-9860157)
chr8 (353-515)||(14846525-14846686)
chr8 (353-515)||(24837191-24837353)
chr8 (390-514)||(4479296-4479419)
chr8 (367-514)||(7673657-7673801)
chr8 (380-469)||(20240546-20240635)
chr8 (380-469)||(20252432-20252521)
chr8 (376-477)||(35496292-35496392)
chr8 (353-482)||(43027254-43027383)
chr8 (354-509)||(68103-68258)
chr8 (376-515)||(2209755-2209894)
chr8 (353-487)||(10535431-10535564)
chr8 (376-509)||(11785888-11786020)
chr8 (377-469)||(13358995-13359087)
chr8 (353-515)||(24938561-24938723)
chr8 (414-515)||(16291202-16291303)
chr8 (353-466)||(34846763-34846875)
chr8 (376-515)||(2964048-2964187)
chr8 (353-456)||(6940507-6940610)
chr8 (388-487)||(22958754-22958853)
chr8 (376-487)||(43349343-43349454)
chr8 (353-515)||(8997543-8997705)
chr8 (367-469)||(17981404-17981506)
chr8 (424-509)||(13357961-13358046)
chr8 (353-454)||(22810029-22810129)
chr8 (435-487)||(3692864-3692916)
chr8 (431-487)||(23895595-23895651)
chr8 (387-515)||(36662388-36662515)
chr8 (353-515)||(583763-583923)
chr8 (355-481)||(44031468-44031599)
chr8 (403-481)||(6042820-6042898)
chr8 (376-476)||(16893909-16894009)
chr8 (416-515)||(36914432-36914531)
chr8 (429-475)||(8586978-8587024)
chr8 (353-423)||(9395909-9395979)
[»] scaffold0002 (3 HSPs)
scaffold0002 (367-515)||(319384-319532)
scaffold0002 (376-515)||(541-680)
scaffold0002 (380-449)||(412091-412160)
[»] scaffold0011 (2 HSPs)
scaffold0011 (354-514)||(186467-186626)
scaffold0011 (353-516)||(224265-224428)
[»] scaffold0016 (1 HSPs)
scaffold0016 (394-515)||(8700-8821)
[»] scaffold0005 (4 HSPs)
scaffold0005 (376-481)||(271107-271212)
scaffold0005 (381-481)||(249338-249438)
scaffold0005 (438-509)||(219402-219473)
scaffold0005 (425-515)||(250024-250114)
[»] scaffold0291 (1 HSPs)
scaffold0291 (403-515)||(6853-6965)
[»] scaffold0029 (1 HSPs)
scaffold0029 (353-481)||(40992-41120)
[»] scaffold0086 (1 HSPs)
scaffold0086 (391-482)||(26169-26260)
[»] scaffold0006 (1 HSPs)
scaffold0006 (353-481)||(68465-68590)
[»] scaffold0376 (1 HSPs)
scaffold0376 (376-516)||(12641-12781)
[»] scaffold0316 (1 HSPs)
scaffold0316 (376-515)||(1613-1752)
[»] scaffold0004 (2 HSPs)
scaffold0004 (388-508)||(7841-7961)
scaffold0004 (367-490)||(95005-95126)
[»] scaffold0384 (1 HSPs)
scaffold0384 (376-506)||(5944-6073)
[»] scaffold0050 (1 HSPs)
scaffold0050 (371-481)||(72599-72708)
[»] scaffold0009 (2 HSPs)
scaffold0009 (387-516)||(42830-42959)
scaffold0009 (375-448)||(9406-9479)
[»] scaffold0155 (1 HSPs)
scaffold0155 (429-514)||(19279-19364)
[»] scaffold0079 (1 HSPs)
scaffold0079 (381-462)||(8151-8231)
[»] scaffold0209 (1 HSPs)
scaffold0209 (353-515)||(12523-12683)
[»] scaffold0010 (1 HSPs)
scaffold0010 (416-515)||(155710-155809)
[»] scaffold0223 (1 HSPs)
scaffold0223 (377-487)||(16851-16961)
[»] scaffold0001 (1 HSPs)
scaffold0001 (429-515)||(65151-65237)
[»] scaffold0024 (1 HSPs)
scaffold0024 (416-509)||(149396-149489)
[»] scaffold0341 (1 HSPs)
scaffold0341 (367-479)||(18594-18706)
[»] scaffold0332 (1 HSPs)
scaffold0332 (354-423)||(15280-15349)


Alignment Details
Target: chr7 (Bit Score: 780; Significance: 0; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 780; E-Value: 0
Query Start/End: Original strand, 22 - 987
Target Start/End: Original strand, 37514540 - 37515500
Alignment:
Q  22 ggaagcaggtttgatgaagagatggagaatattttatgcataatgtacaattatattttcaaacaaagatgtaccaacaacatttaaaaatatgtactaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  37514540 ggaagcaggtttgatgaagagatggagaatattttatgcataatgtacaattatattttcaaacaaagatgtactaacaccatttaaaaatacgtactaa 37514639  T
Q  122 catgtttatataacacgctctttactttaggaaacgtattcacatactccgtgcgatcttaaatataaacaaaagtttaatataattttatttaaatttc 221  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37514640 catgtttatataacacgctctttactttaggaaacatattcacatactccatgcgatcttaaatataaacaaaagtttaatataattttatttaaatttc 37514739  T
Q  222 aaccaaatacattttagcttttgttagctagattgttttgagtagacattgaaagcttcattcaatcattaattacgaagttaatatatcaatttatcaa 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37514740 aaccaaatacattttagcttttgttagctagattgttttgagtagacattgaaagcttcattcaatcattaattacgaagttaatatatcaatttatcaa 37514839  T
Q  322 cacaactaaaatgaccatnnnnnnnnnnnnnccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgat 421  Q
    ||||||||||||||||||             ||||||||||||  || |||||||||| ||||| |||||||||| || | ||||||||| |||||||||    
T  37514840 cacaactaaaatgaccataaaaaaaaaaa--ccaagttgtttggacttcaatgacaagtagctccttccaaggacatacccggggaatactgggttcgat 37514937  T
Q  422 tttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagtnnnnn 521  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||||||||||| || |||||||||||||||||         
T  37514938 tttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgttcaccattagtgggtcggaaaccggtgtgaaagtaaaaa 37515037  T
Q  522 nnnnntaaccataaaactgaacatgggaacaacagaatattaagatctcaacataagaaatcattataatcttatatatatgaccaataaaaccaaatta 621  Q
         | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37515038 aaa--tgaccataaaactgaacatgggaacaacagaatattaagatctcaacataagaaatcattataatcttatatatatgaccaataaaaccaaatta 37515135  T
Q  622 ttctccttagtatagttaccatcacgctttccaatttcaattggataagctgacaggaaaaatatatacatataaacagaacatatatcattatagacct 721  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37515136 ttctccttagtatagttaccatcacgctttccaatttcaattggataagctgacaggaaaaatatatacatataaacagaacatatatcattatagacct 37515235  T
Q  722 tatttttcaatccaatccactcaaaaacgaatattagacacctaacacattgaaaatgaaaaccaccaacgaatgttcacactatacatcttaacctctt 821  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37515236 tatttttcaatccaatccactcaaaaacgaatattagacacctaacacattgaaaatgaaaaccaccaacgaatgttcacactatacatcttaacctctt 37515335  T
Q  822 ttcaaggaactagtttttccaacatttgatgtagttctaatcctcttcttagcttgtacaataaaatctgaaaaatggtcattatgattttccattcttg 921  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37515336 ttcaaggaactagtttttccaacatttgatgtagttctaatcctcttcttagcttgtacaataaaatctgaaaaatggtcattatgattttcca-tcttg 37515434  T
Q  922 ttaacataatttgcttcctctagaacatggttgttctg-cccttaccgacgtttgacaattgttcta 987  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  37515435 ttaacataatttgcttcctctagaacatggttgttctgccccttaccgacgtttgac-attgttcta 37515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 43862110 - 43861971
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||||| |||||||||| |||| ||||    
T  43862110 caaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggat 43862011  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||| |||||| || |||||||  ||||||||| |||||    
T  43862010 tagtcattcacctttggtggatcgaaaaccggtgcgaaag 43861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 43925460 - 43925622
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||  ||| |||||||||  |||||||||||||    
T  43925460 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgc 43925559  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| ||||||||||||| ||| ||| ||  |||||||||||||| ||||||||    
T  43925560 atgcctctacgcatgagctggattagttgtttacctttgatggatcagaaaccgatgtgaaag 43925622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 10048037 - 10047875
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||| ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  10048037 ccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 10047938  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |  |||||||||| |||| | ||||||||| ||||||| |||| || |||||||||| |||||    
T  10047937 aggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 47341824 - 47341986
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||||||||||||||||| | ||||||||||| ||||||||  ||| |||||||||  |||| ||||||||    
T  47341824 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgc 47341923  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||||| ||||| ||||||||||||| |||| || |||| ||||| |||||    
T  47341924 atgcctctacgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaaag 47341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 48804631 - 48804793
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||  ||  |||||||||  |||| ||||||||    
T  48804631 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgc 48804730  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| ||||||||||| ||||||| |||| || |||||||||| |||||    
T  48804731 atgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 1605889 - 1606051
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||| | || ||||||| |||||||||| ||| |||||||||| |||| |||||| |    
T  1605889 ccaagttgtttggactccaatgacaaggagctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcac 1605988  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||| ||  |||| ||||||||||  |||| || ||||||| |||||||||| |||||    
T  1605989 atgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaaag 1606051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 27028227 - 27028389
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||  || |||||||||||||||||| ||||| ||||| |||||| |||||||||| ||| |||||||||  |||| ||||||||    
T  27028227 ccaagttgtttggactccggtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgc 27028326  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||| || ||||||||||||||| ||||| || |||| || |||||||||| |||||    
T  27028327 atgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 27028389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 376 - 516
Target Start/End: Original strand, 3353396 - 3353535
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||||||  |||||||||||| ||||||| |||| |||||| |||| || |||||| ||||| |||||||||| ||||||||||||||| ||||    
T  3353396 caaggagctcattataaggacgtatctagggaatatcgggatcgattctcag-ggaaacaacatttggccagtgcgcatgcctctacgcacgagccggat 3353494  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    ||||||| |||| ||  ||||||||||||||||| ||||||    
T  3353495 tagtcgtccacctttgatggatcagaaaccggtgcgaaagt 3353535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 507
Target Start/End: Original strand, 22973915 - 22974069
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| |||| | |||||||| |||||||||||||   |||||||||||||||||||| |||| |||||||||| |||| ||||| ||    
T  22973915 ccaagttgtttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgc 22974014  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccgg 507  Q
    || | |||||||| ||||  |||||||||| |||| || |||| |||||||||||    
T  22974015 atgcgtctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccgg 22974069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 22993528 - 22993366
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | |||||||| |||||||||||   ||  ||||||||| |||| ||||| ||    
T  22993528 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgc 22993429  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||| | |||||||||| ||||| || |||| ||||||||||||| |||||    
T  22993428 atgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaag 22993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 34659174 - 34659336
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||| ||| ||| | |||||||||||||||||||| |||  |||||||||| |||  ||||||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgc 34659273  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||||| ||||||||||  ||||||| |||  ||  ||||||||| |||||    
T  34659274 atgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaag 34659336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 43346940 - 43346778
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||||| ||| |||  |||||||||  |||| | ||||||    
T  43346940 ccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgc 43346841  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||| |||||| |||||||||| ||| | || |||| || |||||| ||| |||||    
T  43346840 atgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaag 43346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 36619392 - 36619253
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||| ||| || ||||||||||| |||||||||||||||||||||  ||| |||||||||  |||  ||||| |||| |||||||||| |||| ||||    
T  36619392 caaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggat 36619293  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| ||||||| |||| ||| ||||| |||||||||    
T  36619292 tagtcgtccaccattggtgggtcaaaaaccagtgtgaaag 36619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 495
Target Start/End: Complemental strand, 4195363 - 4195221
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| | ||||||||||||| ||||||||||| ||||||||| |||  |||||||| |||||  |||||||    
T  4195363 ccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgc 4195264  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtgg 495  Q
    || |||||||||| |||| ||||||| ||| ||||||| ||||    
T  4195263 atgcctctacgcatgagccggattagccgtccaccattggtgg 4195221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 17748543 - 17748409
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||| ||||  ||||||||||||||  ||||||||||||||||||||  ||| |||||||||| |||| ||||||||    
T  17748543 ccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgc 17748444  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||||| |||||| ||||||||||| ||||    
T  17748443 atgcctctacgtacgagccggattagtcgtccacc 17748409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 367 - 509
Target Start/End: Original strand, 18785631 - 18785773
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||| ||||| ||||||||||||| | ||||||||||||||||||||   || |||||||||  |||| |||||||||| ||||||||||     
T  18785631 ctccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcat 18785730  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||||||||||||||  | |||| || ||||||||||    
T  18785731 gaactggattagtcgttcacctctggtgggtcggaaaccggtg 18785773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 42210409 - 42210299
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||||||||| | |||||||||| |||||||  |||||  |||||||||||| |||||||||| |||||||||||    
T  42210409 ctccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcac 42210310  T
Q  467 gagctggatta 477  Q
    |||| ||||||    
T  42210309 gagccggatta 42210299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 376 - 509
Target Start/End: Original strand, 13095829 - 13095962
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| || |||||||||| | |||||||||||||||| |||  ||| |||||||||  |||| |||||||||| |||||||||| |||| ||||    
T  13095829 caaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggat 13095928  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||||| ||||| || |||| || ||||||||||    
T  13095929 tagtcgctcacctttggtgggtcggaaaccggtg 13095962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 367 - 508
Target Start/End: Original strand, 21530710 - 21530851
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||| ||||| ||||  ||| |||||||||  ||||||||||| ||| |||||||||||    
T  21530710 ctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgcac 21530809  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggt 508  Q
    |||| | |||| ||| ||||| || |||| || |||||||||    
T  21530810 gagccgaattaatcgctcacctttggtgggtcggaaaccggt 21530851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 454
Target Start/End: Complemental strand, 22268190 - 22268089
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||||||||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||| ||||| ||||||||    
T  22268190 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgcgc 22268091  T
Q  453 at 454  Q
    ||    
T  22268090 at 22268089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 354 - 482
Target Start/End: Original strand, 1797409 - 1797537
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    ||||||| |||  ||||| || |||||||||| ||||||||||||||| | ||||||||||||||||||  ||| || ||||||| |||| |||||||||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgca 1797508  T
Q  454 tacctctacgcacgagctggattagtcgt 482  Q
    |  |||||||||||||| ||| |||||||    
T  1797509 tgtctctacgcacgagccggactagtcgt 1797537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 367 - 495
Target Start/End: Original strand, 16802085 - 16802213
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || ||| |||||| ||||||||||||| | |||||||||||| ||||||| | ||  ||||||||| |||| ||||||| || |||||||||||    
T  16802085 ctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcac 16802184  T
Q  467 gagctggattagtcgttcaccattagtgg 495  Q
    |||| |||||||||| |||||||| ||||    
T  16802185 gagccggattagtcgctcaccattggtgg 16802213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 387 - 515
Target Start/End: Complemental strand, 38578994 - 38578866
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||||||||| | |||||||| |||||||||||  ||| |||||||||| |||| |||||||||| |||||||||| |||| ||||||||||  |||    
T  38578994 ttccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 38578895  T
Q  487 cattagtggatcagaaaccggtgtgaaag 515  Q
    | || |||| || |||||||||| |||||    
T  38578894 ctttggtgggtcggaaaccggtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 45960163 - 45960008
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||| ||||| |  |||||||||| ||||||||||||||| ||||||||||| ||| ||||  ||  || ||||||  |||||||||||||    
T  45960163 ccaagttgtttgagctccagtagcaaggagctctttccaaggacgtatc-ggggaataccgagtttgattcccaagggcaacaacacttggtcagtgcgc 45960065  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||||||  ||| |||||||||| ||||| ||  |||||| ||||||||||    
T  45960064 atgcctctacgcataagccggattagtcgctcacctttgatggatcggaaaccggtg 45960008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 4706122 - 4705983
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||| ||||||||| || |||||  ||||||||||| || ||||||||||||| | || | ||||| | ||||||||||||||||||    
T  4706122 caaggagctccttccaatgacgtatctaggaaatacatggttcgatttttagggggaacaacgtttagccattacgcatgcttctacgcacgagctggat 4706023  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| |||| || || ||||  |||||| ||||||||    
T  4706022 tagtcgtccacctttggtagatcgaaaaccgatgtgaaag 4705983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 39474911 - 39475030
Alignment:
Q  377 aaggagctcattccaaggacgtatctgggga-ataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||||| |||||| |||||||| ||||  |||||||||||||||   |  |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  39474911 aaggagctctttccaaagacgtatccgggggtataccgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggat 39475010  T
Q  476 tagtcgttcaccattagtgg 495  Q
    ||||||| |||| |||||||    
T  39475011 tagtcgtccacctttagtgg 39475030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 5039579 - 5039423
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| |||||  || ||||  ||||||||||| ||||||||   ||  ||||||||  ||||||||||| |    
T  5039579 ccaagttgtttgggctccagtggcaaggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgcac 5039480  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||||||||||| |||| |||||||||| ||||| || |||||||  |||||||||    
T  5039479 atacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtg 5039423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 353 - 490
Target Start/End: Complemental strand, 4228912 - 4228778
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  |||||  | |||||||||| ||||||||||||||| | |||||||| |||||||||| ||   |||||||||||||| |||||| |    
T  4228912 ccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttcca---ggaacaacgtttggccagtgcac 4228816  T
Q  453 atacctctacgcacgagctggattagtcgttcaccatt 490  Q
    || || ||||||| |||| ||||||||||  |||||||    
T  4228815 atgcccctacgcatgagccggattagtcgcccaccatt 4228778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 367 - 509
Target Start/End: Original strand, 14535253 - 14535395
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    |||||||| ||| || ||| |||||||||||||    ||||||||||||||  |||||||| | |||||||  |||| ||||| |||| |||||||||||    
T  14535253 ctccaatggcaaagaactccttccaaggacgtactccgggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcac 14535352  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||||||||||||||  |||||||  ||| |||||||| ||||    
T  14535353 gagctggattagtcgcccaccattgatgggtcagaaactggtg 14535395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 353 - 514
Target Start/End: Complemental strand, 26423448 - 26423288
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||| | ||| ||||||||||||| |   ||||||||||||||||||  ||| || ||||||| |||| |||||| |    
T  26423448 ccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcac 26423349  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
     | |||||||||||||||  ||||||||||||||| || |||| || |||||||||| ||||    
T  26423348 ctgcctctacgcacgagccagattagtcgttcacctttggtgg-tcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 353 - 514
Target Start/End: Complemental strand, 27875248 - 27875088
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||| ||||| ||||||| |||||||||||||||||||| |||||||  ||| ||||| |||  |||| |||||| |    
T  27875248 ccaagttgtttgggctccagtggcaagtagctccttccaag-acgtatctggggaataccggattcgattcccagggggaataacacttggccagtgcac 27875150  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    || |||||||||| |||  | ||||||||| |||| ||||||| ||  ||||||||| ||||    
T  27875149 atgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 44336868 - 44336957
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgag 469  Q
    ||||||||||||||||||||||| ||||||| || ||||||||| |||    || |||||||||||||||||||| ||||||||||||||    
T  44336868 gagctcattccaaggacgtatctagggaatatcgagttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgcacgag 44336957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 355 - 505
Target Start/End: Original strand, 23658130 - 23658279
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| || |||||||||| ||| ||||||||| |  ||||||| |  ||||||||| ||| |||||||||| |||| ||||| ||||    
T  23658130 aagttgtttgggctccagtggcaaggagctccttc-aaggacgtacccagggaatatccagttcgatttccagggggaacaacgcttggccagtgtgcat 23658228  T
Q  455 acctctacgcacgagctggattagtcgttcaccattagtggatcagaaacc 505  Q
     ||||||| ||||||| ||||||||||| || | || |||| |||||||||    
T  23658229 gcctctacacacgagccggattagtcgtccatctttggtgggtcagaaacc 23658279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 354 - 515
Target Start/End: Complemental strand, 5069975 - 5069814
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||||| || |||||||||  ||| ||||||||| | ||| ||||||||||||||||| |||  ||||||||| || |  |||| |||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgca 5069876  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    | ||||||||||| ||| ||||||||||  |||| || |||| || ||||||| || |||||    
T  5069875 tgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 390 - 515
Target Start/End: Complemental strand, 48244480 - 48244355
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    ||||||||||| ||||||||||||||||| ||||  |  |||||||| | ||| ||||||||  | |||||||||| |||| |||||||||| ||||| |    
T  48244480 caaggacgtatttggggaataccgggttcaatttctaaggggaacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcacctt 48244381  T
Q  490 tagtggatcagaaaccggtgtgaaag 515  Q
    | |||||||  ||||||||| |||||    
T  48244380 tggtggatcgaaaaccggtgcgaaag 48244355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 403 - 516
Target Start/End: Original strand, 3603351 - 3603468
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttgg----tcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatc 498  Q
    |||||||||||||||||||| |  | |||||||||||||||    ||||||||||| ||||||||||||||| |||||| ||||||||  || |||| ||    
T  3603351 ggggaataccgggttcgattctttgggggaacaacgtttggccggtcagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtc 3603450  T
Q  499 agaaaccggtgtgaaagt 516  Q
     |||| ||||| ||||||    
T  3603451 ggaaatcggtgcgaaagt 3603468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 355 - 479
Target Start/End: Original strand, 42032046 - 42032170
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| |  |||| ||||| ||||||||||||| | |||||||||| |||||||||  ||  ||||||||||||||| |||||| |||    
T  42032046 aagttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacat 42032145  T
Q  455 acctctacgcacgagctggattagt 479  Q
    || |||||||| |||| | ||||||    
T  42032146 acatctacgcatgagccgaattagt 42032170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 404 - 482
Target Start/End: Original strand, 30827291 - 30827369
Alignment:
Q  404 gggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgt 482  Q
    ||||||||| |||||||||||||| | |||||||  |||| |||| ||||| ||||||||||||||| |||||||||||    
T  30827291 gggaataccaggttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgt 30827369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 353 - 461
Target Start/End: Original strand, 14537814 - 14537922
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||   |||||||||||| |||||| ||| ||  |||| |||||||  |||||||||||  || || ||||||||||||||||||    
T  14537814 ccaagttgtttgggctcccgcgacaaggagctccttccaatgacatacttgggaaataccgaattcgattttcaagggaaataacgtttggtcagtgcgc 14537913  T
Q  453 atacctcta 461  Q
    |||||||||    
T  14537914 atacctcta 14537922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 456 - 515
Target Start/End: Original strand, 32768988 - 32769047
Alignment:
Q  456 cctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||||||||||  |||||||||||||||| || ||||||| ||||||||||||||||    
T  32768988 cctctacgcacgagtcggattagtcgttcacctttggtggatcggaaaccggtgtgaaag 32769047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 14650265 - 14650399
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||| | || ||||| |||||||||||| |||  ||||||| | |||  ||||||      
T  14650265 ccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcat 14650364  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||||||| |||| || ||||||| |||||    
T  14650365 atgcctctacgcatgagccgggttagtcgctcacc 14650399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 24969484 - 24969377
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||||| || |||||||||  || |||||||||||||||  ||||||||||||||||| ||  |||||||||  |||| ||||||||     
T  24969484 caagttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgatttcca--gggaacaacacttggccagtgcgcg 24969387  T
Q  454 tacctctacg 463  Q
    | ||||||||    
T  24969386 tgcctctacg 24969377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 482
Target Start/End: Complemental strand, 4973271 - 4973142
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||||||||||||  |||||||||| |||  |||||||| |||||||||||   |  ||||| |||  |||  || |||||    
T  4973271 ccaagttgtttgggctccactgacaaggagcttcttccaaggacttattcggggaatatcgggttcgattcctacggggaataacacttgaccaatgcgc 4973172  T
Q  453 atacctctacgcacgagctggattagtcgt 482  Q
    || |||||||| |||||| |||||||||||    
T  4973171 atgcctctacgtacgagccggattagtcgt 4973142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 21190914 - 21190825
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgag 469  Q
    |||||| |||||||||| |||| ||||||||||||||||||||   ||  ||| ||||| ||||  ||||||||| ||||||||||||||    
T  21190914 gagctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgag 21190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 354 - 515
Target Start/End: Original strand, 29151889 - 29152050
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||| | |||||| ||| || || || ||||||| ||| ||||||||||||||||||  |||   ||||||||||||  |||||||||    
T  29151889 caagttgtttgggctctagtgacaatgagttcctttcatggacgtacctgaggaataccgggttcgattcccaggaagaacaacgtttgaccagtgcgca 29151988  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    | ||||||| ||||| | |||||| ||||  ||||||  ||| || ||||||| || |||||    
T  29151989 tgcctctacacacgatccggattaatcgtctaccattgatgggtcggaaaccgatgcgaaag 29152050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 34127781 - 34127712
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||| |||  |||||||| |||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  34127781 ccaagttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggttcgatt 34127712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 9685691 - 9685771
Alignment:
Q  357 gttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaac 437  Q
    ||||||||  ||||| || |||||||||| ||||||| ||||||| |||||||| ||||||||||| ||||  ||||||||    
T  9685691 gttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 9685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 403 - 515
Target Start/End: Complemental strand, 10317856 - 10317745
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    ||||||||||||||||||||  ||| ||||| |||  |||||||||||| || |||||| |||  |||  ||||||||| ||||| || ||||||| |||    
T  10317856 ggggaataccgggttcgattcccagggggaataacacttggtcagtgcgtatgcctctatgcataagc-agattagtcgctcacctttggtggatcggaa 10317758  T
Q  503 accggtgtgaaag 515  Q
    ||||||| |||||    
T  10317757 accggtgcgaaag 10317745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 403 - 479
Target Start/End: Complemental strand, 49142780 - 49142704
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    ||||||||||||||||||||   || |||||||||| || | |||||| ||| ||||||||||||||| ||||||||    
T  49142780 ggggaataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgcacgagccggattagt 49142704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 380 - 479
Target Start/End: Original strand, 365115 - 365214
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||  ||||||| | ||||||||||||||||||  |||  ||||||||| ||  ||||||||||| |||||||||| ||||  |||||||    
T  365115 gagctccttccaaaaacgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatgagcctgattagt 365214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 368 - 487
Target Start/End: Complemental strand, 7774528 - 7774409
Alignment:
Q  368 tccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacg 467  Q
    |||||||| |||||||||||| ||||||||||||| | ||||||  |||| |||| | || || ||||||  |||| |||| || || || ||||| |||    
T  7774528 tccaatgataaggagctcatttcaaggacgtatctagagaatacttggtttgattcttaggggaaacaacccttggccagtacgtatgccgctacgtacg 7774429  T
Q  468 agctggattagtcgttcacc 487  Q
    || |||||||||||| ||||    
T  7774428 agttggattagtcgtacacc 7774409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 22573811 - 22573889
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgt 482  Q
    |||||||| |||||||||||||||| ||||||||| ||||  |||||||||| ||| |||||| |||| |||||| ||||    
T  22573811 ggggaatatcgggttcgattttcag-gggaacaacatttgaccagtgcgcatgcctttacgcatgagccggattaatcgt 22573889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 29805598 - 29805484
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| ||  |||||| || || |||||||||||  || |||||||| ||||||||   | |||||||||||||||||||||||||||    
T  29805598 aagttgtttggactccagtggtaaggagatcctttcaaggacgtattcggagaataccgagttcgattcata-tgggaacaacgtttggtcagtgcgcat 29805500  T
Q  455 acctctacgcacgagc 470  Q
      ||||||||| ||||    
T  29805499 gtctctacgcatgagc 29805484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 429 - 516
Target Start/End: Original strand, 41945497 - 41945584
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    ||||| |||| |||| |||||||||| ||||||||||||||| ||||||||||| |||| || |||  || |||| ||||| ||||||    
T  41945497 gggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaagt 41945584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 507
Target Start/End: Original strand, 45447941 - 45448072
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | | | |||||| |||||||||| ||| | |||||||| ||||  ||||||||| ||||||| ||| ||   |||    
T  45447941 caaggagctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttggctagtgcgcatccctctacacactagtcagat 45448040  T
Q  476 tagtcgttcaccattagtggatcagaaaccgg 507  Q
    |||||   |||| ||||||| || ||||||||    
T  45448041 tagtcacccacctttagtgggtcggaaaccgg 45448072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 39420809 - 39420914
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| || |||||| ||| | |||||||||||| ||||| |  ||  |||||||||| |||| |||||||| | |||||||||| |||| ||||    
T  39420809 caaggagctcctttcaaggaggtacccggggaataccgg-ttcgaatcccaaagggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggat 39420907  T
Q  476 tagtcgt 482  Q
    |||||||    
T  39420908 tagtcgt 39420914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 9813924 - 9814049
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| ||||||| | ||| ||| |||  ||||| |||||||||| ||||||||||  |||||| |||||||| ||| ||||| ||    
T  9813924 ccaagttgattgggctccattgacaagcatctctttctaagatcgtatttggggaatactgggttcgattcccagtgg-aacaacgtatggccagtgtgc 9814022  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||| |  |||||||||||||||||||    
T  9814023 atgcctat--gcacgagctggattagtcg 9814049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 470
Target Start/End: Complemental strand, 19914863 - 19914747
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| ||  ||||||| ||||||||||  ||   ||||||||| |||| || |||||    
T  19914863 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattccca-aaggaacaacgcttggccaatgcgc 19914765  T
Q  453 atacctctacgcacgagc 470  Q
    || |||||||||| ||||    
T  19914764 atgcctctacgcatgagc 19914747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 431 - 515
Target Start/End: Original strand, 48551883 - 48551967
Alignment:
Q  431 gaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||| |||| || ||||||| |||||||| | |||| ||||||||||| |||| ||  |||||| |||||||||| |||||    
T  48551883 gaacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaag 48551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 505
Target Start/End: Complemental strand, 45697305 - 45697199
Alignment:
Q  398 tatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggat 497  Q
    |||| |||||||| | | ||||||| |||| |||||||||  ||| ||||||||||| |||||||||| ||| ||| |||||||| |||| || |||| |    
T  45697305 tatccggggaatatcagattcgattctcag-gggaacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggt 45697207  T
Q  498 cagaaacc 505  Q
    | ||||||    
T  45697206 cggaaacc 45697199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 45853658 - 45853591
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttgg 443  Q
    |||||| ||| |||||||||||||| ||| |||| ||| ||||||||| |||||| ||||||| ||||    
T  45853658 caaggaactccttccaaggacgtatttggagaatgccgagttcgatttccagtggaaacaacgattgg 45853591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 490
Target Start/End: Complemental strand, 20247307 - 20247194
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||| ||||| ||||||||| ||| || ||||||||| ||||||||| |||  |||||||||| |||| |||| | |||  ||||||| ||| |  ||||    
T  20247307 caagaagctccttccaaggatgta-cttgggaataccaggttcgattctcatggggaacaacgcttgggcagtacacatgtctctacgtacgggtcggat 20247209  T
Q  476 tagtcgttcaccatt 490  Q
    ||||||| |||||||    
T  20247208 tagtcgtccaccatt 20247194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 390 - 508
Target Start/End: Complemental strand, 28396284 - 28396166
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    |||| ||||||| ||| |||| ||||||| ||| |||| |||||||||| || |   |||||||| ||| |||||| |||| |||||||||||  ||| |    
T  28396284 caagaacgtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctt 28396185  T
Q  490 tagtggatcagaaaccggt 508  Q
    | |||| || |||||||||    
T  28396184 tggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 429 - 515
Target Start/End: Original strand, 28744186 - 28744272
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||| | |||| |||| |||||||||||||  |||||| ||||||||||| |||| || |||| || ||||| |||| |||||    
T  28744186 gggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 28744272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 446 - 495
Target Start/End: Complemental strand, 24983487 - 24983438
Alignment:
Q  446 agtgcgcatacctctacgcacgagctggattagtcgttcaccattagtgg 495  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||| ||||    
T  24983487 agtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgg 24983438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 454
Target Start/End: Complemental strand, 48224867 - 48224791
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    |||||| || |||||||||||||||  ||||||| || |||| |||| || ||||||||||| ||| |||||||||||    
T  48224867 aaggagttctttccaaggacgtatccagggaatatcgagttcaatttcca-tgggaacaacgcttgatcagtgcgcat 48224791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 3e-41; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 53599010 - 53599172
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||  |||  |||||||||||||| ||||||||    
T  53599010 ccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgc 53599109  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||| ||||||||| |||||||||| |||||||||| |||||    
T  53599110 atgcctctacgcatgagccggattaatcgttcacctttagtggatcggaaaccggtgcgaaag 53599172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 29895737 - 29895899
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  29895737 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 29895836  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| ||||||||||| ||||||| |||| || |||||||||| |||||    
T  29895837 atgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaag 29895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 20128282 - 20128421
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||| || ||||||||||||||| ||||||||| |||||||||| |||| |||||||| | |||| |||||||||| ||| |||||||||||| |||    
T  20128282 caaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagat 20128381  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| ||||||| |||| ||||||||||||| |||||    
T  20128382 tagtcgtccaccattggtgggtcagaaaccggtgcgaaag 20128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 47078431 - 47078570
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||  ||| |||||||||| |||| |||||| ||| ||||||||||||||| ||||    
T  47078431 caaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggat 47078530  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||| |||||||| |||| || |||||| ||| |||||    
T  47078531 tagtcgctcaccattggtgggtcggaaaccagtgcgaaag 47078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 38165977 - 38166139
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||||| ||||||||| ||||| ||||  ||| |||||||||| |||| ||||||||    
T  38165977 ccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgc 38166076  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  |||||||||||||| ||||||||||  |||| || |||| || |||||||||| |||||    
T  38166077 atggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 353 - 488
Target Start/End: Original strand, 1446776 - 1446911
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  1446776 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 1446875  T
Q  453 atacctctacgcacgagctggattagtcgttcacca 488  Q
    || |||||||||| |||| ||||||||||| |||||    
T  1446876 atgcctctacgcatgagccggattagtcgtccacca 1446911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 14123966 - 14124129
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  |||||||| |||| ||||| ||||||| |||||  || |||||||| |||||||||  ||| ||||||||| ||||| ||||||||    
T  14123966 ccaagttgtttgggctccaatggcaagaagctccttccaagaacgtacttgaggaataccaggttcgattcccagggggaacaacatttggccagtgcgc 14124065  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    || ||||||| ||||||| |||||||||| |||||||| |||| |  |||||||||| ||||||    
T  14124066 atgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaagt 14124129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 2559257 - 2559419
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||| |||||| ||||||||||||| |||||||||||||| ||||||||  ||  ||||||||| |||| ||||||||    
T  2559257 ccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgc 2559356  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||| ||| |||||| |||| |||| || |||| || |||||||||| |||||    
T  2559357 atgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaag 2559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 387 - 509
Target Start/End: Complemental strand, 3159596 - 3159474
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||||||||||| || ||||||||||||||| || ||| |||||||||| |||| |||||||||| |||||||||||||||  ||||||||| ||||    
T  3159596 ttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcac 3159497  T
Q  487 cattagtggatcagaaaccggtg 509  Q
    |||| |||| || ||||||||||    
T  3159496 cattggtgggtcggaaaccggtg 3159474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 355 - 481
Target Start/End: Complemental strand, 5473007 - 5472881
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| || ||||||||||||| |||||||||||| |||||||||| |||| |||| |||| || ||||||| |||| ||||||||||    
T  5473007 aagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcat 5472908  T
Q  455 acctctacgcacgagctggattagtcg 481  Q
     ||||||||||||||| ||||||||||    
T  5472907 gcctctacgcacgagccggattagtcg 5472881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 376 - 514
Target Start/End: Original strand, 33647694 - 33647832
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| || |||||||||||||||||||||||||||||||||| ||| | |||||||| |||  |||||| ||| ||||||||||||| |  |||    
T  33647694 caaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacgaaccagat 33647793  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||||||||| | || ||||||| |||||||||| ||||    
T  33647794 tagtcgttcatctttggtggatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 36145353 - 36145214
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||  ||| || ||||||| ||| ||||||||||| ||||||| || |||| ||||    
T  36145353 caaggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggat 36145254  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| |||| ||  || ||| |||||||||| |||||    
T  36145253 tagtcgtccacctttgatgaatcggaaaccggtgcgaaag 36145214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 378 - 516
Target Start/End: Complemental strand, 42722713 - 42722575
Alignment:
Q  378 aggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||||||| ||||||||||||| | ||| |||||||||||| |||  |||  ||||||||| |||| |||||||||| |||||||||| |||| ||||||    
T  42722713 aggagctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatta 42722614  T
Q  478 gtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    |||||||||| ||||||| ||  ||||||||| ||||||    
T  42722613 gtcgttcacctttagtgggtcgaaaaccggtgcgaaagt 42722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 55920984 - 55921146
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||| | | ||||||||||||||||||||  ||| |||||||||  |||||||||||||    
T  55920984 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgc 55921083  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||| | |||| |||||| ||| ||||| || |||| || |||||||||| |||||    
T  55921084 atgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 55921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 8888995 - 8889134
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||   || |||||||||  |||| ||||||||||  ||||||||| |||| ||||    
T  8888995 caaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggat 8889094  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| |||| || |||| || ||||||||||| ||||    
T  8889095 tagtcgtccacctttggtgggtcggaaaccggtgtaaaag 8889134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 514
Target Start/End: Original strand, 13073488 - 13073649
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || ||| |||||| ||||||||||||| |||| |||||||| ||||||||  ||  |||||||| |||||| ||||||||    
T  13073488 ccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgcgc 13073587  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    ||||||||||||| || |  ||||||||||| ||| || |||| || |||||||||| ||||    
T  13073588 atacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 387 - 515
Target Start/End: Complemental strand, 7246773 - 7246645
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||||||||| | ||||||||| ||||||||||   ||||||||||||| |||| |||||||||| |||||||||| |||| ||||||||||  |||    
T  7246773 ttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 7246674  T
Q  487 cattagtggatcagaaaccggtgtgaaag 515  Q
    | || |||| || |||||||||| |||||    
T  7246673 ctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 15829649 - 15829812
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||||||||||||  || |||||||||||| || ||||| |  ||| ||||||||| || | ||||  |||| ||||||||    
T  15829649 ccaagttgtttgggctccagtgacaaggagcttctttcaaggacgtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtgcgc 15829748  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    || | |||| ||| |||| ||||||||| | ||||||| |||||||||||||||||| ||||||    
T  15829749 atgcttctaggcatgagccggattagtcctccaccattggtggatcagaaaccggtgcgaaagt 15829812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 24850764 - 24850626
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||||||||||||||||||| ||| |||||| | ||| ||| |||| |||||||||  |||  |||||||||| |||||||||| |||||||||    
T  24850764 caaggagctcattccaaggacgtatccgggaaataccagattcaattatcag-gggaacaacacttgaccagtgcgcatgcctctacgcatgagctggat 24850666  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || || | |||||||| |||||| ||||||| || |||||    
T  24850665 tattcatccaccattattggatcggaaaccgatgcgaaag 24850626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 377 - 516
Target Start/End: Complemental strand, 40272468 - 40272329
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||| |||||| || ||||| |||||||| |||||||||||| ||  |||||||||| |||| |||||||||| ||||||||||  ||  |||||    
T  40272468 aaggagctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggatt 40272369  T
Q  477 agtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
     ||||||||||||| |||| || |||||| |||| |||||    
T  40272368 tgtcgttcaccattggtgggtcggaaacccgtgtaaaagt 40272329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 6779161 - 6779295
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||  ||||||||||||| |||| |||||||||||||||||  ||| |||||||||   ||| ||||||||    
T  6779161 ccaagttgtttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgc 6779260  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||| ||| |||| ||||||||||| ||||    
T  6779261 atgcctctatgcatgagccggattagtcgtccacc 6779295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 24166400 - 24166562
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| |||||||||||||   ||||||||| ||||||||||  ||  || |||||||||||| ||||||||    
T  24166400 ccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgc 24166499  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||||||||  ||||||||   |||| ||  |||||| |||||||||| |||||    
T  24166500 atgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgcgaaag 24166562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 43458563 - 43458697
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||| |||||||||||||||||||| |||||||||| || |||||||  |||  |||| |||| |||| ||||||||    
T  43458563 ccaagttgcttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgc 43458662  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||||| |||||| ||||||||||| ||||    
T  43458663 atgcctctacggacgagccggattagtcgtccacc 43458697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 52950032 - 52950194
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||| |||||||||| |||||||||||  ||| |||||||||| |||| ||||||||    
T  52950032 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgc 52950131  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  |||||| || || |  |||||||||| |||| || |||| || ||||||| || |||||    
T  52950132 atgactctacacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaag 52950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 381 - 509
Target Start/End: Original strand, 21429279 - 21429407
Alignment:
Q  381 agctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtc 480  Q
    ||||| |||||| |||||||| | |||||| ||||||||||||| || ||||||||||||| | |||||||||| ||||||||||||||   || |||||    
T  21429279 agctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtc 21429378  T
Q  481 gttcaccattagtggatcagaaaccggtg 509  Q
    || |||| || |||| || ||||||||||    
T  21429379 gtccacctttggtgggtcggaaaccggtg 21429407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 354 - 514
Target Start/End: Complemental strand, 40781021 - 40780861
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||| ||  ||||| || |||||||||  ||  ||||||||||  ||  |||| ||||||||||| |||  |||||||||| ||||||||||||||    
T  40781021 caagttgtctgggctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgca 40780922  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    | |||||||||| |||| ||||||||||| |||| || |||| || |||||||||| ||||    
T  40780921 tgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 38168230 - 38168368
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | |||||||||| |||||||||   |   ||||||||| |||| |||||| ||| |||||||||| |||| ||||    
T  38168230 caaggagctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccggat 38168328  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||||| ||||||| |  |||||||||| |||||    
T  38168329 tagtcgttcacctttagtgggttggaaaccggtgcgaaag 38168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 481
Target Start/End: Complemental strand, 1940935 - 1940810
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||| | ||| |||| |||||||||||  ||| |||||||||| ||||   ||||||    
T  1940935 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgc 1940839  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||||||| ||||||||||    
T  1940838 atgcctctacgcacgagccggattagtcg 1940810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 3574607 - 3574473
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| || |||||||||| |||| |||  ||| | |||||||  |||| ||||||||    
T  3574607 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgcgc 3574508  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || ||||||||||||||  |||||||||| |||||    
T  3574507 atgcctctacgcacgagtcggattagtcgctcacc 3574473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 38075383 - 38075545
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  |||||  | ||||||| || ||||||||||||||  || ||||||||||||||||| |||| || ||||||| |||| ||||||||    
T  38075383 ccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgc 38075482  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| | |||| | || |||| || |||| || ||||||| || |||||    
T  38075483 atgcctctacgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaaag 38075545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 387 - 515
Target Start/End: Complemental strand, 15732575 - 15732447
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||||||||||| || |||||||||||||||||   |  |||||||||  |||| |||||| ||| |||||||||||| ||| ||||||||| |||     
T  15732575 ttccaaggacgtatccggagaataccgggttcgattcatatggggaacaacacttggccagtgcacatgcctctacgcacgggctagattagtcgctcat 15732476  T
Q  487 cattagtggatcagaaaccggtgtgaaag 515  Q
    | || ||||||| |||||||||| |||||    
T  15732475 ctttggtggatcggaaaccggtgcgaaag 15732447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 362 - 505
Target Start/End: Complemental strand, 36262917 - 36262776
Alignment:
Q  362 ttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctcta 461  Q
    |||| ||||| || |||| ||||| ||||||||||||| | || |||||||||||||||||  |||  ||||||||| |||| |||||| ||| ||||||    
T  36262917 ttgagctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccag--ggaacaacgcttggccagtgcacatgcctcta 36262820  T
Q  462 cgcacgagctggattagtcgttcaccattagtggatcagaaacc 505  Q
    ||||||||  ||||||||||  |||| || |||| |||||||||    
T  36262819 cgcacgagtcggattagtcgcccacctttggtgggtcagaaacc 36262776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 387 - 479
Target Start/End: Complemental strand, 48015200 - 48015108
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| |||||| | | ||||||||||||||||||  |||||||||||||| |||| |||||||||  ||||||||||||||| ||||||||    
T  48015200 ttccaaagacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 353 - 481
Target Start/End: Complemental strand, 49952307 - 49952179
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||||| ||  |||| || |||||||||| ||||||||||||||  ||| ||||   |||| |||||||||  | |||||||||||||||||||||    
T  49952307 ccaagttgttggagttccattggcaaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcgc 49952208  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    |  |||||||||| |||| ||||||||||    
T  49952207 acgcctctacgcatgagccggattagtcg 49952179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 27248378 - 27248538
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||| |||||| ||||||||||||||| |||||||||||||||||| |  |||  ||||||||| |||| ||  ||||    
T  27248378 ccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgc 27248475  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| ||||  |||||||||  |||| || || | |||||||| ||||||||||    
T  27248476 atgcctctacgcaggagccagattagtcgcccacctttggtaggtcagaaactggtgtgaaag 27248538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 15840081 - 15839968
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| |||||||||||||  |||||||||||||||||||||   ||   ||| ||||||||| |||||||||| ||||||||||     
T  15840081 ctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcctag-aagaataacgtttggccagtgcgcatgcctctacgcat 15839983  T
Q  467 gagctggattagtcg 481  Q
    |||| ||||||||||    
T  15839982 gagccggattagtcg 15839968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 41339556 - 41339395
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||| | || ||||||||||||||| |  ||  |||||||||| |||| ||||| |     
T  41339556 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgt 41339457  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||||  ||||||||||  ||||||| |  ||||| ||||||||| |||||    
T  41339456 atgcctctacgcacgagacggattagtcgcccaccattggcagatca-aaaccggtgcgaaag 41339395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 432 - 485
Target Start/End: Original strand, 23788426 - 23788479
Alignment:
Q  432 aacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttca 485  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  23788426 aacaacgtttagtcagtgcgcatgcctctacgcacgagctggattagtcgttca 23788479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 354 - 479
Target Start/End: Original strand, 29588687 - 29588812
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    ||||||| |||  ||||| || ||||||||||||||||| |||||  | ||| ||||||||||||||||  ||| || ||||| | ||||  ||||||||    
T  29588687 caagttgattgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgca 29588786  T
Q  454 tacctctacgcacgagctggattagt 479  Q
    | ||||||||||||||| ||||||||    
T  29588787 tgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 387 - 516
Target Start/End: Original strand, 43468331 - 43468460
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||| ||||| | ||||||||||||||||||||  ||| |||||||||| |||| |||||| |||  ||||||||| |||| ||||||||||  |||    
T  43468331 ttccaagaacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccac 43468430  T
Q  487 cattagtggatcagaaaccggtgtgaaagt 516  Q
    || | |||| || || ||||||| ||||||    
T  43468431 cagtggtgggtcggagaccggtgcgaaagt 43468460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 4736547 - 4736675
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||| ||||| || ||| |||||| || |||||| ||| | | |||||||||||||| ||| ||||||| |||||||||||| || || ||    
T  4736547 ccaagttgtttgagctccagtggcaatgagctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgc 4736646  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || |||||||| || ||| | ||||||||    
T  4736647 atgcctctacgtacaagccgaattagtcg 4736675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 381 - 481
Target Start/End: Original strand, 14567937 - 14568037
Alignment:
Q  381 agctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtc 480  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||| |||| | ||| |||| |||  |||||| ||||||||||||||||||  |||||||||    
T  14567937 agctccttctaaggacgtatttggggaataccaggttcgattctcagggagaataacgcttgaccagtgcacatacctctacgcacgagtcggattagtc 14568036  T
Q  481 g 481  Q
    |    
T  14568037 g 14568037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 367 - 503
Target Start/End: Complemental strand, 20532556 - 20532420
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || ||||| ||||||||||||| | || | || |||||||| ||||||||| |||  ||||||||| |||| |||||||||| ||||||||||     
T  20532556 ctccagtggcaaggtgctcattccaaggccatacccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcat 20532457  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaa 503  Q
    |||| |||| |||||  |||| || ||||||| ||||    
T  20532456 gagccggataagtcgcccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 41163043 - 41162959
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaac 437  Q
    |||||||| |||  ||||| ||||||||||||| ||||||||||||||| ||| ||||||| ||||||||| ||| |||||||||    
T  41163043 ccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaac 41162959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 481
Target Start/End: Complemental strand, 48317436 - 48317308
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||| ||||||||||||| |||||||  |   ||||| || ||||||||||||  ||||||||| |||||||||| |     
T  48317436 ccaagttgcttgggctccagtggcaaagagctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgtgt 48317337  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||||||| ||||||||||    
T  48317336 atgcctctacgcacgagccggattagtcg 48317308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 358 - 509
Target Start/End: Complemental strand, 295688 - 295538
Alignment:
Q  358 ttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacc 457  Q
    |||||||  ||||| || |||||| | | ||| ||||||||||| |||||||||| | |||||||  ||| || |||||||||||| |||||||||| ||    
T  295688 ttgtttgggctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattcccagagg-aacaacgtttggccagtgcgcatgcc 295590  T
Q  458 tctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||||||||| |  |||||||||| |||| || |||| |  ||||||||||    
T  295589 tctacgcacgaaccagattagtcgtccaccgttggtgggtttgaaaccggtg 295538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 49260809 - 49260698
Alignment:
Q  370 caatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgag 469  Q
    ||||| |||||| ||| ||||||||| ||||| ||||||||| |  ||| |||  ||  |||||||||| |||| |||||||||| ||||||||||||||    
T  49260809 caatggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgag 49260710  T
Q  470 ctggattagtcg 481  Q
    | ||||||||||    
T  49260709 ccggattagtcg 49260698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 20421747 - 20421840
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagc 470  Q
    |||||||||| || ||| ||||||||||||||||| | |||||||||| ||| |||||||||  |||| |||||||||| |||||||||| ||||    
T  20421747 caaggagctcctttcaaagacgtatctggggaata-ctggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagc 20421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 516
Target Start/End: Original strand, 30317233 - 30317346
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    |||||||| | ||||||||| |||| |||||||||| |||| |||| || || ||||||||||||||| | ||||||||  |||| || |||| || |||    
T  30317233 ggggaatatcaggttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaa 30317332  T
Q  503 accggtgtgaaagt 516  Q
    |||| |||||||||    
T  30317333 accgatgtgaaagt 30317346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 514
Target Start/End: Complemental strand, 6032800 - 6032643
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    ||||||| |||  ||||| || |||||||||| ||||||||||||| | |||||||||||||||| |||||||   |||   ||| |||  |||||| ||    
T  6032800 caagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaattttca---ggaggtacgcttgaccagtgctca 6032704  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    | |||||||| | |||| |||||||||||  ||| || |||| || |||||||||| ||||    
T  6032703 tgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 377 - 515
Target Start/End: Original strand, 10540990 - 10541127
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    |||||| |||||||||  ||||| ||  |||||| |||||||||||| ||| || ||||||| |||| ||||| |||| |||||||||||||||  ||||    
T  10540990 aaggagttcattccaaaaacgtacctaaggaatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgcacgagccagatt 10541089  T
Q  477 agtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    | |||  |||| ||  |||||| |||||||||| |||||    
T  10541090 aatcg-ccacctttgatggatcggaaaccggtgcgaaag 10541127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 26480110 - 26479948
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||| |||||  |||||||||||| |||||||| | |  ||||| |||  |||| |||| |||    
T  26480110 ccaagttgtttgggctccactggcaaggagctccttccaagtacgtacatggggaataccgagttcgattcttaaggggaataacacttggccagtacgc 26480011  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| | |||| |||| || ||||  || ||| ||||||| | ||||||    
T  26480010 atgcctctacgcatgagccgaattaatcgtccatcattgatgaatcggaaaccgatatgaaag 26479948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 9548723 - 9548812
Alignment:
Q  415 gttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaac 504  Q
    |||||||| ||| || |||||||| ||||| ||||||||| ||||| | ||||| || ||||||||||||||| || ||||||| |||||    
T  9548723 gttcgattctcaatgagaacaacgcttggttagtgcgcatgcctctgcacacgaactagattagtcgttcaccgttggtggatcggaaac 9548812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 31588634 - 31588798
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacg--tttggtcagtgc 450  Q
    ||||||||||||  || || || |||||||||| ||| ||||||||||  ||||||||  ||||| ||||  ||| || |||||||   |||| ||||||    
T  31588634 ccaagttgtttgggcttcagtgtcaaggagctcgttctaaggacgtattcggggaatattgggtttgattcccagaggaaacaacgctcttggccagtgc 31588733  T
Q  451 gcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||  ||||||||| |||| |||||||||| ||||  || ||||||| ||||||| || |||||    
T  31588734 gcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaaccgatgcgaaag 31588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 516
Target Start/End: Original strand, 45721086 - 45721199
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    |||||||||||||||| |||||||| || || || |||||| || ||||| | ||||||||||| ||  ||||||||||| |||| ||| ||| |  |||    
T  45721086 ggggaataccgggttccattttcaggggaaataatgtttggccactgcgcgtgcctctacgcacaagtcggattagtcgtccacctttaatgggttggaa 45721185  T
Q  503 accggtgtgaaagt 516  Q
    ||||||| ||||||    
T  45721186 accggtgcgaaagt 45721199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 13552068 - 13552148
Alignment:
Q  357 gttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaac 437  Q
    ||||||||  ||||| || |||||||||| ||||||| ||||||| |||||||| ||||||||||| ||||  ||||||||    
T  13552068 gttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 13552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 34667763 - 34667695
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgat 421  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||| | |||||||||||||||||||    
T  34667763 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgat 34667695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 14077983 - 14078058
Alignment:
Q  440 ttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||||||||  |||||||||||||  |||||||||   |||  |||||||||||||||||| ||||||||    
T  14077983 ttggtcagtgcgcatgtctctacgcacgagtcggattagtcacccacatttagtggatcagaaaccgatgtgaaag 14078058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 14597976 - 14597905
Alignment:
Q  438 gtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||| |||| ||  ||||||  |||||||||    
T  14597976 gtttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtg 14597905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 431 - 506
Target Start/End: Original strand, 50485971 - 50486046
Alignment:
Q  431 gaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccg 506  Q
    |||||||| |||| |||  ||||| ||||||||||||||| ||||||||||  |||||||||||| || |||||||    
T  50485971 gaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaaccg 50486046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 377 - 498
Target Start/End: Complemental strand, 1123928 - 1123806
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcg-catacctctacgcacgagctggat 475  Q
    ||||||||| || ||| || |||| ||| ||||| ||| ||||||| |||| |||||||||| ||| ||| || | |||||||||||||| || | ||||    
T  1123928 aaggagctcctttcaatgatgtatttggagaatatcggattcgattctcagagggaacaacgcttgatcaatgtgtcatacctctacgcatgacccggat 1123829  T
Q  476 tagtcgttcaccattagtggatc 498  Q
    || ||||||| |||| |||||||    
T  1123828 taatcgttcatcatttgtggatc 1123806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 14567261 - 14567351
Alignment:
Q  425 cagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||| ||| | |||||| |||||||||| ||||||||||||||| |||||||||| || || || |||| || |||| ||||| |||||    
T  14567261 cagtggaaaccatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 14567351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 449
Target Start/End: Original strand, 13436788 - 13436858
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtg 449  Q
    ||||||||| || ||||||||||   ||||||||||||||||||||  ||| |||||||||| ||||||||||    
T  13436788 aaggagctcctttcaaggacgtac--ggggaataccgggttcgattcccagagggaacaacgcttggtcagtg 13436858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 354 - 515
Target Start/End: Original strand, 14858662 - 14858822
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||| ||||| |||||| || ||| ||||||||| ||| | || |||||||||||||| ||  ||| |||| ||| | |||  |||||||||    
T  14858662 caagttgtttgagctccattgacaatgaactccttccaaggatgtacccggagaataccgggttcggttcccagggggatcaa-gcttgaccagtgcgca 14858760  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |  ||||||| |||||   ||||| |||| |||| ||  ||| ||||||||||||| |||||    
T  14858761 tgtctctacgtacgagtcagattattcgtccacctttgatgggtcagaaaccggtgcgaaag 14858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 27531818 - 27531749
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| |  |||||||||||||||||||    
T  27531818 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccagggaataccgggttcgatt 27531749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 515
Target Start/End: Original strand, 54946284 - 54946361
Alignment:
Q  438 gtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||||||| ||||| |||||||||| |||| ||||||||||  || |||| |||| || |||||||| |||||||    
T  54946284 gtttggtcagtccgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccggcgtgaaag 54946361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 481
Target Start/End: Complemental strand, 55005440 - 55005339
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| |||||| |||||||||||| |||||||  |||||||  ||| || ||||||| |||  || ||||||| ||||||||||| ||  ||||||||    
T  55005440 gagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtcggattagt 55005341  T
Q  480 cg 481  Q
    ||    
T  55005340 cg 55005339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 403 - 515
Target Start/End: Original strand, 16645118 - 16645230
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    |||||||||||||||||||||||||   |||||||| |||| ||||| |||| ||||||| || |||   |||||||||  ||||  | |||| || |||    
T  16645118 ggggaataccgggttcgattttcaggaagaacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaa 16645217  T
Q  503 accggtgtgaaag 515  Q
    ||||||| |||||    
T  16645218 accggtgcgaaag 16645230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 504
Target Start/End: Original strand, 3507296 - 3507371
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaac 504  Q
    |||||||||| ||||  ||||||| | ||||||| ||||||| ||||||||||| |||| || ||||||| |||||    
T  3507296 gggaacaacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttggtggatcggaaac 3507371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 515
Target Start/End: Original strand, 35359749 - 35359848
Alignment:
Q  416 ttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| |||| ||||||||||||||  |||||||||| |||| |||||  || |||||||||||  ||| ||  |||| || |||||||||| |||||    
T  35359749 ttcgattctcagggggaacaacgtttgaccagtgcgcatgcctcaacgcataagttggattagtcgcccactataggtgggtcggaaaccggtgcgaaag 35359848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 7741898 - 7742004
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| || |||| ||||||  | |||||| ||||||| | | |||| || ||||||| |||| |||||| ||| ||||||||||||| |  |||    
T  7741898 caaggagctcctttcaagtacgtattcgaggaatatcgggttccaatctcaggggtaacaacgcttggccagtgcacatgcctctacgcacgatccagat 7741997  T
Q  476 tagtcgt 482  Q
    |||||||    
T  7741998 tagtcgt 7742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 445 - 491
Target Start/End: Complemental strand, 8064867 - 8064821
Alignment:
Q  445 cagtgcgcatacctctacgcacgagctggattagtcgttcaccatta 491  Q
    |||||||||| |||||||||| |||| ||||||||||| ||||||||    
T  8064867 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccatta 8064821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 12703706 - 12703544
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||||||| || ||| |||||||||   | ||||||| | ||||||||| |||||||||||||| |||  ||||| |     
T  12703706 ccaagttgcttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgtgt 12703607  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  |||||||||  ||| ||||||||||  || | |||  ||||| ||||||| ||||||||    
T  12703606 atgtctctacgcataagccggattagtcgcccatctttaaaggatcggaaaccgatgtgaaag 12703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 378 - 488
Target Start/End: Complemental strand, 42722514 - 42722405
Alignment:
Q  378 aggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||||||| || ||| || ||| | ||||||||||||||| ||||  ||| |||||||||  |||  ||||||||||||||||| ||| |||  ||||||    
T  42722514 aggagctcctttcaaagatgtacccggggaataccgggtttgattcccag-gggaacaacacttgaccagtgcgcatacctctatgcatgagtcggatta 42722416  T
Q  478 gtcgttcacca 488  Q
    ||||| |||||    
T  42722415 gtcgtccacca 42722405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 429 - 515
Target Start/End: Complemental strand, 47682467 - 47682381
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||| ||||||||| |||||| |||  |||||||||||||| || |||||||  |||| || |||| || |||||||||| |||||    
T  47682467 gggaataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaag 47682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 3e-41; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 41664018 - 41663856
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||| ||||||||||| ||||||||||||||||||||  ||| |||||||||  |||||||||||||    
T  41664018 ccaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgc 41663919  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||||||||||||||| ||||||| |||| || |||||||||| |||||    
T  41663918 atgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 5855468 - 5855630
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||||  ||||||||||||||||||||  |||  ||||||||| |||| ||||||||    
T  5855468 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgc 5855567  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||  |||||||||||||||| ||||||| || ||||||| || |||||    
T  5855568 atgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaag 5855630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 49078060 - 49078222
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||| ||||||||||| ||||||||||||||||||||  ||| || ||||||  |||| ||||||||    
T  49078060 ccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgc 49078159  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| ||||||||||||||||||| || | || |||||||||| |||||    
T  49078160 atgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaag 49078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 367 - 515
Target Start/End: Original strand, 26325772 - 26325920
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| || |||||||||||| | |||||| |||||||||||  ||| |||||||||  ||||||||||||||| ||||||||||     
T  26325772 ctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcat 26325871  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| ||||||||||| ||||||| |||| || |||||||||| |||||    
T  26325872 gagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 45362021 - 45361882
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| |  ||||||||||||||||||| ||||  ||||||||| |||| |||||||||| || |||||||  ||| ||||    
T  45362021 caaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggat 45361922  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||||| ||||||| || |||||||||| |||||    
T  45361921 tagtcgttcacctttagtgggtcggaaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 18915813 - 18915975
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || || || |||||||||  ||||||||||||| | ||||||||||||||||||||  ||| |||||||||  |||| ||||| ||    
T  18915813 ccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgc 18915912  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||||| |||||||||| |||||||| |||| |  |||||||||| |||||    
T  18915913 atgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 353 - 506
Target Start/End: Original strand, 15465911 - 15466064
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |||||| | |||| |||||||||||||| ||||||||||| |||||||||| ||| |||||||||| ||||||||||| |    
T  15465911 ccaagttgtttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcac 15466010  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccg 506  Q
    || ||||||||||||||   |||| |||| ||||| || |||| || |||||||    
T  15466011 atgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccg 15466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 367 - 515
Target Start/End: Complemental strand, 43959969 - 43959821
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || ||||| |||| |||||| |||||| | |||||||| ||||||| |||  ||| |||||||||| |||| |||||||||| |||||||||||    
T  43959969 ctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcac 43959870  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| ||||||||||  |||| |||||||||| |||||||||| |||||    
T  43959869 gagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 8763960 - 8764099
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | |||||||| |||||||| ||  ||| |||||||||  |||| |||||||||| ||||||||||||||| ||||    
T  8763960 caaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggat 8764059  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| |||| || |||| || |||||||||| |||||    
T  8764060 tagtcgtccaccgttggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 380 - 515
Target Start/End: Complemental strand, 18649487 - 18649352
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||||| |||  |||||||||| |||||||| ||||||  ||||| |    
T  18649487 gagctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaat 18649388  T
Q  480 cgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  |||| |||||||||  |||||||||| |||||    
T  18649387 cgcccacctttagtggattggaaaccggtgcgaaag 18649352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 17642166 - 17642004
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||||||||||||| ||||| ||||||| |  || ||||| ||||||||||  ||| |||||||||  |||| ||||||||    
T  17642166 ccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgc 17642067  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||||| ||||||||||| |||| || |||| || ||||| |||| |||||    
T  17642066 atgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 367 - 509
Target Start/End: Complemental strand, 30927875 - 30927733
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||||||| ||||| |||| |||||||||||| ||| |||||||||| |||| || || |||| ||||||||||     
T  30927875 ctccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcat 30927776  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||| ||||||||||| |||  || |||| |||||||||||||    
T  30927775 gagccggattagtcgtccacttttggtgggtcagaaaccggtg 30927733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 370 - 515
Target Start/End: Original strand, 16956429 - 16956574
Alignment:
Q  370 caatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgag 469  Q
    ||||| |||||||||| ||||||||||||| | ||||||||||| ||||| || |||| || |||||||||||  |||||||||| ||||||||||||||    
T  16956429 caatggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgag 16956528  T
Q  470 ctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    | |||||||||  ||||| || |||| || |||||| ||| |||||    
T  16956529 ccggattagtcactcacctttggtgggtcggaaaccagtgcgaaag 16956574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 14254407 - 14254296
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||| ||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||| |||| |||| ||||| ||| |||||| |||| ||||    
T  14254407 caaggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggat 14254308  T
Q  476 tagtcgttcacc 487  Q
    ||||||| ||||    
T  14254307 tagtcgtccacc 14254296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 376 - 506
Target Start/End: Complemental strand, 17358610 - 17358480
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| |||| | |||||||| |||  || ||||||| ||| |||||| ||||  |||    
T  17358610 caaggagctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgcatgagcccgat 17358511  T
Q  476 tagtcgttcaccattagtggatcagaaaccg 506  Q
    |||| ||||| | ||||||| ||||||||||    
T  17358510 tagttgttcatctttagtgggtcagaaaccg 17358480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 376 - 481
Target Start/End: Complemental strand, 40288616 - 40288511
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||| ||| |||||||||| |||| ||||  |||| ||||||| ||||||| ||||    
T  40288616 caaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagccggat 40288517  T
Q  476 tagtcg 481  Q
    ||||||    
T  40288516 tagtcg 40288511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 371 - 515
Target Start/End: Original strand, 34719740 - 34719884
Alignment:
Q  371 aatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagc 470  Q
    |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||  || |||||| |||| |||  |||||||||| ||||||||||||||     
T  34719740 aatggcaaggagctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagt 34719839  T
Q  471 tggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
      ||||||||| ||||| || |||| || ||||| |||| |||||    
T  34719840 cagattagtcgctcacctttggtgggtcggaaactggtgcgaaag 34719884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 487
Target Start/End: Original strand, 10336485 - 10336596
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||| |||||||| || ||||| |||||||||||||||| |||||||||| |||  |||||||||| |||||||||| |||| ||||    
T  10336485 caaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggat 10336584  T
Q  476 tagtcgttcacc 487  Q
    || |||| ||||    
T  10336585 taatcgtccacc 10336596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 387 - 490
Target Start/End: Original strand, 13262063 - 13262166
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||||| |||| |||||||||||||||||||||| ||| | |||||||||||||||| | |||||  |||||||||||||  ||||||||||| |||    
T  13262063 ttccaaggatgtatatggggaataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccac 13262162  T
Q  487 catt 490  Q
    ||||    
T  13262163 catt 13262166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 353 - 480
Target Start/End: Complemental strand, 33004177 - 33004050
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| |||  |||||||| ||||||||||||||| |||||||| ||| |||||||| ||| || ||||| | |||| ||||||||    
T  33004177 ccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgc 33004078  T
Q  453 atacctctacgcacgagctggattagtc 480  Q
    || ||||||||||||||| |||||||||    
T  33004077 atgcctctacgcacgagccggattagtc 33004050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 353 - 480
Target Start/End: Complemental strand, 48798232 - 48798105
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||||| |  ||||| || |||||||||| |||||| |||||||| |||||||| |||||||||||| ||| |||||||||| |||   |||||||    
T  48798232 ccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgc 48798133  T
Q  453 atacctctacgcacgagctggattagtc 480  Q
    || |||||||||| |||| |||||||||    
T  48798132 atgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 10422734 - 10422868
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || || || |||||||||| |||||| |||||||  |||||||||||||||||||||  ||  ||||||||  |||| ||||||||    
T  10422734 ccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgc 10422833  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||||||| |||| ||||||||||| ||||    
T  10422834 atgcctctacgcatgagccggattagtcgtccacc 10422868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 390 - 516
Target Start/End: Original strand, 16263528 - 16263654
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||||||| |||| |||||||||| ||||||||||  ||| ||| ||||||| |||  |    
T  16263528 caaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttt 16263627  T
Q  490 tagtggatcagaaaccggtgtgaaagt 516  Q
    |  |||||| |||||||||| ||||||    
T  16263628 tgatggatcggaaaccggtgcgaaagt 16263654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 354 - 484
Target Start/End: Complemental strand, 47313059 - 47312930
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||||| || ||| ||| || ||||||||||||||||||||||||||||||| ||||   || ||||||||||||||| ||||||| |    
T  47313059 caagttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctag-gggaacaacgtttggccagtgcgta 47312961  T
Q  454 tacctctacgcacgagctggattagtcgttc 484  Q
    | |||||||||| ||||  ||||||||||||    
T  47312960 tgcctctacgcatgagccagattagtcgttc 47312930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 367 - 515
Target Start/End: Complemental strand, 9659326 - 9659179
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||||||| |||||||||   ||||||||||||||||||||  ||| ||||||||||||||   ||||||||| ||| ||||||     
T  9659326 ctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccag-gggaacaacgtttgactagtgcgcatgcctttacgcat 9659228  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| ||||||||||| |||| || |||| |  |||||||||| |||||    
T  9659227 gagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 355 - 515
Target Start/End: Original strand, 14357703 - 14357863
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    |||||| |||| ||||| || ||||||| |  ||||||||||||||||||  |||| | |||||||||| || | | |||||||||||  ||||||||||    
T  14357703 aagttgcttgagctccagtggcaaggagtttcttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcat 14357802  T
Q  455 acctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
     ||||||||||||| | |||||| ||||| ||||||  ||| || |||||||||| |||||    
T  14357803 gcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaag 14357863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 17092639 - 17092483
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||| ||| | || |||| ||||| || || ||||||||  ||| |||| || ||||||||||||| || ||||||| |||| ||||| |     
T  17092639 ccaagttgcttgaactctagtggcaagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgt 17092540  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||||||||||| ||||||||||| |||| || || |||||||||||||||    
T  17092539 atgcctctacgcacgagccggattagtcgtccacctttggtagatcagaaaccggtg 17092483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 355 - 487
Target Start/End: Complemental strand, 32151082 - 32150950
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| || |||||||||| |||||||||||| |  | |||||| | |||||||||| ||| ||||||||| ||||||||||||||||    
T  32151082 aagttgtttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcat 32150983  T
Q  455 acctctacgcacgagctggattagtcgttcacc 487  Q
     ||| |||||| |||| | |||||||| |||||    
T  32150982 gcctttacgcatgagccgaattagtcgctcacc 32150950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 2981070 - 2980931
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||| ||||||||| ||||||||| ||||||||||  ||| |||||||||  |||| ||||| |||| ||||||||||||||  ||||    
T  2981070 caaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggat 2980971  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| ||   ||||||| || |||| ||||| |||||    
T  2980970 tagtcgtccatgtttagtgggtcggaaatcggtgcgaaag 2980931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 11398050 - 11397889
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||| ||||| || |||||||||||||||||   || ||||||||||||||| || ||||     
T  11398050 ccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgag-gggaacaacgtttggccaatgcgt 11397952  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||  ||||||||||| |||| || |||| || |||| ||||| |||||    
T  11397951 atgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaag 11397889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 33418277 - 33418143
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||| | || ||||||||| |||||||   || ||| |||||| |||| ||||||||    
T  33418277 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgc 33418178  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||| |||||||| ||||||||||| ||||    
T  33418177 atgcctctatgcacgagccggattagtcgtccacc 33418143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 34334434 - 34334356
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||  |||| ||||||||||    
T  34334434 caaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 34334356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 373 - 487
Target Start/End: Original strand, 48761142 - 48761256
Alignment:
Q  373 tgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctg 472  Q
    ||||||||| ||| ||||||| | |||||  || ||||| || |||||||||||   ||||||||||||||||||||  ||| |||||||||||||||||    
T  48761142 tgacaaggaactccttccaagaatgtatcccggaaatactggattcgattttcaagaggaacaacgtttggtcagtggacatgcctctacgcacgagctg 48761241  T
Q  473 gattagtcgttcacc 487  Q
    |||||||||| ||||    
T  48761242 gattagtcgtccacc 48761256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 354 - 515
Target Start/End: Complemental strand, 10173132 - 10172971
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||||| || ||||| |||| |||||||||||||||||||||||||||| ||| |||  ||    |||||||| |||| |||||| ||    
T  10173132 caagttgtttgggctccagtggcaaggtgctccttccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgccca 10173033  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    | |||||||||| |||| |||||| |||  |||| || |||| || |||||||||| |||||    
T  10173032 tgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaag 10172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 378 - 515
Target Start/End: Complemental strand, 50503498 - 50503361
Alignment:
Q  378 aggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||||||| || |||||||||||| |||||||| |||||||||||  ||| |||||||||  |||  |||||||||| ||||||||||||||| |||||     
T  50503498 aggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggattt 50503399  T
Q  478 gtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||  ||||| | |||| || ||||||| || |||||    
T  50503398 gtcgcccaccaatggtgggtcggaaaccgatgcgaaag 50503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 28416922 - 28417054
Alignment:
Q  383 ctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgt 482  Q
    |||||| ||||||||||| |||| |||||||| || |||| |||| ||||||||||||||| ||| |||||| | ||||||||||| |  ||||||| |     
T  28416922 ctcatttcaaggacgtatatgggaaataccggatttgattctcagagggaacaacgtttggccagggcgcatgcatctacgcacgaacccgattagttgc 28417021  T
Q  483 tcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| |||  ||||||  |||||||||||||||    
T  28417022 tcactattgatggatcgaaaaccggtgtgaaag 28417054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 355 - 487
Target Start/End: Complemental strand, 32143005 - 32142874
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  || || || ||| |||||||||||||||||||| |  || ||||||||||||||||||||| |||||||||  |||| ||||||||||    
T  32143005 aagttgtttggacttcagtggcaaagagctcattccaaggacgtaccctgg-aataccgggttcgattttcagggggaacaacacttggccagtgcgcat 32142907  T
Q  455 acctctacgcacgagctggattagtcgttcacc 487  Q
     ||| |||||| |||| | |||||||| |||||    
T  32142906 gcctttacgcatgagccgaattagtcgctcacc 32142874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 399 - 509
Target Start/End: Original strand, 35908749 - 35908858
Alignment:
Q  399 atctggggaataccgggttcgattttcagtgggaacaacg-tttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggat 497  Q
    |||| ||||||||||| ||||||||| || |||||||||  |||||||||||||||| |||||||||| |||| ||||||||||| ||||||  |||| |    
T  35908749 atctagggaataccggattcgatttttagggggaacaacactttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccat--gtgggt 35908846  T
Q  498 cagaaaccggtg 509  Q
    | ||||||||||    
T  35908847 cggaaaccggtg 35908858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 355 - 482
Target Start/End: Original strand, 32819 - 32946
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| || ||| |||||| ||||||||||||| | |||||||| ||||| |||||  |||  ||||||||| ||||||||||| |||    
T  32819 aagttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacat 32918  T
Q  455 acctctacgcacgagctggattagtcgt 482  Q
     |||||||||| |||| | |||||||||    
T  32919 gcctctacgcatgagccgaattagtcgt 32946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 354 - 469
Target Start/End: Original strand, 2567223 - 2567338
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  || || || |||||||||| ||||||||||||||  || |||||||||||||||||||| | |  ||||||| |||| |||||||||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgca 2567322  T
Q  454 tacctctacgcacgag 469  Q
    | ||||||| ||||||    
T  2567323 tgcctctactcacgag 2567338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 353 - 508
Target Start/End: Original strand, 5503977 - 5504132
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||   |||| || |||||||||| |||| || |||||||||||||||| | ||||||||| |||| |  ||||||| ||| | ||||| |    
T  5503977 ccaagttgtttgggttccagtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgattctcagggaaaacaacgcttgattagtgcac 5504076  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggt 508  Q
    || |||||||||| |||| ||||||||||| |||| ||  ||| || |||||||||    
T  5504077 atgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggt 5504132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 353 - 504
Target Start/End: Complemental strand, 12744685 - 12744534
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |||||  || ||| ||||||||||||||||| |||||| | | |||||||||||| |||||||||| |||   |||||||    
T  12744685 ccaagttgtttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgc 12744586  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaac 504  Q
    ||  ||||||||| |||| | |||||||| ||||  || |||| ||||||||    
T  12744585 atgtctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaac 12744534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 353 - 504
Target Start/End: Complemental strand, 12755675 - 12755524
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |||||  || ||| ||||||||||||||||| |||||| | | |||||||||||| |||||||||| |||   |||||||    
T  12755675 ccaagttgtttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgc 12755576  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaac 504  Q
    ||  ||||||||| |||| | |||||||| ||||  || |||| ||||||||    
T  12755575 atgtctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaac 12755524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 353 - 468
Target Start/End: Complemental strand, 15238268 - 15238153
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  |||||||| |||||||||| ||||||||||||| || ||||||| |||||||||||  ||| |||| ||||| |||| || || ||    
T  15238268 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggttcgattcccagggggagcaacgcttggccaatgagc 15238169  T
Q  453 atacctctacgcacga 468  Q
    || |||||||||||||    
T  15238168 atgcctctacgcacga 15238153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 26660125 - 26660245
Alignment:
Q  394 gacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagt 493  Q
    |||||||  ||||||||||||||||||||| ||  ||||||||| |||| ||||| ||||| |||||||||| |||| ||||||||||  |||| || ||    
T  26660125 gacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggt 26660223  T
Q  494 ggatcagaaaccggtgtgaaag 515  Q
    || || |||||||||| |||||    
T  26660224 gggtcggaaaccggtgcgaaag 26660245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 469
Target Start/End: Original strand, 31152662 - 31152778
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||| ||| |  |||||||||||||||||||| | | ||||| |||| |||||||||||||    
T  31152662 ccaagttgtttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgc 31152761  T
Q  453 atacctctacgcacgag 469  Q
     | ||||||| ||||||    
T  31152762 gtgcctctacacacgag 31152778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 407 - 515
Target Start/End: Original strand, 44969665 - 44969772
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccg 506  Q
    |||||| ||||||||| |||| | |||||||| |||| ||||| |||| || ||||||| |||| ||||||||||| || |||| ||||||| |||||||    
T  44969665 aataccaggttcgattctcag-gagaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccg 44969763  T
Q  507 gtgtgaaag 515  Q
    |||||||||    
T  44969764 gtgtgaaag 44969772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 388 - 515
Target Start/End: Complemental strand, 45726560 - 45726433
Alignment:
Q  388 tccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    |||||||||||| | | |||||||| ||||||||| ||||  |||| ||| ||||| ||||||| ||  ||||||||| |||| ||||||||||||||||    
T  45726560 tccaaggacgtacccgaggaatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacc 45726461  T
Q  488 attagtggatcagaaaccggtgtgaaag 515  Q
     || ||||||| || || |||| |||||    
T  45726460 tttggtggatcggagactggtgcgaaag 45726433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 377 - 495
Target Start/End: Complemental strand, 2270390 - 2270276
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||||||||||||||||||| ||| | |||||| |||||||  ||| |||||||| |||||||| ||||||||||||||||||| ||| | ||||    
T  2270390 aaggagctcattccaaggacgtatc-gggaattaccggattcgattc-cag-gggaacaatgtttggtctgtgcgcatacctctacgcatgag-tcgatt 2270295  T
Q  477 agtcgttcaccattagtgg 495  Q
    | || |||||| |||||||    
T  2270294 aatcattcacctttagtgg 2270276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 353 - 503
Target Start/End: Complemental strand, 12036906 - 12036756
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||  || |||| ||||| ||||||||||||| || | |||||| ||||| ||||   || |||||||| | |||| ||||||||    
T  12036906 ccaagttgtttgggctccggtggcaagaagctccttccaaggacgtacctagagaatactgggtttgattcctagggggaacaatgcttggccagtgcgc 12036807  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaa 503  Q
    || |||||||||||||||  ||||| |||| |||| || ||||||| ||||    
T  12036806 atgcctctacgcacgagccagattaatcgtccacctttggtggatcggaaa 12036756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 481
Target Start/End: Complemental strand, 5063982 - 5063878
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||| ||||| ||||||||||||||||||||||||  || ||||||| | || ||| |||||| |||| ||||||| ||  ||||| |||||||||||||    
T  5063982 caagaagctccttccaaggacgtatctggggaatattggattcgattcttag-gggcacaacgcttggccagtgcgtatgtctctatgcacgagctggat 5063884  T
Q  476 tagtcg 481  Q
    ||||||    
T  5063883 tagtcg 5063878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 515
Target Start/End: Original strand, 37339799 - 37339928
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttca-gtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttca 485  Q
    ||||||||| ||| | ||||||||||||||||||||  || | ||| |||||| |||| |||||||||| |||| |||||||||| ||||||||||  ||    
T  37339799 ttccaaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgccca 37339898  T
Q  486 ccattagtggatcagaaaccggtgtgaaag 515  Q
    || || |||| |  |||||||||| |||||    
T  37339899 cctttggtgggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 407 - 487
Target Start/End: Complemental strand, 33498947 - 33498867
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    |||||||||||||||| ||||  ||| ||||| |||| |||||||||| |||||||||| |||| ||||||||||| ||||    
T  33498947 aataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 33498867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 430 - 505
Target Start/End: Original strand, 10507721 - 10507796
Alignment:
Q  430 ggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaacc 505  Q
    |||||||||||||| ||||| ||||||||||||||| |||| ||||||||||| ||||| | |||| || ||||||    
T  10507721 ggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtccaccactggtgggtcggaaacc 10507796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 367 - 482
Target Start/End: Original strand, 17389732 - 17389846
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| || ||| ||||| || ||| |||| ||| |||||||||| | |||||||| |||||  |||||||||| |||| |||||     
T  17389732 ctccagtggcaaggagctcctttcaatgacgtttccgggaaatatcggattcgattttcgg-gggaacaatgtttgaccagtgcgcatgcctccacgcat 17389830  T
Q  467 gagctggattagtcgt 482  Q
    ||||||||||||||||    
T  17389831 gagctggattagtcgt 17389846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 50371973 - 50371834
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||| ||||| |||||||   |||| || |||||||||||||   |||||||| |||| |||| ||||| | ||||||||| ||| ||||    
T  50371973 caaggagctccttctaaggatgtatctgaaaaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggat 50371874  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  || | || ||||||| |||||||||| |||||    
T  50371873 tagtcgcccatctttggtggatcggaaaccggtgcgaaag 50371834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 17988794 - 17988693
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||| ||||||||| |  ||||||||| |||| ||||||||| || ||||| | |||| ||||||||||||||||||||| || | ||||||||    
T  17988794 gagctccttctaaggacgtaccccgggaataccaggtttgattttcag-ggaaacaatgcttggccagtgcgcatacctctacgcatgaaccggattagt 17988696  T
Q  480 cgt 482  Q
    |||    
T  17988695 cgt 17988693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 28324709 - 28324615
Alignment:
Q  386 attccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtc 480  Q
    |||| ||||||||| || ||||||| |||||||||||  | | || ||||||  ||||||||||||||| |||||||||| |||| |||||||||    
T  28324709 attcaaaggacgtacctagggaatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 482
Target Start/End: Complemental strand, 31576709 - 31576580
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||||||| |||||||||||  |  |||||||||||||||| |||| || ||||| | |||| || ||||     
T  31576709 ccaagttgtttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaatgcgt 31576610  T
Q  453 atacctctacgcacgagctggattagtcgt 482  Q
     | |||||||||| |||| || ||||||||    
T  31576609 gtgcctctacgcatgagccggcttagtcgt 31576580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 470
Target Start/End: Original strand, 34877936 - 34878053
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || || || |||||||| | ||||||||||||||  |||||||||| |||||||||   ||  ||||||||  |||| ||||||||    
T  34877936 ccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgcgc 34878035  T
Q  453 atacctctacgcacgagc 470  Q
    || ||||||| |||||||    
T  34878036 atgcctctacacacgagc 34878053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 508
Target Start/End: Complemental strand, 21849307 - 21849212
Alignment:
Q  412 cgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggt 508  Q
    |||||||||||  ||| |||||||||| ||||  ||||||||| ||||||||||||||| |||||||||| |||| ||| |||| ||  ||||||||    
T  21849307 cgggttcgattcccag-gggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggt 21849212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 480
Target Start/End: Original strand, 25165371 - 25165473
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||| ||||| |||||||||||||| ||||||| |||| |||||||||  |  | |||||||||| |||||| |||| ||| ||||    
T  25165371 caaggagctccttccaag-acgtacctggggaataccggattcgattatcag-gggaacaacactctgccagtgcgcatgcctctaggcacaagccggat 25165468  T
Q  476 tagtc 480  Q
    |||||    
T  25165469 tagtc 25165473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 495
Target Start/End: Complemental strand, 25178723 - 25178596
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| |||||| |||||| | | |||||||||| |||| ||||||| |||| |||   |  ||||| |||| |||| ||||||||||||||||||  ||    
T  25178723 ctccagtgacaatgagctcctactaaggacgtatttgggaaataccgagttctattcctaa-gggaataacgcttggccagtgcgcatacctctacagac 25178625  T
Q  467 gagctggattagtcgttcaccattagtgg 495  Q
     ||| |||||||||||||||| |||||||    
T  25178624 aagccggattagtcgttcacctttagtgg 25178596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 509
Target Start/End: Original strand, 50094926 - 50095006
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||||||||||||  |||| ||||| | |||||||| |||  ||||||||||| |||||||||||| || ||||||||||    
T  50094926 gggaacaacgtttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtg 50095006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 440 - 515
Target Start/End: Complemental strand, 4581757 - 4581682
Alignment:
Q  440 ttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| |||||||||| ||||||||||||||| ||| ||||||| |||| || |||| || |||||||||| |||||    
T  4581757 ttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4581682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 428 - 515
Target Start/End: Complemental strand, 5143240 - 5143154
Alignment:
Q  428 tgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||||||| ||||||||| ||||| ||||||||||| ||  |||||||||| ||||| ||  ||||||  |||||||||||||||    
T  5143240 tgggaacaacgcttggtcagtacgcatgcctctacgcac-agacggattagtcgctcacctttgatggatcgaaaaccggtgtgaaag 5143154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 412 - 515
Target Start/End: Complemental strand, 35211275 - 35211172
Alignment:
Q  412 cgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtg 511  Q
    |||||||||||| |||  ||||||| | || | || | ||||| |||||||||| |||||| ||||||||| |||| || |||| || ||||||||||||    
T  35211275 cgggttcgatttccagaaggaacaatgcttagccaatacgcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtg 35211176  T
Q  512 aaag 515  Q
    ||||    
T  35211175 aaag 35211172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 367 - 509
Target Start/End: Complemental strand, 9853425 - 9853283
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||| ||| | ||  ||||||||||||||||   || || ||||||||||   |||||||||| ||||||| |||    
T  9853425 ctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcatgcctctacacac 9853326  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || |  ||||| |||| |||| || |||| ||||||| |||||    
T  9853325 gaaccagattaatcgtccacctttggtgggtcagaaatcggtg 9853283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 353 - 510
Target Start/End: Complemental strand, 21429760 - 21429609
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||||| |||| || |||||||||||||| || | ||||   ||||||||||| || | |||||||| |||| |||||||     
T  21429760 ccaagttgtttgggctccagtgacatggagttccttccaaggacgtatttgagaaatattaggttcgatttttagggagaacaacgcttggccagtgcgg 21429661  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgt 510  Q
    |      ||||||||||| | |||||||||| ||| ||| ||| || |||||||||||    
T  21429660 a------tacgcacgagccgtattagtcgtttaccgttaatgggtcggaaaccggtgt 21429609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 26258666 - 26258783
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||| |||||| |||||| | |||||||||||| ||||||| |||| |   |||||| ||||||||||| ||| ||| |||||| |||  |||||    
T  26258666 aaggagctccttccaaagacgtacccggggaataccggattcgattctcag-gaagacaacgcttggtcagtgcacatgcctttacgcatgagtcggatt 26258764  T
Q  477 agtcgttcaccattagtgg 495  Q
    | |||| |||| |||||||    
T  26258765 aatcgtccacctttagtgg 26258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 41743242 - 41743288
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||    
T  41743242 caaggagctccttccaaggacgtatccgaggaataccgggttcgatt 41743288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 454
Target Start/End: Complemental strand, 8905312 - 8905212
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| |||||| |||||||| || ||||| ||||| ||| |||||  |||||||||| |||| ||||||||    
T  8905312 ccaagttgtttggactctagtggcaaggagctccttccaatgacgtatccggagaatatcgggtacga-tttcaaggggaacaacgcttggccagtgcgc 8905214  T
Q  453 at 454  Q
    ||    
T  8905213 at 8905212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 454
Target Start/End: Original strand, 51437415 - 51437516
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || || |||||| |||||| || |||||||||||| | |||||| |||||||||||  ||  |||||||||| |||  ||||||||    
T  51437415 ccaagttgtttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgc 51437514  T
Q  453 at 454  Q
    ||    
T  51437515 at 51437516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 367 - 479
Target Start/End: Original strand, 6563401 - 6563513
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||| ||| | |  ||| |||||||||||||   || |||||||||| |||| |||||| |||  ||||||||||    
T  6563401 ctccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgcac 6563500  T
Q  467 gagctggattagt 479  Q
    ||||  |||||||    
T  6563501 gagccagattagt 6563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 13265914 - 13266018
Alignment:
Q  383 ctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgt 482  Q
    ||||||| ||||||||||| | |||||||| |||||||||   || |  |||||||| | | |||||||||| |||||||||| |||| || ||||||||    
T  13265914 ctcattctaaggacgtatccgaggaatacctggttcgattcctagggaaaacaacgtctagccagtgcgcatgcctctacgcatgagccgggttagtcgt 13266013  T
Q  483 tcacc 487  Q
     ||||    
T  13266014 ccacc 13266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 422
Target Start/End: Complemental strand, 892457 - 892390
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    ||||||||||  || || || |||||||||| || |||||||||||  ||||||||||||||||||||    
T  892457 aagttgtttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggttcgatt 892390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 506
Target Start/End: Complemental strand, 42710246 - 42710147
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccg 506  Q
    |||| |||||||||||||||| || |||||   |||| |||||||||| ||||||||||  | | | ||||||||| ||||||| || |||| |||||||    
T  42710246 aatatcgggttcgattttcaggggaaacaatacttggccagtgcgcatgcctctacgcataaaccgaattagtcgtccaccattggtagatcggaaaccg 42710147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 45536688 - 45536767
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    |||||| |||||| | || ||||||||||||||||||  |  |||||||||| |||| |||||| ||| |||||||||||    
T  45536688 ttccaatgacgtacccggagaataccgggttcgatttctaaggggaacaacgcttggccagtgcacatgcctctacgcac 45536767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 438 - 508
Target Start/End: Complemental strand, 17899957 - 17899887
Alignment:
Q  438 gtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggt 508  Q
    |||||||||||| |||   ||||||||| ||||  | ||||||||||| |||||||||||| |||||||||    
T  17899957 gtttggtcagtgtgcacgtctctacgcatgagccagcttagtcgttcatcattagtggatcggaaaccggt 17899887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 353 - 454
Target Start/End: Original strand, 18808211 - 18808312
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||| ||| |  ||||||||||||||||  |||||| | ||||| ||| |||| |||||||||| |||  ||||||||    
T  18808211 ccaagttgtttgggctccagtggcaatgagtttcttccaaggacgtatctaaggaataacaggttcaattctcagagggaacaacgcttgaccagtgcgc 18808310  T
Q  453 at 454  Q
    ||    
T  18808311 at 18808312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 54261171 - 54261334
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||   ||  ||||||||| |||| ||||||||    
T  54261171 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgc 54261270  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    || |||||||||| |||| |||||||||||||||| ||||||| || |||||||||| ||||||    
T  54261271 atgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagt 54261334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 353 - 514
Target Start/End: Original strand, 49198296 - 49198457
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |||||||||| |  |||||||||| |||| ||||||||||||||||||||   || |||||||||  |||| ||||||||    
T  49198296 ccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgc 49198395  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    || |||||||||| |||| ||||||||||| ||||||| ||||||||||||||| |||||||    
T  49198396 atgcctctacgcatgagccggattagtcgtccaccattggtggatcagaaaccgatgtgaaa 49198457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 45877399 - 45877562
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||| | ||||||||||||||| ||||||||||||||||||||| ||| || ||||||  |||| |||||| |    
T  45877399 ccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcac 45877498  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    || |||||||||| |||| |||||||||||||||||||  ||| || |||||||||| ||||||    
T  45877499 atgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaagt 45877562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 13893871 - 13894033
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| |||||||||||| || ||||||||||||||| ||||| ||| |||||||||| ||||||| |||||    
T  13893871 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgc 13893970  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||| ||||||| ||||||||||  |||| || |||||||  ||||||||| |||||    
T  13893971 atgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaag 13894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 15320131 - 15320293
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | |||||||||||||||||||||  ||  ||||||| | |||| ||||| ||    
T  15320131 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgc 15320230  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||||| ||||||||||  |||| || |||| ||||||||||||| |||||    
T  15320231 atgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 29127864 - 29128026
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||||||| || |||||||||||||||||||||||| |||||||||||| ||| | |||||||  |||||||||||||    
T  29127864 ccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgc 29127963  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| ||||||||||  |||| || |||| || ||||||| || |||||    
T  29127964 atgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 51060443 - 51060281
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||  ||||| |||||||||  |||| |||||||| ||||||||||| |||| |||||||||  |||||||||||||    
T  51060443 ccaagttgtttggactccagtggcaaatagctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgc 51060344  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| || ||||||||||||| ||||||| |||| || |||||||||| |||||    
T  51060343 atgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 51060281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 376 - 514
Target Start/End: Original strand, 6462380 - 6462518
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  ||| | |||||||| |||| |||||||||| |||||||||| |||| ||||    
T  6462380 caaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggat 6462479  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    ||||||  ||  |||||||| |  |||||||||| ||||    
T  6462480 tagtcgaccattattagtgggttggaaaccggtgcgaaa 6462518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 376 - 504
Target Start/End: Original strand, 49543487 - 49543615
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||||||||||||  ||||||| ||||||||||| |||  ||||||||||||||||||||| |||| ||||||||||||||| | ||    
T  49543487 caaggagctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaat 49543586  T
Q  476 tagtcgttcaccattagtggatcagaaac 504  Q
    ||||||  |||| ||||||| || |||||    
T  49543587 tagtcgcccacctttagtgggtcggaaac 49543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 353 - 488
Target Start/End: Complemental strand, 42412936 - 42412801
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  |||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||  | | |||||||||| ||||  ||||| |    
T  42412936 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgccc 42412837  T
Q  453 atacctctacgcacgagctggattagtcgttcacca 488  Q
    || |||||||||| |||| |||||||||| ||||||    
T  42412836 atgcctctacgcatgagccggattagtcgctcacca 42412801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 25294905 - 25295067
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||| |||| || | || ||||||  |||| ||||||||    
T  25294905 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgc 25295004  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||| ||| |||| ||||||||||| ||||||| |||| |  |||||||||| |||||    
T  25295005 atgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaag 25295067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 29762317 - 29762155
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||| ||||  |||||||| ||||| ||||| |||| || ||||||  |||| ||||||||    
T  29762317 ccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgc 29762218  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||| ||| |||||||||||||||| ||||||| |||| || |||||||||| |||||    
T  29762217 atgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 353 - 482
Target Start/End: Original strand, 33251607 - 33251736
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||  || ||| |||||| ||||||||||||||  ||||||||||||||||||||  | ||||||||||||||||| ||||| ||    
T  33251607 ccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgc 33251706  T
Q  453 atacctctacgcacgagctggattagtcgt 482  Q
    || |||||||||| |||| |||||||||||    
T  33251707 atgcctctacgcatgagccggattagtcgt 33251736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 378 - 514
Target Start/End: Original strand, 53649697 - 53649833
Alignment:
Q  378 aggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||||||| ||||||||||||||  |||||||||||||||||||| |||| | |||||||  |||| |||||||| |  ||||||||| |||| ||||||    
T  53649697 aggagctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggatta 53649796  T
Q  478 gtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||||||||| ||  |||||| |||||||||| ||||    
T  53649797 gtcgttcacctttgatggatcggaaaccggtgcgaaa 53649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 354 - 468
Target Start/End: Original strand, 31072824 - 31072938
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  |||||||| |||||||||| || |||||||||| | || ||||||| |||||||||| ||| |||||||||| ||||||||||| ||    
T  31072824 caagttgtttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcaca 31072923  T
Q  454 tacctctacgcacga 468  Q
    | |||||||||||||    
T  31072924 tgcctctacgcacga 31072938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 48341965 - 48342127
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| |||||||||||||||||| |||   || |||||||||| ||||  |||||||    
T  48341965 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgc 48342064  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| || |  |||||||||| || | || ||||||| ||||| |||| |||||    
T  48342065 atgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaaacaggtgcgaaag 48342127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 490
Target Start/End: Original strand, 3762996 - 3763132
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||| ||| | |||||| |||||| || |||||||||||| ||| |||||||| |||||||  ||| || ||||||| |||||||||| ||    
T  3762996 ccaagttgtttgagctctagtgacaaagagctcctttcaaggacgtatccgggaaataccggattcgattcacagagg-aacaacgcttggtcagtgtgc 3763094  T
Q  453 atacctctacgcacgagctggattagtcgttcaccatt 490  Q
    ||  |||||||||||| ||||||||||||| |||||||    
T  3763095 atgtctctacgcacgaactggattagtcgtccaccatt 3763132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 380 - 481
Target Start/End: Complemental strand, 15795628 - 15795528
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||||||||| | ||||||||||| ||||||||  ||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  15795628 gagctccttccaaggacgtacccggggaataccgagttcgattcccag-gggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagt 15795530  T
Q  480 cg 481  Q
    ||    
T  15795529 cg 15795528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 367 - 508
Target Start/End: Original strand, 29135872 - 29136013
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||  ||||||||||||||| |||||||||||| |||||||  ||| |||||||||  |||| |||||||||| ||||||||||     
T  29135872 ctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcat 29135971  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggt 508  Q
    |||| ||||||||| | ||||||| |||| |  |||||||||    
T  29135972 gagccggattagtcttccaccattggtgggttggaaaccggt 29136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 390 - 515
Target Start/End: Original strand, 54237430 - 54237555
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    |||||||||||| ||| |||| |||| ||||||||||| | |||||||  |||||||||||||||  ||||||||| |||| |||| |||||| ||||||    
T  54237430 caaggacgtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccat 54237529  T
Q  490 tagtggatcagaaaccggtgtgaaag 515  Q
    |||||| || |||||||||| |||||    
T  54237530 tagtgggtcggaaaccggtgcgaaag 54237555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 353 - 509
Target Start/End: Original strand, 10040502 - 10040657
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||| ||||||||| | |||||||| ||||||||||| |||| |||||||||| |||| ||||||||    
T  10040502 ccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccagtgcgc 10040600  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||||||||||| ||| | ||||| |||| || |||| |  ||||||||||    
T  10040601 atgcctctacgcacgagccggaatggtcgtccacctttggtgggttggaaaccggtg 10040657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 35315901 - 35316029
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||| |||||| ||||||||||||| | || ||||| |||||||||||  ||| |||||||||  |||| ||||||||    
T  35315901 ccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgc 35316000  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || |||||||||| |||||||||||||||    
T  35316001 atgcctctacgcatgagctggattagtcg 35316029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 30767395 - 30767281
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || ||||||| || ||||||||| ||| |||||||||| |||||||||||| ||| |||||||||  |||| ||||| |||| |||||||||||    
T  30767395 ctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcac 30767296  T
Q  467 gagctggattagtcg 481  Q
    |||| ||||||||||    
T  30767295 gagccggattagtcg 30767281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 353 - 482
Target Start/End: Complemental strand, 35923785 - 35923656
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || ||| |||||||||||||||||||| |||| ||||||| |||||||||   || ||||||||||||||| ||||||||    
T  35923785 ccaagttgtttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgc 35923686  T
Q  453 atacctctacgcacgagctggattagtcgt 482  Q
    || |||||| |||||||  | |||||||||    
T  35923685 atgcctctaagcacgagtcgaattagtcgt 35923656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 353 - 514
Target Start/End: Complemental strand, 51683116 - 51682955
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || | |||||||| |||||| |||||||| |||||||||| |||||||||  ||| |||||||||| |||  ||||||||    
T  51683116 ccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgc 51683017  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    || ||||| | ||||||| ||||||||||  ||||| | |||| || |||||| ||| ||||    
T  51683016 atgcctctccacacgagccggattagtcgcccaccaatggtgggtcggaaaccagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 376 - 480
Target Start/End: Original strand, 928568 - 928672
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||||||||||||||||| || ||||||||| | ||||||| |||| |||||||||  |||  |||||||||| || |||||||||||| ||||    
T  928568 caaggagctcattccaaggacgtacctagggaataccagattcgattctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggat 928667  T
Q  476 tagtc 480  Q
    |||||    
T  928668 tagtc 928672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 355 - 515
Target Start/End: Complemental strand, 3136853 - 3136694
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||  || |||| ||||| || |||||||||| | |||||||||||| |||||||||||| |||||||||  |||| ||||||||||    
T  3136853 aagttgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattttcag-gggaacaacacttgggcagtgcgcat 3136755  T
Q  455 acctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
     |||||||||| |||  ||||||||||| |||| || || | || |||||||||| |||||    
T  3136754 gcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaag 3136694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 10855329 - 10855457
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||| |||  |||| ||||||||||| ||||| ||| |||||||||| |||| |||| |||    
T  10855329 ccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgc 10855428  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||||| | | ||||||||    
T  10855429 atgcctctacgcacgaaccgaattagtcg 10855457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 26207963 - 26207807
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||| ||| | ||||||||||||||||||||  ||  |||||||||| |||  ||||| ||    
T  26207963 ccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgc 26207864  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || |||||||||| |||| ||||||||||  ||  |||||||| || ||||||||||    
T  26207863 atgcctctacgcatgagccggattagtcggccattattagtgggtcggaaaccggtg 26207807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 52364937 - 52364833
Alignment:
Q  378 aggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||||||| ||||||||||||| | ||||||||||| ||||||||  |||  ||||||||| |||  |||||||||| ||||||||||||||||||||||    
T  52364937 aggagctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T
Q  478 gtcgt 482  Q
     ||||    
T  52364837 atcgt 52364833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 55069841 - 55069685
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |||||| |||||| || |||||||||||   |||||||| ||||| ||||   |  ||||||||||||||| |||||| |    
T  55069841 ccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtttgattcctatagggaacaacgtttggccagtgcac 55069742  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||||||||||| |||||| ||| ||||| || |||| || ||||||||||    
T  55069741 atgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtg 55069685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 387 - 506
Target Start/End: Complemental strand, 34662447 - 34662328
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    |||||||||||||  ||||||||| ||||||||||||||||  |||| |||||||||||||| |||||  ||||| ||| |||| | ||||||||| |||    
T  34662447 ttccaaggacgtacttggggaatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccac 34662348  T
Q  487 cattagtggatcagaaaccg 506  Q
    | |||||||||  |||||||    
T  34662347 ctttagtggattggaaaccg 34662328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 380 - 515
Target Start/End: Original strand, 47219116 - 47219251
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||||||||||| |||||||||| |||||||||  ||  || ||||||| ||||  ||||||||| |||||||||| |||| ||||||||    
T  47219116 gagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagt 47219215  T
Q  480 cgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||| |||| ||  ||| || |||||||||| |||||    
T  47219216 cgtccacctttgatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 403 - 509
Target Start/End: Original strand, 8362572 - 8362678
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    |||||||||||||||| |||  |||||| |||||||||||| |||| ||||| |||||||||| ||||   ||||||||| |||| |||||||||| |||    
T  8362572 ggggaataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaa 8362671  T
Q  503 accggtg 509  Q
    |||||||    
T  8362672 accggtg 8362678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 11687271 - 11687161
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||| ||||| ||||||||||||| |||| |||||||||||| |||| |||| |||||||| | |||| ||||||||    
T  11687271 ccaagttgtttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgc 11687172  T
Q  453 atacctctacg 463  Q
    || ||||||||    
T  11687171 atgcctctacg 11687161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 367 - 515
Target Start/End: Complemental strand, 26362113 - 26361967
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| |||||| |||||| |||||||||||| || | |||||| | |||| ||||  ||  ||||||||||||||||||||| |||| |||||||||||    
T  26362113 ctccagtgacaatgagctccttccaaggacgt-tc-gaggaatatcaggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcac 26362016  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| ||||||||||  |||| ||  ||| || ||||||||||||||||    
T  26362015 gagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaag 26361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 387 - 515
Target Start/End: Complemental strand, 35998698 - 35998571
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    |||||| |||||| | || |||||||||||| |||||  || || ||||||| ||| ||||||| ||| |||||||||||||| ||||||| |||| |||    
T  35998698 ttccaaagacgtacccggagaataccgggtttgatttcgag-ggaaacaacgcttgatcagtgcacatgcctctacgcacgagttggattaatcgtccac 35998600  T
Q  487 cattagtggatcagaaaccggtgtgaaag 515  Q
    | ||||||| ||||||||||||| |||||    
T  35998599 ctttagtgggtcagaaaccggtgcgaaag 35998571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 380 - 515
Target Start/End: Complemental strand, 7310838 - 7310703
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||| ||||| ||| ||||||||||||||||||  |||||||||||||  |||  | ||| |||| ||||||||||||||| ||||||||    
T  7310838 gagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagt 7310739  T
Q  480 cgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||| | || |||| || ||||||| || |||||    
T  7310738 cgctcatctttggtgggtcggaaaccgatgcgaaag 7310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 3507644 - 3507534
Alignment:
Q  404 gggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaa 503  Q
    |||||||||||||| ||||   || |||||||||  |||| |||||||||| ||||||||||||||| |||||||||| ||||| || |||| || ||||    
T  3507644 gggaataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaa 3507545  T
Q  504 ccggtgtgaaa 514  Q
    |||||| ||||    
T  3507544 ccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 41630674 - 41630512
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||||||||||||| ||||| ||||||| | ||  |||||||||||| |||  ||  |||||||||| |||  ||||||||    
T  41630674 ccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgc 41630575  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||| || |||| ||||||||||  |||| || || | || ||||| ||||||||||    
T  41630574 atgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtgtgaaag 41630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 353 - 482
Target Start/End: Original strand, 3755515 - 3755644
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||| |||||| || |||||||||||| |||||||||||  |||||||  |||  |||||||||||||  ||||||||    
T  3755515 ccaagttgcttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgc 3755614  T
Q  453 atacctctacgcacgagctggattagtcgt 482  Q
    ||  ||||||||| |||| |||||||||||    
T  3755615 atgtctctacgcatgagccggattagtcgt 3755644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 421 - 481
Target Start/End: Original strand, 7648753 - 7648813
Alignment:
Q  421 ttttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  7648753 ttttcagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcg 7648813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 367 - 515
Target Start/End: Complemental strand, 28572359 - 28572211
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| || |||| ||| | | ||||||||| ||||||||||  ||| || ||||||| |||| ||||  |||| |||||||||||    
T  28572359 ctccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcac 28572260  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| ||||||||||  |||| || |||| || |||||||||| |||||    
T  28572259 gagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 461
Target Start/End: Complemental strand, 46530032 - 46529924
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| || |||||||||| |||||||||||||||||||||| |||| || ||||| | || | ||||| ||    
T  46530032 ccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcgattctcagaggaaacaatgcttcgccagtgtgc 46529933  T
Q  453 atacctcta 461  Q
    || ||||||    
T  46529932 atgcctcta 46529924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 380 - 516
Target Start/End: Original strand, 47471804 - 47471939
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||||||||| || |||||||||||||||||||  ||| |||||||| | ||||  ||||||||| | |||||||| |||| | ||||||    
T  47471804 gagctccttccaaggacgtacctagggaataccgggttcgattcccag-gggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagt 47471902  T
Q  480 cgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    ||| |||| || |||| || ||||||| || ||||||    
T  47471903 cgtccacctttggtgggtcggaaaccgatgcgaaagt 47471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 7328812 - 7328950
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||| || ||||||||||||| | ||| ||||||||||||||||  ||| |||||||||  |||| |||||||||| ||| |||||| |||| ||||    
T  7328812 caaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggat 7328910  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  |||| || |||| ||  ||||||||| |||||    
T  7328911 tagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 7328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 416 - 515
Target Start/End: Original strand, 19146969 - 19147068
Alignment:
Q  416 ttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||||||||  ||||||||| |||| ||||| | || |||||| |||||||||||||||||||| |||| || |||| || |||||||||| |||||    
T  19146969 ttcgattttcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 19147068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 7613065 - 7612987
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||  ||| |||||||||| ||||  |||||||||    
T  7613065 caaggagctccttccaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 7650172 - 7650334
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||   |||| || ||||||| || || |||||| |||  | |||||||||||||||||||| ||| |||||||||  |||| |||| ||     
T  7650172 ccaagttgtttgggttccagtggcaaggagttcctttcaaggatgtacttagggaataccgggttcgatttccagggggaacaacacttggccagtacga 7650271  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  |||||||||||||| ||||||||||  |||| || |||| |  |||||||||| |||||    
T  7650272 atgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaag 7650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 401 - 515
Target Start/End: Original strand, 8164546 - 8164660
Alignment:
Q  401 ctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcag 500  Q
    |||||||||||||||||| ||||  |  |||||||||| |||| |||||||||| ||| ||||||||||  ||||||||||  |||| || ||||||| |    
T  8164546 ctggggaataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcgg 8164645  T
Q  501 aaaccggtgtgaaag 515  Q
    ||| ||| |||||||    
T  8164646 aaatcggcgtgaaag 8164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 387 - 481
Target Start/End: Complemental strand, 47749232 - 47749139
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    |||||||||||||||  |||||||||||||||||||   || |||||||||  |||| |||||||||| ||||||||||||||| | ||||||||    
T  47749232 ttccaaggacgtatccagggaataccgggttcgattcctag-gggaacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcg 47749139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 431 - 515
Target Start/End: Complemental strand, 15085029 - 15084945
Alignment:
Q  431 gaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||| |||| ||||| ||||||||||||| ||||||| ||||||||||  | | || ||||||| ||||||||||||||||    
T  15085029 gaacaacggttggccagtgtgcatacctctacgtacgagctagattagtcgtctatctttggtggatcggaaaccggtgtgaaag 15084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 408 - 507
Target Start/End: Original strand, 26043812 - 26043911
Alignment:
Q  408 ataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccgg 507  Q
    |||||||||||||||  ||| | |||||||  |||| |||||||||| |||||||||| |||| |||||||||| ||||| || |||  |||||||||||    
T  26043812 ataccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccgg 26043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 41219588 - 41219699
Alignment:
Q  404 gggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaa 503  Q
    |||||||||  |||||||| ||||  |||||||||||||| ||||||| || ||||| |||||||||||||||| ||  ||||| || |||||||  |||    
T  41219588 gggaataccaagttcgattctcaggaggaacaacgtttggccagtgcgtatgcctctgcgcacgagctggattaatcactcacctttggtggatcgtaaa 41219687  T
Q  504 ccggtgtgaaag 515  Q
    || ||| |||||    
T  41219688 ccagtgcgaaag 41219699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 445 - 515
Target Start/End: Complemental strand, 49021273 - 49021203
Alignment:
Q  445 cagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||| |||||||||| |||| ||||||||||| ||||||| |||| || |||||||||| |||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 49021203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 373 - 490
Target Start/End: Complemental strand, 24146470 - 24146353
Alignment:
Q  373 tgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctg 472  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||| |||| |||  |  ||||||  ||||||| | ||||| ||||||  || |||| |    
T  24146470 tgacaaggagctccttccaaggacatatctggggaatatcgggtttgattctcaaggataacaacacttggtcaatacgcatgcctctagacatgagccg 24146371  T
Q  473 gattagtcgttcaccatt 490  Q
     ||||||||| |||||||    
T  24146370 aattagtcgtccaccatt 24146353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 30045815 - 30045900
Alignment:
Q  402 tggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    |||||||||||||||||||||   || |||||||||| |||| ||||||||||  |||||||||||||   |||||||||| ||||    
T  30045815 tggggaataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacc 30045900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 504
Target Start/End: Complemental strand, 45402463 - 45402362
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    |||||||| |||||||||||   || |||||||||  | || | |||||||| |||||||||| |||| |||||||||||||||| ||||||| || |||    
T  45402463 ggggaatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaa 45402364  T
Q  503 ac 504  Q
    ||    
T  45402363 ac 45402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 402 - 490
Target Start/End: Complemental strand, 2029380 - 2029292
Alignment:
Q  402 tggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccatt 490  Q
    ||||||||| ||  ||||||||||||  | ||||||| ||||| ||| ||||| |||||||||| |||||||||||||||  |||||||    
T  2029380 tggggaataacgaattcgattttcaggagaaacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccaccatt 2029292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 353 - 481
Target Start/End: Complemental strand, 32873710 - 32873583
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||||||||||||||||| |  ||||||||| |||||||||   || | |||||||| |||  |||||| |    
T  32873710 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgta-cccgggaataccaggttcgattcctagggagaacaacgcttgaccagtgcac 32873612  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || |||||||| | ||||  |||||||||    
T  32873611 atgcctctacgtatgagccagattagtcg 32873583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 468
Target Start/End: Original strand, 49082772 - 49082884
Alignment:
Q  356 agttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcata 455  Q
    |||||||||  ||||| || || ||||||| ||| ||||||||||| ||||||||||| ||||||||  ||| | |||||||| || | ||||||||||     
T  49082772 agttgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatg 49082871  T
Q  456 cctctacgcacga 468  Q
    | ||||| |||||    
T  49082872 catctacacacga 49082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 2668093 - 2668148
Alignment:
Q  440 ttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtgg 495  Q
    |||| |||||||||| |||||||||| ||||||||||||||| ||||| |||||||    
T  2668093 ttggccagtgcgcatgcctctacgcaagagctggattagtcgctcacctttagtgg 2668148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 355 - 438
Target Start/End: Complemental strand, 30735105 - 30735022
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacg 438  Q
    ||||||||||  ||| | || |||||||||||||||||||||| |   ||||||||||| |||||||| |||| ||||||||||    
T  30735105 aagttgtttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgattctcagggggaacaacg 30735022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 38394312 - 38394175
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||  |||||||||||||||||  ||||||| ||||||||| |||| || ||||||| | || ||||||| ||   |||||||| |||| ||||    
T  38394312 caaggagcttcttccaaggacgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtttctacgcatgagccggat 38394215  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||   ||||| | |||| ||||| |||||||||||||    
T  38394214 tagtcacccaccagtggtgggtcagagaccggtgtgaaag 38394175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 456 - 515
Target Start/End: Original strand, 47164154 - 47164213
Alignment:
Q  456 cctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||||||||||| |||||||||| ||| | || ||||||| ||||||||||||||||    
T  47164154 cctctacgcacgagccggattagtcgctcatctttggtggatcggaaaccggtgtgaaag 47164213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 353 - 479
Target Start/End: Original strand, 4638099 - 4638225
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || || || ||||||| || ||  |||||||||||| || ||||   |||||||||  |||  | ||||||| |||  ||||||||    
T  4638099 ccaagttgtttggacttcagtggcaaggagttccttttaaggacgtatcttggaaataataggttcgattcccaggagaaacaacgcttgaccagtgcgc 4638198  T
Q  453 atacctctacgcacgagctggattagt 479  Q
    |||||||||||||||||| ||||||||    
T  4638199 atacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 477
Target Start/End: Original strand, 7139735 - 7139821
Alignment:
Q  391 aaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||||||||||  |||||||||||||||||||  ||| ||||||| |  |||  |||||  |||| |||||||||||||||||||||    
T  7139735 aaggacgtatccagggaataccgggttcgattcccagagggaacatcacttgaccagtgtacatatctctacgcacgagctggatta 7139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 411 - 509
Target Start/End: Complemental strand, 24506751 - 24506654
Alignment:
Q  411 ccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||||||||||||||| || ||||||| |||  |||||| ||| |||||||||| |||   ||||||||| |||||||| |||| || ||||||||||    
T  24506751 ccgggttcgattttcag-ggaaacaacgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtg 24506654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 39849031 - 39849144
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| |||||||||||||    ||||||  |||||||||||  |||  ||||||||| |||| ||||| |||| ||||||||||     
T  39849031 ctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcccag-aggaacaacgcttggccagtgtgcatgcctctacgcat 39849129  T
Q  467 gagctggattagtcg 481  Q
    |||| ||||||||||    
T  39849130 gagccggattagtcg 39849144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 373 - 462
Target Start/End: Original strand, 6286090 - 6286178
Alignment:
Q  373 tgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctac 462  Q
    ||||||||||||| ||||||||| ||||| |||||||||| | |||||||| |||  ||||||||  || | |||||||||| |||||||    
T  6286090 tgacaaggagctccttccaaggaagtatcaggggaataccagattcgatttccagaaggaacaacactt-gacagtgcgcatgcctctac 6286178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 481
Target Start/End: Original strand, 28242250 - 28242351
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| |||||| |||||||| || |||||||||||| ||||  |||  ||||||| |||||| |||||| ||| |||||| ||| |||  ||||||||    
T  28242250 gagctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgcacatgcctctatgcatgaggcggattagt 28242349  T
Q  480 cg 481  Q
    ||    
T  28242350 cg 28242351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 454
Target Start/End: Complemental strand, 37092667 - 37092566
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||  ||||||||||||| | | |||||| ||| || ||||| ||  ||||||||||||||| ||||||||    
T  37092667 ccaagttgcttgggctccagtggcaaggagcttcttccaaggacgtacccgtggaatatcggattagatttccaaggggaacaacgtttggccagtgcgc 37092568  T
Q  453 at 454  Q
    ||    
T  37092567 at 37092566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 482
Target Start/End: Complemental strand, 47303627 - 47303522
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||  ||||||||||||||| ||  |||| |||||| ||||  |||  ||||||||  ||||||||||| ||| ||||||| || |||| |||||    
T  47303627 aaggagctttttccaaggacgtatccggaaaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctctacacatgagccggatt 47303528  T
Q  477 agtcgt 482  Q
    ||||||    
T  47303527 agtcgt 47303522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 509
Target Start/End: Complemental strand, 50405686 - 50405609
Alignment:
Q  432 aacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||||| |||  |||||||||| ||||||||||||||  ||||||||||  ||||||| |||| || ||||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtg 50405609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 354 - 418
Target Start/End: Complemental strand, 11249907 - 11249843
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttc 418  Q
    |||||||||||  ||||||||||||| || |||||||||||| |||| ||| |||||||| ||||    
T  11249907 caagttgtttggactccaatgacaagaagttcattccaaggatgtatttggagaataccgagttc 11249843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 380 - 504
Target Start/End: Complemental strand, 25515882 - 25515759
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| || ||||||||||  | ||||||||||||||| |||   || |||||||| ||||||  ||||  ||| | |||||| | ||| |||||||||    
T  25515882 gagctcctttcaaggacgtacatagggaataccgggttctattactag-gggaacaatgtttggctagtgtacatgcttctacgtatgagttggattagt 25515784  T
Q  480 cgttcaccattagtggatcagaaac 504  Q
    || |||||||||||||||| |||||    
T  25515783 cgctcaccattagtggatcggaaac 25515759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 373 - 509
Target Start/End: Complemental strand, 40660469 - 40660333
Alignment:
Q  373 tgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctg 472  Q
    ||||||| ||||| ||| || ||  |||| ||| |||||||| |||||||   ||  |||||||| |||||||||||||||| |||||||||| || | |    
T  40660469 tgacaagaagctccttctaaagagttatccgggaaataccggattcgattcctaggaggaacaacatttggtcagtgcgcatgcctctacgcatgaaccg 40660370  T
Q  473 gattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||| || |||||| || |||| ||  |||||||||    
T  40660369 gattaatcattcacctttggtgggtcgaaaaccggtg 40660333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 422
Target Start/End: Complemental strand, 11025500 - 11025465
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||||||||||||||||||||| |||||||||    
T  11025500 ttccaaggacgtatctggggaataccaggttcgatt 11025465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 26923400 - 26923261
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| || ||| ||||||| |  |||||| ||| ||||||||| || |  ||||||||||| ||||||||||| | | ||| ||||||  ||||    
T  26923400 caaggagctcctttcaatgacgtatttaaggaatatcggattcgatttttagggaaaacaacgtttgatcagtgcgcatgcatatacacacgagtcggat 26923301  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || | || ||  ||| |||| ||||||||||||| |||||    
T  26923300 taattgtccattattggtgggtcagaaaccggtgcgaaag 26923261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 508
Target Start/End: Complemental strand, 43330802 - 43330739
Alignment:
Q  445 cagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggt 508  Q
    |||||||||| ||||||||||||||| ||||||||||  |||| || |||| ||| ||||||||    
T  43330802 cagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggt 43330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 515
Target Start/End: Complemental strand, 15285835 - 15285733
Alignment:
Q  413 gggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtga 512  Q
    |||||| ||||| ||  |||| ||| ||| || ||||||||| ||||||| ||  || ||||||||||||||||| ||  ||||||||||| ||||| ||    
T  15285835 gggttcaatttttaggaggaataacatttcgttagtgcgcatgcctctacacataagttggattagtcgttcacctttgatggatcagaaatcggtgaga 15285736  T
Q  513 aag 515  Q
    |||    
T  15285735 aag 15285733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 502
Target Start/End: Original strand, 40944851 - 40944976
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||| ||||| |||||||||||||||  | |||||||| ||||||||  ||| |||||||||  ||   ||||  |||| |||||||||| |||| ||||    
T  40944851 caagaagctccttccaaggacgtatccagagaataccgagttcgattcccagggggaacaacacttaaccagtatgcatgcctctacgcatgagc-ggat 40944949  T
Q  476 tagtcgttcaccattagtggatcagaa 502  Q
    |||||| ||||| || |||| ||||||    
T  40944950 tagtcgctcacctttggtgggtcagaa 40944976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 451 - 509
Target Start/End: Complemental strand, 50753405 - 50753347
Alignment:
Q  451 gcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||| ||||||||||||||  |||||||||||||| |||| |||| || ||||||||||    
T  50753405 gcatgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtg 50753347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 33560828 - 33560869
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggtt 417  Q
    |||||||||| ||||||||| ||| |||||||||||||||||    
T  33560828 caaggagctccttccaaggatgtacctggggaataccgggtt 33560869  T

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Target: chr6 (Bit Score: 83; Significance: 8e-39; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 21898597 - 21898759
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||  |||  ||||||||| |||| ||||||||    
T  21898597 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgc 21898696  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||||||||||||| ||||||| || |||||||||| |||||    
T  21898697 atgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 21898759  T

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Target: chr6; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 6606235 - 6606096
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||  |||| |||||  ||| |||||||||| |||| ||||    
T  6606235 caaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggat 6606136  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| ||||||| |||| || |||||||||| |||||    
T  6606135 tagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

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Target: chr6; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 354 - 515
Target Start/End: Complemental strand, 13036164 - 13036003
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    ||||||| |||  ||||| || |||||||||| ||||||||||||||  |||||||| |||||||||||||||| |||||||||  |||| |||||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgca 13036065  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    | |||||||||| ||||  |||||||||| ||| ||| |||| || |||||||||| |||||    
T  13036064 tgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaag 13036003  T

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Target: chr6; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 353 - 508
Target Start/End: Complemental strand, 9179897 - 9179742
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||||||||||||||||| |  |||||||||||||||||||  ||| |||||||||  |||  ||||  ||    
T  9179897 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgc 9179798  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggt 508  Q
    ||||||||||||| |||||||||||||||| |||| || ||||||| |||| ||||    
T  9179797 atacctctacgcatgagctggattagtcgtccacctttggtggatcggaaatcggt 9179742  T

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Target: chr6; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 34954757 - 34954646
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||| |||| ||||||||||||||| |||||| |||||||||||||| ||||  |||    
T  34954757 caaggagctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagat 34954658  T
Q  476 tagtcgttcacc 487  Q
    ||||||| ||||    
T  34954657 tagtcgtccacc 34954646  T

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Target: chr6; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 5253384 - 5253222
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  |||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  5253384 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 5253285  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||| |||  |||| || |||| || |||||||||| |||||    
T  5253284 atgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaag 5253222  T

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Target: chr6; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 495
Target Start/End: Complemental strand, 19230718 - 19230578
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| || ||||||||||| |||||||||||  |||||||||| |||||||||  ||    
T  19230718 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgta-ctcgggaataccggattcgattttcaa-gggaacaacgcttggtcagtatgc 19230621  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtgg 495  Q
    || ||||||||||||||| |||||||||||||| |||| ||||    
T  19230620 atgcctctacgcacgagccggattagtcgttcatcattggtgg 19230578  T

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Target: chr6; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 380 - 481
Target Start/End: Original strand, 12606406 - 12606507
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||| ||||||| |||||||||| | |||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  12606406 gagctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagt 12606505  T
Q  480 cg 481  Q
    ||    
T  12606506 cg 12606507  T

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Target: chr6; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 495
Target Start/End: Complemental strand, 10311607 - 10311488
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||  |||  |||||||||| |||| ||||||||||  ||||||||||||| | |||    
T  10311607 caaggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgcacgagttagat 10311508  T
Q  476 tagtcgttcaccattagtgg 495  Q
    |||||| |||||||| ||||    
T  10311507 tagtcgctcaccattggtgg 10311488  T

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Target: chr6; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 13468905 - 13469044
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||||| |||||||||| ||||| |||   || |||||||||| ||||||||||| ||| |||||||||||||||  |||    
T  13468905 caaggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagat 13469004  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  ||||||| |||| |  |||||||||| |||||    
T  13469005 tagtcgcccaccattggtgggttggaaaccggtgcgaaag 13469044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 14107519 - 14107357
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||  ||||||||||||||||||||  |||  ||||||||| |||  |||||| |    
T  14107519 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcac 14107420  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| ||||||||||  ||  |||||||| || |||||||||| |||||    
T  14107419 atgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaag 14107357  T

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Target: chr6; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 505
Target Start/End: Complemental strand, 2271462 - 2271312
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||  |||||||||||||||||||| |||  | |||||||| || | ||||||||    
T  2271462 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctca--gagaacaacgcttagccagtgcgc 2271365  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaacc 505  Q
    ||  |||||||||||||| ||||||||||| |||| ||  ||| |||||||||    
T  2271364 atgtctctacgcacgagccggattagtcgtccacctttgatgggtcagaaacc 2271312  T

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Target: chr6; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 30788989 - 30788852
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||| ||||| |||||||| |||||| |||| |||   |||||||||||||| |||||||||| |||||| |||||||| ||||    
T  30788989 caaggagctccttccaaggatgtatccggggaatatcgggtttgattctcat--ggaacaacgtttggccagtgcgcatgcctctaggcacgagccggat 30788892  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  |||| || |||| || |||||||||| |||||    
T  30788891 tagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 380 - 515
Target Start/End: Original strand, 3601060 - 3601195
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||  ||||||  |||||||||||| ||||||| |||| |||||||||| |||| |||||||||| ||| ||| ||||||| ||||||||    
T  3601060 gagctctttccaaatacgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagt 3601159  T
Q  480 cgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||| |||| || |||| || |||||||||| |||||    
T  3601160 cgtccacctttggtgggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 367 - 478
Target Start/End: Complemental strand, 9366570 - 9366459
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| ||||||||||||| ||||||||| |||  ||||||||| | ||||||||||| || ||||| |||| |||| |||||||||| |||||||||||    
T  9366570 ctccagtgacaaggagctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctctacgcac 9366471  T
Q  467 gagctggattag 478  Q
    |||| |||||||    
T  9366470 gagccggattag 9366459  T

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Target: chr6; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 19089470 - 19089609
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||||||||| |||||||||||| | |||||||| |||| ||||  ||| |||||||||  |||| ||||| |||| ||||||||||||||| ||||    
T  19089470 caaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggat 19089569  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||  ||| || |||| || |||||||||| |||||    
T  19089570 tagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 8612135 - 8611973
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||   ||  ||||||||| |||  ||||| ||    
T  8612135 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgc 8612036  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || | |||||||| || | ||||||||||  |||| || |||| ||||||||||||| |||||    
T  8612035 atgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 29333299 - 29333166
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || ||| |||||| ||||||||||||| |  |||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  29333299 ccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatttccag-gggaacaacgtttggccagtgcgc 29333201  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||||||| |||| | || |||||| ||||    
T  29333200 atgcctctacgcatgagccgaatcagtcgtccacc 29333166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 8932610 - 8932734
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||| ||||| || ||||||| || ||||||||| ||||| |||||||| |||||||||||  ||| |||||||||  ||||  |||||||    
T  8932610 ccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgc 8932709  T
Q  453 atacctctacgcacgagctggatta 477  Q
    || |||||||||| |||| ||||||    
T  8932710 atgcctctacgcatgagccggatta 8932734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 8944076 - 8944200
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||| ||||| || ||||||| || ||||||||| ||||| |||||||| |||||||||||  ||| |||||||||  ||||  |||||||    
T  8944076 ccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgc 8944175  T
Q  453 atacctctacgcacgagctggatta 477  Q
    || |||||||||| |||| ||||||    
T  8944176 atgcctctacgcatgagccggatta 8944200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 376 - 479
Target Start/End: Complemental strand, 29444903 - 29444800
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||| |||||| | |||| ||||||||||||||||  || |||||||||| |||| |||||||||| |||||||||| |||| ||||    
T  29444903 caaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggat 29444804  T
Q  476 tagt 479  Q
    ||||    
T  29444803 tagt 29444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 12635792 - 12635925
Alignment:
Q  382 gctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    |||| ||||||||||||||| |||||||||| |||| ||||  ||| || ||||||| ||||  ||||||||| ||||||||||| ||| ||||||||||    
T  12635792 gctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcg 12635891  T
Q  482 ttcaccattagtggatcagaaaccggtgtgaaag 515  Q
      ||| ||| |||| || |||||||||| |||||    
T  12635892 cccactattggtgggtcggaaaccggtgcgaaag 12635925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 354 - 482
Target Start/End: Original strand, 9147251 - 9147379
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||||| ||  ||||||||||||||||||||||| |||||||||| |||||||||||  ||| |||||| ||  |||  |||||| ||    
T  9147251 caagttgtttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggggaacgacacttgaccagtgcaca 9147350  T
Q  454 tacctctacgcacgagctggattagtcgt 482  Q
    | ||||||||||  ||| |||||||||||    
T  9147351 tgcctctacgcataagccggattagtcgt 9147379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 355 - 482
Target Start/End: Complemental strand, 3588104 - 3587977
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||| | || ||||||| | ||||||| |||||||| || |||||||||||||||||  ||  |||||||||| |||| |||||| |||    
T  3588104 aagttgtttgggctcaagtggcaaggagtttattccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacat 3588005  T
Q  455 acctctacgcacgagctggattagtcgt 482  Q
    ||||||||||| || | |||||||||||    
T  3588004 acctctacgcatgaaccggattagtcgt 3587977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 24672027 - 24671864
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| || ||||||||||||||| ||||||||||||| |||  ||| |||||||||  |||  ||||| ||    
T  24672027 ccaagttgcttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgc 24671928  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    || ||||||||||| ||| |||||||| || | || ||  ||| || |||| ||||||||||||    
T  24671927 atgcctctacgcacaagccggattagtagtccgcctttgatggttcggaaatcggtgtgaaagt 24671864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 32157314 - 32157167
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| ||| ||||||||| ||| |||||| ||| | ||||||| | ||||  ||||| || |||||||||  |||  |||||||||||||||||||||     
T  32157314 ctccactgataaggagctccttctaaggacatatttagggaatatcaggtttaatttttagagggaacaacacttgaccagtgcgcatacctctacgcat 32157215  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    ||||  |||||||| | || | || |||||||||||||||||||||||    
T  32157214 gagccagattagtcatccatctttggtggatcagaaaccggtgtgaaa 32157167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 353 - 438
Target Start/End: Complemental strand, 3030779 - 3030694
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacg 438  Q
    ||||||||||||  ||||| || ||||||||||||||||||||||||| | ||||||| |||||||||||  ||| ||||||||||    
T  3030779 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtatttcgggaatatcgggttcgattcccagggggaacaacg 3030694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 5029825 - 5029894
Alignment:
Q  412 cgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    ||||||||||| |||| | |||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  5029825 cgggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcg 5029894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 373 - 465
Target Start/End: Original strand, 11142572 - 11142664
Alignment:
Q  373 tgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgca 465  Q
    ||||||| |||||||||||||||| || | ||| ||||||| ||||||||  |||||| |||||||||||  |||||||||| ||||||||||    
T  11142572 tgacaagaagctcattccaaggacatacccgggaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctctacgca 11142664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 13391289 - 13391363
Alignment:
Q  406 gaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    ||||| ||| |||||||||||| |||||||| |||||| |||||||||| ||||||||||||||| ||||||||||    
T  13391289 gaatatcggattcgattttcag-gggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcg 13391363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 8938660 - 8938822
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||||||||||||| |||||| ||| |||| |||||||||  |||||||||  |||  ||||||||  |||  ||||||||    
T  8938660 ccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgc 8938759  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |  | |||||||| |||| | ||||||||| |||| ||  ||| || |||||||||| |||||    
T  8938760 aagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 8938822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 487
Target Start/End: Original strand, 8888869 - 8888965
Alignment:
Q  391 aaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    |||||||||||  ||||||| ||  ||||||||| |  || |||||||||||| ||||||||||||||||||||| |||  ||||||||||| ||||    
T  8888869 aaggacgtatccagggaatatcgaattcgatttttaagggaaacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacc 8888965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 431 - 515
Target Start/End: Complemental strand, 9633708 - 9633624
Alignment:
Q  431 gaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||| |||| |||||||||| ||||||||||||||| ||||||||||  |||| || |||| || |||||||||| |||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 4596106 - 4596172
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttgg 443  Q
    ||||||||| || |||||||||||  |||||||| | |||||||||||||| |||||||||||||||    
T  4596106 aaggagctcctttcaaggacgtattcggggaatatcaggttcgattttcagggggaacaacgtttgg 4596172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 15643989 - 15643832
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||||  ||| |||||||||  | || || |||||    
T  15643989 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatct-gggaataacgggttcgattcacag-gggaacaacactaggccaatgcgc 15643892  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    |    |||||||| |||  ||||||||||  |||| ||||||| ||  |||||||| |||||||    
T  15643891 a----tctacgcatgagtcggattagtcgcccacctttagtgggtcgaaaaccggtatgaaagt 15643832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 33859426 - 33859368
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgca 465  Q
    |||||||||||||||||| || ||||||||||||||  |||||||||| ||||||||||    
T  33859426 aataccgggttcgatttttagggggaacaacgtttgcccagtgcgcatgcctctacgca 33859368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 515
Target Start/End: Complemental strand, 14783488 - 14783419
Alignment:
Q  446 agtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| |||| |||||||||| |||| ||||||||||| ||||||| |||| || |||||||||| |||||    
T  14783488 agtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 14783419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 21016912 - 21016843
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||| |||  ||||| || |||||||||| ||||| ||||||| | ||||||||||||||||||||    
T  21016912 ccaagttgcttgggctccagtggcaaggagctccttccagggacgtacccggggaataccgggttcgatt 21016843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 26476499 - 26476434
Alignment:
Q  378 aggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttgg 443  Q
    |||||||| ||||||||||||| |||| ||||| ||||| ||||||||||  ||||||||| ||||    
T  26476499 aggagctccttccaaggacgtacctggagaatatcgggtacgattttcaggaggaacaacgcttgg 26476434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 459
Target Start/End: Original strand, 32048402 - 32048506
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| ||  ||||||||| ||||||||| |||   | |||||| | | |||||||||||| | ||||||||||||||||||| ||||    
T  32048402 aagttgtttggactccagtggtaaggagctccttccaaggatgtactcgaggaatatcagattcgattttcagggagaacaacgtttggtcagtgtgcat 32048501  T
Q  455 acctc 459  Q
     ||||    
T  32048502 gcctc 32048506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 353 - 505
Target Start/End: Original strand, 9793 - 9945
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||||||   ||||| ||||||||||||| ||||||||| ||||||| |||||||||| |||||||| ||| |||||||||| |||| ||||||||    
T  9793 ccaagttgttttgactccagtgacaaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgc 9892  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaacc 505  Q
    || ||||||||||||||| ||||||||||| |||| || |||| |||||||||    
T  9893 atgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaacc 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 1e-37; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 367 - 515
Target Start/End: Complemental strand, 25540551 - 25540403
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||   || |||||||||| |||| |||||||||| |||||||||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcac 25540452  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| ||||||||||| |||| || |||| || |||||||||| |||||    
T  25540451 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 7747219 - 7747381
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||   ||  |||||||||||||| ||||| ||    
T  7747219 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgc 7747318  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||||||||||||| ||||||| || |||||||||| |||||    
T  7747319 atgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 11069823 - 11069985
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||||||   |||||||| | |||||||||||||||||||||| | |||||||||| |||||||||   || ||||||||||||||| ||||||||    
T  11069823 ccaagttgttttggctccaatggctaggagctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgc 11069922  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||||||||||||| ||||||||| |||| || |||| || ||||||| || |||||    
T  11069923 atacctctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaag 11069985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 38962708 - 38962870
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||  |||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||| |||| ||||||||    
T  38962708 ccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgc 38962807  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| || | ||||||||||| |||| || |||| |||||||| |||| |||||    
T  38962808 atgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaag 38962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 12864169 - 12864332
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||||||||||||| |||||| |||||||  |||||||||||| |||||||| ||| |||||||||  |||||||||||||    
T  12864169 ccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgc 12864268  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    || ||||| |||| ||||  |||||||||| ||||||| |||| || |||||||||| ||||||    
T  12864269 atgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagt 12864332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 353 - 490
Target Start/End: Original strand, 34356151 - 34356288
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||    
T  34356151 ccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgc 34356250  T
Q  453 atacctctacgcacgagctggattagtcgttcaccatt 490  Q
    || |||||| ||| |||| |||||| |||| |||||||    
T  34356251 atgcctctatgcatgagccggattaatcgtgcaccatt 34356288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 356 - 515
Target Start/End: Complemental strand, 6358309 - 6358150
Alignment:
Q  356 agttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcata 455  Q
    |||||||||  ||||| || |||| ||||||||| ||||||||||| |||||||||| | |||||||| ||| |||||||||  |||| ||||||||||     
T  6358309 agttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatg 6358210  T
Q  456 cctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||| |||| ||||||||||| ||||||| |||| ||  |||||||||||||||    
T  6358209 cctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaag 6358150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 354 - 509
Target Start/End: Original strand, 21286390 - 21286545
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||| ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||  |||  | ||||||| |||  |||||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgca 21286489  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    | |||||||||||||||||||||||||  ||| |||| |||| |  ||||||||||    
T  21286490 tgcctctacgcacgagctggattagtcactcatcattggtgggttggaaaccggtg 21286545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 41220603 - 41220742
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||  |||  ||||||||| |||| |||||||||| |||||||||| |||| | ||    
T  41220603 caaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaat 41220702  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||||| ||||||| || |||||||||| |||||    
T  41220703 tagtcgttcacctttagtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 354 - 487
Target Start/End: Complemental strand, 3849074 - 3848941
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    ||||||| |||| ||||| ||| |||||| ||||| ||||||||||||||| ||||||||||||||||| |||| || |||||||||||| ||| |||||    
T  3849074 caagttgcttgagctccagtgataaggagttcatttcaaggacgtatctggagaataccgggttcgattatcaggggaaacaacgtttggccagggcgca 3848975  T
Q  454 tacctctacgcacgagctggattagtcgttcacc 487  Q
    |  |||||||||||||  ||||||||||||||||    
T  3848974 tgtctctacgcacgagtcggattagtcgttcacc 3848941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 10026777 - 10026615
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  |||||||| |||||||||| |||||||||||||   ||  |||||||||||||||| |||| ||||||||||||||| ||||||||    
T  10026777 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgc 10026678  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| ||||||||||  |||| || |||| || |||||  |||||||||    
T  10026677 atgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaag 10026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 354 - 515
Target Start/End: Original strand, 37560119 - 37560280
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||||| ||  ||| ||||| ||||||||||||| | | |||||||| ||||||||| |||  |||||||||||||||||||||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgca 37560218  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    | ||||||||||||||| |||||| |||| |||| ||  ||| ||  |||||||||||||||    
T  37560219 tgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaag 37560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 353 - 465
Target Start/End: Complemental strand, 19976968 - 19976856
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||| |||||||  ||||| || |||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19976968 ccaaattgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgc 19976869  T
Q  453 atacctctacgca 465  Q
    ||  |||||||||    
T  19976868 atgtctctacgca 19976856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 14169770 - 14169607
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |||||||||| || ||||||||||||||  |||||||| ||||||||||| || | |||||||||  |||  ||||||||    
T  14169770 ccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgc 14169671  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    ||  ||||||||| |||| |||||||||||  |||||| |||| || |||||||||| ||||||    
T  14169670 atgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaagt 14169607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 377 - 487
Target Start/End: Complemental strand, 3644024 - 3643914
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||  |   ||||||||| |||| |||||||||| |||||||||| ||||||||||    
T  3644024 aaggagctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatgagctggatt 3643925  T
Q  477 agtcgttcacc 487  Q
    |||||| ||||    
T  3643924 agtcgtccacc 3643914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 377 - 515
Target Start/End: Original strand, 10823029 - 10823167
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||| ||||||||||||| | ||||||||||||||| ||||  |||  ||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  10823029 aaggagctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 10823128  T
Q  477 agtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||  |||| || |||| || |||||||||| |||||    
T  10823129 agtcgcccaccttttgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 354 - 515
Target Start/End: Complemental strand, 28616540 - 28616378
Alignment:
Q  354 caagttgtttgacctccaatgacaa-ggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||||||  ||||| |||||| ||| ||| |||||||||| |||| | |||||| |||||||||||||||| ||||| |||  |||| ||||||||    
T  28616540 caagttgtttggactccagtgacaaaggaactccttccaaggacatatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgc 28616441  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||||||||  |||||||||  || | ||||||| ||||||||||||| |||||    
T  28616440 atgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaaag 28616378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 38005347 - 38005509
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | ||||||||| ||||||||||  ||  |||||||||| |||| ||||||||    
T  38005347 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgc 38005446  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||| || |||| ||||||||||  |||| || ||||||| ||||| |||| |||||    
T  38005447 atgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 378 - 515
Target Start/End: Original strand, 44139454 - 44139591
Alignment:
Q  378 aggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||| ||| ||||||||| | ||||||||||||||||||||||||  ||| |||||||||| |||| |||||||| | ||||||||||||||| ||||||    
T  44139454 aggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggatta 44139553  T
Q  478 gtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||  ||||| | |||| || |||||||||| |||||    
T  44139554 gtcgcccaccaatggtgggtcggaaaccggtgcgaaag 44139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 403 - 515
Target Start/End: Original strand, 12455305 - 12455417
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    ||||||||||||||||||||| ||| || ||||||| || | |||||||||| ||||||||||||||| |||||||||| |||||||| |||| || |||    
T  12455305 ggggaataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaa 12455404  T
Q  503 accggtgtgaaag 515  Q
    ||||||| |||||    
T  12455405 accggtgcgaaag 12455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 9360886 - 9360747
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||| ||||||||||||||||| | |||||||||| |||||||||   || || |||||||||||| |||||||||| ||||||||||||||| | ||    
T  9360886 caaggatctcattccaaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaat 9360787  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  |||| |||||||  | |||||||||| |||||    
T  9360786 tagtcgcccacctttagtgggccggaaaccggtgcgaaag 9360747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 29422160 - 29422322
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |  |||||||||| || |||||||||| | ||||||||| ||||||||||| ||| |||||||||  |||| || || ||    
T  29422160 ccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagc 29422259  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||| ||||||||||| ||||||||||| |||| ||  |||||| |||| ||||| |||||    
T  29422260 atacctttacgcacgagccggattagtcgtccacctttgatggatcggaaatcggtgcgaaag 29422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 373 - 515
Target Start/End: Complemental strand, 34346428 - 34346286
Alignment:
Q  373 tgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctg 472  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||| |||||||||  |||| ||||| |||| |||||||||| |||       
T  34346428 tgacaaggagctcattccaaggacgtacctggggaatactgggtttgattatcagggggaacaacacttggccagtgtgcatgcctctacgcatgagtca 34346329  T
Q  473 gattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||| ||| ||||| || |||| || |||||||||| |||||    
T  34346328 gattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 34346286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 377 - 515
Target Start/End: Original strand, 35946708 - 35946845
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||||   || |||||||||| |||| || || |||| ||||||||||||||| |||||    
T  35946708 aaggagctcattctaaggacgtatccggggaataccgagttcgattcctag-gggaacaacgcttggccattgtgcatgcctctacgcacgagccggatt 35946806  T
Q  477 agtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||| ||||||| |||| || ||||| |||| |||||    
T  35946807 agtcgtccaccattggtgggtcggaaactggtgcgaaag 35946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 514
Target Start/End: Complemental strand, 10046637 - 10046477
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  |||||||| |||||||||| ||||||| ||||||| || ||||||||||||||||| |||  || |||||||||| | ||||||||    
T  10046637 ccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgttt-gacagtgcgc 10046539  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    || |||||||||| |||| ||||||||||  |||| || |||| || |||||  ||||||||    
T  10046538 atgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaa 10046477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 376 - 509
Target Start/End: Complemental strand, 39201646 - 39201513
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||||||||||   | |||||||||  ||||||| |||| |||||||| |||||| ||||| |||| |||||||||| |||| ||||    
T  39201646 caaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggat 39201547  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||||||||||| || |||| || ||||||||||    
T  39201546 tagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 8410076 - 8410204
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | || ||||| |||||||||||  ||| |||||||||  |||| ||||||||    
T  8410076 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgc 8410175  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||||||| ||||||||||    
T  8410176 atgcctctacgcacgagccggattagtcg 8410204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 353 - 480
Target Start/End: Complemental strand, 13026572 - 13026445
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||| ||||| || |||||| ||| |||||||||||||||  ||||||| ||||||||||| ||||  ||||||| | |||| ||||||||    
T  13026572 ccaagttgattgaactccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgc 13026473  T
Q  453 atacctctacgcacgagctggattagtc 480  Q
    || |||||||||| |||| |||||||||    
T  13026472 atgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 377 - 515
Target Start/End: Original strand, 16034906 - 16035044
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||| ||| ||||||||||||||| | |||||||||||||||||||||||  ||||||||| |||  ||||| |||| ||| |||| |||||| |||||    
T  16034906 aaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggatt 16035005  T
Q  477 agtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||| ||||||||  ||  || |||||||||| |||||    
T  16035006 agtcgctcaccattgatgagtcggaaaccggtgcgaaag 16035044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 22593080 - 22593213
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | ||||||||| | ||||||||  ||| |||||||||| |||| ||||||||    
T  22593080 ccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgc 22593178  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||||||| |||| ||||||||||| ||||    
T  22593179 atgcctctacgcatgagccggattagtcgtccacc 22593213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 42770812 - 42770678
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||| |||||| ||||||||||||||| | | |||||||||||| ||| |||| |||||||||| |||| ||||||||    
T  42770812 ccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgc 42770713  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || ||||| ||||||||| |||||| |||| ||||    
T  42770712 atgcctcttcgcacgagccggattaatcgtccacc 42770678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 358 - 515
Target Start/End: Original strand, 34722631 - 34722787
Alignment:
Q  358 ttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacc 457  Q
    |||||||  ||||| ||||||||||||| ||||||||||||| |    |||||  |||||||||| |||| | |||||||| ||||||||||| |||  |    
T  34722631 ttgtttgggctccagtgacaaggagctccttccaaggacgtaccaaatgaatat-gggttcgattctcagggagaacaacgcttggtcagtgcacatgtc 34722729  T
Q  458 tctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||||||||| ||||||||||  |||| ||  ||||||||||||||||| |||||    
T  34722730 tctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgcgaaag 34722787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 331446 - 331574
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||| |||||| ||||||||||||| | ||||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  331446 ccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 331545  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || | |||||||| |||| ||||||||||    
T  331546 atgcttctacgcatgagccggattagtcg 331574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 353 - 514
Target Start/End: Complemental strand, 20612697 - 20612534
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttca-gtgggaacaacgtttggtcagtgcg 451  Q
    |||||||| |||  ||||| || |||||||||| ||||||||  ||||  |||||||||||||||||||| ||| | |||||||||  |||| |||||||    
T  20612697 ccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcg 20612598  T
Q  452 catacctctacgcacgag-ctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    ||| |||||| ||| ||| | ||||||||||| ||||||| |||| || |||||||||| ||||    
T  20612597 catgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 44945562 - 44945700
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||||||||||   || |||||| ||||| ||||  ||| || ||||||| ||||  ||||||||| ||||||||||||||| ||||    
T  44945562 caaggagctccttccaaggacgtactcggagaatactgggtttgattcccagagg-aacaacgcttggatagtgcgcatgcctctacgcacgagccggat 44945660  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  |||| |||||||||| |||||||||| |||||    
T  44945661 tagtcgcccacctttagtggatcggaaaccggtgcgaaag 44945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 477
Target Start/End: Complemental strand, 45263827 - 45263704
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||  ||||| || |||||||||| || |||  |  |||| ||||||||||||||||||||  ||| |||||||||| |||| |||||||||    
T  45263827 caagttgtttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgca 45263728  T
Q  454 tacctctacgcacgagctggatta 477  Q
    | ||||||||||||||| ||||||    
T  45263727 tgcctctacgcacgagccggatta 45263704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 3811852 - 3811690
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || ||||| |||||| ||| |||||||||||||   | |||||| |||||||||||  ||| |||||||||  ||||||| |||||    
T  3811852 ccaagttgtttggtcttcaatggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgc 3811753  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||| |||  |||| || |||| |||||||||| || |||||    
T  3811752 atgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaag 3811690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 18902691 - 18902529
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| |||||||||||||   ||||||||||||||||||||  ||  |||||||||| |||  ||||||||    
T  18902691 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgc 18902592  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
     |  ||||||||||||||  |||||||||  |||| || |||| || |||||||||| |||||    
T  18902591 gtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 377 - 509
Target Start/End: Original strand, 10669561 - 10669693
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||| ||| ||||||||||||| ||||||  ||||||||| ||||  ||| | |||||||| |||| ||||||||||  |||||||||||||  |||||    
T  10669561 aaggatctccttccaaggacgtacctgggggctaccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggatt 10669660  T
Q  477 agtcgttcaccattagtggatcagaaaccggtg 509  Q
    | ||||||||| || |||| || ||||||||||    
T  10669661 aatcgttcacctttggtgggtcggaaaccggtg 10669693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 377 - 485
Target Start/End: Complemental strand, 15234198 - 15234090
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||| ||||||||||||| | |||||||||  ||||||||| |||| |||||||||  |||  |||||||||| ||||||||||| || | ||||    
T  15234198 aaggagctccttccaaggacgtacccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcatgcctctacgcacaagttagatt 15234099  T
Q  477 agtcgttca 485  Q
    |||||||||    
T  15234098 agtcgttca 15234090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 367 - 482
Target Start/End: Original strand, 25549687 - 25549802
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||| |||||| |||||||||| |||||||||| | || |  |||||| |||||  ||||| ||| |||||||||||    
T  25549687 ctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgcac 25549786  T
Q  467 gagctggattagtcgt 482  Q
    |||| |||||||||||    
T  25549787 gagccggattagtcgt 25549802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 7787015 - 7787129
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||| ||| || | |||||||| | ||||||||||||||||||||| ||| ||||||||   |||| |||| ||||| |||||||||||    
T  7787015 ctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcac 7787114  T
Q  467 gagctggattagtcg 481  Q
    |||| ||||||||||    
T  7787115 gagccggattagtcg 7787129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 390 - 516
Target Start/End: Complemental strand, 39807009 - 39806883
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    |||||||||| | ||||||||||||||||||||  ||   | |||||||||||| |||||||||| ||||||| ||||||  ||||||||| | |||| |    
T  39807009 caaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccacctt 39806910  T
Q  490 tagtggatcagaaaccggtgtgaaagt 516  Q
    | |||| ||| ||||||||| ||||||    
T  39806909 tggtggttcataaaccggtgcgaaagt 39806883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 14853528 - 14853365
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||| ||| || |||||| ||||| |||||||||| | |||||||||||| ||||||||| ||||| |||||||     
T  14853528 ccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgt 14853429  T
Q  453 atac--ctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |  |||||| || |||  ||||||||||| || | |||||||||| |||| ||||| |||||    
T  14853428 atgcctctctactcatgagtcggattagtcgtccatctttagtggatc-gaaatcggtgcgaaag 14853365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 367 - 480
Target Start/End: Complemental strand, 41032052 - 41031940
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||||||| | ||| || |||||||||||||  ||| |||||||||  |||| ||||| |||| |||||||||||    
T  41032052 ctccagtggcaaggagctccttccaaggacgtaccaggg-aacaccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcac 41031954  T
Q  467 gagctggattagtc 480  Q
    |||| |||||||||    
T  41031953 gagccggattagtc 41031940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 468
Target Start/End: Complemental strand, 2149356 - 2149240
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgg-gttcgattttcagtgggaacaacgtttggtcagtgcg 451  Q
    ||||||||||||  ||||| || |||||| ||  || |||||| |||||||||||||||||| ||||||||  | | ||||| ||||||||| |||||||    
T  2149356 ccaagttgtttgggctccagtggcaaggaacttctttcaaggatgtatctggggaataccggagttcgattcactgggggaataacgtttggccagtgcg 2149257  T
Q  452 catacctctacgcacga 468  Q
    ||| |||||||||||||    
T  2149256 catgcctctacgcacga 2149240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 2550813 - 2550941
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| || |||||||||||| |||||||| |||||||||||  |||  ||||||||  || | ||||||||    
T  2550813 ccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgc 2550912  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    ||  ||||||||| |||| ||||||||||    
T  2550913 atgtctctacgcatgagccggattagtcg 2550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 353 - 481
Target Start/End: Complemental strand, 21180475 - 21180347
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | |  ||||||||| |||||||  ||  | |||||||  |||| |||||| |    
T  21180475 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcac 21180376  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||||||| ||||||||||    
T  21180375 atgcctctacgcacgagccggattagtcg 21180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 367 - 482
Target Start/End: Complemental strand, 16813311 - 16813197
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| ||||||||||||| |||||||||||||   || |||||||  |||| | |||||| ||||||||||||||  |||| ||||| |||||| ||||    
T  16813311 ctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcag-gggaacaacgtttgaccagtacgcatgcctctatgcac 16813213  T
Q  467 gagctggattagtcgt 482  Q
    |||| |||||||||||    
T  16813212 gagccggattagtcgt 16813197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 367 - 482
Target Start/End: Complemental strand, 16852590 - 16852476
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| ||||||||||||| |||||||||||||   || |||||||  |||| | |||||| ||||||||||||||  |||| ||||| |||||| ||||    
T  16852590 ctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcag-gggaacaacgtttgaccagtacgcatgcctctatgcac 16852492  T
Q  467 gagctggattagtcgt 482  Q
    |||| |||||||||||    
T  16852491 gagccggattagtcgt 16852476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 44193424 - 44193589
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||| |||||| |||||| |||||||| | |||||||| ||||||||||| || |||||||||| |||  | ||| |     
T  44193424 ccaagttgcttggactccagtggcaatgagctctttccaatgacgtatccgaggaataccaggttcgatttttagggggaacaacgcttgacccgtgtga 44193523  T
Q  453 at---acctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||    |||||||  |||||||||||||||||  ||||||| |||| ||||||||||||| |||||    
T  44193524 atgtctcctctacatacgagctggattagtcgcccaccattggtgggtcagaaaccggtgcgaaag 44193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 2528502 - 2528340
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||| |||||||  ||||| || ||| |||||| |||||||||||||   | |||| |||||||||||||  ||| |||||||||| |||||||||| ||    
T  2528502 ccaaattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgtgc 2528403  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||| ||  ||| |||||||||| ||| | ||||||  || ||||| |||| |||||    
T  2528402 atgcctctacacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaag 2528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 2784905 - 2785006
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| || |||||||||||| | ||||||||| ||||||||||||| || |||||  |||||||||||||||| |||||||||| |||   |||||||    
T  2784905 gagctcctttcaaggacgtatccgaggaataccgagttcgattttcag-ggaaacaagatttggtcagtgcgcatgcctctacgcatgagtcagattagt 2785003  T
Q  480 cgt 482  Q
    |||    
T  2785004 cgt 2785006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 403 - 515
Target Start/End: Original strand, 27725935 - 27726047
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    |||||||| || ||| |||| ||||  ||||||| | |||| |||||||||| ||||||||||| ||| ||||||||||  ||||| | |||| || |||    
T  27725935 ggggaatatcgagtttgattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaa 27726034  T
Q  503 accggtgtgaaag 515  Q
    |||||||||||||    
T  27726035 accggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 15079462 - 15079545
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagc 470  Q
    ||||||||||||| | ||||||||| ||||||||||| ||| |||||||||| |||  ||||| ||||  ||||||||||||||    
T  15079462 ttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgcacgagc 15079545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 40969045 - 40968964
Alignment:
Q  384 tcattccaaggacgtatctg-gggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgca 465  Q
    ||||||||||||||| |||  |||||||||||||||||||| ||| |  |||||||||||||||||||| || ||||||||||    
T  40969045 tcattccaaggacgt-tctcagggaataccgggttcgatttccagggaaaacaacgtttggtcagtgcgaatgcctctacgca 40968964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 486
Target Start/End: Complemental strand, 18649187 - 18649054
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||| ||||  ||||||||| | ||   ||||||||||| ||||||| ||||  |||||||  ||||| ||||||||    
T  18649187 ccaagttgtttgggctccagtggcaagaagctgcttccaaggatgcattcagggaataccggattcgattctcaggaggaacaatatttgggcagtgcgc 18649088  T
Q  453 atacctctacgcacgagctggattagtcgttcac 486  Q
    || |||||||||| |||  |||||||||| ||||    
T  18649087 atgcctctacgcatgagtcggattagtcgctcac 18649054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 482
Target Start/End: Original strand, 24179575 - 24179642
Alignment:
Q  414 ggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgt 482  Q
    ||||||||| |||| ||||||||||||||| |||||| ||| |||||||||| |||| |||||||||||    
T  24179575 ggttcgattctcag-gggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgt 24179642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 515
Target Start/End: Complemental strand, 28525554 - 28525454
Alignment:
Q  416 ttcgattttcagtgggaa-caacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||||||| ||| ||||| ||||  |||| |||||||||| ||||||||||||||| ||||||||| | |||| ||| ||| || ||||| |||||||||    
T  28525554 ttcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaactggtgtgaaa 28525455  T
Q  515 g 515  Q
    |    
T  28525454 g 28525454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 515
Target Start/End: Original strand, 33005711 - 33005858
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || ||||||||||||| | |||||||| | | ||||||||||||||  ||  ||| |||||||||  |||| |||||||||| ||||||||||     
T  33005711 ctccagtggcaaggagctcatttctaggacgtacccgtggaataccgggttctgttcccag-gggaacaacacttggccagtgcgcatgcctctacgcat 33005809  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||   ||||| ||| ||||| ||||||| || ||||||| || |||||    
T  33005810 gaggcagattaatcgctcacctttagtgggtcggaaaccgatgcgaaag 33005858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 407 - 481
Target Start/End: Original strand, 29653626 - 29653700
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    |||||||| |||||||| ||| |  ||||||| |||| |||||||||| ||||||||||||||| | ||||||||    
T  29653626 aataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg 29653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 432 - 514
Target Start/End: Original strand, 29802834 - 29802916
Alignment:
Q  432 aacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||||||||||| |||||| ||| ||||||| ||||| || ||||||||| |||| |||  ||| ||||||||||||| ||||    
T  29802834 aacaacgtttggccagtgcacatgcctctacacacgaactagattagtcgctcactatttatgggtcagaaaccggtgcgaaa 29802916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 43303399 - 43303329
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    |||| |||||||||||||||  |||||||||| |||  |||| ||||| |||||| |||||||||||||||    
T  43303399 aatatcgggttcgattttcaaggggaacaacgcttgaccagtacgcatgcctctatgcacgagctggatta 43303329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 41187677 - 41187738
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaac 437  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||||| | || |||||||||    
T  41187677 caaggagctccttctaaggacgtatctgaagaataccgggttcgattatgagggggaacaac 41187738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 481
Target Start/End: Complemental strand, 30722015 - 30721888
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    ||||||| |||  |||||||||||||||| | ||| ||||||||||  ||| ||||| ||| || ||||  | | |||||||||  ||||||||||||||    
T  30722015 caagttgcttggactccaatgacaaggagtttatttcaaggacgtacatggtgaatatcggatttgattcactgggggaacaacacttggtcagtgcgca 30721916  T
Q  454 tacctctacgcacgagctggattagtcg 481  Q
    |  ||||||| | |||  ||||||||||    
T  30721915 tgtctctacgtatgagtcggattagtcg 30721888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 407 - 485
Target Start/End: Complemental strand, 16636172 - 16636094
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttca 485  Q
    |||| ||||||||||||| || || ||||||  ||| |||||| |||| | |||||||||||| |||||||||| ||||    
T  16636172 aatatcgggttcgatttttagaggaaacaacacttgatcagtgtgcatgcttctacgcacgagatggattagtcattca 16636094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 34130461 - 34130301
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||| ||||||| |||||| || ||||||| |  ||||||| ||||||  ||| |||| | |||||||||||||| | ||||||||||||  || ||| |    
T  34130461 ccaaattgtttggcctccagtggcaaggagtttcttccaag-acgtattagggaaatatcaggttcgattttcag-gagaacaacgtttgaccattgcac 34130364  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  ||||||||| ||||  ||||||||||  |||||| || |||| |||| ||||| |||||    
T  34130363 atgtctctacgcatgagccagattagtcgtctaccattggtagatcggaaatcggtgcgaaag 34130301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 23500842 - 23500774
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    ||||||||||||  ||||  || |||||||||| |||||| |||||||| |||||||| |||||||||||    
T  23500842 ccaagttgtttgggctccggtggcaaggagctccttccaaagacgtatc-ggggaatatcgggttcgatt 23500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 407 - 504
Target Start/End: Original strand, 25604594 - 25604690
Alignment:
Q  407 aataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaac 504  Q
    |||||||| |||||||| ||| ||||||||||||||  ||||  |||| |||||||||| ||| ||||||| ||||| |   ||||||||||| ||||    
T  25604594 aataccggattcgatttccag-gggaacaacgtttgaccagtatgcatgcctctacgcatgagttggattaatcgtttatatttagtggatcaaaaac 25604690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 430 - 514
Target Start/End: Complemental strand, 34881090 - 34881005
Alignment:
Q  430 ggaacaacgtttggtcagtgcgcatacctct-acgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||| |||||||||||||||||||| | | | ||| ||| |||||||||| ||| || |||  ||||||| |||||||||||||||    
T  34881090 ggaagaacgtttggtcagtgcgcatgctttttacgtacgggctggattagccgtccatcataggtggatcggaaaccggtgtgaaa 34881005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 8e-33; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 367 - 515
Target Start/End: Complemental strand, 25417330 - 25417182
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| |||||||||||||   ||||||||||||||||||||  ||| |||||||||| |||| |||||||||| |||||||| ||    
T  25417330 ctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaac 25417231  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||| ||||||||| || |||||| |||| ||||||||||||| |||||    
T  25417230 gagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaag 25417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 1538377 - 1538539
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| |||| |||||||||  ||||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  1538377 ccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 1538476  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||| |||| ||||||| |||| || |||||||||| |||||    
T  1538477 atgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 5732081 - 5731919
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||  |||  ||||||||| |||| ||||||||    
T  5732081 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgc 5731982  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||| | ||||  ||||||||||||||| ||||||| || |||||||||| |||||    
T  5731981 atgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 495
Target Start/End: Original strand, 19572670 - 19572812
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||| ||||  ||| |||||||||  |||| ||||||||    
T  19572670 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgc 19572769  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtgg 495  Q
    || |||||||||| |||| ||||||||||||||||||| ||||    
T  19572770 atgcctctacgcatgagccggattagtcgttcaccattggtgg 19572812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 38897879 - 38897718
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||| ||| | || |||||||||| || ||||||||||| |||||||||||||||||||||| ||| |||||||||| |||| ||||||||    
T  38897879 ccaagttgcttgaactcaagtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccag-gggaacaacgcttggccagtgcgc 38897781  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||||| |||||||| |  |||| || ||||||| |||||| ||| |||||    
T  38897780 atgcctctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgcgaaag 38897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 41163620 - 41163459
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||| ||||| | ||||||||||||||||||||  ||| ||||||||||||||| |||||| |    
T  41163620 ccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccag-gggaacaacgtttggccagtgcac 41163522  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  ||||||||| |||||||||||||||| |||| || |||| || ||||| |||| |||||    
T  41163521 atgtctctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaag 41163459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 353 - 514
Target Start/End: Original strand, 37263187 - 37263347
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||||||| || ||| ||||||||| | |||||||| ||||||||||| |||| |||||||||| |||| || |||||    
T  37263187 ccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccaatgcgc 37263285  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    || ||||||||||||||| ||||||||||| |||| ||| |||||| |||||||||| ||||    
T  37263286 atgcctctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 376 - 508
Target Start/End: Complemental strand, 7308502 - 7308370
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||  ||| |||||||||| |||| |||||| ||| |||||||||| |||| ||||    
T  7308502 caaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggat 7308403  T
Q  476 tagtcgttcaccattagtggatcagaaaccggt 508  Q
    |||||| ||||| ||  ||||||| ||||||||    
T  7308402 tagtcgctcacctttgatggatcaaaaaccggt 7308370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 42086296 - 42086435
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | | ||||||||||||||||||  ||| |||||||||| |||  |||||||||| |||||||||| |||| ||||    
T  42086296 caaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggat 42086395  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| |||| || |||| || |||||||||| |||||    
T  42086396 tagtcgtccacctttggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 4016416 - 4016254
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||| ||  ||||| || |||| ||||||||||||||||||| ||| | |||| ||||||||||| |||| |||||||||  |||| ||||||||    
T  4016416 ccaagttgtatgggctccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgc 4016317  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||| ||||||| |||||||| | |||||||| |||| || |||||| ||| |||||    
T  4016316 atgcctctacacacgagccggattagttgctcaccattggtgggtcggaaaccagtgcgaaag 4016254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 353 - 514
Target Start/End: Original strand, 20525784 - 20525945
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| || |||||| ||||| |||||||| |||||||||||  |||  ||||||||  || | ||||||||    
T  20525784 ccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgc 20525883  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    || |||||||||| |||| ||||||||||| ||||||| ||||||| |||||||||| ||||    
T  20525884 atgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 13664229 - 13664368
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||| |||| |||||||||  |||| |||||||||| |||||||||| ||||  |||    
T  13664229 caaggagctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagat 13664328  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||| ||||| || |||  || |||||||||| |||||    
T  13664329 taatcgatcacctttggtgtgtcggaaaccggtgcgaaag 13664368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 20682779 - 20682616
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctc-attccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcg 451  Q
    |||||||| |||  ||||| ||||||||||||| |||| ||||||||| | ||||||||  ||||| ||||| ||| |||||||||| |||| |||||||    
T  20682779 ccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtgcg 20682680  T
Q  452 catacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||| ||||||||||||||| |||||| |||  |||| ||||||| |  |||||||||| |||||    
T  20682679 catgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaag 20682616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 390 - 497
Target Start/End: Original strand, 21149717 - 21149824
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    ||||||||||| || |||||||| |||||||||||||| ||||||||||||||  ||||||||||  ||||||||||||| |||||||||||  ||||||    
T  21149717 caaggacgtatttgaggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgcacgagttggattagtcgcccaccat 21149816  T
Q  490 tagtggat 497  Q
    | ||||||    
T  21149817 tggtggat 21149824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 9812818 - 9812980
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||   ||  ||||||||| |||| ||||| ||    
T  9812818 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgc 9812917  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || | |||||||| || | ||||||||||  |||| || |||| ||||||||||||| |||||    
T  9812918 atgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 30349525 - 30349659
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||||||| || ||||||||||||||| ||||||||||||||| |||||  || |||||||| | |||| ||||||||    
T  30349525 ccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgc 30349624  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || |||||| ||| |||||| ||||||||| ||||    
T  30349625 atgcctctatgcatgagctgaattagtcgtccacc 30349659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 470
Target Start/End: Original strand, 26077087 - 26077204
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||  |||||||||||||||||||||||| ||||||||||  |||||||||  ||| |||||||||| |||| |||||| |    
T  26077087 ccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgcac 26077186  T
Q  453 atacctctacgcacgagc 470  Q
    || |||||||||||||||    
T  26077187 atgcctctacgcacgagc 26077204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 391 - 515
Target Start/End: Original strand, 12081892 - 12082016
Alignment:
Q  391 aaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccatt 490  Q
    ||||||||||| ||||||||| |||||||||| |||| |||||||||| |||| |||||||||| | ||||||||||||| | ||||||||| |||| ||    
T  12081892 aaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccaccttt 12081991  T
Q  491 agtggatcagaaaccggtgtgaaag 515  Q
     |||  || |||| |||||||||||    
T  12081992 ggtgagtcggaaatcggtgtgaaag 12082016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 8513488 - 8513627
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||   || || ||||| | |||| |||||| ||| |||||||||||||||  |||    
T  8513488 caaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagat 8513587  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| |||| || |||| || |||||||||| |||||    
T  8513588 tagtcgtccacctttggtgggtcggaaaccggtgcgaaag 8513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 14588755 - 14588644
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||  || ||||||||||||||||||||| ||||||||||||||||  |||| |||| |||  |||||||||| |||||||||| |||| ||||    
T  14588755 caaggagcttctttcaaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggat 14588656  T
Q  476 tagtcgttcacc 487  Q
    ||||||| ||||    
T  14588655 tagtcgtccacc 14588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 14728028 - 14728191
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtggga-acaacgtttggtcagtgcg 451  Q
    ||||||||||||  ||||| || ||| ||||||||||||||| | | | |||| |||||||| |||||||||||| |||  |||||| ||||||||||||    
T  14728028 ccaagttgtttgggctccagtggcaatgagctcattccaaggtcatttttgggaaataccggattcgattttcagggggggacaacgcttggtcagtgcg 14728127  T
Q  452 catacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||| |||||||||| |||| |||||||| | ||||| ||  ||| || |||||||||| |||||    
T  14728128 catgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaaag 14728191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 18136441 - 18136281
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||| || |||||||||||||||||  ||| |||||||||  |||||||||| ||    
T  18136441 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgc 18136342  T
Q  453 atacctctacgcacgagctgg----attagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||| || |||| ||    ||||||||| ||||||| |||| || ||||||||||    
T  18136341 atgcctctacacatgagccggattaattagtcgtccaccattggtgggtcggaaaccggtg 18136281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 23247489 - 23247378
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||  |||  ||||||||| ||| |||||  |||| |||||||||||||||  |||    
T  23247489 caaggagctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagat 23247390  T
Q  476 tagtcgttcacc 487  Q
    ||||||| ||||    
T  23247389 tagtcgtccacc 23247378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 12704960 - 12705122
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||   ||  ||||||||| |||  ||||| ||    
T  12704960 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgc 12705059  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || | |||||||| || | ||||||||||  |||| || |||| ||||||||||||| |||||    
T  12705060 atgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 12766077 - 12766239
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||| | |||||||||||||||||||| | ||  ||||||| | |||| ||||| ||    
T  12766077 ccaagttgtttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgc 12766176  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| || |  |||||||||  |||| || |||| ||||||||||||| |||||    
T  12766177 atgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12766239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 376 - 502
Target Start/End: Original strand, 30995090 - 30995216
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||||||||||  ||||||||||| |||||||||  ||| |||||||||  |||| ||| |||||| ||||||||||||||| ||||    
T  30995090 caaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggat 30995189  T
Q  476 tagtcgttcaccattagtggatcagaa 502  Q
    |||||| ||| | || |||||| ||||    
T  30995190 tagtcgctcatctttggtggataagaa 30995216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 42861379 - 42861217
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||| |||||||  ||||| || ||||||||||||||||||||| |||| |||||||| ||||||| |||| |   || ||||||  |||| ||||||||    
T  42861379 ccaaattgtttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgcgc 42861280  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||| |||| ||||||| |||| || || ||||||| |||||    
T  42861279 atgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaag 42861217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 3654073 - 3653919
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| |||||| |||||| ||||||||||||| | || |||||||||||||||  |||   | |||||||| |||  ||||||||    
T  3654073 ccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcga--ttcctagagaacaacgcttgaccagtgcgc 3653976  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||||||||||  ||||||||||| |||| || |||||||  |||||||||    
T  3653975 atgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtg 3653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 23383644 - 23383765
Alignment:
Q  394 gacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagt 493  Q
    |||||||| | ||||||||||||||||||  ||| |||||||||| |||| |||||||| | |||||||||| |||||||||||||||| |||| || ||    
T  23383644 gacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggt 23383743  T
Q  494 ggatcagaaaccggtgtgaaag 515  Q
    || || ||||| |||| |||||    
T  23383744 gggtcggaaactggtgcgaaag 23383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 35638174 - 35638065
Alignment:
Q  373 tgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctg 472  Q
    ||||||||| ||| ||||| |||||||| |||||||||  |  ||||||||||||  |||||||||||||||||||| |||||||||||||||||||       
T  35638174 tgacaaggaactccttccagggacgtatttggggaatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtca 35638075  T
Q  473 gattagtcgt 482  Q
    ||||||||||    
T  35638074 gattagtcgt 35638065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 14974462 - 14974351
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||||||| ||||||||||| || ||||| ||||||||||| | |  ||||||||| ||||| |||||| ||| |||||||||| |||| ||||    
T  14974462 caaggagctcattctaaggacgtatccggagaatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccggat 14974363  T
Q  476 tagtcgttcacc 487  Q
    ||||||| ||||    
T  14974362 tagtcgtccacc 14974351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 362 - 509
Target Start/End: Original strand, 28862780 - 28862927
Alignment:
Q  362 ttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctcta 461  Q
    |||| ||||| || |||||||||| |||||| |||||||  |||||||| | ||||||||| ||||  ||||||||| |||| || ||| ||| ||||||    
T  28862780 ttgagctccagtggcaaggagctccttccaaagacgtattcggggaatatcaggttcgattctcaggcggaacaacgcttggccaatgcacatgcctcta 28862879  T
Q  462 cgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||||| ||| |||||| | ||||||||||| | || ||||||||||    
T  28862880 cgcacgacctgaattagttgctcaccattagtaggtcggaaaccggtg 28862927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 7866527 - 7866689
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | | ||||||||||||||||||   ||  ||||||||| |||| ||||| ||    
T  7866527 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgc 7866626  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||||||||||||| | ||||||||||  |||| || |||| | ||||||| ||| |||||    
T  7866627 atgcctctacgcacgaaccggattagtcgcccacctttggtgggttagaaaccagtgcgaaag 7866689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 495
Target Start/End: Complemental strand, 9168412 - 9168272
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||| ||||| || |||||| ||| |||||| |||||||| ||||||||||| |  |||||  |||  ||||||||| |||| ||||||||    
T  9168412 ccaagttgcttgagctccagtggcaagga-ctccttccaaagacgtatccggggaataccgagaacgattcccag-aggaacaacgcttggccagtgcgc 9168315  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtgg 495  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||    
T  9168314 atacctctacgcatgagccggattagtcgtccacctttagtgg 9168272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 403 - 481
Target Start/End: Complemental strand, 18262729 - 18262651
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    |||||||||||||||| |||||||| |||||||||| |||  |||||||||||||||||| ||||||| ||||||||||    
T  18262729 ggggaataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcg 18262651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 406 - 515
Target Start/End: Original strand, 9805003 - 9805112
Alignment:
Q  406 gaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaacc 505  Q
    |||||||||||||||||  ||| |||||||||| |||| |||||||||| |||||||||| |||| ||||||||||| |||| || |||| || |||||     
T  9805003 gaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaca 9805102  T
Q  506 ggtgtgaaag 515  Q
    |||| |||||    
T  9805103 ggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 390 - 495
Target Start/End: Complemental strand, 24653935 - 24653831
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    |||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||||||||  ||| |||||| |||| ||||||    
T  24653935 caaggacgtatccggggaatatagggttcgattttcagggagaacaacacttggtcagtgcgcatacctctacgca-tagccggattaatcgtccaccat 24653837  T
Q  490 tagtgg 495  Q
    | ||||    
T  24653836 tggtgg 24653831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 353 - 470
Target Start/End: Original strand, 28857074 - 28857191
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||| | | ||||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  28857074 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 28857173  T
Q  453 atacctctacgcacgagc 470  Q
    || |||||||||| ||||    
T  28857174 atgcctctacgcatgagc 28857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 41800964 - 41801085
Alignment:
Q  394 gacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagt 493  Q
    ||||||||||||||||| ||||||||||| |||  |||||||||| |||  || |||||||  |||||||||||||| |||||||||||||| | ||  |    
T  41800964 gacgtatctggggaatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgat 41801063  T
Q  494 ggatcagaaaccggtgtgaaag 515  Q
    || || |||| |||||||||||    
T  41801064 gggtcggaaagcggtgtgaaag 41801085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 39728333 - 39728467
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||| ||||| | |||||||||| ||||||||| |||| || ||||||  |||| ||||| ||    
T  39728333 ccaagttgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaataccaggttcgattatcagaggaaacaacacttggccagtgtgc 39728432  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    || ||||||||| ||||  | |||||||| |||||    
T  39728433 atgcctctacgctcgagtcgaattagtcgctcacc 39728467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 380 - 481
Target Start/End: Original strand, 5079304 - 5079405
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||| ||||||| | ||||||||||| | ||||| ||| ||||||| || ||||||| ||||||| | ||||||||||||| ||||||||    
T  5079304 gagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagt 5079403  T
Q  480 cg 481  Q
    ||    
T  5079404 cg 5079405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 406 - 514
Target Start/End: Complemental strand, 42291613 - 42291505
Alignment:
Q  406 gaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaacc 505  Q
    |||||||||||| ||||  ||| | |||||||| |||| |||||| ||| ||||||||||||||| ||||||||||| |||| ||  |||||| ||||||    
T  42291613 gaataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaacc 42291514  T
Q  506 ggtgtgaaa 514  Q
    |||| ||||    
T  42291513 ggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 2485143 - 2485305
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||   |||||||| ||||||||||   || |||||||||  | || | ||||||    
T  2485143 ccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgattcctag-gggaacaaccctgggcctgtgcgc 2485241  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    || |||||||| | |||  |||||||||| ||||| ||  ||| || ||||||| || ||||||    
T  2485242 atgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaagt 2485305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 463
Target Start/End: Complemental strand, 11845939 - 11845852
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacg 463  Q
    |||||||||| ||||||||||||| | | | |||| ||||||||||||  || ||||||||||||||| |||||||||| ||||||||    
T  11845939 caaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacg 11845852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 367 - 490
Target Start/End: Original strand, 14152010 - 14152133
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| |||||| || ||| |||||||||||||||||||||| |||  |||||||||| |||| ||||| |||| | ||||  ||     
T  14152010 ctccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatccat 14152109  T
Q  467 gagctggattagtcgttcaccatt 490  Q
    |||| |||||| |||| |||||||    
T  14152110 gagccggattaatcgtccaccatt 14152133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 468
Target Start/End: Complemental strand, 35403673 - 35403558
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||| |||||||  ||||| || |||||||||| |||||||||||||   ||| |||||||||||||||| | || |||||||||| |||| || |||||    
T  35403673 ccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgc 35403574  T
Q  453 atacctctacgcacga 468  Q
    ||  ||||||||||||    
T  35403573 atgtctctacgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 1898970 - 1899048
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    |||||||||| ||||||||| ||| | ||||||||||||||||||||  ||| |||||||||| |||| ||||||||||    
T  1898970 caaggagctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcat 1899048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 380 - 514
Target Start/End: Original strand, 15034048 - 15034182
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||| ||||||||| ||| | |||||||||||||||| |||| ||  || ||||||  |||||||||| |||| |||||||||| ||||  |||||||    
T  15034048 gagctccttccaaggatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagt 15034147  T
Q  480 cgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
     || |||| ||  |||||| ||||||| |||||||    
T  15034148 tgtccacctttgatggatcggaaaccgatgtgaaa 15034182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 462
Target Start/End: Complemental strand, 18294644 - 18294536
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || || ||||||||| ||| |||||||||| ||   || ||||||||||||| || | ||| |||||||||| |||||||||||||    
T  18294644 ccaagttgtttggacttcagtgacaaggaactccttccaaggacatactcggagaataccgggttcaatatccag-gggaacaacgcttggtcagtgcgc 18294546  T
Q  453 atacctctac 462  Q
    ||||||||||    
T  18294545 atacctctac 18294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 466
Target Start/End: Complemental strand, 38297125 - 38297012
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||| |||||||  ||||| || |||||||||| ||| ||||| |||  || |||||||||||||| |||  ||  ||||||||||||||||||||||||    
T  38297125 ccaaattgtttgggctccagtggcaaggagctccttctaaggatgtacttgaggaataccgggttcaattcccaaggggaacaacgtttggtcagtgcgc 38297026  T
Q  453 atacctctacgcac 466  Q
    || | |||||||||    
T  38297025 attcttctacgcac 38297012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 16755030 - 16755108
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    |||||||||| |||||| |||||||| ||||||||| |||||||||||||||  | ||||||  |||| ||||||||||    
T  16755030 caaggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgcgcat 16755108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 421 - 515
Target Start/End: Original strand, 43399142 - 43399236
Alignment:
Q  421 ttttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| ||||| |||| |||| |||||||||| ||||||||||||||| ||||||||||| |||  || || | || |||||||||| |||||    
T  43399142 ttttcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaag 43399236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 6767212 - 6767143
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||    
T  6767212 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 6767143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 376 - 477
Target Start/End: Original strand, 24498952 - 24499052
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||| ||||   |  || |||| ||| ||||||||||| |||||||| |||||| ||||    
T  24498952 caaggagctccttccaaggacgtatctggagaatatcgggttcga-tttctaagaaaataacgcttgatcagtgcgcatgcctctacgtacgagccggat 24499050  T
Q  476 ta 477  Q
    ||    
T  24499051 ta 24499052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 416 - 477
Target Start/End: Original strand, 25467419 - 25467480
Alignment:
Q  416 ttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatta 477  Q
    ||||||||||||  ||||||||| |||| |||| ||||| ||||||||||||||||||||||    
T  25467419 ttcgattttcaggaggaacaacgattggccagtacgcatgcctctacgcacgagctggatta 25467480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 429 - 506
Target Start/End: Complemental strand, 43212590 - 43212513
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccg 506  Q
    ||||||||||||||| || | ||||| ||||| | || ||| |||||||||||||||||||| |||| ||||||||||    
T  43212590 gggaacaacgtttggccaatacgcatgcctctgcacatgagttggattagtcgttcaccatttgtgggtcagaaaccg 43212513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 515
Target Start/End: Original strand, 7336604 - 7336727
Alignment:
Q  391 aaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccatt 490  Q
    ||||||||||| | |||||| ||||||||||||  |  | |||||||| ||  ||||||||||| ||||||||||||||| |||||| ||||  ||| ||    
T  7336604 aaggacgtatccgaggaatatcgggttcgatttctaaggagaacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctaccttt 7336703  T
Q  491 agtggatcagaaaccggtgtgaaag 515  Q
     |||||| | ||||||||| |||||    
T  7336704 ggtggat-aaaaaccggtgcgaaag 7336727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 20705561 - 20705621
Alignment:
Q  405 ggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgca 465  Q
    |||||| ||| ||| |||||||| | |||||||||||||||||||||||| ||||||||||    
T  20705561 ggaatatcggattcaattttcagggagaacaacgtttggtcagtgcgcatgcctctacgca 20705621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 403 - 479
Target Start/End: Original strand, 38369696 - 38369771
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagt 479  Q
    |||||||| ||||||||||| |||| |||||||||  |||| |||||||||| ||||||||||||||  ||||||||    
T  38369696 ggggaatatcgggttcgattctcag-gggaacaacacttggccagtgcgcatgcctctacgcacgagtcggattagt 38369771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 414 - 481
Target Start/End: Complemental strand, 24463986 - 24463919
Alignment:
Q  414 ggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    |||||||||||||  | |||||||| |||| |||||||||| |||||| |||||||| ||||||||||    
T  24463986 ggttcgattttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcg 24463919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 487
Target Start/End: Original strand, 24875314 - 24875425
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||||| |||||||||||||| |    ||||| | ||||||||| | || | ||||||||||||  ||||||||||  |||||||||||||| ||||    
T  24875314 caaggagcttattccaaggacgtacccaaagaatatcaggttcgattcttagggagaacaacgtttgaccagtgcgcatgtctctacgcacgagccggat 24875413  T
Q  476 tagtcgttcacc 487  Q
    || |||| ||||    
T  24875414 taatcgtccacc 24875425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 20223025 - 20223071
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||    
T  20223025 caaggagctccttccaaagacgtatctggggaatatcgggttcgatt 20223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 25452914 - 25452999
Alignment:
Q  395 acgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    ||||||||| | ||||||| |||  |||||||| |||||||| |||||  ||||| |||| ||||||||||||||| ||||||||||    
T  25452914 acgtatctgagaaataccgagtttaattttcag-gggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcg 25452999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 406 - 480
Target Start/End: Complemental strand, 35006843 - 35006769
Alignment:
Q  406 gaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtc 480  Q
    ||||||||||||| |||   || |||||||||| |||||||||| |||| |||||||||||||||  ||||||||    
T  35006843 gaataccgggttccattccgagagggaacaacgcttggtcagtgtgcatgcctctacgcacgagccagattagtc 35006769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 422
Target Start/End: Original strand, 28856923 - 28856992
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||| | | ||||||||||||||||||||    
T  28856923 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgatt 28856992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 40060295 - 40060343
Alignment:
Q  406 gaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    |||||||||||||||||||||| |||||||||  |||| ||||||||||    
T  40060295 gaataccgggttcgattttcagggggaacaacacttggccagtgcgcat 40060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 514
Target Start/End: Original strand, 21487615 - 21487721
Alignment:
Q  405 ggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaac 504  Q
    |||||| || |||||||||||||  ||||||||||||||  ||||||||| |||||   ||||||| ||||||||||  |||| ||| ||| ||  ||||    
T  21487615 ggaatatcgagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccacctttaatgggtcgaaaac 21487711  T
Q  505 cggtgtgaaa 514  Q
    ||||| ||||    
T  21487712 cggtgcgaaa 21487721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 479
Target Start/End: Complemental strand, 35245144 - 35245041
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||| |||||| |||| | ||||||  | |||| |||||||| ||||||||||||||  ||||| |||| | |||||||| ||||  |||    
T  35245144 caaggagctccttctaaggacatatccgaggaatattgagttcaattttcagagggaacaacgtttgaccagtgtgcatgcttctacgcatgagcctgat 35245045  T
Q  476 tagt 479  Q
    ||||    
T  35245044 tagt 35245041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 515
Target Start/End: Original strand, 16757384 - 16757486
Alignment:
Q  413 gggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtga 512  Q
    ||||||||||| | |  ||| ||||||||||| ||||||||| ||||||||||  || || |||| |||| || | ||||||| |||||||||| || ||    
T  16757384 gggttcgatttccggaaggaccaacgtttggttagtgcgcatgcctctacgcataagttgaattaatcgtccatctttagtgggtcagaaaccgatgcga 16757483  T
Q  513 aag 515  Q
    |||    
T  16757484 aag 16757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 504
Target Start/End: Original strand, 32874798 - 32874884
Alignment:
Q  418 cgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaac 504  Q
    |||||||||  |||||||||| |||   ||||||||||||| ||||||||||| | |||| |||| ||||||| |||| || |||||    
T  32874798 cgattttcaaggggaacaacgcttgactagtgcgcatacctttacgcacgagccgaattaatcgtccaccattggtgggtcggaaac 32874884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 35813136 - 35813090
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgatt 422  Q
    |||| ||||||||||||||||||| | | ||||||||||||||||||    
T  35813136 caagaagctcattccaaggacgtacccgaggaataccgggttcgatt 35813090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 432 - 481
Target Start/End: Complemental strand, 6764539 - 6764490
Alignment:
Q  432 aacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    ||||| ||||||  ||||||||| ||||||||||||||| ||||||||||    
T  6764539 aacaatgtttggctagtgcgcatgcctctacgcacgagccggattagtcg 6764490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 1e-31; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 3418674 - 3418512
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||  || |||||||||| |||||||||||||||||||||||| ||||||||||||| ||  ||||||||  |||| ||||||||    
T  3418674 ccaagttgtttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgc 3418575  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || | |||||||| |||   |||||||||| |||| ||||||| ||||||||||||| |||||    
T  3418574 atgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaag 3418512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 8141051 - 8141213
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||  ||||||||||||||  ||||||||||||||||||||| ||| || ||||||| |||| ||||||||    
T  8141051 ccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgc 8141150  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||||| ||||||||| |||  || |||| |||||||||| || |||||    
T  8141151 atgcctctacgcatgagctgaattagtcgtccacatttggtgggtcagaaaccgatgcgaaag 8141213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 2467279 - 2467117
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||  |||| ||||||||    
T  2467279 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgc 2467180  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||  ||||| ||| |||| ||||||||||| ||| ||| |||  || |||||||||| |||||    
T  2467179 atgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 495
Target Start/End: Original strand, 6100421 - 6100563
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  || || || |||||||||| || |||||||||||| ||||||||||||||||||||  |||  ||||||||| |||| ||||||||    
T  6100421 ccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgc 6100520  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtgg 495  Q
    || || ||||||| |||| |||||||||||||||| |||||||    
T  6100521 atgccactacgcatgagccggattagtcgttcacctttagtgg 6100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 353 - 470
Target Start/End: Original strand, 13085473 - 13085590
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||| |||||||  ||||| || | |||||||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| | ||||| ||    
T  13085473 ccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgc 13085572  T
Q  453 atacctctacgcacgagc 470  Q
    ||||||||||||||||||    
T  13085573 atacctctacgcacgagc 13085590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 353 - 498
Target Start/End: Complemental strand, 1013138 - 1012993
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||  ||||||||||||||| ||||||||||||||||||||  ||| |||||||||| |||| |||| | |    
T  1013138 ccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacac 1013039  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatc 498  Q
    || |||||||||| |||| | |||| ||||||||| ||||||||||    
T  1013038 atgcctctacgcatgagccgaattaatcgttcacctttagtggatc 1012993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 377 - 514
Target Start/End: Complemental strand, 15884692 - 15884556
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||  ||| |||||||||  ||||  ||||||||| ||||||||||||||| |||||    
T  15884692 aaggagctccttccaaggacgtacctggggaataccgggttcgattcccag-gggaacaacacttggcaagtgcgcatgcctctacgcacgagccggatt 15884594  T
Q  477 agtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||||  |||| || |||| || |||||||||| ||||    
T  15884593 agtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 353 - 481
Target Start/End: Complemental strand, 14666232 - 14666104
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||  ||| || ||||||  |||| ||||||||    
T  14666232 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgc 14666133  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||| |||  |||||||||    
T  14666132 atgcctctacgcacaagccagattagtcg 14666104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 44893439 - 44893283
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||| | |||||||||||||||| ||||  || |||||||| | |||| ||||| ||    
T  44893439 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgc 44893340  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||||||||||||||| |||||| ||| ||||| ||  ||| || ||||||||||    
T  44893339 atgcctctacgcacgagccggattaatcgctcacccttgatgggtcggaaaccggtg 44893283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 10927578 - 10927717
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||  || |||||||||| | ||||||||||||||||||||   ||  ||||||||| |||| |||||||||| |||||||||| |||| ||||    
T  10927578 caaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggat 10927677  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||||| ||||||| || ||||||| || |||||    
T  10927678 tagtcgttcacctttagtgggtcggaaaccgatgcgaaag 10927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 45521118 - 45521279
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || ||||||| |||||||||||| ||| | ||||||||||||||||||||  ||| |||||||||  ||| |||||||||    
T  45521118 ccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccag-gggaacaacacttgatcagtgcgc 45521216  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||| |||||||||| ||||| ||  ||| || |||||||||| |||||    
T  45521217 atgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 45521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 355 - 516
Target Start/End: Complemental strand, 33401958 - 33401798
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  ||||| || |||||||||| || ||||||||||   ||||||||||||||||||||||||| |||||||||  |||  ||||| ||||    
T  33401958 aagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcat 33401859  T
Q  455 acctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
     |||||||||| |||  ||||||||||  |||| ||||||||||| |||||| || ||||||    
T  33401858 gcctctacgcatgagtcggattagtcgcccacctttagtggatca-aaaccgatgcgaaagt 33401798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 470
Target Start/End: Complemental strand, 38922575 - 38922458
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||||||||| | ||||||||||||||||||||  ||| |||||||||| |||| ||||||||    
T  38922575 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgc 38922476  T
Q  453 atacctctacgcacgagc 470  Q
    || ||| |||||||||||    
T  38922475 atgcctttacgcacgagc 38922458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 355 - 482
Target Start/End: Original strand, 18373961 - 18374088
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcat 454  Q
    ||||||||||  |||||||| ||||||||||||||||| ||  |||| ||| |||||| ||||||||| |||| | |||||||| |||  ||||||||||    
T  18373961 aagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcat 18374060  T
Q  455 acctctacgcacgagctggattagtcgt 482  Q
     |||||||||| |||| |||||||||||    
T  18374061 gcctctacgcatgagccggattagtcgt 18374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 356 - 515
Target Start/End: Original strand, 43032853 - 43033012
Alignment:
Q  356 agttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcata 455  Q
    |||||||||  ||||| || ||||||| || ||||||  | ||||||||| |||| ||| |||||||  ||| |||||||||| |||| ||||||||||     
T  43032853 agttgtttgggctccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatg 43032952  T
Q  456 cctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||| ||||||| ||||||||||  |||| || |||| ||||||||||||| |||||    
T  43032953 cctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 43033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 506
Target Start/End: Complemental strand, 9860157 - 9860003
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctgggg-aataccgggttcgattttcagtgggaacaacgtttggtcagtgcg 451  Q
    ||||||||||||   |||| || ||| |||||| ||||||||||||||| |||| ||||||||||||||||  ||| |||||||||  |||| ||||| |    
T  9860157 ccaagttgtttgggatccagtggcaaagagctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtg 9860058  T
Q  452 catacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccg 506  Q
    ||| ||||||| || ||||  |||||||||| ||||||| ||||||| |||||||    
T  9860057 catgcctctacacatgagccagattagtcgtccaccattggtggatcggaaaccg 9860003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 14846525 - 14846686
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||| ||||| ||| ||||||||| | |||||||||||||||||||| |||| |||||||| | |||||||||||||    
T  14846525 ccaagttgtttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattctcag-gggaacaatgattggtcagtgcgc 14846623  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||   ||| |||||| |||| || |||| || |||| ||||| |||||    
T  14846624 atgcctctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaag 14846686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 24837191 - 24837353
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||||||| ||||||| ||||| | ||||||||||| ||||||||  ||| | |||||||| |||| |||||  |    
T  24837191 ccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttc 24837290  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||| |||||||| ||||||||||| |||| || ||||||| ||||| |||| |||||    
T  24837291 atgcctctaagcacgagcaggattagtcgtccacctttggtggatcggaaactggtgcgaaag 24837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 390 - 514
Target Start/End: Complemental strand, 4479419 - 4479296
Alignment:
Q  390 caaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccat 489  Q
    |||||||||| |||  ||||||||| |||||||  ||| |||||||||| |||| |||||||||| |||||||||| |||||||||||||||| |||| |    
T  4479419 caaggacgtacctgtagaataccggattcgattcccag-gggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctt 4479321  T
Q  490 tagtggatcagaaaccggtgtgaaa 514  Q
    | |||| || |||||||||| ||||    
T  4479320 tggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 7673801 - 7673657
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| |||||||||||||||||||||||| |  ||||||||   || |||||||||||||||  |||| |||| |||||||||||    
T  7673801 ctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgatt---agggggaacaacgtttggctagtgtgcatgcctctacgcac 7673705  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||| |||||  |||  || | ||||||||||  ||||||||| ||||    
T  7673704 gagccggatttttcgcccatctttagtggatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 20240546 - 20240635
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgag 469  Q
    ||||||||||||||||||||||| ||||||| || ||||||||| |||    || |||||||||||||||||||| ||||||||||||||    
T  20240546 gagctcattccaaggacgtatctagggaatatcgagttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgcacgag 20240635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 20252521 - 20252432
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgag 469  Q
    ||||||||||||||||||||||| ||||||| || ||||||||| |||    || |||||||||||||||||||| ||||||||||||||    
T  20252521 gagctcattccaaggacgtatctagggaatatcgagttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgcacgag 20252432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 376 - 477
Target Start/End: Complemental strand, 35496392 - 35496292
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||||||||| |||||||||||| | |||||| | ||||| |||||||| || ||||||  ||||||||||||||| |||||||| |||||||||||    
T  35496392 caaggagctcatttcaaggacgtatc-gaggaatatcaggttcaattttcagaggaaacaacacttggtcagtgcgcatgcctctacgtacgagctggat 35496294  T
Q  476 ta 477  Q
    ||    
T  35496293 ta 35496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 353 - 482
Target Start/End: Original strand, 43027254 - 43027383
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||| ||||||||| |||| |||||| |||||||||| ||||||||||  |||  ||||||||| |||  || |||||    
T  43027254 ccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgcgc 43027353  T
Q  453 atacctctacgcacgagctggattagtcgt 482  Q
    || |||||||||| |||| |||||||||||    
T  43027354 atgcctctacgcatgagccggattagtcgt 43027383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 354 - 509
Target Start/End: Complemental strand, 68258 - 68103
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    |||||||||||| ||||  || |||||||||| ||||||||||||    |||||| | ||||||||||| ||||  |||||||||||||| ||||  |||    
T  68258 caagttgtttgagctccggtggcaaggagctccttccaaggacgtgctcggggaagatcgggttcgattctcaggaggaacaacgtttggccagtatgca 68159  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    | ||| ||| ||||||| |||||| ||||||||| ||  ||| || ||||||||||    
T  68158 tgcctttacacacgagccggattaatcgttcacctttgatgggtcggaaaccggtg 68103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 2209755 - 2209894
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||| |||||||| |||| |||||| |||||| |||| | || || |||||| ||||||||||||||||  | |||||||  || |||||    
T  2209755 caaggagctccttctaaggacgtgtctgaggaatatcgggtttgattcttaggggaaacaacatttggtcagtgcgcatgtccctacgcataagttggat 2209854  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||| |||||||| || | |||||||| |||| |||||    
T  2209855 tagtcgctcaccattggtaggtcagaaactggtgcgaaag 2209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 10535564 - 10535431
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||||||||||||| | |||||||  ||||| |||||||| ||||||| || |||  ||||||||    
T  10535564 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtatccgaggaatacatggttcaattttcag-gggaacaccgcttgaccagtgcgc 10535466  T
Q  453 atacctctacgcacgagctggattagtcgttcacc 487  Q
    ||  ||| ||||| |||| | ||||||||||||||    
T  10535465 atgtctccacgcatgagccgaattagtcgttcacc 10535431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 376 - 509
Target Start/End: Original strand, 11785888 - 11786020
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||||||||||||||||| | |||||||||||| ||||| || ||  |||| |||||||||| ||||| |||| |||||||||| ||||  |||    
T  11785888 caaggagctcattccaaggacgtacccggggaataccggattcga-ttccaaggggagcaacgtttgggcagtgtgcatgcctctacgcatgagccagat 11785986  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtg 509  Q
    || ||| ||| | ||  |||||| ||||||||||    
T  11785987 taatcgctcatctttgatggatcggaaaccggtg 11786020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 13358995 - 13359087
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgag 469  Q
    ||||||||| |||||| || || || ||  |||||||||||||||| ||||  ||||||||| |||| |||||||||||||||||||||||||    
T  13358995 aaggagctccttccaaagatgtgtccggaaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctctacgcacgag 13359087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 24938723 - 24938561
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || ||||||||||  ||||||||| || | || ||||||| ||||||||||  ||  | ||||||  ||||||| |||||    
T  24938723 ccaagttgtttgggctccagtggcaaggagctccctccaaggacatacccggagaataccaggttcgatttctagatgaaacaacacttggtcaatgcgc 24938624  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| || | ||||||||| | |||| ||  |||||| ||||||||| ||||||    
T  24938623 atgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaaccggtatgaaag 24938561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 414 - 515
Target Start/End: Complemental strand, 16291303 - 16291202
Alignment:
Q  414 ggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaa 513  Q
    |||||||||||||| |||||||||  |||| |||| | ||| |||||| ||| ||||||||||||||| ||||| || |||| ||  |||||||||||||    
T  16291303 ggttcgattttcagggggaacaacacttggccagtacacatgcctctatgcatgagctggattagtcgctcacctttggtgggtcgaaaaccggtgtgaa 16291204  T
Q  514 ag 515  Q
    ||    
T  16291203 ag 16291202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 466
Target Start/End: Original strand, 34846763 - 34846875
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||||||||||||||||| |  |||||||||||||||||||  ||  | |||||||| |||| ||||  ||    
T  34846763 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgta-cccgggaataccgggttcgattcccatggtgaacaacgcttggccagtatgc 34846861  T
Q  453 atacctctacgcac 466  Q
    || |||||||||||    
T  34846862 atgcctctacgcac 34846875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 2964048 - 2964187
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||| ||||| ||||||| ||||| | ||||||||||| ||||||||   |   ||||||||| |||| || || |||| ||||||||||||| | ||||    
T  2964048 caagtagctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctctacgcacgaaccggat 2964147  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  |||| || |||| ||||||||||||| |||||    
T  2964148 tagtcgcccacctttggtgggtcagaaaccggtgcgaaag 2964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 353 - 456
Target Start/End: Original strand, 6940507 - 6940610
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| ||  ||||||||||||||||||| ||||| ||  |||| |||||||||||| |||  ||||||||| ||||  |||||||    
T  6940507 ccaagttgtttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgc 6940606  T
Q  453 atac 456  Q
    ||||    
T  6940607 atac 6940610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 388 - 487
Target Start/End: Original strand, 22958754 - 22958853
Alignment:
Q  388 tccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    |||||||||||| ||| |||||| ||  |||||||||||| |||||||| | |||||||||| ||||  ||||| ||| |||| ||||||||||| ||||    
T  22958754 tccaaggacgtacctgtggaatatcgaattcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacc 22958853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 43349454 - 43349343
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    ||||||||||||| ||| ||||||| |||| |||| ||| ||| ||||  || |||||||||| || | |||||  ||||||||||| ||||||| ||||    
T  43349454 caaggagctcatttcaaagacgtatttgggaaatatcggattcaatttctagggggaacaacgctttgccagtgttcatacctctactcacgagccggat 43349355  T
Q  476 tagtcgttcacc 487  Q
    |||||| |||||    
T  43349354 tagtcgctcacc 43349343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 515
Target Start/End: Complemental strand, 8997705 - 8997543
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||  ||||| || |||||| ||| || ||||||| |||  ||||||||||| ||||||||   |  ||||||||||||| | |||| |||    
T  8997705 ccaagttgcttggactccagtggcaaggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttcgc 8997606  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || ||| |||||| ||||  ||||||||||||| | || |||| || |||||||||| |||||    
T  8997605 atgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaag 8997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 367 - 469
Target Start/End: Original strand, 17981404 - 17981506
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||| ||| | ||| ||||||||||||||||  ||| |||||||||  |||  ||||| |||| |||||||||||    
T  17981404 ctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcac 17981503  T
Q  467 gag 469  Q
    |||    
T  17981504 gag 17981506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 13358046 - 13357961
Alignment:
Q  424 tcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||| ||||||||||||||| || || |||| |||||| |||||||| ||||||||||| | || ||||||| || ||||||||||    
T  13358046 tcagggggaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccggtg 13357961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 353 - 454
Target Start/End: Original strand, 22810029 - 22810129
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||||| || ||| | |||||||||||  | | |||||||||| |||||||||||||    
T  22810029 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgattccctg-gggaacaacgcttggtcagtgcgc 22810127  T
Q  453 at 454  Q
    ||    
T  22810128 at 22810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 3692864 - 3692916
Alignment:
Q  435 aacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    ||||||||||||||||||||||||||||||| |||| | |||| |||||||||    
T  3692864 aacgtttggtcagtgcgcatacctctacgcatgagccgaattaatcgttcacc 3692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 487
Target Start/End: Original strand, 23895595 - 23895651
Alignment:
Q  431 gaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||||| |||| ||||    
T  23895595 gaacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacc 23895651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 515
Target Start/End: Original strand, 36662388 - 36662515
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||||||||||  | |||||| |||||||||||||||| ||||||||   || | |||||||||| |||||||| | || | ||||||||||| |||    
T  36662388 ttccaaggacgtatacgaggaatatcgggttcgattttcag-gggaacaatacttagccagtgcgcatgcctctacgtatgaaccggattagtcgtccac 36662486  T
Q  487 cattagtggatcagaaaccggtgtgaaag 515  Q
      ||| |||||| ||||||| || |||||    
T  36662487 ttttaatggatcggaaaccgatgcgaaag 36662515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 583763 - 583923
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||  |||||||||||||   | | ||||||||||||||||   ||  ||||||||| |||  ||||||||    
T  583763 ccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgc 583860  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||  ||||||||||  |||| ||  ||||| ||||||||||| |||||    
T  583861 atgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaag 583923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 355 - 481
Target Start/End: Complemental strand, 44031599 - 44031468
Alignment:
Q  355 aagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtc-----agtg 449  Q
    ||||||||||| ||| | || |||||| ||| ||||||||| ||| | ||| |||| |||||||||||| ||| |||||||||| |||| |     ||||    
T  44031599 aagttgtttgagctctagtggcaaggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtg 44031500  T
Q  450 cgcatacctctacgcacgagctggattagtcg 481  Q
     |||| ||||| ||||||||| ||||||||||    
T  44031499 tgcatgcctctgcgcacgagccggattagtcg 44031468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 403 - 481
Target Start/End: Original strand, 6042820 - 6042898
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcg 481  Q
    ||||||||||||||||||||  ||  |||||||||| |||| |||||||||| |||  ||||| |||| ||||||||||    
T  6042820 ggggaataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcg 6042898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 376 - 476
Target Start/End: Original strand, 16893909 - 16894009
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||| ||| |||||| |||||||| |||||||| |||||||||||  ||| ||||| |||| |||| |||| | ||| ||| |||||| |||| ||||    
T  16893909 caaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgcctttacgcatgagccggat 16894008  T
Q  476 t 476  Q
    |    
T  16894009 t 16894009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 515
Target Start/End: Complemental strand, 36914531 - 36914432
Alignment:
Q  416 ttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||||||||  ||||||||| ||| ||||||| |||| | ||| ||| ||| |||||||||| | ||||||| |||| ||  |||||||| ||||||    
T  36914531 ttcgattttcaggaggaacaacgcttgatcagtgcacatatcactatgcatgagttggattagtcatccaccattggtgggtcgaaaaccggtatgaaag 36914432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 429 - 475
Target Start/End: Complemental strand, 8587024 - 8586978
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||| ||||||||||||||||||||| |||| ||||    
T  8587024 gggaacaacgcttggccagtgcgcatacctctacgcatgagccggat 8586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 9395979 - 9395909
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattt 423  Q
    |||||||| |||  ||||| || ||| ||||||||| |||||| |||||||||||||| ||| ||||||||    
T  9395979 ccaagttgcttggactccagtggcaatgagctcatttcaaggatgtatctggggaatatcggattcgattt 9395909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 2e-30; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 367 - 515
Target Start/End: Original strand, 319384 - 319532
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||||||||| |||||  || |||||||||| |||| |||||||||| |||||| |||     
T  319384 ctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcat 319483  T
Q  467 gagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||||||||| |||| || ||||  | |||||||||| |||||    
T  319484 gagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 541 - 680
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||  ||| |||||||||  ||| |||||| |||| |||||||| | ||||  |||    
T  541 caaggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagat 640  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||| ||||| || |||| || |||||||||| |||||    
T  641 tagtcgctcacctttggtgggtcggaaaccggtgcgaaag 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 412160 - 412091
Alignment:
Q  380 gagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtg 449  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||  ||| |||||||||| ||||||||||    
T  412160 gagctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgcttggtcagtg 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 354 - 514
Target Start/End: Original strand, 186467 - 186626
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgca 453  Q
    ||||||| |||| ||| | || |||||||| | ||| ||||| |||| ||| ||||| |||||||||||| ||| | ||| || ||||||||||||| ||    
T  186467 caagttggttgagctctagtggcaaggagcaccttctaaggatgtatttggagaatatcgggttcgattt-cagggagaataatgtttggtcagtgcaca 186565  T
Q  454 tacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    | ||||||||||||||| |||||||||||||| | ||||||| || |||||||||||||||    
T  186566 tgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 224265 - 224428
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    |||||||| |||| ||| | || ||||||||   ||| ||||||||||  || ||||| ||||||||| | |||| | ||| |||||||| ||||||| |    
T  224265 ccaagttgcttgagctctagtggcaaggagcatcttctaaggacgtattcggagaatatcgggttcgaatctcagggagaataacgtttgatcagtgcac 224364  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    |||||||||||||||||| ||||||||||| || | || |||| || |||||||||| ||||||    
T  224365 atacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaagt 224428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 8821 - 8700
Alignment:
Q  394 gacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagt 493  Q
    |||||||| | ||||||||||||||||||  ||| |||||||||| |||| |||||||| | |||||||||| |||||||||||||||| |||| || ||    
T  8821 gacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggt 8722  T
Q  494 ggatcagaaaccggtgtgaaag 515  Q
    || || ||||| |||| |||||    
T  8721 gggtcggaaactggtgcgaaag 8700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 2e-21; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 376 - 481
Target Start/End: Complemental strand, 271212 - 271107
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| ||||||||||||| | || ||||| |||||||||||  ||| |||||||||| |||||||||||||||  |||||||||||||| || |    
T  271212 caaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggt 271113  T
Q  476 tagtcg 481  Q
    ||||||    
T  271112 tagtcg 271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 381 - 481
Target Start/End: Complemental strand, 249438 - 249338
Alignment:
Q  381 agctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtc 480  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||| |||| | ||| |||| |||  |||||| ||||||||||||||||||  |||||||||    
T  249438 agctccttctaaggacgtatttggggaataccaggttcgattctcagggagaataacgcttgaccagtgcacatacctctacgcacgagtcggattagtc 249339  T
Q  481 g 481  Q
    |    
T  249338 g 249338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 219402 - 219473
Alignment:
Q  438 gtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||| |||| ||  ||||||  |||||||||    
T  219402 gtttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtg 219473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 250114 - 250024
Alignment:
Q  425 cagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||| ||| | |||||| |||||||||| ||||||||||||||| |||||||||| || || || |||| || |||| ||||| |||||    
T  250114 cagtggaaaccatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 250024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 403 - 515
Target Start/End: Original strand, 6853 - 6965
Alignment:
Q  403 ggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaa 502  Q
    ||||||||||||||||||||  ||| |||||||||  |||| |||||||||| |||||||||| |||| |||||||||| ||||| || |||| || |||    
T  6853 ggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaa 6952  T
Q  503 accggtgtgaaag 515  Q
    ||||||| |||||    
T  6953 accggtgcgaaag 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 40992 - 41120
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||||| || |||||||||| ||||| |||||||    ||||||| ||||||||||| |||  |||||||||  |||||||||| ||    
T  40992 ccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgtgc 41091  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||||||| ||||||||||    
T  41092 atgcctctacgcacgagccggattagtcg 41120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 391 - 482
Target Start/End: Original strand, 26169 - 26260
Alignment:
Q  391 aaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgt 482  Q
    |||||| || ||||||||||| ||||||||||| ||| |||||||||| |||| ||||| |||| ||||||||||||||| |||||||||||    
T  26169 aaggacatacctggggaatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgt 26260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 353 - 481
Target Start/End: Original strand, 68465 - 68590
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||| ||||||||||||| | ||| |||| |||||||||||  ||| |||||||||| ||||   ||||||    
T  68465 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgc 68561  T
Q  453 atacctctacgcacgagctggattagtcg 481  Q
    || ||||||||||||||| ||||||||||    
T  68562 atgcctctacgcacgagccggattagtcg 68590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 376 - 516
Target Start/End: Original strand, 12641 - 12781
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||| ||||| ||||||||||||  | ||||||||||||||||||||   ||  ||||||||| |||| ||||| |||| ||||||||||||| | ||||    
T  12641 caagaagctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggat 12740  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaagt 516  Q
    ||||||  |||| ||  ||| ||||||||||||| ||||||    
T  12741 tagtcgcccacctttgatgggtcagaaaccggtgcgaaagt 12781  T

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Target: scaffold0316 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 376 - 515
Target Start/End: Complemental strand, 1752 - 1613
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| |||||| |||||  |||||||||||| |||||||||| ||| |||||||||| || | |||||||||| |||||||||| ||||   ||    
T  1752 caaggagctccttccaatgacgtgcctggggaataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaat 1653  T
Q  476 tagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    ||||||  |||| || |||| ||  ||||||||| |||||    
T  1652 tagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 1613  T

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Target: scaffold0004 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 388 - 508
Target Start/End: Complemental strand, 7961 - 7841
Alignment:
Q  388 tccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcacc 487  Q
    |||||||||||| | ||||||||||||||| ||||  ||  ||||| |||  |||| |||||||||| ||||||||||  ||||||||||||||  ||||    
T  7961 tccaaggacgtacccggggaataccgggtttgattcccaaggggaaaaacacttggccagtgcgcatgcctctacgcattagctggattagtcgcccacc 7862  T
Q  488 attagtggatcagaaaccggt 508  Q
     || ||||||| |||||||||    
T  7861 tttggtggatcggaaaccggt 7841  T

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Target: scaffold0004; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 367 - 490
Target Start/End: Complemental strand, 95126 - 95005
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    |||||||| |||||||||| ||||||| | ||||| |||||||||| ||||||||||  ||  | |||||||||||  |||||||||| ||| ||||||     
T  95126 ctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttctag--gaaacaacgtttgaccagtgcgcatgcctttacgcat 95029  T
Q  467 gagctggattagtcgttcaccatt 490  Q
    |||| ||||||||||  |||||||    
T  95028 gagccggattagtcgcccaccatt 95005  T

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Target: scaffold0384 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 376 - 506
Target Start/End: Original strand, 5944 - 6073
Alignment:
Q  376 caaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggat 475  Q
    |||||||||| || ||||| |||| | ||||||||| ||||||||||| ||| ||| |||||| |||| |||||| ||| |||||||||| |||  | ||    
T  5944 caaggagctcctttcaagggcgtacccggggaatactgggttcgatttccag-ggggacaacgcttggccagtgcacatgcctctacgcatgagacgaat 6042  T
Q  476 tagtcgttcaccattagtggatcagaaaccg 506  Q
    ||||||| ||||||| |||| || |||||||    
T  6043 tagtcgtccaccattggtgggtcggaaaccg 6073  T

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Target: scaffold0050 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 72599 - 72708
Alignment:
Q  371 aatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagc 470  Q
    |||| |||||||||| ||||||||||||||| ||| ||||||||||||||||| ||  |||||||||| |||  |||||||||| |||| | |||  |||    
T  72599 aatgtcaaggagctccttccaaggacgtatcaggg-aataccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctcaaagcataagc 72697  T
Q  471 tggattagtcg 481  Q
     ||||||||||    
T  72698 cggattagtcg 72708  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 516
Target Start/End: Complemental strand, 42959 - 42830
Alignment:
Q  387 ttccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcac 486  Q
    ||||||| | ||| |||||||||| |||||||||||   || | |||||| | ||||||||||||||| ||||||| || |||| ||||||||||  |||    
T  42959 ttccaagaatgtacctggggaatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccac 42860  T
Q  487 cattagtggatcagaaaccggtgtgaaagt 516  Q
    | || |||| || |||||||||| ||||||    
T  42859 ctttggtgggtcggaaaccggtgcgaaagt 42830  T

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Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 9406 - 9479
Alignment:
Q  375 acaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagt 448  Q
    ||||||||||| || ||||||||||  |||||||||||||||||||||  ||| |||||||||| |||| ||||    
T  9406 acaaggagctcctttcaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggccagt 9479  T

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Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 429 - 514
Target Start/End: Original strand, 19279 - 19364
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaa 514  Q
    |||||||||| ||||  |||||||| ||||||||||| |||| ||||||||||  ||  ||||||||||| |||||||||| ||||    
T  19279 gggaacaacgcttggctagtgcgcagacctctacgcatgagccggattagtcggccattattagtggatcggaaaccggtgcgaaa 19364  T

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Target: scaffold0079 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 8151 - 8231
Alignment:
Q  381 agctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctac 462  Q
    ||||| ||||||||||||| | ||||||||||||||||||||  ||  |||||||||| |||| |||||||||| |||||||    
T  8151 agctccttccaaggacgtacccggggaataccgggttcgattccca-agggaacaacgcttggccagtgcgcatgcctctac 8231  T

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Target: scaffold0209 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 353 - 515
Target Start/End: Original strand, 12523 - 12683
Alignment:
Q  353 ccaagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgc 452  Q
    ||||||||||||  ||| | || |||||||||  |||||||||||||   | | ||||||||||||||||   ||  ||||||||| |||  ||||||||    
T  12523 ccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgc 12620  T
Q  453 atacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    || |||||||||| |||  ||||||||||  |||| ||  ||||| ||||||||||| |||||    
T  12621 atgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaag 12683  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 416 - 515
Target Start/End: Complemental strand, 155809 - 155710
Alignment:
Q  416 ttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||  ||| |||||||||| ||||  ||||||||| ||||||||||||||| ||||||||||  |||| || |||| || ||| |||||| |||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

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Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 377 - 487
Target Start/End: Original strand, 16851 - 16961
Alignment:
Q  377 aaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggatt 476  Q
    ||||||||| ||||||||| | ||   |||||||  |||||| ||| |||| || ||||||| |||||||||||| ||  ||||||||||||||  ||||    
T  16851 aaggagctccttccaaggatgcattcagggaatattgggttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagatt 16950  T
Q  477 agtcgttcacc 487  Q
    ||||| |||||    
T  16951 agtcgctcacc 16961  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 429 - 515
Target Start/End: Complemental strand, 65237 - 65151
Alignment:
Q  429 gggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtgtgaaag 515  Q
    |||||||||| |||| ||||||||||  ||||||||| ||||||||||||||| ||||  ||  | |||| |||||||||| |||||    
T  65237 gggaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcgctcacttttgatagatcggaaaccggtgcgaaag 65151  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 509
Target Start/End: Original strand, 149396 - 149489
Alignment:
Q  416 ttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcacgagctggattagtcgttcaccattagtggatcagaaaccggtg 509  Q
    ||||||| |||| |||||||||| |||  ||||| |||| |||||||| ||||| | |||||||||  ||||| | |||| |||||||||||||    
T  149396 ttcgattctcagggggaacaacgcttgaccagtgtgcatgcctctacgtacgaggtagattagtcgcccaccaatggtgggtcagaaaccggtg 149489  T

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Target: scaffold0341 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 367 - 479
Target Start/End: Original strand, 18594 - 18706
Alignment:
Q  367 ctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattttcagtgggaacaacgtttggtcagtgcgcatacctctacgcac 466  Q
    ||||| || |||||||||| ||||||||| ||| | |  ||| |||||||||||||   || |||||||||| |||| |||||| |||  ||||||||||    
T  18594 ctccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgcac 18693  T
Q  467 gagctggattagt 479  Q
    ||||  |||||||    
T  18694 gagccagattagt 18706  T

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Target: scaffold0332 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 15280 - 15349
Alignment:
Q  354 caagttgtttgacctccaatgacaaggagctcattccaaggacgtatctggggaataccgggttcgattt 423  Q
    |||||||||||  ||| | || |||||||||| || |||||| ||| | |||||||||||||||||||||    
T  15280 caagttgtttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggttcgattt 15349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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