View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4478_high_13 (Length: 236)
Name: NF4478_high_13
Description: NF4478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4478_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 2031541 - 2031746
Alignment:
| Q |
14 |
tgaaatgaaattaaaaaataaataattaacttttgcttagttttaccaacatcataactgaacggattcagaactattacatcaagtaaaatgctaaata |
113 |
Q |
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| T |
2031541 |
tgaaatgaaattaaaaaataaataattaacttttgcttagttttaccaacatcataactgaacggattcagaactattacatcaagtaaaatgataaata |
2031640 |
T |
|
| Q |
114 |
cattcaagtatgcataatgattcaaattccattacatttcaaaatgaccattccaaaatggcataattcaagtttggatactaatcgagacaacaacaca |
213 |
Q |
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| T |
2031641 |
cattcaagtatgcataatgattcaaattccattacatttcaaaatgaccattccaaaatggcataattcaagtttggatactaatcgagacaacaacaca |
2031740 |
T |
|
| Q |
214 |
ttacct |
219 |
Q |
| |
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|||||| |
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| T |
2031741 |
ttacct |
2031746 |
T |
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