View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4478_low_10 (Length: 268)
Name: NF4478_low_10
Description: NF4478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4478_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 19 - 257
Target Start/End: Original strand, 26450245 - 26450483
Alignment:
| Q |
19 |
gatgacaagggaaccatctgatgttctagaagagatgaatgaccgtctttcggctaaagaacttcagcttgtgttggtttatttctctcaagatggaaga |
118 |
Q |
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| T |
26450245 |
gatgacaagagaaccatctgatgttctagaagagatgaatgaccgtctttcggctaaagaacttcagcttgtgttggtttatttctctcaagatggaaga |
26450344 |
T |
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| Q |
119 |
gattcatggtgtgctttagaggtttttgattggttaaggaaagagaacagggttgataaggaaactatggagttaatggttgctattatgtgtggttggg |
218 |
Q |
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| T |
26450345 |
gattcatggtgtgctttggaggtttttgattggttaaggaaagagaacagggttgataaggaaactatggagttaatggttgctattatgtgtggttggg |
26450444 |
T |
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| Q |
219 |
tgaagaaattgattatggaaaaacatggtgttggtgatg |
257 |
Q |
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| T |
26450445 |
tgaagaaattgattatggaaaaacatggtgttggtgatg |
26450483 |
T |
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