View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4479_high_3 (Length: 300)
Name: NF4479_high_3
Description: NF4479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4479_high_3 |
 | |
|
| [»] scaffold0057 (1 HSPs) |
| | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
| [»] scaffold0251 (1 HSPs) |
| | |
|
| [»] scaffold0189 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 5377087 - 5376890
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5377087 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatattgaa |
5376988 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
5376987 |
tgagtacaatagtgttcctatatataagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
5376890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 5378942 - 5378745
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5378942 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatattgaa |
5378843 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
5378842 |
tgagtacaatagtgttcctatatataagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
5378745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 1088675 - 1088871
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactctta-gaaactcattgtagaaatgaatagattgataaaagatgatga |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
1088675 |
gtcatagatgtaagcaagatagcaaacataagagtactcatatgggagatactcaaaagaaactcattatagaa-tgaatagattgataaaagatgatga |
1088773 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||| || ||| || ||||| ||||||||||||||| |
|
|
| T |
1088774 |
atgagtacaatagtgttcctatatat-agagattagtttgactaactaactctaactaacttctaacaaagctactaactctaatttacttatcaacta |
1088871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 19645322 - 19645518
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
19645322 |
gtcatagatgtaaccaagatagcaagtataagagtactcatgagggagatactcaaagaaattcattgtagaaataaatagattgataaaagataatgaa |
19645421 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||| ||||||| | ||||||||||||||||||| ||| ||||| |||||||||| ||| || || |||||||||||||||||| |
|
|
| T |
19645422 |
tgagtacaatagtgttcttatatat-agagattagtttgagtaactacctctgactaatttctaaccaagctactaactttagtttacttatcaacta |
19645518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 15868514 - 15868405
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
15868514 |
aaaagataatgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctattaactctagttta |
15868416 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
| ||||||||| |
|
|
| T |
15868415 |
cctatcaacta |
15868405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 198
Target Start/End: Original strand, 15149116 - 15149263
Alignment:
| Q |
57 |
agaaactcattgtagaaatgaatagattgataaaagatgatgaatg-----agtacaatagt--gttcctatatataaaagattagtttgagtaactaat |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || |||| ||||||||||||| |
|
|
| T |
15149116 |
agaaactcattgtagaaatgaatagattgataaaagataatgaatgagtacagtacaacagtacgttcctatatatagaa-attaatttgagtaactaac |
15149214 |
T |
|
| Q |
150 |
tctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||||| ||| | | ||||||||||||||||||| |
|
|
| T |
15149215 |
tctaactaacttctaaccaagctactgaccctagtttacttatcaacta |
15149263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 9415276 - 9415095
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaataga-ttga-taaaagatgatga |
99 |
Q |
| |
|
||||| |||||| ||| | | |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| ||||| |||| |||||||||| | |
|
|
| T |
9415276 |
tcataaatgtaaacaaaagaacaaacataagagtactcatgtgggagatactcatagaaactcattgtag-aatg-atagatttgattaaaagatgacta |
9415179 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagt |
184 |
Q |
| |
|
|||||||||||||||| ||||||| | |||||||||| | ||||||| |||||||||||||||||||| ||| || ||||||| |
|
|
| T |
9415178 |
gagagtacaatagtgttcttatatat-agagattagtttcactaactaactctaactaacttctaaccaagctactaactctagt |
9415095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 15866702 - 15866593
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||||| |||| ||| || |||||||||| |
|
|
| T |
15866702 |
aaaagataatgaatgagtacaatagtgttcctaaatataga-gattagtttgagtaactaactctaactaacttctacccaagctattaactctagttta |
15866604 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
| ||||||||| |
|
|
| T |
15866603 |
cctatcaacta |
15866593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 33866221 - 33866112
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
33866221 |
aaaagatagtgaatgagtacaatagtgttcctatatataga-gattagtctgagtaactaactctaactaacttctaaccaagctactaactctagttta |
33866123 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
| ||||||||| |
|
|
| T |
33866122 |
cctatcaacta |
33866112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 8915676 - 8915570
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaat |
101 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| |||||| ||||| |||||||| |||||||| ||| |||||||||||||||| |||||||||| | ||| |
|
|
| T |
8915676 |
tcatagatgtaagcaagagagcaagcataagagtactcgtgtggaagatactcatagaaacttattatagaaatgaatagattaataaaagatgctaaat |
8915577 |
T |
|
| Q |
102 |
gagtaca |
108 |
Q |
| |
|
||||||| |
|
|
| T |
8915576 |
gagtaca |
8915570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 33869368 - 33869259
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
33869368 |
aaaagatagtgaatgcgtacaatagtgttcctatatataga-gattagtttaagtaactaactctaactaacttctaaccaagctactaactctagttta |
33869270 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
| ||||||||| |
|
|
| T |
33869269 |
cctatcaacta |
33869259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 20985831 - 20985923
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagat |
94 |
Q |
| |
|
|||||||||||| |||| | |||| |||||| |||||||||||| ||||||| || ||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
20985831 |
tcatagatgtaatcaagtttgcaagcataagagtactcatgtggtagatacttataaaaattcattatagaaatgaatagattgataaaagat |
20985923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 24544818 - 24544757
Alignment:
| Q |
11 |
taagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtaga |
72 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
24544818 |
taagcaagaaagcaagcataagagtactcatgagggagatactcatagaaactcatagtaga |
24544757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 162; Significance: 2e-86; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 17402804 - 17403001
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17402804 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatattgaa |
17402903 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
17402904 |
tgagtacaatagtgttcctatatataagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
17403001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 1140210 - 1140045
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1140210 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatgatgaa |
1140111 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaacc |
167 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1140110 |
tgagtacaatagtgttcctatatat-agagattagtttgagtaactaactctaactaacttctaacc |
1140045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 6789829 - 6789633
Alignment:
| Q |
1 |
gtcatagatgtaagcaa-gatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatga |
99 |
Q |
| |
|
||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||| |
|
|
| T |
6789829 |
gtcatagatgtaagcaaagatagcaagcataagagtactcatgtgggagatactcatagaaactcattgtagaa-tgaatagattgaaaaaagatagtga |
6789731 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||| ||||||| |||| |
|
|
| T |
6789730 |
atgagtacaatagtattcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagttcacttatccacta |
6789633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 9032763 - 9032822
Alignment:
| Q |
38 |
tcatgtgggagatactcttagaaactcattgtagaaatgaatagatt-gataaaagatgat |
97 |
Q |
| |
|
||||||||||||||| | ||||||||||| |||| || ||||||||| ||||||||||||| |
|
|
| T |
9032763 |
tcatgtgggagatacccatagaaactcatagtag-aaggaatagattggataaaagatgat |
9032822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 20046517 - 20046715
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaa-gatgatga |
99 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
20046517 |
gtcatagatgtaagcgagatagcaagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaaagatattga |
20046616 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
20046617 |
atgagtacaatagtgttcctatatataagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
20046715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 44963372 - 44963176
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| ||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44963372 |
gtcatagatgtaagtaagatagcaagcataagagtattcatgagggagatactcaaagaaattcattgtagaaatgaatagattgataaaagatgatgaa |
44963273 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| ||| || | ||||||||||||||||||| |
|
|
| T |
44963272 |
tgagtacaatagtgttcctatatat-agagattaatttgagtaactaactctaactaacttctaaccaagctactaaccctagtttacttatcaacta |
44963176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 4895792 - 4895597
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgat-aaaagatgatgaa |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||| | ||| | ||| |||||| |||||| ||||||||||||| |
|
|
| T |
4895792 |
tcatagatgtaagcaagagagcaaacataagagtactcatctgggagatactcatagagatccatattggaa-tgaatatattgattaaaagatgatgaa |
4895694 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
4895693 |
tgagtacaatagtgttcctatatataga-gattagtttgagtaaataactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
4895597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 28124610 - 28124806
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagatt-gat-aaaagatgatga |
99 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||| | ||| | ||| |||| | ||| ||| |||||||||||| |
|
|
| T |
28124610 |
tcatagatgtaagcaagagagcaagcataagagtactcatgtgggagatactcatagagatccatattggaa-tgaaaatatttgattaaaagatgatga |
28124708 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
28124709 |
atgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
28124806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 28126437 - 28126633
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagatt-gat-aaaagatgatga |
99 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||| | ||| | ||| |||| | ||| ||| |||||||||||| |
|
|
| T |
28126437 |
tcatagatgtaagcaagagagcaagcataagagtactcatgtgggagatactcatagagatccatattggaa-tgaaaatatttgattaaaagatgatga |
28126535 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
28126536 |
atgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
28126633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 28014296 - 28014406
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaat |
101 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28014296 |
tcatagatgtaagcaagatagcaagcataagagtgctcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatgaataat |
28014395 |
T |
|
| Q |
102 |
gagtacaatag |
112 |
Q |
| |
|
||||||||||| |
|
|
| T |
28014396 |
gagtacaatag |
28014406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 37405559 - 37405668
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
37405559 |
aaaagatagtgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagttta |
37405657 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
||||||||| |
|
|
| T |
37405658 |
tctatcaacta |
37405668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 25471794 - 25471904
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaat |
101 |
Q |
| |
|
||||||||||||| |||||||||| |||||| || ||| |||||||||||| |||||||||||| || ||||||||||||||||||||||||| ||| |
|
|
| T |
25471794 |
tcatagatgtaagaaagatagcaagcataagattattcacgtgggagatactaatagaaactcattatataaatgaatagattgataaaagatgaataat |
25471893 |
T |
|
| Q |
102 |
gagtacaatag |
112 |
Q |
| |
|
||||||||||| |
|
|
| T |
25471894 |
gagtacaatag |
25471904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 8405715 - 8405628
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataa |
89 |
Q |
| |
|
||||| |||||||||| ||||||| |||||| ||| ||||| |||||||| || |||||||||||||||||||||| ||||||||||| |
|
|
| T |
8405715 |
tcatatatgtaagcaaaatagcaagcataagagtattcatgggggagataatcgtagaaactcattgtagaaatgactagattgataa |
8405628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 4880343 - 4880288
Alignment:
| Q |
71 |
gaaatgaat-agattgataaaagatgatgaatgagtacaatagtgttcctatatat |
125 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
4880343 |
gaaatgaattagattgataaaagatgatgaatgagtataatggtgttcatatatat |
4880288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 138; Significance: 4e-72; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 30224439 - 30224243
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30224439 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaa |
30224340 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||| |
|
|
| T |
30224339 |
tgagtacaatagtgttcctatatat-agagattagtttgagtaactacctctaactaacttctaaccaagctactaactctagtttacttatcaacta |
30224243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 25249215 - 25249025
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25249215 |
gtcatatatgtaagcaagatagcaagcataagggtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatcatgaa |
25249116 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttat |
192 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||| ||| || ||||||||||||||| |
|
|
| T |
25249115 |
tgagtacaatagtgttcctatatat-agagattagtttgagtaactacctttaactaacttctaaccaagctactaactctagtttacttat |
25249025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 5567635 - 5567439
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5567635 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatgatgaa |
5567536 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||||||||||||||||| || |||||||||||||| || ||| || |||||||||| ||||||||| |
|
|
| T |
5567535 |
tgagtacaatagttttcctatatat-agagattagtttgagtaactaactccaactaacttctaactaagctactaactctagtttagctatcaacta |
5567439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 6428950 - 6428753
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaataga-ttga-taaaagatgatg |
98 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | |||||||| |||| |||||||||||| |
|
|
| T |
6428950 |
gtcatagatgtaagtaagatagcaaacataagagtactcatgtgagagatactcaaagaaactcattgtag-agtgaatagatttgattaaaagatgatg |
6428852 |
T |
|
| Q |
99 |
aatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||| || || || ||||||||||||||||||||| |
|
|
| T |
6428851 |
aatgattacaatagtgttcctatatat-agagattagtttgagtaactacctctaactaacttttaactaaggtactaactctagtttacttatcaacta |
6428753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 3379149 - 3379332
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaatgagtacaatag |
112 |
Q |
| |
|
||||||| ||||| |||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3379149 |
agcaagaaagcaagtataaaagtactcatgtgggagatactcatagaaactcattatagaa-tgaatagattgataaaaaatgatgaatgagtacaatag |
3379247 |
T |
|
| Q |
113 |
tgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
| ||||| ||||| | ||||||||||||||||||| ||||||||||||||||| |||||| || |||||||||| ||||||||| |
|
|
| T |
3379248 |
ttttccttaatataga-gattagtttgagtaactaactctaactaacttctaactaaactactaactctagtttaactatcaacta |
3379332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 3375456 - 3375641
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
|||||||||||||| |||||||||| || ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
3375456 |
gtcatagatgtaagtaagatagcaagcaaaagagtactcatgtgggagatactc----------attgtagaaatgaatagattga-aaaagataatgaa |
3375544 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|| ||||||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || | ||||||||||||||||||| |
|
|
| T |
3375545 |
tgggtacaatagagttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaaccctagtttacttatcaacta |
3375641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 31032038 - 31032217
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaatgagtacaatag |
112 |
Q |
| |
|
||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| |||||||||| | || |
|
|
| T |
31032038 |
agcaagaaagcaagcataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgataaaagatcatgaatgagtgtagtaa |
31032136 |
T |
|
| Q |
113 |
tgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||| | ||||||||||||||| ||| || | ||||||||||||||||||| |
|
|
| T |
31032137 |
tgttcctatatat-agagattagtttgagtaactaact----ctaacttctaaccaagctactaaccctagtttacttatcaacta |
31032217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 36535924 - 36536035
Alignment:
| Q |
71 |
gaaatgaatagattgataaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaa |
170 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| || |||||||| | |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
36535924 |
gaaatgaatagattgataaaagatgatgaatgagtacaacagtattgctatatat-agagattagtttgagtaactaactctaactaacttctaaccaag |
36536022 |
T |
|
| Q |
171 |
ctagtagctctag |
183 |
Q |
| |
|
||| || |||||| |
|
|
| T |
36536023 |
ctactaactctag |
36536035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 14939711 - 14939625
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||| ||||| |||| | |||||||||| | |||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
14939711 |
agcaagaaagcaagcatatgagtactcatgtagaagatactcgtagaaactcattatag-aatgaatagattgataaaagatgatgaa |
14939625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 19473728 - 19473649
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaaga |
93 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||| |
|
|
| T |
19473728 |
agcaagaaagcaagaataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgatagaaga |
19473649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 19544653 - 19544574
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaaga |
93 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||| |
|
|
| T |
19544653 |
agcaagaaagcaagaataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgatagaaga |
19544574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 19588043 - 19588122
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaaga |
93 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||| |
|
|
| T |
19588043 |
agcaagaaagcaagaataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgatagaaga |
19588122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36535873 - 36535922
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagat |
50 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
36535873 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgtgggagat |
36535922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 14935646 - 14935590
Alignment:
| Q |
142 |
taactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||||||||||||| || || ||||||||||| ||||||||| |
|
|
| T |
14935646 |
taactaattctaactaacttctaaccaagttactaactctagtttacctatcaacta |
14935590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 7040570 - 7040374
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7040570 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaa |
7040471 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||| |
|
|
| T |
7040470 |
tgagtacaatagtgttcctatatat-agagattagtttgagtaactacctctaactaacttctaaccaagctactaactctagtttacttatcaacta |
7040374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 23564697 - 23564893
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||| ||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23564697 |
gtcatagatgtaagcaaaatagcaagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaa |
23564796 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||| |
|
|
| T |
23564797 |
tgagtacaatagtgttcctatatat-agagattagtttgagtaactacctctaactaacttctaaccaagctactaactctagtttacttatcaacta |
23564893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 18656317 - 18656121
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18656317 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatgatgaa |
18656218 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||| || ||| || |||||||||| ||||||||| |
|
|
| T |
18656217 |
tgagtacaatagttttcctatatat-agagattagtttgagtaactaactctaactaacttctaactaagctactaactctagtttagctatcaacta |
18656121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 52520810 - 52520614
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagatt-gat-aaaagatgatga |
99 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| ||||||||||||||||||||| |||| | ||| | |||||||| | ||| ||| |||||||||||| |
|
|
| T |
52520810 |
tcatagatgtaagaaagagagcaagcataagagtactcatgtgggagatactcatagagatccatatt-gaaatgaaaatatttgattaaaagatgatga |
52520712 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
52520711 |
atgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
52520614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 52518968 - 52518772
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagatt-gat-aaaagatgatga |
99 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| | ||||||||||||||||||| |||| | ||| | ||| |||| | ||| ||| |||||||||||| |
|
|
| T |
52518968 |
tcatagatgtaagcaagagagcaagcataagagaactcatgtgggagatactcatagagatccatattggaa-tgaaaatatttgattaaaagatgatga |
52518870 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
52518869 |
ttgagtacaacagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
52518772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 54296617 - 54296454
Alignment:
| Q |
21 |
agcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgat-aaaagatgatgaatgagtacaatagtgttcct |
119 |
Q |
| |
|
||||| |||||| ||||| ||| ||||||||||| |||||||||||| || |||||||| ||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
54296617 |
agcaagcataagagtactgatgagggagatactcatagaaactcattata-aaatgaattgattgattaaaagatcatgaatgagtacaatagtgttcct |
54296519 |
T |
|
| Q |
120 |
atatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtt |
185 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||| |
|
|
| T |
54296518 |
atatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagtt |
54296454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 23566449 - 23566567
Alignment:
| Q |
79 |
tagattgataaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagc |
178 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||| || |
|
|
| T |
23566449 |
tagattgataaaagataatgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactacctctaactaacttctaaccaagctactaag |
23566547 |
T |
|
| Q |
179 |
tctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
23566548 |
tctagtttacttatcaacta |
23566567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 23985946 - 23985787
Alignment:
| Q |
38 |
tcatgtgggagatactcttagaaactcattgtagaaatgaatagatt-gataaaagatgatgaatgagtacaatagtgttcctatatataaaagattagt |
136 |
Q |
| |
|
|||||||||||||| | |||| |||||| | |||| | |||||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
23985946 |
tcatgtgggagataaccatagagactcataggagaa-tcaatagatttgataaaagatggtgaatgagtacaatagtgttcctatatataga-gattagt |
23985849 |
T |
|
| Q |
137 |
ttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||||| |
|
|
| T |
23985848 |
ttgaataactaactctaactaacttctaaccaagctactaactctagtttacctatcaacta |
23985787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 3529251 - 3529365
Alignment:
| Q |
83 |
ttgataaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctcta |
182 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || || || |
|
|
| T |
3529251 |
ttgataaaagataatgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaacttta |
3529349 |
T |
|
| Q |
183 |
gtttacttatcaacta |
198 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
3529350 |
gtttacctatcaacta |
3529365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 52545137 - 52545319
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgat-gaatgagtacaata |
111 |
Q |
| |
|
||||||| ||| | |||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| || ||||| |||| | |
|
|
| T |
52545137 |
agcaagaaagcgagcataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgataaaagataataaaatga-tacatga |
52545234 |
T |
|
| Q |
112 |
gtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||| | || |||| ||| |||||||| |||||| ||||||||||||| ||| || ||||||||||| ||||||||| |
|
|
| T |
52545235 |
gtgttcctatatat-agagtttag-ttgtgtaactaactctaaccaacttctaaccaagctactaactctagtttacctatcaacta |
52545319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 56074680 - 56074766
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatga |
99 |
Q |
| |
|
||||||| ||||| |||||| ||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||| |
|
|
| T |
56074680 |
agcaagaaagcaagcataagagtactcatgtgggagatactcatagaaactcgttatagaaatgaatagaatgataaaagatgatga |
56074766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23566391 - 23566444
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactc |
54 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||| |||| ||||||||||| |
|
|
| T |
23566391 |
gtcatagatgtaagcaagatagcaagcataagagtacccatgagggagatactc |
23566444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 18395691 - 18395776
Alignment:
| Q |
27 |
cataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagat-tgataaaagatgatgaatgagtacaatag |
112 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || | |||||| ||| | ||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
18395691 |
cataagagtattcatgtgggagatactcatatagactcatagtatag-tgaatagatatgataaaagatagtgaatgagtacaatag |
18395776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 29758329 - 29758133
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
29758329 |
gtcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaa |
29758230 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||| |
|
|
| T |
29758229 |
tgagtacaatagtgttcctatatat-agagattagtttgagtaactacctctaactaacttctaaccaagctactaactctagtttacttatcaacta |
29758133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 8759119 - 8759207
Alignment:
| Q |
34 |
gtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaatgagtacaatagtgttcctata |
122 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8759119 |
gtactcatgagggagatactcaaagaaactcattgtagaaatgaacagattgataaaagatgatgaatgagtacaatagtgttcctata |
8759207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18612074 - 18612174
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaag-atgatgaatgagtacaata |
111 |
Q |
| |
|
||||||| ||||| |||||| |||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| || |||| ||||||||||| |
|
|
| T |
18612074 |
agcaagaaagcaagcataagagtactcatgtgggagatatttacaaaaactcattatagaaatgaatagattgataaaagtataatgattgagtacaata |
18612173 |
T |
|
| Q |
112 |
g |
112 |
Q |
| |
|
| |
|
|
| T |
18612174 |
g |
18612174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 20516061 - 20516103
Alignment:
| Q |
96 |
atgaatgagtacaatagtgttcctatatataaaagattagtttg |
139 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
20516061 |
atgaatgagtacaatagtgttcttatatataaaa-attagtttg |
20516103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 17148670 - 17148710
Alignment:
| Q |
21 |
agcaaacataagggtactcatgtgggagatactcttagaaa |
61 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
17148670 |
agcaaacataacagtactcatgtgggagatactcatagaaa |
17148710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 17449519 - 17449324
Alignment:
| Q |
1 |
gtcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||| ||||| |
|
|
| T |
17449519 |
gtcatagatgtaagcaagatagcaagcaaaagagtactcatgtgggagatactcatagaatctcattgtagacatgaatagattga-aaaagataatgaa |
17449421 |
T |
|
| Q |
101 |
tgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| || ||| || | ||||||||||||||||||| |
|
|
| T |
17449420 |
tgagtacaatagtgttcctatatat-agagattagtttgagtaactaactctaactaacttctaacgaagctactaaccctagtttacttatcaacta |
17449324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 16808601 - 16808797
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagatt-gat-aaaagatgatga |
99 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| |||||||||| |||||||||| |||| | ||| | ||| |||| | ||| ||| |||||||||||| |
|
|
| T |
16808601 |
tcatagatgtaagcaagagagcaagcataagagtactcatgtcggagatactcatagagatccatattggaa-tgaaaatatttgattaaaagatgatga |
16808699 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
16808700 |
atgagtacaatagtgttcatatatataga-gattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaacta |
16808797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 9312151 - 9312042
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
9312151 |
aaaagataatgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagttta |
9312053 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
| ||||||||| |
|
|
| T |
9312052 |
cctatcaacta |
9312042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 3282923 - 3282814
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
3282923 |
aaaagatagtgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagttta |
3282825 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
| ||||||||| |
|
|
| T |
3282824 |
cctatcaacta |
3282814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 3284624 - 3284515
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
3284624 |
aaaagatagtgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagttta |
3284526 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
| ||||||||| |
|
|
| T |
3284525 |
cctatcaacta |
3284515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 9310534 - 9310425
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
9310534 |
aaaagataatgaatgagtacaatagtgttcctatatatagat-attaatttgagtaactaactctaactaacttctaaccaagctactaactctagttta |
9310436 |
T |
|
| Q |
188 |
cttatcaacta |
198 |
Q |
| |
|
||||||||||| |
|
|
| T |
9310435 |
cttatcaacta |
9310425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 48941810 - 48941646
Alignment:
| Q |
4 |
atagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcat--tgtagaaatgaataga-ttga-taaaagatgatga |
99 |
Q |
| |
|
|||||||||||||||| ||||| ||||| ||| ||||||| ||||||||| || |||||||| | |||||||||||||| |||| |||||||| ||| |
|
|
| T |
48941810 |
atagatgtaagcaagagagcaagtataagagtattcatgtgagagatactcatataaactcattatatagaaatgaatagatttgattaaaagatactga |
48941711 |
T |
|
| Q |
100 |
atgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaa |
165 |
Q |
| |
|
||||||||||||||||| ||| ||| | ||||||||||||||||| || |||||||||||||||| |
|
|
| T |
48941710 |
atgagtacaatagtgtttatatgtat-agagattagtttgagtaaccaactctaactaacttctaa |
48941646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 5924828 - 5924932
Alignment:
| Q |
21 |
agcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaatgagtacaatagtgttccta |
120 |
Q |
| |
|
||||| |||||| ||| |||| | |||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| | |||| ||||||| || |
|
|
| T |
5924828 |
agcaagcataagagtattcatataggagatactcatagaaactcattatagaa-tgaatagattgataaaagatgatgaaataatacacgagtgttctta |
5924926 |
T |
|
| Q |
121 |
tatata |
126 |
Q |
| |
|
|||||| |
|
|
| T |
5924927 |
tatata |
5924932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 37664704 - 37664773
Alignment:
| Q |
129 |
agattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||||| |
|
|
| T |
37664704 |
agattagtttgaataactaactctaactaacttctaaccaagctactaactctagtttacctatcaacta |
37664773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 37674426 - 37674495
Alignment:
| Q |
129 |
agattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||||| |
|
|
| T |
37674426 |
agattagtttgaataactaactctaactaacttctaaccaagctactaactctagtttacctatcaacta |
37674495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 37702268 - 37702199
Alignment:
| Q |
129 |
agattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |||||||||| ||| || ||||||||||| ||||||||| |
|
|
| T |
37702268 |
agattagtttgaataactaactctaactaatttctaaccaagctactaactctagtttacctatcaacta |
37702199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 902147 - 902090
Alignment:
| Q |
141 |
gtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||||| |
|
|
| T |
902147 |
gtaactaactctaactaacttctaaccaagctactaactctagtttacctatcaacta |
902090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 5924946 - 5924992
Alignment:
| Q |
152 |
taactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||||||||||| || ||||| ||||| ||||||||| |
|
|
| T |
5924946 |
taactaacttctaaccaaactactaactctaatttacctatcaacta |
5924992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 9487535 - 9487458
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaaga |
93 |
Q |
| |
|
||||||| ||||| |||||| || ||||||| ||||||||| ||| | ||||||||||| ||||||||||||||||||| |
|
|
| T |
9487535 |
agcaagaaagcaagcataagattattcatgtgagagatactc--agagattcattgtagaa-tgaatagattgataaaaga |
9487458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 48940726 - 48940689
Alignment:
| Q |
161 |
tctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
48940726 |
tctaaccaaactactaactctagtttacttatcaacta |
48940689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 58982 - 58809
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaatgagtacaatag |
112 |
Q |
| |
|
||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
58982 |
agcaagaaagcaagcataagagtactcatgtgggagatactcatagaaactcattatagaa-tgaatagattgataaaagatgatgaatgagtacaatag |
58884 |
T |
|
| Q |
113 |
tgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttac |
188 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |
|
|
| T |
58883 |
tgttcctatatat-agagattagtttgagtaactaactctaactaacttctaaccaagctactaactctagtttac |
58809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 39341 - 39158
Alignment:
| Q |
13 |
agcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatg-aatgagtacaata |
111 |
Q |
| |
|
||||||| |||||| |||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||| |||| | |
|
|
| T |
39341 |
agcaagaaagcaaaattaagagtactcatgtgggagatactcataaaaactcattatagaaatgaatagattgataaaagatgatgaaatga-tacatga |
39243 |
T |
|
| Q |
112 |
gtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaacta |
198 |
Q |
| |
|
|||||||||||||| | || |||| ||| |||||||| | |||||||||||||||||| ||| || ||||||||||||||||||||| |
|
|
| T |
39242 |
gtgttcctatatat-agagtttag-ttgtgtaactaactttaactaacttctaaccaagctactaactctagtttacttatcaacta |
39158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0251 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0251
Description:
Target: scaffold0251; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 6348 - 6242
Alignment:
| Q |
88 |
aaaagatgatgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagttta |
187 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
6348 |
aaaagatagtgaatgagtacaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagttta |
6250 |
T |
|
| Q |
188 |
cttatcaa |
195 |
Q |
| |
|
| |||||| |
|
|
| T |
6249 |
cctatcaa |
6242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 39787177 - 39787277
Alignment:
| Q |
97 |
tgaatgagtacaatagtgttcctatatataaaagattagtttgagtaactaattctaactaacttctaaccaaactagtagctctagtttacttatcaac |
196 |
Q |
| |
|
|||||||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||| |
|
|
| T |
39787177 |
tgaatgagtaaaatagtgttcctatatataga-gattagtttgagtaactaactctaactaacttctaaccaagctactaactctagtttacctatcaac |
39787275 |
T |
|
| Q |
197 |
ta |
198 |
Q |
| |
|
|| |
|
|
| T |
39787276 |
ta |
39787277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 25076173 - 25076296
Alignment:
| Q |
37 |
ctcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaatgagtacaatag-tgttcctatatataaaagattag |
135 |
Q |
| |
|
|||||| | |||||| || |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| | ||||||||||| | | ||||||| |
|
|
| T |
25076173 |
ctcatgagagagatattcatagaaactcattatagaaatgaatatattgataaaagatgatgaaagagtacaattgttgttcctatatct-agagattag |
25076271 |
T |
|
| Q |
136 |
tttgagtaactaattctaactaact |
160 |
Q |
| |
|
|| || | ||| | ||||||||||| |
|
|
| T |
25076272 |
ttggaatgacttactctaactaact |
25076296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 25134142 - 25134265
Alignment:
| Q |
37 |
ctcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaagatgatgaatgagtacaatag-tgttcctatatataaaagattag |
135 |
Q |
| |
|
|||||| | |||||| || |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| | ||||||||||| | | ||||||| |
|
|
| T |
25134142 |
ctcatgagagagatattcatagaaactcattatagaaatgaatatattgataaaagatgatgaaagagtacaattgttgttcctatatct-agagattag |
25134240 |
T |
|
| Q |
136 |
tttgagtaactaattctaactaact |
160 |
Q |
| |
|
|| || | ||| | ||||||||||| |
|
|
| T |
25134241 |
ttggaatgacttactctaactaact |
25134265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 20012959 - 20013030
Alignment:
| Q |
15 |
caagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgat |
87 |
Q |
| |
|
||||| ||||| |||||| ||||||||||||||||||||| |||||||||||| ||| ||||||| ||||||| |
|
|
| T |
20012959 |
caagaaagcaagcataagagtactcatgtgggagatactcatagaaactcattatag-aatgaattgattgat |
20013030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0189 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0189
Description:
Target: scaffold0189; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 19153 - 19063
Alignment:
| Q |
2 |
tcatagatgtaagcaagatagcaaacataagggtactcatgtgggagatactcttagaaactcattgtagaaatgaatagattgataaaaga |
93 |
Q |
| |
|
||||||||||||||||||||| || |||| | ||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
19153 |
tcatagatgtaagcaagatagaaagcataggagtactcatgtgggagatgctcatagaaactcattatag-aatgaatagattgataaaaga |
19063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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