View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4481-Insertion-1 (Length: 977)

Name: NF4481-Insertion-1
Description: NF4481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4481-Insertion-1
NF4481-Insertion-1
[»] chr3 (30 HSPs)
chr3 (8-977)||(43135085-43136054)
chr3 (242-913)||(132206-132850)
chr3 (466-644)||(13023870-13024047)
chr3 (462-647)||(12844527-12844711)
chr3 (462-644)||(12491913-12492095)
chr3 (462-644)||(12021431-12021613)
chr3 (506-647)||(10139754-10139895)
chr3 (506-647)||(10171121-10171262)
chr3 (514-647)||(14683156-14683289)
chr3 (473-618)||(13101847-13101991)
chr3 (462-681)||(22444893-22445099)
chr3 (514-647)||(7341469-7341602)
chr3 (514-647)||(7396215-7396348)
chr3 (514-647)||(13299472-13299605)
chr3 (514-647)||(13310130-13310263)
chr3 (514-615)||(10779006-10779108)
chr3 (514-615)||(10792524-10792626)
chr3 (514-647)||(11887252-11887385)
chr3 (242-322)||(1934433-1934512)
chr3 (242-322)||(14148007-14148086)
chr3 (458-617)||(55002317-55002476)
chr3 (482-605)||(14133338-14133459)
chr3 (486-618)||(14345556-14345687)
chr3 (473-641)||(1934616-1934775)
chr3 (242-309)||(12021209-12021276)
chr3 (127-181)||(37382976-37383030)
chr3 (498-559)||(14000792-14000853)
chr3 (244-329)||(14345326-14345411)
chr3 (242-312)||(22445249-22445319)
chr3 (260-309)||(12844326-12844375)
[»] chr6 (18 HSPs)
chr6 (242-885)||(18257845-18258488)
chr6 (242-923)||(11793818-11794499)
chr6 (242-852)||(16596994-16597592)
chr6 (242-726)||(26460345-26460808)
chr6 (242-696)||(19272062-19272503)
chr6 (491-661)||(19405770-19405942)
chr6 (514-646)||(23496542-23496674)
chr6 (506-648)||(30755528-30755670)
chr6 (514-646)||(23431904-23432036)
chr6 (514-646)||(23490944-23491076)
chr6 (514-648)||(1557690-1557824)
chr6 (506-646)||(19038432-19038572)
chr6 (506-648)||(16209785-16209927)
chr6 (506-646)||(19025389-19025529)
chr6 (242-331)||(19084895-19084984)
chr6 (462-522)||(19084715-19084775)
chr6 (514-600)||(16310110-16310197)
chr6 (260-309)||(19405539-19405588)
[»] chr8 (30 HSPs)
chr8 (242-914)||(15337037-15337708)
chr8 (242-914)||(15426102-15426773)
chr8 (242-914)||(15517406-15518077)
chr8 (242-923)||(22697853-22698511)
chr8 (242-723)||(18735289-18735765)
chr8 (462-655)||(27818173-27818367)
chr8 (462-641)||(15911712-15911890)
chr8 (462-647)||(41438804-41438988)
chr8 (462-647)||(29708126-29708310)
chr8 (462-644)||(22064583-22064765)
chr8 (458-648)||(25388937-25389127)
chr8 (473-618)||(22698700-22698844)
chr8 (514-647)||(17426107-17426240)
chr8 (506-647)||(22352016-22352157)
chr8 (242-330)||(15911969-15912057)
chr8 (514-647)||(20193165-20193298)
chr8 (839-914)||(32116444-32116519)
chr8 (514-647)||(16667965-16668098)
chr8 (506-648)||(12821225-12821367)
chr8 (490-584)||(17637856-17637949)
chr8 (493-603)||(18846786-18846895)
chr8 (242-327)||(18847015-18847100)
chr8 (242-320)||(17839785-17839863)
chr8 (285-331)||(27818485-27818531)
chr8 (482-552)||(16778017-16778087)
chr8 (242-327)||(17637623-17637707)
chr8 (573-641)||(16777947-16778014)
chr8 (242-298)||(41438584-41438640)
chr8 (462-616)||(17839994-17840147)
chr8 (242-318)||(22351743-22351820)
[»] scaffold0190 (1 HSPs)
scaffold0190 (249-929)||(7127-7808)
[»] chr2 (51 HSPs)
chr2 (242-929)||(28567460-28568142)
chr2 (322-929)||(37130111-37130720)
chr2 (242-929)||(23814732-23815413)
chr2 (242-918)||(21256224-21256882)
chr2 (242-913)||(34827376-34828025)
chr2 (242-929)||(23803111-23803786)
chr2 (517-929)||(23870534-23870944)
chr2 (272-575)||(23829610-23829912)
chr2 (517-929)||(22707880-22708291)
chr2 (395-665)||(22593716-22593978)
chr2 (462-660)||(10480359-10480557)
chr2 (376-726)||(16664559-16664903)
chr2 (462-726)||(22880858-22881121)
chr2 (462-641)||(21904931-21905109)
chr2 (462-598)||(23769342-23769478)
chr2 (475-723)||(25349247-25349497)
chr2 (462-647)||(31817908-31818092)
chr2 (462-644)||(39227409-39227591)
chr2 (502-605)||(20524171-20524274)
chr2 (506-648)||(24896625-24896767)
chr2 (514-642)||(22648571-22648699)
chr2 (462-618)||(30089876-30090032)
chr2 (462-618)||(30126481-30126637)
chr2 (490-641)||(30051889-30052039)
chr2 (490-641)||(30142933-30143083)
chr2 (517-642)||(23190265-23190390)
chr2 (517-642)||(23611520-23611645)
chr2 (514-642)||(23203878-23204006)
chr2 (514-642)||(23615122-23615250)
chr2 (242-331)||(10479936-10480027)
chr2 (256-333)||(22593980-22594057)
chr2 (481-605)||(20442248-20442371)
chr2 (242-320)||(20442521-20442599)
chr2 (507-605)||(23995665-23995762)
chr2 (242-320)||(25349023-25349101)
chr2 (526-642)||(22633822-22633938)
chr2 (574-647)||(24967522-24967594)
chr2 (473-605)||(20281119-20281250)
chr2 (256-331)||(23769150-23769222)
chr2 (256-320)||(20280914-20280978)
chr2 (272-320)||(21904751-21904799)
chr2 (934-977)||(19952463-19952506)
chr2 (273-320)||(30126306-30126353)
chr2 (242-309)||(31818248-31818315)
chr2 (474-618)||(25966158-25966301)
chr2 (242-309)||(39227188-39227256)
chr2 (273-320)||(30051687-30051733)
chr2 (273-320)||(30089702-30089748)
chr2 (273-320)||(30142731-30142777)
chr2 (273-320)||(30243901-30243947)
chr2 (242-318)||(24896956-24897033)
[»] chr1 (35 HSPs)
chr1 (242-929)||(4229593-4230285)
chr1 (242-929)||(4361383-4362061)
chr1 (242-852)||(2603232-2603828)
chr1 (242-726)||(21168085-21168563)
chr1 (462-929)||(27901736-27902196)
chr1 (243-739)||(21381790-21382278)
chr1 (258-597)||(27131748-27132077)
chr1 (462-698)||(50826321-50826555)
chr1 (462-644)||(21076556-21076737)
chr1 (462-661)||(23511587-23511787)
chr1 (462-597)||(16406733-16406868)
chr1 (462-647)||(21137648-21137832)
chr1 (462-644)||(21310725-21310907)
chr1 (490-641)||(21550522-21550671)
chr1 (462-644)||(22684596-22684778)
chr1 (506-647)||(29305211-29305352)
chr1 (501-648)||(31845655-31845802)
chr1 (506-648)||(22809065-22809207)
chr1 (242-331)||(16406524-16406613)
chr1 (506-646)||(27561892-27562032)
chr1 (514-641)||(22086398-22086525)
chr1 (506-648)||(1528651-1528793)
chr1 (462-605)||(18530580-18530722)
chr1 (506-615)||(41368663-41368772)
chr1 (637-760)||(27130129-27130256)
chr1 (242-410)||(27902217-27902381)
chr1 (506-615)||(41383570-41383679)
chr1 (242-327)||(21550824-21550908)
chr1 (242-318)||(22794192-22794269)
chr1 (242-318)||(22808805-22808882)
chr1 (242-309)||(21311060-21311128)
chr1 (506-564)||(22794465-22794523)
chr1 (242-317)||(21076882-21076959)
chr1 (267-312)||(22684401-22684446)
chr1 (89-174)||(26273641-26273726)
[»] scaffold0151 (1 HSPs)
scaffold0151 (242-929)||(13880-14563)
[»] scaffold0077 (1 HSPs)
scaffold0077 (242-929)||(12031-12705)
[»] scaffold0168 (1 HSPs)
scaffold0168 (242-929)||(1155-1829)
[»] chr4 (21 HSPs)
chr4 (242-928)||(18566746-18567423)
chr4 (242-720)||(1658509-1658984)
chr4 (376-869)||(10266999-10267484)
chr4 (243-739)||(31079507-31079998)
chr4 (462-668)||(3077903-3078107)
chr4 (462-660)||(49526422-49526621)
chr4 (458-618)||(50687557-50687717)
chr4 (491-644)||(14022415-14022567)
chr4 (514-647)||(18108683-18108816)
chr4 (501-646)||(13277216-13277361)
chr4 (501-646)||(13292594-13292739)
chr4 (506-638)||(14714146-14714278)
chr4 (506-638)||(14775826-14775958)
chr4 (242-331)||(50687833-50687922)
chr4 (526-647)||(14556950-14557071)
chr4 (486-617)||(27812297-27812442)
chr4 (526-647)||(15153638-15153759)
chr4 (242-331)||(49526214-49526306)
chr4 (242-318)||(14713872-14713949)
chr4 (242-298)||(3077685-3077741)
chr4 (260-318)||(14775571-14775629)
[»] chr5 (24 HSPs)
chr5 (244-929)||(10624017-10624704)
chr5 (462-929)||(40932588-40933056)
chr5 (242-923)||(18155866-18156532)
chr5 (272-723)||(20024225-20024668)
chr5 (256-760)||(16831980-16832473)
chr5 (352-457)||(40936793-40936899)
chr5 (506-648)||(21530296-21530438)
chr5 (506-648)||(26274096-26274238)
chr5 (473-618)||(19859548-19859692)
chr5 (519-648)||(21504629-21504758)
chr5 (506-647)||(21982612-21982753)
chr5 (486-618)||(19212397-19212528)
chr5 (514-648)||(20506326-20506460)
chr5 (242-322)||(19212680-19212760)
chr5 (243-310)||(18024605-18024672)
chr5 (248-327)||(26836010-26836088)
chr5 (502-599)||(20249243-20249339)
chr5 (937-977)||(1279874-1279914)
chr5 (242-322)||(20248995-20249074)
chr5 (486-605)||(17432637-17432758)
chr5 (242-309)||(21508133-21508201)
chr5 (242-309)||(21530643-21530711)
chr5 (260-318)||(21982358-21982416)
chr5 (127-181)||(42615047-42615101)
[»] scaffold0480 (1 HSPs)
scaffold0480 (242-929)||(3419-4082)
[»] chr7 (32 HSPs)
chr7 (242-929)||(40342600-40343268)
chr7 (430-929)||(10827729-10828216)
chr7 (430-929)||(11021521-11022008)
chr7 (537-743)||(24876399-24876605)
chr7 (356-760)||(18752532-18752926)
chr7 (633-929)||(13346726-13347023)
chr7 (242-565)||(10864186-10864501)
chr7 (623-929)||(10863885-10864184)
chr7 (462-644)||(11989354-11989536)
chr7 (242-329)||(10827541-10827628)
chr7 (242-329)||(11021333-11021420)
chr7 (462-641)||(41239182-41239358)
chr7 (514-648)||(1978229-1978363)
chr7 (514-648)||(15758551-15758685)
chr7 (506-647)||(14345900-14346041)
chr7 (473-618)||(10478160-10478304)
chr7 (514-647)||(14035878-14036011)
chr7 (481-641)||(18450780-18450938)
chr7 (514-647)||(14323715-14323848)
chr7 (514-647)||(18115234-18115366)
chr7 (514-647)||(18141802-18141934)
chr7 (514-647)||(44277677-44277810)
chr7 (486-615)||(16713255-16713383)
chr7 (486-615)||(17687491-17687619)
chr7 (514-642)||(18174872-18175000)
chr7 (514-605)||(18160102-18160194)
chr7 (272-329)||(10477970-10478027)
chr7 (242-309)||(11989133-11989200)
chr7 (242-318)||(1977967-1978044)
chr7 (242-327)||(16713024-16713107)
chr7 (242-327)||(17687260-17687343)
chr7 (126-181)||(36282450-36282505)
[»] scaffold0096 (1 HSPs)
scaffold0096 (242-927)||(36039-36723)
[»] scaffold0063 (1 HSPs)
scaffold0063 (242-741)||(70533-71027)
[»] scaffold0100 (1 HSPs)
scaffold0100 (242-719)||(8903-9372)
[»] scaffold0012 (1 HSPs)
scaffold0012 (242-760)||(249829-250337)
[»] scaffold0014 (1 HSPs)
scaffold0014 (366-729)||(7337-7689)
[»] scaffold0029 (3 HSPs)
scaffold0029 (486-723)||(101987-102221)
scaffold0029 (370-455)||(101901-101987)
scaffold0029 (242-310)||(101781-101849)
[»] scaffold0770 (3 HSPs)
scaffold0770 (486-723)||(3683-3917)
scaffold0770 (370-455)||(3597-3683)
scaffold0770 (242-310)||(3477-3545)
[»] scaffold0016 (1 HSPs)
scaffold0016 (366-748)||(200014-200384)
[»] scaffold0297 (2 HSPs)
scaffold0297 (462-660)||(8739-8936)
scaffold0297 (242-331)||(2433-2522)
[»] scaffold0059 (2 HSPs)
scaffold0059 (462-717)||(68066-68321)
scaffold0059 (462-717)||(76171-76426)
[»] scaffold0013 (6 HSPs)
scaffold0013 (462-717)||(107335-107591)
scaffold0013 (462-674)||(129123-129335)
scaffold0013 (462-535)||(129875-129948)
scaffold0013 (462-535)||(144706-144779)
scaffold0013 (242-309)||(144932-144999)
scaffold0013 (462-512)||(136016-136066)
[»] scaffold0417 (2 HSPs)
scaffold0417 (464-669)||(1267-1470)
scaffold0417 (243-331)||(1585-1674)
[»] scaffold0053 (1 HSPs)
scaffold0053 (462-647)||(45191-45376)
[»] scaffold0003 (1 HSPs)
scaffold0003 (462-644)||(33296-33477)
[»] scaffold0239 (4 HSPs)
scaffold0239 (462-647)||(16951-17136)
scaffold0239 (506-617)||(5564-5674)
scaffold0239 (242-320)||(250-327)
scaffold0239 (506-588)||(3-84)
[»] scaffold0023 (8 HSPs)
scaffold0023 (462-647)||(6614-6799)
scaffold0023 (506-648)||(62133-62275)
scaffold0023 (506-648)||(71311-71453)
scaffold0023 (506-648)||(84994-85136)
scaffold0023 (506-647)||(22608-22749)
scaffold0023 (462-586)||(116456-116580)
scaffold0023 (242-318)||(62471-62548)
scaffold0023 (242-318)||(71649-71726)
[»] scaffold0019 (3 HSPs)
scaffold0019 (506-647)||(151402-151543)
scaffold0019 (579-647)||(162035-162102)
scaffold0019 (506-564)||(161747-161805)
[»] scaffold0060 (2 HSPs)
scaffold0060 (491-647)||(32065-32221)
scaffold0060 (260-309)||(32403-32452)
[»] scaffold0362 (1 HSPs)
scaffold0362 (462-644)||(11291-11473)
[»] scaffold0216 (1 HSPs)
scaffold0216 (462-644)||(19928-20110)
[»] scaffold0046 (2 HSPs)
scaffold0046 (506-647)||(30579-30720)
scaffold0046 (242-309)||(30916-30984)
[»] scaffold0740 (1 HSPs)
scaffold0740 (514-647)||(5621-5754)
[»] scaffold0509 (3 HSPs)
scaffold0509 (462-647)||(1177-1362)
scaffold0509 (462-647)||(7605-7790)
scaffold0509 (260-309)||(976-1025)
[»] scaffold0108 (2 HSPs)
scaffold0108 (506-646)||(23017-23157)
scaffold0108 (506-642)||(44197-44333)
[»] scaffold0282 (2 HSPs)
scaffold0282 (506-648)||(8760-8902)
scaffold0282 (260-309)||(8505-8554)
[»] scaffold0304 (1 HSPs)
scaffold0304 (506-647)||(5781-5922)
[»] scaffold0101 (2 HSPs)
scaffold0101 (514-647)||(50915-51048)
scaffold0101 (514-647)||(46277-46410)
[»] scaffold0081 (1 HSPs)
scaffold0081 (506-646)||(44262-44402)
[»] scaffold0022 (1 HSPs)
scaffold0022 (506-646)||(58491-58631)
[»] scaffold0001 (5 HSPs)
scaffold0001 (501-648)||(390070-390217)
scaffold0001 (506-648)||(25090-25232)
scaffold0001 (506-648)||(28588-28730)
scaffold0001 (506-648)||(115347-115489)
scaffold0001 (506-648)||(129899-130040)
[»] scaffold0358 (2 HSPs)
scaffold0358 (506-648)||(15703-15845)
scaffold0358 (242-318)||(16019-16096)
[»] scaffold0171 (1 HSPs)
scaffold0171 (473-604)||(26897-27027)
[»] scaffold0035 (2 HSPs)
scaffold0035 (490-641)||(25739-25888)
scaffold0035 (242-327)||(25502-25586)
[»] scaffold0504 (2 HSPs)
scaffold0504 (242-320)||(373-451)
scaffold0504 (564-641)||(683-759)
[»] scaffold0241 (1 HSPs)
scaffold0241 (511-648)||(25069-25206)
[»] scaffold0270 (2 HSPs)
scaffold0270 (511-647)||(8085-8221)
scaffold0270 (511-647)||(15215-15351)
[»] scaffold0130 (3 HSPs)
scaffold0130 (514-642)||(39853-39981)
scaffold0130 (506-648)||(29342-29484)
scaffold0130 (514-647)||(28538-28671)
[»] scaffold0126 (2 HSPs)
scaffold0126 (242-327)||(28812-28896)
scaffold0126 (486-644)||(31206-31362)
[»] scaffold0058 (1 HSPs)
scaffold0058 (462-618)||(14986-15141)
[»] scaffold1496 (1 HSPs)
scaffold1496 (490-641)||(1396-1545)
[»] scaffold0026 (3 HSPs)
scaffold0026 (514-648)||(118376-118510)
scaffold0026 (514-648)||(142226-142360)
scaffold0026 (242-318)||(118100-118177)
[»] scaffold0021 (2 HSPs)
scaffold0021 (506-648)||(18500-18642)
scaffold0021 (506-648)||(28031-28173)
[»] scaffold0040 (1 HSPs)
scaffold0040 (514-647)||(41324-41457)
[»] scaffold0795 (1 HSPs)
scaffold0795 (798-929)||(1982-2114)
[»] scaffold0323 (1 HSPs)
scaffold0323 (514-647)||(4505-4638)
[»] scaffold0080 (1 HSPs)
scaffold0080 (506-646)||(2422-2562)
[»] scaffold0064 (1 HSPs)
scaffold0064 (506-642)||(43120-43256)
[»] scaffold0005 (2 HSPs)
scaffold0005 (506-638)||(63772-63904)
scaffold0005 (260-318)||(64101-64159)
[»] scaffold0423 (1 HSPs)
scaffold0423 (537-647)||(1721-1831)
[»] scaffold0193 (1 HSPs)
scaffold0193 (506-648)||(26778-26920)
[»] scaffold0093 (2 HSPs)
scaffold0093 (272-327)||(43451-43505)
scaffold0093 (486-559)||(43653-43726)
[»] scaffold0253 (1 HSPs)
scaffold0253 (514-647)||(15332-15465)
[»] scaffold0107 (1 HSPs)
scaffold0107 (514-553)||(32202-32241)


Alignment Details
Target: chr3 (Bit Score: 786; Significance: 0; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 786; E-Value: 0
Query Start/End: Original strand, 8 - 977
Target Start/End: Original strand, 43135085 - 43136054
Alignment:
Q  8 acaataacataataagtttgctcttcacaatgatgtcatcaatctatgctaggcgtaaaggtggggtattgaaattatggacggttccaccatctggcga 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43135085 acaataacataataagtttgctattcacaatgatgtcatcaatctatgctaggcgtaaaggtagggtattgaaattatggacggttccaccatctggcga 43135184  T
Q  108 tcctggacattcgtccaagctcaatcgctcctttctttatatatggtccaatccaatagcccattaatccacttnnnnnnnnttgggcaaattctgaaat 207  Q
     |||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||| ||||||| ||||||        ||||||||||||||||||    
T  43135185 ccctggacattcgtccaagctcaatcgatactttctttatatatggcccaatgcaatagtccattaacccacttaaaaaaaattgggcaaattctgaaat 43135284  T
Q  208 ttctttcaagcgcgttgtttacactgannnnnnn-gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatatt 306  Q
    |||| ||||||||| |||||||| |||        |||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  43135285 ttctctcaagcgcgctgtttacattgattttttttgtaaacaaccgctgatttaaaaatatttatttgcaagatcaaccaataaatcttaaggacatatt 43135384  T
Q  307 gtgtttgttatttttcagaaatttaatgttattcttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcg 406  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43135385 gtgtttgttattttccagaaatttaatgttattcttgaagaatcttgataaataaaagaaagtaaaaaacaatcgaattcaaccctgttgaactcaatcg 43135484  T
Q  407 aaatcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattga 506  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43135485 aaatcggtgtaaataacggtaaatgaattgttcaaaagaaacaagtaaattgtatattgcaaagacatttaagaaaatgaacttaaattgtattgattga 43135584  T
Q  507 atgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtt 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43135585 atgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtg 43135684  T
Q  607 acccttttttccctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatc 706  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43135685 accttttttttcctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatc 43135784  T
Q  707 cattcgatttgaatttcgaacgtgtcttgaaaatatccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaa 806  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43135785 cattcaatttgaatttcgaacgtgtcttgaaaatatccgttgcttgaccttatctgaattcagaacaaaaatgccctttgataactttctgtctgtcgaa 43135884  T
Q  807 ccgaaacacacgctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcatta 906  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43135885 ccgaaacacacgctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttcaatgataaggtcaacctattttgactgcatta 43135984  T
Q  907 aatgataaccttaaaaatattgggctaacacgcgcacaacagaaacacattcttcttcttcagctctctgc 977  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  43135985 aatgataaccttaaaaatatt-ggctaacacacgtacaacagaaacacattcttcttcttcagctctctgc 43136054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 242 - 913
Target Start/End: Original strand, 132206 - 132850
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||| | ||||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||  ||||||||||||||| ||||    
T  132206 gtaaacaaccgttggtttaaaaatatttacttgcaagatcaaccagtaaatcttagcgacatattgtgtttgttatttc-cagaaatttaatgttgttct 132304  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaa 441  Q
    ||||| | |||||||||   ||||||||||||| ||||| |||||||||||||||||||||||||      ||||||||||   ||||||||||| ||||    
T  132305 tgaagaa-cttgataaa---aagaaagtaaaaagcaatcaaattcaacccagttgaactcaatcgt-----gtgtaaataaaagtaaatgaattgctcaa 132395  T
Q  442 aagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaact 541  Q
    |||||||||||||||||       ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  132396 aagaaacaagtaaattg-------caaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaact 132488  T
Q  542 tgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaa-ctactatttata 640  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  132489 tgtgactcgtttctctcttccatgcaaataatttgcgtgtaagttttttgtatgattgaattgtgaccctttttt-cctagggaaaagctactatttata 132587  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
     |||||||||||||| |||| ||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||    
T  132588 taaatagaaataactacctaaatttgaatttaaatctataactgcagtaaactaacaatatttatccattcgatttgaatttcgaatgtgtcttggaaat 132687  T
Q  741 atccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagt 840  Q
    ||| ||| ||||||||||||        ||| |||| ||||||| ||  | ||||  | ||||||||||| |||| ||||||| ||| ||| ||||||||    
T  132688 atctgttacttgaccttatc--------caa-aaaattgcccttcga-gagtttccatttgtcgaaccgacacacgcgctttcgagtatctccagcaagt 132777  T
Q  841 ccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgata 913  Q
    |||||||||||| |||||| |  |||||||||||||| ||||||||| |||||||| |||||||| |||||||    
T  132778 ccaacttcgataagaatgagataacaatttcttcgattataaggtcaacctattttaactgcatttaatgata 132850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 466 - 644
Target Start/End: Complemental strand, 13024047 - 13023870
Alignment:
Q  466 caaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatg 565  Q
    |||| ||||||||  ||||| | | |||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||   |  |||||||     
T  13024047 caaaaacatttaaagaaatgtattgaaattgaattgattgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtcagtggcttccata 13023948  T
Q  566 cggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||| ||||||||||    
T  13023947 cggacaatttgagtgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactttttatacaaa 13023870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 12844527 - 12844711
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| ||||||||||||||| |||||  |||| |||||||||| |||||||| |||||||  || ||||    
T  12844527 attgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgtacattttcatacattgcaacttgtaactcgttagtcgcttc 12844626  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||| | |||||| |||||||||| ||||||||||||||| ||||  ||||||||| | |||||||||||||||| ||||||    
T  12844627 catacggacagtttgagcgtaagtttttagtatgattgaattgtgaccc-attttccctaagaaaaactactatttatataaatag 12844711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 462 - 644
Target Start/End: Complemental strand, 12492095 - 12491913
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||| |||||  ||||| | | |||||| ||||| |||||  || ||||| |||||||||||||||| ||||||||||||||||| || ||||    
T  12492095 attgcaaagacgtttaaagaaatgtattcaaattgcattgactgaataaaagttggtgcacatgttcatacattgcaacttgtgactcgtttgtcgcttc 12491996  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||| | | || ||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||||||||||    
T  12491995 catacggacattatttagtgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaa 12491913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 462 - 644
Target Start/End: Original strand, 12021431 - 12021613
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | ||||||   ||| ||||||||| ||||| ||||| |||||||||| |||||||||||| |||| || ||||    
T  12021431 attgcaaagacatttaaagaaatgtattgaaattgccatgactgaatgtaagttggtgcacatattcatacattgcaacttgtgacttgtttgtcgcttc 12021530  T
Q  562 catgcggataa-tttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| || | || ||||||||||||||||| ||||||||||||||| | ||| |||| |||| | ||||||||||||||||||||    
T  12021531 catacgaacaattttgagtgtaagtttttagtatgattgaattgtga-cctctttttcctaagaaaaactactatttatacaaa 12021613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 506 - 647
Target Start/End: Complemental strand, 10139895 - 10139754
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  10139895 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 10139796  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||| ||||| |||| | |||||||||||||||||||||||    
T  10139795 tgacccgttttt-cctaagaaaaactactatttatacaaatag 10139754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 506 - 647
Target Start/End: Complemental strand, 10171262 - 10171121
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  10171262 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 10171163  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||| ||||| |||| | |||||||||||||| ||||||||    
T  10171162 tgacccgttttt-cctaagaaaaactactatttacacaaatag 10171121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 14683156 - 14683289
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| ||||||    
T  14683156 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccctt 14683255  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  14683256 tttt-cctaagaaaaactactatttatacagatag 14683289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 473 - 618
Target Start/End: Complemental strand, 13101991 - 13101847
Alignment:
Q  473 atttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataa 572  Q
    |||||||||||  ||||||||||  ||||||||||||||||||||||||||  || ||||||| | |||||| ||||||||||||| |  |||||||||     
T  13101991 atttaagaaaacaaacttaaattacattgattgaatgtaaattggtacacagatttatacatttcgacttgtaactcgtttctctc-taaatgcggatag 13101893  T
Q  573 tttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
    |||||||||| ||||| |||||| ||||| ||| |||| |||||||    
T  13101892 tttgagtgtatgttttctgtatggttgaactgtgacccgtttttcc 13101847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 462 - 681
Target Start/End: Complemental strand, 22445099 - 22444893
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  |||||||||||||||| ||||| | ||||||| ||||||||||  |||||||||| |||||||| ||                  
T  22445099 attgcaaagacatttaaagaaatgaacttaaattggattgactaaatgtaagttggtacacaaattcatacattgcaacttgtaac-------------- 22445014  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaa-actactatttatac-aaataga-aataactgcc 658  Q
      | |||||| |||||  ||||||||||  |||||||||||||| ||||||||||||  ||  ||| | |||||||||||| ||||||| ||||||||||    
T  22445013 --tacggatagtttgaacgtaagtttttaatatgattgaattgtgacccttttttcctaagaaaaataatactatttatacaaaatagagaataactgcc 22444916  T
Q  659 tagatttgaatttaaaactataa 681  Q
    |||||||||||||||||||||||    
T  22444915 tagatttgaatttaaaactataa 22444893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 7341469 - 7341602
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | ||||| |||||||||| ||||||||||||||| | ||||    
T  7341469 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtga-cctt 7341567  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  7341568 tttttcctaagaaaaactactatttatacagatag 7341602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 7396215 - 7396348
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | ||||| |||||||||| ||||||||||||||| | ||||    
T  7396215 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtga-cctt 7396313  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  7396314 tttttcctaagaaaaactactatttatacagatag 7396348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 13299472 - 13299605
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||| ||||| ||||||| || ||||||||||||| ||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  13299472 ttggtgcacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccct 13299571  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  13299572 tttt-cctaagaaaaactactatttatacagatag 13299605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 13310130 - 13310263
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||| ||||| ||||||| || ||||||||||||| ||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  13310130 ttggtgcacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccct 13310229  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  13310230 tttt-cctaagaaaaactactatttatacagatag 13310263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 514 - 615
Target Start/End: Complemental strand, 10779108 - 10779006
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| ||||||    
T  10779108 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccctt 10779009  T
Q  613 ttt 615  Q
    |||    
T  10779008 ttt 10779006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 514 - 615
Target Start/End: Complemental strand, 10792626 - 10792524
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| ||||||    
T  10792626 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacactattgagtgtaagtttttagtatgattgaattgtgaccctt 10792527  T
Q  613 ttt 615  Q
    |||    
T  10792526 ttt 10792524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 514 - 647
Target Start/End: Complemental strand, 11887385 - 11887252
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||  ||||||||||||||| |||| |    
T  11887385 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttaagtatgattgaattgtgaccc-t 11887287  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    ||||||  ||  |||||||||||||||||| ||||    
T  11887286 ttttcctaagaaaaaactactatttatacagatag 11887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 1934433 - 1934512
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttc 322  Q
    |||||| |||| | ||||||||||| ||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  1934433 gtaaacgaccgttggtttaaaaatagttacttgcaagatcaaccagtaaatctt-aggacatagtgtgtttgttatttttc 1934512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 14148086 - 14148007
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttc 322  Q
    ||||||||||||| ||||| ||||  ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  14148086 gtaaacaaccgctggtttacaaatggttacttgcaagatcaaccagtaaatcttaa-gacatattgtgtttgttgtttttc 14148007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 458 - 617
Target Start/End: Original strand, 55002317 - 55002476
Alignment:
Q  458 gtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtga-ctcgtttctc 556  Q
    ||||||||||||   |||||||||||  || |||||||| |||||||||| ||| |||| ||||||  ||||||||||   |||||| | ||| | | ||    
T  55002317 gtagattgcaaatgaatttaagaaaacaaatttaaattgcattgattgaaagtagattgatacacagattcatacattgtgacttgtaaactcatctgtc 55002416  T
Q  557 tcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttc 617  Q
    |||   ||||||||| |||| |||||||||||||||||||||||||||| |||| ||||||    
T  55002417 tctaa-atgcggatagtttgcgtgtaagttttttgtatgattgaattgtgacccgtttttc 55002476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 482 - 605
Target Start/End: Complemental strand, 14133459 - 14133338
Alignment:
Q  482 aatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgt 581  Q
    ||||||||||||||  ||  |||||||||| ||||||||| |  ||||||||||   |||||| ||||||||||||| |  ||||||||| ||||||| |    
T  14133459 aatgaacttaaatttcataaattgaatgtatattggtacatagattcatacattgtgacttgttactcgtttctctc-tgaatgcggatagtttgagtat 14133361  T
Q  582 aagttttttgtatgattgaattgt 605  Q
    ||||||||| ||||||||||||||    
T  14133360 aagtttttt-tatgattgaattgt 14133338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 486 - 618
Target Start/End: Original strand, 14345556 - 14345687
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt 585  Q
    ||||||||||| |||||||||||||||||| |||||||  ||||||||||   |||| | ||||||||||||| |  ||| ||||| ||||||  |||||    
T  14345556 aacttaaattgcattgattgaatgtaaattagtacacaaattcatacattttgacttataactcgtttctctc-taaatgtggatagtttgagcataagt 14345654  T
Q  586 tttttgtatgattgaattgttacccttttttcc 618  Q
    ||| ||| |  ||||||||| |||| |||||||    
T  14345655 tttctgtgtagttgaattgtgacccgtttttcc 14345687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 473 - 641
Target Start/End: Original strand, 1934616 - 1934775
Alignment:
Q  473 atttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataa 572  Q
    |||||| | ||| ||||||||||| ||  ||||||||||| ||||||||||  |||||| |||   |||||| ||||||||||||||        ||  |    
T  1934616 atttaaaagaataaacttaaattgcataaattgaatgtaagttggtacacagattcatatattgtgacttgttactcgtttctctct--------gaata 1934707  T
Q  573 tttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
     ||||||||||||||| | |||||||||||||| | ||| |||| |||| | |||||||||||||||||    
T  1934708 cttgagtgtaagttttatatatgattgaattgtga-cctatttttcctatgaaaaactactatttatac 1934775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 12021209 - 12021276
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||||| |||| |||| ||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  12021209 gtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 12021276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 37383030 - 37382976
Alignment:
Q  127 ctcaatcgctcctttctttatatatggtccaatccaatagcccattaatccactt 181  Q
    |||||||| | |||||| |||||||||||||| ||||||||||||||| ||||||    
T  37383030 ctcaatcgatactttctgtatatatggtccaacccaatagcccattaacccactt 37382976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 559
Target Start/End: Complemental strand, 14000853 - 14000792
Alignment:
Q  498 attgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctct 559  Q
    ||||||| ||||||||||||||||||  |||||| ||||  |||||| ||||||||||||||    
T  14000853 attgattaaatgtaaattggtacacagattcatatattatgacttgttactcgtttctctct 14000792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 14345326 - 14345411
Alignment:
Q  244 aaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatt 329  Q
    |||||| |||| |||||||| || ||| ||||||||| ||  ||||||||||  ||||||||| |||||||||||||  |||||||    
T  14345326 aaacaatcgctggtttaaaattaattacttgcaagataaactagtaaatctttgggacatattatgtttgttattttctagaaatt 14345411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 22445319 - 22445249
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt 312  Q
    |||||||| || | |||| ||||| |||| ||||||||||||  |||||||||||||  ||||||||||||    
T  22445319 gtaaacaatcgttggttttaaaatgtttacttgcaagatcaactagtaaatcttaagagcatattgtgttt 22445249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 12844326 - 12844375
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  12844326 aaaaatgtttacttgcaagatcaaccagtaaatcttaagatcatattgtg 12844375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 450; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 242 - 885
Target Start/End: Original strand, 18257845 - 18258488
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    |||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  18257845 gtaaacaaccgctagtttaaaaatatttacctacaaggtcaatcagtaaatcttaaggatatattgtgtttgttattttccagaaatttaatgttattct 18257944  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaa 441  Q
    ||||| |||||||||||||||||||||||||||  ||| ||||||||||| ||||||| |||||||||||||||||||| ||  ||||||||||||||||    
T  18257945 tgaagaatcttgataaataaaagaaagtaaaaagaaattgaattcaacccggttgaac-caatcgaaatcggtgtaaatgacggtaaatgaattgttcaa 18258043  T
Q  442 aagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaact 541  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  18258044 aagaaacaaataaattgtagattgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatgtaaattgatacacatgttcatacattgcaact 18258143  T
Q  542 tgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||||| ||||||||||  ||| |||||||||||||||||||    
T  18258144 tgtgactcgtttctctctttcatgcggataatttgagtgtaacttttttgtattaatgaattgtgaccctttttt-tctaaggaaaactactatttatac 18258242  T
Q  642 aaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttg-aaaat 740  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  18258243 aaatagaaataactgcctagatttgaatttaaaactataactgcaatatactaactatacttatccattcgatttgaatttcgaatgtgtcttgaaaaat 18258342  T
Q  741 atccgttgc-ttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaag 839  Q
    | ||||||| |||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| || ||||    
T  18258343 acccgttgctttgaccttatctaaatccataacaaaactgccctttgataactttctgtctgtcgaaccgaaacacgcgctttcgagtatctccaacaag 18258442  T
Q  840 tccaacttcgataggaatgaaaagacaatttcttcgatgataaggt 885  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  18258443 tccaacttcgataggaatgagaagacaacttcttcgatgataaggt 18258488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 242 - 923
Target Start/End: Complemental strand, 11794499 - 11793818
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatatt-gtgttt-gttatttttcagaaatttaatgttatt 339  Q
    |||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||| |||||||| ||||||||| ||||| ||    
T  11794499 gtaaacaaccgctgatttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacttatttgtgttttgttattttccagaaatttgatgttgtt 11794400  T
Q  340 cttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttc 439  Q
    |||| || | |||||||||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||   ||||||||||| ||    
T  11794399 cttggagaa-cttgataaataaaagaaattaaaaagcaatcgaattcaacccagtttaacccaatcgaaatcggtgtaaataaaggtaaatgaattgctc 11794301  T
Q  440 aaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaa 539  Q
    |||||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  11794300 aaaagagacaagtcaattgtaaattgcagagacatttaagaaaatgaacttaaattgtattgattgaatgtaagttggtacacatgttcatacattgcaa 11794201  T
Q  540 cttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttat 639  Q
    ||||||| |||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||| |||||||||||||||||    
T  11794200 cttgtgattcgtttatatcttccatgcggataatttgagtgtaaattttttgtataattgaattgtgaccctttttt-cctatggaaaactactatttat 11794102  T
Q  640 acaaatagaaataactgcctagatttgaatttaaaactataattgcagt-aaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaa 738  Q
    ||| ||||||||||||||||| |||||||||||||||||||| |||| | |||||||||| | ||||||||||||||| ||||||||| |||||||||||    
T  11794101 acatatagaaataactgcctacatttgaatttaaaactataactgcaataaaactaactacatttatccattcgatttaaatttcgaatgtgtcttgaaa 11794002  T
Q  739 atatccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaa 838  Q
    ||||||||||||||||| ||| || || | ||||||||  |||||| |||||| |||||||| |||||| ||||||||||  ||| ||| ||| |||| |    
T  11794001 atatccgttgcttgaccctatttg-atccccaacaaaaccgcccttcgataaccttctgtctctcgaactgaaacacacgtattcgagtatctccagcga 11793903  T
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataaccttaaaaa 923  Q
     ||||||||| |||| || || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11793902 atccaacttcaatagaaacgagaagacaatttcttcgatgataaggtcaacctattttgactgcattaaatgataaccttaaaaa 11793818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 294; E-Value: 1e-164
Query Start/End: Original strand, 242 - 852
Target Start/End: Original strand, 16596994 - 16597592
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |    
T  16596994 gtaaataaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgttattttctagaaatttaatgttattat 16597093  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaa 441  Q
    ||||| | |||||||||||||||||| |||||| ||||||||||||||| |||||||  |||||||||| || ||||| ||   |||||| |||  | ||    
T  16597094 tgaagaa-cttgataaataaaagaaattaaaaagcaatcgaattcaacc-agttgaatccaatcgaaattggagtaaaaaaaagtaaatgtattacttaa 16597191  T
Q  442 aagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaact 541  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  16597192 aagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaact 16597284  T
Q  542 tgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| | ||| |||||| |||| ||||||||||  |||||    
T  16597285 tgtcactcgtttctttcttccatgcggataatttgagtgtaagttttttatatgattggattgtca-cctgttttccttaggaaaaactactacgtatac 16597383  T
Q  642 aaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaata 741  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||||||| | ||||||||||| ||||||||||||||| ||| |||| |||||    
T  16597384 aaatagaaataactacctagatttgaatttaaaactataactgtagtaaactaacaacacttatccatttgatttgaatttcgaatgtgccttgcaaata 16597483  T
Q  742 tccgtt-gcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagt 840  Q
    |||||| || ||||||||||  ||  || ||||||| ||| ||| ||||||||| || ||||||||| ||||| | ||| ||| ||  ||| ||||||||    
T  16597484 tccgttggcatgaccttatc-caagacaaaacaaaactgctcttcgataacttt-tgcctgtcgaactgaaacgcgcgc-ttcgagcatctccagcaagt 16597580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 242 - 726
Target Start/End: Original strand, 26460345 - 26460808
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    |||||||||| || ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| || ||| ||          |    
T  26460345 gtaaacaaccactggtttaaaaatatttacttgcaagatcaaccggtaaatcttaaggacatattgtgtttgttattttccaaaaagttt---------t 26460435  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaa-tgaattgttca 440  Q
    ||||| | |||||||||   ||||| ||||||||||||| || |||||||||||||| ||||||||| |     ||||| |   |||| ||||||| |||    
T  26460436 tgaagaa-cttgataaa---aagaa-gtaaaaaacaatcaaactcaacccagttgaattcaatcgaagttatgttaaatgaaagtaaaatgaattgctca 26460530  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  26460531 aaagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaac 26460623  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggga-aaactactatttat 639  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||| |||    ||||||| | || ||||||||||||||    
T  26460624 ttgtgactcgtttatctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgacc--actttcccttgcgagaaactactatttat 26460721  T
Q  640 acaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaa 726  Q
    || ||||||||||||| |||| |||||||||| |||||| || |||  ||||||||| |||||||||||||||||||||||||||||    
T  26460722 actaatagaaataactacctatatttgaatttgaaactacaactgctataaactaacaatacttatccattcgatttgaatttcgaa 26460808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 242 - 696
Target Start/End: Original strand, 19272062 - 19272503
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | || ||||    
T  19272062 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttattttccagaaatttagtattgttct 19272161  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaat--aaccataaatgaattgttc 439  Q
    ||||| | |||||||||    |||||||||||| ||||||||||||||||| | ||| ||||||| | |   ||||||   ||    ||||  |||| ||    
T  19272162 tgaagaa-cttgataaa----agaaagtaaaaagcaatcgaattcaacccaatcgaattcaatcggagtta-tgtaaaacgaaagtaaaatagattgctc 19272255  T
Q  440 aaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaa 539  Q
    |||||||||||||||||||||       ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |||    
T  19272256 aaaagaaacaagtaaattgta-------aagacgtttaagaaaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacatg-caa 19272347  T
Q  540 cttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggga-aaactactattta 638  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||   ||||| || | || |||||||||||||    
T  19272348 cttgtgactcgtttctctcttccatgcagataatttgagtgtaagttttgtgtatgattggattgtgacc--gttttctcttgcgagaaactactattta 19272445  T
Q  639 tacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaac 696  Q
    ||| |||||| |||||| ||||  |||||||||||||||| || |||  |||||||||    
T  19272446 tactaatagacataactacctatgtttgaatttaaaactacaactgctataaactaac 19272503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 491 - 661
Target Start/End: Original strand, 19405770 - 19405942
Alignment:
Q  491 aaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt 589  Q
    |||||| ||||| | |||| || ||||| ||||||||||||| || ||||||||||||||||| || ||||||| |||| | | ||||||||||||||||    
T  19405770 aaattgcattgacttaatgaaagttggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttt 19405869  T
Q  590 tgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaata--gaaataactgcctag 661  Q
     ||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||  ||||||||| |||||    
T  19405870 agtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaatagggaaataactacctag 19405942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 514 - 646
Target Start/End: Complemental strand, 23496674 - 23496542
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||||| | |||||||||||||||| ||||||||||||||| |||| |    
T  23496674 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccgt 23496575  T
Q  613 ttttccctagggaaaactactatttatacaaata 646  Q
    |||| |||| | ||||||||||||||||||||||    
T  23496574 tttt-cctaagaaaaactactatttatacaaata 23496542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 30755528 - 30755670
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| ||| |||||||||||||||  ||||||||||||||    
T  30755528 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattg 30755627  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||||||||||||||||||||||    
T  30755628 tgacccgttttt-cctaagaaaaactactatttatacaaataga 30755670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 514 - 646
Target Start/End: Complemental strand, 23432036 - 23431904
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| || | ||| |||||||||||||||| ||||||||||||||| |||| |    
T  23432036 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgaacaatattgagtgtaagtttttagtatgattgaattgtgacccgt 23431937  T
Q  613 ttttccctagggaaaactactatttatacaaata 646  Q
    |||| |||| | ||||||||||||||||||||||    
T  23431936 tttt-cctaagaaaaactactatttatacaaata 23431904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 514 - 646
Target Start/End: Complemental strand, 23491076 - 23490944
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  23491076 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggaaagtattgagtgtaagtttttagtatgattgaattgtgacccgt 23490977  T
Q  613 ttttccctagggaaaactactatttatacaaata 646  Q
    |||| |||| | ||||||||||||||||||||||    
T  23490976 tttt-cctaagaaaaactactatttatacaaata 23490944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 514 - 648
Target Start/End: Original strand, 1557690 - 1557824
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||||||||||| || ||||||||||||||||| || ||||||| |||| ||| |||||||||||||||  ||||||||||||||| | |||     
T  1557690 ttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtga-cctc 1557788  T
Q  613 ttttccctagggaaaactactatttatacaaataga 648  Q
    |||| |||| | |||||||||||||||||| |||||    
T  1557789 tttttcctaagaaaaactactatttatacagataga 1557824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 506 - 646
Target Start/End: Original strand, 19038432 - 19038572
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| ||| |||||||||||||||| ||||||||||||||    
T  19038432 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattg 19038531  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaata 646  Q
    | |||| ||||| | || | |||||| |||||||||||||||    
T  19038532 tgacccgttttt-cttaagaaaaacttctatttatacaaata 19038572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 16209927 - 16209785
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || |||||||  ||| | | |||||||||||||||| ||||||||||| ||    
T  16209927 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatatggacagtattgagtgtaagtttttagtatgattgaactg 16209828  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||||||||||||||||||||||    
T  16209827 tgacccgttttt-cctaagaaaaactactatttatacaaataga 16209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 506 - 646
Target Start/End: Original strand, 19025389 - 19025529
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  19025389 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 19025488  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaata 646  Q
    | |||| ||||| | || | |||||| |||||||||||||||    
T  19025489 tgacccgttttt-cttaagaaaaacttctatttatacaaata 19025529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 19084984 - 19084895
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattta 331  Q
    ||||||||  ||| |||||||| || ||| |||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||||||    
T  19084984 gtaaacaatagctggtttaaaattaattacttgcaagatcaacctgtaaatcttaaggacatattgtttttgttattttccagaaattta 19084895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 462 - 522
Target Start/End: Complemental strand, 19084775 - 19084715
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacac 522  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  19084775 attgcaaagacaattaagaaaataaacttaaattgcattgattgaatgtaaattggtacac 19084715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 514 - 600
Target Start/End: Original strand, 16310110 - 16310197
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattga 600  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||    
T  16310110 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattga 16310197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 19405539 - 19405588
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  19405539 aaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 19405588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 449; Significance: 0; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 242 - 914
Target Start/End: Complemental strand, 15337708 - 15337037
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15337708 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaactaggaaatcttaaggacatattgtgtttgttattttctagaaatttaatgttattct 15337609  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaac-aatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    ||||| | || ||||| ||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||    
T  15337608 tgaagaacct-gataagtaaaagaaagtaaaaaggtaatcgaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatga-ttgctca 15337511  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15337510 aaagaaacaagtaaattgtaaattgcaaagacttttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaac 15337411  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  15337410 ttgtgactcgttgctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtga-tcttttttccctagggaaaactactatttata 15337312  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15337311 caaatagaaattactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttgaaaat 15337212  T
Q  741 atccgttgcttgaccttatctgaattcacaacaaaaa--tgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaa 838  Q
    ||| ||||||||||||||||||||  |||||||||||  || |||| |||||||||| | |||||||||  |||||||||||||| ||| | || | |||    
T  15337211 atctgttgcttgaccttatctgaa-ccacaacaaaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatttttatcaa 15337113  T
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataa 914  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  15337112 gtccaacttcgataggaatgagaaaacaatttcttcgatgataagatcaacctattttgactgcattaaatgataa 15337037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 242 - 914
Target Start/End: Complemental strand, 15426773 - 15426102
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15426773 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaactaggaaatcttaaggacatattgtgtttgttattttctagaaatttaatgttattct 15426674  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaac-aatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    ||||| | || ||||| ||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||    
T  15426673 tgaagaacct-gataagtaaaagaaagtaaaaaggtaatcgaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatga-ttgctca 15426576  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15426575 aaagaaacaagtaaattgtaaattgcaaagacttttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaac 15426476  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  15426475 ttgtgactcgttgctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtga-tcttttttccctagggaaaactactatttata 15426377  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15426376 caaatagaaattactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttgaaaat 15426277  T
Q  741 atccgttgcttgaccttatctgaattcacaacaaaaa--tgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaa 838  Q
    ||| ||||||||||||||||||||  |||||||||||  || |||| |||||||||| | |||||||||  |||||||||||||| ||| | || | |||    
T  15426276 atctgttgcttgaccttatctgaa-ccacaacaaaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatttttatcaa 15426178  T
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataa 914  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  15426177 gtccaacttcgataggaatgagaaaacaatttcttcgatgataagatcaacctattttgactgcattaaatgataa 15426102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 242 - 914
Target Start/End: Complemental strand, 15518077 - 15517406
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15518077 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaactaggaaatcttaaggacatattgtgtttgttattttctagaaatttaatgttattct 15517978  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaac-aatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    ||||| | || ||||| ||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||    
T  15517977 tgaagaacct-gataagtaaaagaaagtaaaaaggtaatcgaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatga-ttgctca 15517880  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15517879 aaagaaacaagtaaattgtaaattgcaaagacttttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaac 15517780  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  15517779 ttgtgactcgttgctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtga-tcttttttccctagggaaaactactatttata 15517681  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15517680 caaatagaaattactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttgaaaat 15517581  T
Q  741 atccgttgcttgaccttatctgaattcacaacaaaaa--tgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaa 838  Q
    ||| ||||||||||||||||||||  |||||||||||  || |||| |||||||||| | |||||||||  |||||||||||||| ||| | || | |||    
T  15517580 atctgttgcttgaccttatctgaa-ccacaacaaaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatttttatcaa 15517482  T
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataa 914  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  15517481 gtccaacttcgataggaatgagaaaacaatttcttcgatgataagatcaacctattttgactgcattaaatgataa 15517406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 242 - 923
Target Start/End: Original strand, 22697853 - 22698511
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattc 340  Q
    |||||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||     
T  22697853 gtaaacaatcgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgttttgttattttccagaaatttaatattatt- 22697951  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    |||||| | | |||||||              || ||||||||||||||| |||||||| ||||||||| ||||||||||||   ||||||||||  |||    
T  22697952 ttgaagaa-cgtgataaa--------------aagcaatcgaattcaacctagttgaacccaatcgaaagcggtgtaaataaaggtaaatgaattactca 22698036  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||    
T  22698037 aaagaaacaagtaaattgtagactgccaagacatttaagaaaatgaacttaaaatgtattgattgactgtaaattggtacacatgttcatacattgcaac 22698136  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  22698137 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgaccctttttt-cctagggaaaactactatttata 22698235  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
    |||||||||||||| |||||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |    
T  22698236 caaatagaaataaccgcctagatttgaattttaaacttttactgcagtaaactaactatacttatccattcgatttgaatttcgaatgtgtcttggaagt 22698335  T
Q  741 atccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaag 839  Q
    ||||||||  |||||||||||        ||| |||| || | ||||| |  |||||   ||||||||||| |||  |||||||| |  ||| |||||||    
T  22698336 atccgttgttttgaccttatc--------caaaaaaactgtcttttgagagttttctacttgtcgaaccgagacatgcgctttcaggcatctccagcaag 22698427  T
Q  840 tccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataaccttaaaaa 923  Q
    ||||||||||||| | || |||  |||||| ||| ||| | | ||||| ||||||||||||||||| ||||||| |||| ||||    
T  22698428 tccaacttcgataaggataaaagaacaattcctttgattacagggtcaacctattttgactgcatttaatgatagcctttaaaa 22698511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 242 - 723
Target Start/End: Complemental strand, 18735765 - 18735289
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttc-agaaattt--aatgttat 338  Q
    |||||||| |||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||||| | ||  | ||| ||||||||  |   || |    
T  18735765 gtaaacaatcgctggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtgtctatttatcttctagaaattttgatatttgt 18735666  T
Q  339 tctt-gaagcatcttgataaataaaagaaagtaaaaaa-caatcgaattcaacccagttgaactcaatcgaa-atcggtgtaaataaccataaatgaatt 435  Q
    |||| |||| | |||||||||   ||  ||| |||||| ||||||||||||| |||||||||| |||||||| | |||| |||||||   | ||||||||    
T  18735665 tctttgaagaa-cttgataaaacgaaataagaaaaaaagcaatcgaattcaatccagttgaacccaatcgaagaccggtataaataaaagtgaatgaatt 18735567  T
Q  436 gttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacatt 535  Q
    | |||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||    
T  18735566 gctcaaaagaaacaagtaaattg-------caaagacatttaagaaaatgaacttaaattgcattgattgaatgtagattggtacagatattcatacatt 18735474  T
Q  536 acaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactat 635  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | || |  ||||||||||    
T  18735473 gcaacttgtgactcgtttctttcttccatgcggataatttgagtgtaagt-ttttgtatgattgaattgtgaccctttttt-cttaagagaaactactat 18735376  T
Q  636 ttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttc 723  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||  |||| ||||| ||||||||||||    
T  18735375 ttatacaaatagaaataactgcctagatttg-atttaaaactataactgcagaaaactaactaatcttagccatttgatttgaatttc 18735289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 462 - 655
Target Start/End: Complemental strand, 27818367 - 27818173
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  27818367 attgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttg 27818268  T
Q  562 catgcggata--atttgagtgtaagttttttgtatgattgaattgttacccttttttccct-agggaaaactactatttatacaaatagaaataact 655  Q
    |||  |||||   ||| |||||||||||| ||||| |||| ||||| ||||   ||||||| ||| ||||||||||||||||| ||||||| |||||    
T  27818267 catatggatagtttttaagtgtaagttttgtgtatcattggattgtgaccc--ctttccctaaggaaaaactactatttatactaatagaagtaact 27818173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 462 - 641
Target Start/End: Complemental strand, 15911890 - 15911712
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||| ||||||| |||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||     
T  15911890 attgtaaagacaattaagagaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgtttctctcttg 15911791  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
     ||||||||| |||||||||||||||| ||||||||||  |||| | ||| |||||| || | |||||||||||||||||    
T  15911790 aatgcggatagtttgagtgtaagttttgtgtatgattggtttgtga-cctattttccttatgaaaaactactatttatac 15911712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 41438804 - 41438988
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| ||||| || |||||| |||||| |||| |||||||||| ||||||||||||||||  || ||||    
T  41438804 attgcaaagacatttaaagaaatgtattgaaattgcattgactggatgtaagttggtatacatattcatacattgcaacttgtgactcgttcatcgcttc 41438903  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||| | |||||||||||||||||| ||||    
T  41438904 catacggatattttgagcgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacagatag 41438988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 29708126 - 29708310
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||| ||||||||  ||||| | | |||||| ||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||  || ||||    
T  29708126 attgcaaaaacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcacatattcatacattgcaacttgtgactcgttagtcgcttc 29708225  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| | || |||||||| |||||||||| ||||||||||||||| |||| ||||| |||| | |||||||||||||||||| ||||    
T  29708226 catacagacaatttgagcgtaagtttttagtatgattgaattgtgacccgttttt-cctaagaaaaactactatttatacagatag 29708310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 462 - 644
Target Start/End: Complemental strand, 22064765 - 22064583
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||| |||||||  ||||| | | |||||| ||||| |||||  || ||||| |||| ||||||||||| ||||||||||||||||| || ||||    
T  22064765 attgcaaagtcatttaaagaaatgtattgaaattgcattgactgaataaaagttggtgcacacgttcatacattgcaacttgtgactcgtttgtcgcttc 22064666  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||| |   || ||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||||||||||    
T  22064665 catacggacatcattaagtgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaa 22064583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 458 - 648
Target Start/End: Original strand, 25388937 - 25389127
Alignment:
Q  458 gtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctct 557  Q
    ||||||||||||||  |||||  | ||| | | ||||||||  |||| |||| |||||||| ||||||||||||| || ||||||||||||||||| ||     
T  25388937 gtagattgcaaagatgtttaaagacatgtattgaaattgtaaagatttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcg 25389036  T
Q  558 cttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    ||||||| |||| | | |||||||||||||||  ||||||||||||||| |||  ||||| |||| | ||||||||||||||||||||||||    
T  25389037 cttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgaccaattttt-cctaagaaaaactactatttatacaaataga 25389127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 473 - 618
Target Start/End: Original strand, 22698700 - 22698844
Alignment:
Q  473 atttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataa 572  Q
    ||||||| |||  ||||||||||| |||||||||| |||||||||||  ||| ||||||||||   | |||| |||| ||||||||| | ||||||||||    
T  22698700 atttaaggaaacaaacttaaattgcattgattgaaagtaaattggtatgcatattcatacattttgatttgtaactcatttctctctac-atgcggataa 22698798  T
Q  573 tttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||    
T  22698799 tttgagtgtaagttttctgtatggttgaattgtgacccttttttcc 22698844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 17426107 - 17426240
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  17426107 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccat 17426206  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  17426207 tttt-cctaagaaaaactactatttatacagatag 17426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 506 - 647
Target Start/End: Original strand, 22352016 - 22352157
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| ||||||||  |||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  22352016 aatgaaaattggtggacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 22352115  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||| ||||| |||| | |||||||||||||||||||||||    
T  22352116 tgacccgttttt-cctaagaaaaactactatttatacaaatag 22352157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 15912057 - 15911969
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattt 330  Q
    ||||||||||||| |||||||| || |||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  15912057 gtaaacaaccgctggtttaaaattaattatttgcaagatcatccagtaaatcttaaggacatattgtgcttgttatttttcataaattt 15911969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 20193165 - 20193298
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| |||||| |||||||| |||| |    
T  20193165 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgacccat 20193264  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    ||||  ||| | |||||||||||||||||| ||||    
T  20193265 tttt-tctaagaaaaactactatttatacagatag 20193298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 839 - 914
Target Start/End: Complemental strand, 32116519 - 32116444
Alignment:
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataa 914  Q
    ||||||||||||||||||||| || ||||||||||||| |||||| ||| | ||||||||||||||||||||||||    
T  32116519 gtccaacttcgataggaatgagaaaacaatttcttcgacgataagatcaacttattttgactgcattaaatgataa 32116444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 16667965 - 16668098
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || |||||||  ||| | | |||||||||||||||| ||||||||||||||| |||  |    
T  16667965 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatatggacagtattgagtgtaagtttttagtatgattgaattgtgaccact 16668064  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  16668065 tttt-cctaagaaaaactactatttatacagatag 16668098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 12821225 - 12821367
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || |||||| |||||||||| || ||||||| |||| | | |||| ||||||||||  ||||||||||||||    
T  12821225 aatgaaaattggtgcacatattcatactttgcaacttatgactcgtttgtcgcttccatacggacagtattgattgtaagttttgagtatgattgaattg 12821324  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | | | | |||| |||| | |||||| |||||||||||||||||    
T  12821325 tga-catgtttttcctaagaaaaactgctatttatacaaataga 12821367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 490 - 584
Target Start/End: Original strand, 17637856 - 17637949
Alignment:
Q  490 taaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaag 584  Q
    ||||||| |||||||||||||||||||||||||   ||||||||||   |||||| ||||||||||||| |  ||||||||| ||||||||||||    
T  17637856 taaattgcattgattgaatgtaaattggtacacggattcatacattgtgacttgttactcgtttctctc-tgaatgcggatagtttgagtgtaag 17637949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 493 - 603
Target Start/End: Complemental strand, 18846895 - 18846786
Alignment:
Q  493 attgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgt 592  Q
    |||| |||||||||||||||||| |||||||  ||||||||||   |||||| ||||||||||||| |  || |||||| ||| |||||||||||| |||    
T  18846895 attgcattgattgaatgtaaatttgtacacagattcatacattctgacttgttactcgtttctctc-tagatacggatagtttaagtgtaagttttctgt 18846797  T
Q  593 atgattgaatt 603  Q
    ||| |||||||    
T  18846796 atggttgaatt 18846786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 18847100 - 18847015
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    ||||||||||||| |||||||| || ||  |||||| ||||| |||||||||||  ||| ||||||||||||||||||| ||||||    
T  18847100 gtaaacaaccgctggtttaaaattaattgcttgcaatatcaaccagtaaatctttgggatatattgtgtttgttattttccagaaa 18847015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 17839785 - 17839863
Alignment:
Q  242 gtaaacaaccgctagtttaaaaat-atttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||||| |||| ||||| | ||| |||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  17839785 gtaaacaaccgctggttttaaaattagttacttgcaagatcaaccagtaaatctt-aggacatattgtctttgttatttt 17839863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 27818531 - 27818485
Alignment:
Q  285 cagtaaatcttaaggacatattgtgtttgttatttttcagaaattta 331  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||    
T  27818531 cagtaaatcttagggacatattgtgtttgttatttttcaaaaattta 27818485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 16778087 - 16778017
Alignment:
Q  482 aatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtt 552  Q
    ||||||||||||||| ||  ||||||||||||||||||||||  ||||||||||   |||||| |||||||    
T  16778087 aatgaacttaaattgcataaattgaatgtaaattggtacacaaattcatacattgtgacttgttactcgtt 16778017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 17637623 - 17637707
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    ||||||||||||| ||||||||||| ||  ||| | ||||||  ||||||||||  || |||||||||||||||||||| ||||||    
T  17637623 gtaaacaaccgctggtttaaaaatagttgcttgtatgatcaactagtaaatcttgggg-catattgtgtttgttattttccagaaa 17637707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 573 - 641
Target Start/End: Complemental strand, 16778014 - 16777947
Alignment:
Q  573 tttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    |||||||||||||||| |||||||||||||||| | || ||||| |||| | ||||||| |||||||||    
T  16778014 tttgagtgtaagttttctgtatgattgaattgtgatccgttttt-cctatgaaaaactattatttatac 16777947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 41438584 - 41438640
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaag 298  Q
    |||||||| |||| |||| ||||| |||| |||||||||||| ||||||||||||||    
T  41438584 gtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaag 41438640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 462 - 616
Target Start/End: Original strand, 17839994 - 17840147
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||  ||||||||| |  ||||||||||| |||||||||| ||||||||| ||| |  ||||||||||   |||  | ||||||||||||| |     
T  17839994 attgcaaaggaatttaagaagacaaacttaaattgcattgattgaaagtaaattgggacatagattcatacattgtgactgataactcgtttctctc-ta 17840092  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttaccctttttt 616  Q
     ||| ||||| ||| ||||| | |||| | ||||| || ||||| ||||||||||    
T  17840093 gatgtggatagtttaagtgtgaattttctatatgaatgtattgtgaccctttttt 17840147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 22351743 - 22351820
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| |||| |||| |||||| |||| ||||||||||||  |||||||||||||  ||||||||| || |||||    
T  22351743 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaactagtaaatcttaagagcatattgtgctttttatt 22351820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 439; Significance: 0; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 249 - 929
Target Start/End: Complemental strand, 7808 - 7127
Alignment:
Q  249 accgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattcttgaagca 348  Q
    |||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |    
T  7808 accgctggtttaaaaatatttacttgcaagatcaactagtaaatcttaaggacatattgtgtttgttattttccagaaatttagtgttattcttgaagaa 7709  T
Q  349 tcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaaaagaaac 448  Q
     ||||||||||||| ||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||   ||||||||||| |||||||||||    
T  7708 -cttgataaataaaggaaagtaaaatgcaatcgaattcaacctagttgaacccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaaaagaaac 7610  T
Q  449 aagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgact 548  Q
    |||||||||||| |||| ||||||||||||  |||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  7609 aagtaaattgtaaattgtaaagacatttaattaaatgaactttaattgtattgattgaatgtaagttgatacacatgttcatacattgcaacttgtgact 7510  T
Q  549 cgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||| | ||| ||||||||||||||||    
T  7509 cgtttctctcttccatgcggataatttgagtgtatgttttttgtatgattgaattgtgactcttttttccctagggagagctattatttatacaaataga 7410  T
Q  649 aataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttg-aaaatatccgtt 747  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||  |||    
T  7409 aataactgcctagatttgaatttaaaactataactatagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttgaaaaatatatgtt 7310  T
Q  748 gcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagtccaactt 847  Q
    |||||||||||||| ||  |||||||||| || |||| |||||||||| | |||||||||  |||||||||||||| ||| ||| |||||||||||||||    
T  7309 gcttgaccttatctaaaaccacaacaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatctccagcaagtccaactt 7210  T
Q  848 cgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    |||||||||||| |||||||||| |||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||    
T  7209 cgataggaatgagaagacaattttttcgatgataaggtcaacttattttgactgcattaaatgatagcctttaaaaatattgg 7127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 405; Significance: 0; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 28567460 - 28568142
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||||||| ||||||    
T  28567460 gtaaacaaccgctagtttaaaaatatttacttgcaagatcaa-cagtaaatcttagggacatattgtgtttgttattttccaaaaatttaatgctattct 28567558  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaac-aatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    ||||| || | ||||||||||||||||||||||   ||| ||||||||| ||||||||| ||||||||| |||||||| |||| |||||||||||| |||    
T  28567559 tgaagaatgt-gataaataaaagaaagtaaaaaggtaattgaattcaactcagttgaacccaatcgaaaccggtgtaattaacgataaatgaattgctca 28567657  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    |||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  28567658 aaagaaacaattaagttgtaaattgcaaagacatttaaggaaatgaacttaaattatattgattgaatgtaaattggtacacatgttcatacattgcaac 28567757  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||||||||  | ||||||||||||||| ||    
T  28567758 ttgtgactcatttctctcttccatgcggataatttgagtgtaag-tttttgtatgatagaattgtga-ccttttttcctgaaggaaaactactatttcta 28567855  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  28567856 caaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaa--tgtcttgaaaat 28567953  T
Q  741 atccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagt 840  Q
     |  ||||||||||||||||||||  |||||||||| || |||| |||||||||  | ||||||||   ||||||| |||||| ||  | ||||||||||    
T  28567954 gtttgttgcttgaccttatctgaa-ccacaacaaaactgtccttcgataacttttcgcctgtcgaa-ttaaacacatgctttcgagctttttcagcaagt 28568051  T
Q  841 ccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc--ttaaaaatattgg 929  Q
    | ||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  28568052 ctaacttcgataggaatgagaaaacaatttcttcgatgataaggtcaacctattttgactgcattaaatgataaccttttaaaaatattgg 28568142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 322 - 929
Target Start/End: Complemental strand, 37130720 - 37130111
Alignment:
Q  322 cagaaatttaatgttattcttgaagcatcttgataaataaaagaaagtaaaaaa--caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaa 419  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||  |||| |||||||||  |||||||| |||||||||||||||||||    
T  37130720 cagaaatttaatgttattcttgaagaa-cttgataaagaaaagaaagtaaaaaaagcaattgaattcaacttagttgaacccaatcgaaatcggtgtaaa 37130622  T
Q  420 taaccataaatgaattgttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggta 519  Q
    ||||  ||||||||||| |||||||||||||||||| |||| |||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  37130621 taacggtaaatgaattgctcaaaagaaacaagtaaactgtaaattataaagacatttaaggaaatgaacttaaattgtactgattgaatgtaaattggta 37130522  T
Q  520 cacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccc 619  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||    
T  37130521 cacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgattgtaagttttttgtatgattgaattgcgacccttttt-ccc 37130423  T
Q  620 tagggaaaa-ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttga 718  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  37130422 tagggaaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccatttgatttga 37130323  T
Q  719 atttcgaacgtgtcttgaaaatatccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttct-gtctgtcgaaccgaaacacac 817  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||| || |||| | ||||||| | | |||||||||  |||||||     
T  37130322 atttcgaacgtgtcttgaaaatatccgttgcttgaccttatccgaa-ccacaaccaaattgtccttcggtaactttttcgcctgtcgaactaaaacacat 37130224  T
Q  818 gctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc- 916  Q
    |||||| ||  | ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| ||     
T  37130223 gctttcgagcattttcagcaagtccaacttcgataggaatgagaaaacaatttcttcgatgataaggtcaacctattttgactgcattaaatgatagcct 37130124  T
Q  917 ttaaaaatattgg 929  Q
    |||||||||||||    
T  37130123 ttaaaaatattgg 37130111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 23814732 - 23815413
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattc 340  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||  ||||||||||||||||| ||||||||| |||||||| || ||||||||| |||||     
T  23814732 gtaaacaaccgctggtttaaaaatagttacttgcaagatcaacaagtaaatcttaaggacaaattgtgttttgttattttccaaaaatttaatattatt- 23814830  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    |||||| | ||| |||||||| ||||||||||||||||| |||||||||||| |||||| ||||| ||| ||||||||||||   ||||||||||| |||    
T  23814831 ttgaagaa-cttaataaataagagaaagtaaaaaacaattgaattcaacccacttgaacccaatcaaaaccggtgtaaataaaggtaaatgaattgctca 23814929  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23814930 aaagaaacaagtaaattgtaaactgcaaagacatttaagaaaatgaacttaaagtgtattgattgaatgtaaattggtacacatgttcatacattgcaac 23815029  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaag-ttttttgtatgattgaattgttacccttttttccctagggaaaactactatttat 639  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  23815030 ttgtgactcgtttctctcttccatgcggataattttagtgtaagtttttttgtatgatagaattgtgacccttttttccttagggaaaactactatttat 23815129  T
Q  640 acaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaa 739  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||   ||     
T  23815130 acaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatacttatccattcgatttgaatttcgactttgtctgtgaag 23815229  T
Q  740 tatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaa 838  Q
    |||||||||  ||||||||||        | || |||| || | ||||| |  |||||   ||||||||||| |||| |||||||| |  ||| ||||||    
T  23815230 tatccgttgttttgaccttat--------ataaaaaaactgtcttttgagagttttctacttgtcgaaccgagacacgcgctttcaggcatctccagcaa 23815321  T
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgata-accttaaaaatattgg 929  Q
    |||||||||||||| | |  |||  | |||| ||||||| | ||||||| |||||||||||| |||| |||||||  |||||||||||||||    
T  23815322 gtccaacttcgataaggaaaaaagaataattccttcgattacaaggtcaacctattttgactacatttaatgatagcccttaaaaatattgg 23815413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 242 - 918
Target Start/End: Original strand, 21256224 - 21256882
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttc-agaaatttaatgttatt 339  Q
    ||||||||||||| |||| ||||||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||| | |||||||||||| ||    
T  21256224 gtaaacaaccgctggttttaaaaatatttacttgcaagatcaaccagtaaatcttaggaacatattgtgtttgttatttttccataaatttaatgttgtt 21256323  T
Q  340 cttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttc 439  Q
    ||||||| | || ||||||    |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||   ||||||||||| ||    
T  21256324 cttgaagaa-ctcgataaa----agaaagtaaaaagcaatcgaattcaacccagttgaattcaattgaaatcggtgtaaacaaaggtaaatgaattgctc 21256418  T
Q  440 aaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaa 539  Q
    |||||||||||||||||||||       ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||        
T  21256419 aaaagaaacaagtaaattgta-------aagacatttaagaaaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacatt---- 21256507  T
Q  540 cttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttat 639  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| || ||||||||||||||||||||    
T  21256508 ---gtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccactttt-ccttagggaaaactactatttat 21256603  T
Q  640 acaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaa 739  Q
    |||||||||||||||| |||| |||| ||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  21256604 acaaatagaaataactacctatatttaaatttaaaactataactgtggtaaactaacaatacttatccattcgatttgaattttgaatgtgtcttgaaaa 21256703  T
Q  740 tatccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttct-gtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaa 838  Q
    ||| |||||||||||||||||  ||  |||||||||| ||||||| ||||||||| | | |||||||||  |||||| ||||||| ||  | ||||||||    
T  21256704 tattcgttgcttgaccttatc-caaaccacaacaaaactgcccttcgataactttttcgcctgtcgaactaaaacacgcgctttcgagcattttcagcaa 21256802  T
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacctt 918  Q
    ||||||||| ||||  || || || ||||||| |||||||| ||| |||  |||||||||||||||||||||||| ||||    
T  21256803 gtccaactttgatataaaagagaaaacaatttattcgatgacaagatcaatctattttgactgcattaaatgatagcctt 21256882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 242 - 913
Target Start/End: Original strand, 34827376 - 34828025
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||| ||||||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| || ||||    
T  34827376 gtaaacaaccgctggtttaaaaatatttacttgtaagatcaaccagtaaatcttaaggaaatattgtgtttgttattttccagaaatttaatattgttct 34827475  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaa 441  Q
    ||||| | |||||||||    |||||||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||   ||||||||||| ||||    
T  34827476 tgaagaa-cttgataaa----agaaagtaaaaagcaatcgaattcaacccacttgaatccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaa 34827570  T
Q  442 aagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaact 541  Q
    |||||||||||||| ||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34827571 aagaaacaagtaaactgta-------aagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattacaact 34827663  T
Q  542 tgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggg-aaaactactatttata 640  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  34827664 tgtgactcgtttctctcttccatgcagataatttgagtgtaagttttttgtatgattgaattgtgacccttttt--cctagggaaaaactactatttata 34827761  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
     |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| || | |||||| |    
T  34827762 taaatagaaataactacctagatttgaatttaaaactataactgcggtaaactaacaatacttatccattcgatttgaatttcgaatgtattttgaaagt 34827861  T
Q  741 atccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaag 839  Q
    ||| ||||  |||||||||||        ||| |||| ||||||| ||  | ||||  ||||||||||||| |||| ||| ||||||| ||  || |||     
T  34827862 atctgttgttttgaccttatc--------caa-aaaactgcccttcga-gagtttccatctgtcgaaccgagacacgcgccttcaagtatccccaacaaa 34827951  T
Q  840 tccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgata 913  Q
    ||||||||||||| | || |||  ||||||  |||||| | ||||||| ||||||||||||||||| |||||||    
T  34827952 tccaacttcgataaggataaaagaacaattcattcgattacaaggtcaacctattttgactgcatttaatgata 34828025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 23803111 - 23803786
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattc 340  Q
    |||||||| |||| ||||||||||| ||| ||| |||||||  |||||||||| ||||||||||||||||| |||||||| |||||||||||| |||||     
T  23803111 gtaaacaatcgctggtttaaaaatagttacttgtaagatcatccagtaaatctgaaggacatattgtgttttgttattttccagaaatttaatattatt- 23803209  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    |||||| | ||||||||||| ||||||||||||| ||||||||||||||||| |||||          | ||||||||||||   ||||||||||| |||    
T  23803210 ttgaagaa-cttgataaatagaagaaagtaaaaagcaatcgaattcaacccaattgaa----------accggtgtaaataaaggtaaatgaattgctca 23803298  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaat-tgtattgattgaatgtaaattggtacacatgttcatacattacaa 539  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||    
T  23803299 aaagaaacaagtaaattgtagattgtaaagatatttaagaaaatgaacttaaaagtgtattgattgaatgtaaattggtacacatgttcatacattgcaa 23803398  T
Q  540 cttgtgactcgtttctctcttccatgcggataatttgagtgtaag-ttttttgtatgattgaattgttacccttttt--tccctagggaaaactactatt 636  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||  |   |||| ||||||||||||    
T  23803399 cttgttactcgtttctctcttccatgcggataatttgagtgcaagtttttttgtatgatagaattgtgacccttttttatttataggaaaaactactatt 23803498  T
Q  637 tatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttga 736  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||     
T  23803499 tatacaaatagaaataactacctagatttgaatttaaaactataactgcagtaaactaactatacttatccactcgatttgaatttcgaatgagtcttgg 23803598  T
Q  737 aaatatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcag 835  Q
    || |||||||||  ||||||||||        | || |||| || | || || |  |||||   ||| ||||||| |||| | ||||||    ||| |||    
T  23803599 aagtatccgttgttttgaccttat--------aaaaaaaaactgtctttcgagagttttctacttgttgaaccgagacacgcactttcagccatctccag 23803690  T
Q  836 caagtccaacttcgataggaatgaaaag-acaatttcttcgatgataaggtcagcctattttgactgcattaaatgata-accttaaaaatattgg 929  Q
    |||||||||||||||||   || ||||| |||||| ||||||| | ||||||| ||||||||||||||||| |||||||  |||||||||||||||    
T  23803691 caagtccaacttcgataacgataaaaagtacaattccttcgattacaaggtcaacctattttgactgcatttaatgatagcccttaaaaatattgg 23803786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 517 - 929
Target Start/End: Original strand, 23870534 - 23870944
Alignment:
Q  517 gtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacc-cttttt 615  Q
    ||||||||||||||||||| |||||||||||||||||||||||  | |||  ||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  23870534 gtacacatgttcatacattgcaacttgtgactcgtttctctctctcgtgcaaataatttgagtgtaagttttttgtatgattgaattgtgaccacttttt 23870633  T
Q  616 tccctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatt 715  Q
    |   |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||    
T  23870634 tt--taggaaaaactactatttatacaaatagaaataactacctagatttgaatttaaaactataacggcagtaaactaacaatacttattcattcgatt 23870731  T
Q  716 tgaatttcgaacgtgtcttgaaaatatccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacac 815  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||| |||  |||||||||| ||||||| |||||||||| | | |||||||  ||||||    
T  23870732 tgaatttcgaaagtgtcttg-aaatatctgttgcttgaccttatccgaa-ccacaacaaaactgcccttcgataactttccgcccgtcgaactaaaacac 23870829  T
Q  816 acgctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataac 915  Q
    |||||||| ||  | ||||||||||||||||||||| |||  || || |||||||||||||||| ||||||| |||||||||||||||||| || ||| |    
T  23870830 acgctttcgagcattttcagcaagtccaacttcgatcggagagagaaaacaatttcttcgatgagaaggtcaacctattttgactgcattatattatagc 23870929  T
Q  916 c-ttaaaaatattgg 929  Q
    | |||||||||||||    
T  23870930 ctttaaaaatattgg 23870944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 272 - 575
Target Start/End: Original strand, 23829610 - 23829912
Alignment:
Q  272 ttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattcttgaagcatcttgataaataaaagaaagta 370  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| || ||||| |||||| | ||||||||||| ||||||||     
T  23829610 ttgcaagatcaaccagtaaatcttaaggacatattgtgttttgttattttccagaaattttattttatt-ttgaagaa-cttgataaatagaagaaagtt 23829707  T
Q  371 aaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagattgcaaag 470  Q
    |||| ||||||||||||||| |||||||| ||||||||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||| |||||||    
T  23829708 aaaagcaatcgaattcaacctagttgaacccaatcgaaaccggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgtagactgcaaag 23829807  T
Q  471 acatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggat 570  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23829808 acatttaagaaaatgaacttaaagtgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggat 23829907  T
Q  571 aattt 575  Q
    |||||    
T  23829908 aattt 23829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 517 - 929
Target Start/End: Complemental strand, 22708291 - 22707880
Alignment:
Q  517 gtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttaccctttttt 616  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||  ||||     
T  22708291 gtacacatgttcatacattgcaatttgtgattcgtttctctcttgcatgcggataatttaagtgtaagttttttgtataattgaattgtgaccactttt- 22708193  T
Q  617 ccctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgattt 716  Q
    ||  ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| |||  |||||||||||||||||||    
T  22708192 cctgaggaaaaactactatttatagaaatagaaataactacctagatttgaatttaaaactataactgcagtaaattaataatacttatccattcgattt 22708093  T
Q  717 gaatttcgaacgtgtcttgaaaatatccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataac-tttctgtctgtcgaaccgaaacac 815  Q
    |||||||||| |||||||| ||||||| |||||||||||||||| |||  |||||||||| || |||| |||||| ||| || | |||||||  ||||||    
T  22708092 gaatttcgaatgtgtcttg-aaatatctgttgcttgaccttatccgaa-ccacaacaaaactgtccttggataacttttttgcccgtcgaactaaaacac 22707995  T
Q  816 acgctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataac 915  Q
    |||||||| ||  | ||||||||||||||||||||| |||  || || |||||||||||||||| ||||||| ||||||||||||||||||||| ||| |    
T  22707994 acgctttcgagcattttcagcaagtccaacttcgatcggagagagaaaacaatttcttcgatgacaaggtcaacctattttgactgcattaaattatagc 22707895  T
Q  916 c-ttaaaaatattgg 929  Q
    | |||||||||||||    
T  22707894 ctttaaaaatattgg 22707880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 395 - 665
Target Start/End: Complemental strand, 22593978 - 22593716
Alignment:
Q  395 tgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaat 494  Q
    |||| ||||||||||| |||||||||||   |||| |||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  22593978 tgaattcaatcgaaattggtgtaaataaaggtaaacgaattgctcaaaagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaat 22593886  T
Q  495 tgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtat 594  Q
    || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22593885 tgcattgattgaatataaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcgcataatttgagtgtaagttttttgtat 22593786  T
Q  595 gattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctagattt 665  Q
    ||||||||||| |||| |||| || |||  |||||||||||||||||||||| |||||||| |||||||||    
T  22593785 gattgaattgtgaccc-ttttcccttagaaaaaactactatttatacaaatataaataactacctagattt 22593716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 462 - 660
Target Start/End: Original strand, 10480359 - 10480557
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||     
T  10480359 attgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgcgacttgtttctctcttg 10480458  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgccta 660  Q
     ||||||||| || ||||||||||||| |||||||||| ||||| ||||||||  ||  ||| ||||||||||||||||| ||||||||||||| ||||    
T  10480459 aatgcggatagttcgagtgtaagttttgtgtatgattggattgtgacccttttcccctaaggaaaaactactatttatactaatagaaataactaccta 10480557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 376 - 726
Target Start/End: Original strand, 16664559 - 16664903
Alignment:
Q  376 caatcgaattcaacccagttgaactcaatcgaaat-cggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagattgcaaagacat 474  Q
    |||||||||||||||||||||||  |||||||| | || ||  |||||   ||||||||||  |||||| ||||||||||||||       |||||||||    
T  16664559 caatcgaattcaacccagttgaatccaatcgaagtacgatgcgaataaaagtaaatgaattactcaaaataaacaagtaaattg-------caaagacat 16664651  T
Q  475 ttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatt 574  Q
    ||||  |||||||||||||||| ||||| ||||||||  |||||||| |  |||||||||| ||||||||||||||||| || ||||||| |||||| ||    
T  16664652 ttaaagaaatgaacttaaattgcattgactgaatgtaggttggtacatagattcatacattgcaacttgtgactcgtttatcgcttccatacggatagtt 16664751  T
Q  575 tgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga-aataactgcctagatttgaatttaa 673  Q
    |||| |||||||||| ||||||||||||||| ||||||||||  ||| | ||||||||||||||||||||||||  |||||| ||||| ||  | |||||    
T  16664752 tgagcgtaagtttttagtatgattgaattgtgaccctttttt-tctaagaaaaactactatttatacaaatagaggataactacctagtttaaattttaa 16664850  T
Q  674 aactataattgcagtaaactaactatacttatccattcgatttgaatttcgaa 726  Q
    |||||||| || || |||||| |||  |||| |||| |||||||||| |||||    
T  16664851 aactataactgtagaaaactacctaatcttagccatacgatttgaatatcgaa 16664903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 462 - 726
Target Start/End: Complemental strand, 22881121 - 22880858
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | |||||||  ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||| || |||     
T  22881121 attgcaaagacatttaaagaaatgcatttaaatttcattgagtgaatgtaacttggtacacatattcatacattgcaacttgtgactcgtttatcgcttt 22881022  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga-aataactgccta 660  Q
    ||| |||||| ||||||  || |||||| ||||||||||||||| || ||||||| |||| | ||||||||||||||||||||||||  |||||| ||||    
T  22881021 catacggatagtttgagcatatgtttttagtatgattgaattgtgacactttttt-cctaagaaaaactactatttatacaaatagaggataactaccta 22880923  T
Q  661 gatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaa 726  Q
    | ||||||||||||||||||| ||||| |||||| |||  |||| |||| |||||| ||| |||||    
T  22880922 g-tttgaatttaaaactataactgcagaaaactacctaatcttagccatacgatttaaatatcgaa 22880858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 462 - 641
Target Start/End: Original strand, 21904931 - 21905109
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||| |||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||     
T  21904931 attgcaaagacaattaagagaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgttcctctcttg 21905030  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
     ||| ||||| |||||||||||||||||||||||||||  |||| | ||| ||||||||| | ||||||| |||||||||    
T  21905031 aatgtggatagtttgagtgtaagttttttgtatgattggtttgtga-cctgttttccctatgaaaaactattatttatac 21905109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 462 - 598
Target Start/End: Original strand, 23769342 - 23769478
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||| |||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||     
T  23769342 attgcaaagacaattaagagaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgtttctctcttg 23769441  T
Q  562 catgcggataatttgagtgtaagttttttgtatgatt 598  Q
     ||||||||||||||||||||| |||| |||||||||    
T  23769442 aatgcggataatttgagtgtaaattttgtgtatgatt 23769478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 475 - 723
Target Start/End: Original strand, 25349247 - 25349497
Alignment:
Q  475 ttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatt 574  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| |||||| ||||||||| |||||||  ||||||||| ||    
T  25349247 ttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatatccatacattgcaacttatgactcgttcctctcttgaatgcggatagtt 25349346  T
Q  575 tgagtgtaagttttttgtatgattgaattgttacccttttttccctagg---gaaaactactatttatacaaatagaaataactgcctagatttgaattt 671  Q
    |||||||||||||| |||||||||  ||||| ||||  ||||||||| |    ||||||||||||||||| ||||||| || || |||| |||   ||||    
T  25349347 tgagtgtaagttttgtgtatgatttgattgtgaccc-gttttccctaagaaaaaaaactactatttatactaatagaagtagctacctacattaagattt 25349445  T
Q  672 aaaactataattgcagtaaactaactatacttatccattcgatttgaatttc 723  Q
     |||||| || |||  ||||| ||| | |  ||||| |||||||||||||||    
T  25349446 gaaactacaactgctataaacgaacaacatatatccgttcgatttgaatttc 25349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 462 - 647
Target Start/End: Complemental strand, 31818092 - 31817908
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||| ||||||||  ||||||| | |||||| ||||| ||||||||| ||||||| ||| |||||| ||| ||||||||||||||||| || ||||    
T  31818092 attgcaaaaacatttaaagaaatgaattgaaattgcattgactgaatgtaagttggtactcatattcatatattgcaacttgtgactcgtttatcgcttc 31817993  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||||| |||||| |||| ||||| ||| ||||||||||| |||| ||||| | || | |||||||||||||||||| ||||    
T  31817992 catacggatagtttgagcgtaaatttttagtacgattgaattgtgacccgttttt-cataagaaaaactactatttatacagatag 31817908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 462 - 644
Target Start/End: Original strand, 39227409 - 39227591
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||| |||||  ||||| | | |||||| ||||| |||||  || ||||| |||||||||||||||| |||||||||| |||||| ||  |||    
T  39227409 attgcaaagacgtttaaagaaatgtattgaaattgcattgactgaataaaagttggtgcacatgttcatacattgcaacttgtgattcgtttgtcgattc 39227508  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||| | | |||||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||||||||||    
T  39227509 catacggacagtattgagtgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaa 39227591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 502 - 605
Target Start/End: Complemental strand, 20524274 - 20524171
Alignment:
Q  502 attgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaa 601  Q
    |||||||||||||||||||| |  |||||||||| ||||||||||||||||| ||||||  ||||||||| |||||||||||||||| ||||||||||||    
T  20524274 attgaatgtaaattggtacaaaaattcatacattgcaacttgtgactcgtttttctcttaaatgcggatagtttgagtgtaagttttctgtatgattgaa 20524175  T
Q  602 ttgt 605  Q
    ||||    
T  20524174 ttgt 20524171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 24896767 - 24896625
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||||||||||| || |||||||||||| |||| || ||||||| || | | | |||||||||||||||  ||||||||||||||    
T  24896767 aatgaaaattggtgcacatgttcatactttgcaacttgtgactagtttgtcgcttccatacgaacagtattgagtgtaagttttgagtatgattgaattg 24896668  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||||||||||||||||||||||    
T  24896667 tgacccgttttt-cctaagaaaaactactatttatacaaataga 24896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 514 - 642
Target Start/End: Complemental strand, 22648699 - 22648571
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| | |||     
T  22648699 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtga-cctg 22648601  T
Q  613 ttttccctagggaaaactactatttataca 642  Q
    |||| |||| | ||||||||||||||||||    
T  22648600 tttttcctaagaaaaactactatttataca 22648571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 462 - 618
Target Start/End: Original strand, 30089876 - 30090032
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttca-tacattacaacttgtgactcgtttctctctt 560  Q
    |||||||||  ||||||  |||| ||| ||||||| || || ||||||||||||||||||||| |||| ||||||   |||||| |||| |||||||||     
T  30089876 attgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgacttgttactcatttctctctg 30089975  T
Q  561 ccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
      ||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||    
T  30089976 a-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcc 30090032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 462 - 618
Target Start/End: Original strand, 30126481 - 30126637
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttca-tacattacaacttgtgactcgtttctctctt 560  Q
    |||||||||  ||||||  |||| ||| ||||||| || || ||||||||||||||||||||| |||| ||||||   |||||| |||| |||||||||     
T  30126481 attgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgacttgttactcatttctctctg 30126580  T
Q  561 ccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
      ||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||    
T  30126581 a-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcc 30126637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 490 - 641
Target Start/End: Original strand, 30051889 - 30052039
Alignment:
Q  490 taaattgtattgattgaatgtaaattggtacacatgttca-tacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagtttt 588  Q
    ||||||| || || ||||||||||||||||||||  |||| ||||||   |||||| ||||||||||||||   ||||||||| ||||||||||||||||    
T  30051889 taaattgcatagactgaatgtaaattggtacacagattcaatacattgtgacttgttactcgtttctctctga-atgcggatagtttgagtgtaagtttt 30051987  T
Q  589 ttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
     |||||||||||||||| |||| ||||| |||| | ||| |||||||||||||    
T  30051988 ctgtatgattgaattgtgacccattttt-cctatgaaaagctactatttatac 30052039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 490 - 641
Target Start/End: Original strand, 30142933 - 30143083
Alignment:
Q  490 taaattgtattgattgaatgtaaattggtacacatgttca-tacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagtttt 588  Q
    ||||||| || || ||||||||||||||||||||  |||| ||||||   |||||| ||||||||||||||   ||||||||| ||||||||||||||||    
T  30142933 taaattgcatagactgaatgtaaattggtacacagattcaatacattgtgacttgttactcgtttctctctga-atgcggatagtttgagtgtaagtttt 30143031  T
Q  589 ttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
     |||||||||||||||| |||| ||||| |||| | ||| |||||||||||||    
T  30143032 ctgtatgattgaattgtgacccattttt-cctatgaaaagctactatttatac 30143083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 517 - 642
Target Start/End: Original strand, 23190265 - 23190390
Alignment:
Q  517 gtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttt 615  Q
    |||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||| ||||||||||| |||| ||||    
T  23190265 gtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgtttt 23190364  T
Q  616 tccctagggaaaactactatttataca 642  Q
    | |||| | ||||||||||||||||||    
T  23190365 t-cctaagaaaaactactatttataca 23190390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 517 - 642
Target Start/End: Original strand, 23611520 - 23611645
Alignment:
Q  517 gtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttt 615  Q
    |||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||| ||||||||||| |||| ||||    
T  23611520 gtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgtttt 23611619  T
Q  616 tccctagggaaaactactatttataca 642  Q
    | |||| | ||||||||||||||||||    
T  23611620 t-cctaagaaaaactactatttataca 23611645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 514 - 642
Target Start/End: Original strand, 23203878 - 23204006
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||| ||| || ||||||| |||| | | |||||||||||||||| ||| ||||||||||| |||| |    
T  23203878 ttggtacacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgt 23203977  T
Q  613 ttttccctagggaaaactactatttataca 642  Q
    |||| |||| | ||||||||||||||||||    
T  23203978 tttt-cctaagaaaaactactatttataca 23204006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 514 - 642
Target Start/End: Original strand, 23615122 - 23615250
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| | || | | |||||||||||||||| ||||||||||||||| | |||     
T  23615122 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacagacagtattgagtgtaagtttttagtatgattgaattgtga-ccta 23615220  T
Q  613 ttttccctagggaaaactactatttataca 642  Q
    |||| |||| | ||||||||||||||||||    
T  23615221 tttttcctaagaaaaactactatttataca 23615250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 10479936 - 10480027
Alignment:
Q  242 gtaaacaaccgctagtttaaaaat-atttatttgcaagatcaatcagtaaatcttaaggacatattgtg-tttgttatttttcagaaattta 331  Q
    |||||||||||||||||||||||| | ||| ||||||||||||  |||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  10479936 gtaaacaaccgctagtttaaaaattaattacttgcaagatcaactagtaaatcttaaggacatattgtgtttttttattttccagaaattta 10480027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 22594057 - 22593980
Alignment:
Q  256 gtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaat 333  Q
    ||||||||||| ||| |||||||||||| || ||||||||||| |||||||||||||||||||||  |||||||||||    
T  22594057 gtttaaaaatagttacttgcaagatcaaccaataaatcttaagaacatattgtgtttgttattttctagaaatttaat 22593980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 481 - 605
Target Start/End: Complemental strand, 20442371 - 20442248
Alignment:
Q  481 aaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtg 580  Q
    |||| ||| ||||||| |||||| ||||||||||||||||| |  ||||||||||   |||||| |||||||| |||||   ||||||||| ||||| ||    
T  20442371 aaataaacgtaaattgcattgatcgaatgtaaattggtacagagattcatacattgtgacttgttactcgtttatctctga-atgcggatagtttgattg 20442273  T
Q  581 taagttttttgtatgattgaattgt 605  Q
    |||||||| ||||||||||||||||    
T  20442272 taagttttctgtatgattgaattgt 20442248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 20442599 - 20442521
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||||| ||||||||||| ||| ||||||||| || |||||||||||  ||||||||||||||| |||||||    
T  20442599 gtaaacaaccgctggtttaaaaatagttacttgcaagattaaccagtaaatctttgggacatattgtgtttattatttt 20442521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 507 - 605
Target Start/End: Original strand, 23995665 - 23995762
Alignment:
Q  507 atgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgt 605  Q
    |||||||||||||||||  ||||||||||   |||||| ||||||||||||||   |||| |||| |||||||||||||||| ||||||||||||||||    
T  23995665 atgtaaattggtacacagattcatacattgtgacttgttactcgtttctctctaa-atgcagatagtttgagtgtaagttttctgtatgattgaattgt 23995762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 25349023 - 25349101
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||||| |||||||| || ||| |||| |||| || |||||||||||| |||||||||||||||||||||||    
T  25349023 gtaaacaaccgctggtttaaaattagttacttgctagattaaccagtaaatcttagggacatattgtgtttgttatttt 25349101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 526 - 642
Target Start/End: Complemental strand, 22633938 - 22633822
Alignment:
Q  526 ttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggg 624  Q
    ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| | ||| |||| || | |     
T  22633938 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtga-cctgtttttccaaaga 22633840  T
Q  625 aaaactactatttataca 642  Q
    ||||||||||||||||||    
T  22633839 aaaactactatttataca 22633822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 574 - 647
Target Start/End: Complemental strand, 24967594 - 24967522
Alignment:
Q  574 ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||| | |||||||||||||||||| ||||    
T  24967594 ttgagtgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacagatag 24967522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 473 - 605
Target Start/End: Original strand, 20281119 - 20281250
Alignment:
Q  473 atttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataa 572  Q
    |||||| ||||| ||| ||||||| || ||| |||||||||||||||||||   |||||||||   |||||| ||||||||||||| |  |||||||||     
T  20281119 atttaaaaaaataaacgtaaattgcatagatcgaatgtaaattggtacacagaatcatacattctgacttgttactcgtttctctc-tgaatgcggatag 20281217  T
Q  573 tttgagtgtaagttttttgtatgattgaattgt 605  Q
    | ||||||||| |||| ||||||| ||||||||    
T  20281218 tatgagtgtaaattttctgtatgactgaattgt 20281250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 23769150 - 23769222
Alignment:
Q  256 gtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattta 331  Q
    |||||||| || ||| |||||||||||| |||||||||||||   |||||||||||||||||||| ||||||||||    
T  23769150 gtttaaaattaattacttgcaagatcaaccagtaaatcttaa---catattgtgtttgttattttccagaaattta 23769222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 20280914 - 20280978
Alignment:
Q  256 gtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||| ||| ||||||||| || |||||||||||  |||||||||||||||||||||||    
T  20280914 gtttaaaaataattacttgcaagattaaccagtaaatctttgggacatattgtgtttgttatttt 20280978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 21904751 - 21904799
Alignment:
Q  272 ttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||    
T  21904751 ttgcaagatcaattaatgaatcttaaggacatattgtgtttgttatttt 21904799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 934 - 977
Target Start/End: Complemental strand, 19952506 - 19952463
Alignment:
Q  934 acacgcgcacaacagaaacacattcttcttcttcagctctctgc 977  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  19952506 acacgcgcacaacagaaacacgttcttcttcttcaactctctgc 19952463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30126306 - 30126353
Alignment:
Q  273 tgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  30126306 tgcaagatcaaccagtaaatctttaggacatactgtgtttgttatttt 30126353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 31818315 - 31818248
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||||| | || |||| |||||||||| |||||||||||| ||||||||||||||  |||||||||    
T  31818315 gtaaacaatctctggtttcaaaatatttacttgcaagatcaaccagtaaatcttaagagcatattgtg 31818248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 474 - 618
Target Start/End: Original strand, 25966158 - 25966301
Alignment:
Q  474 tttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat 573  Q
    ||||||||||  |||||||||||  ||||||||| |||||||| |||||   ||||||||||   |||| | ||||||||||||| |  ||| ||||| |    
T  25966158 tttaagaaaacaaacttaaattgcgttgattgaaagtaaattgatacacggattcatacattgtgacttttaactcgtttctctc-taaatgtggatagt 25966256  T
Q  574 ttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
    ||||| |||| |||| |||||  ||||||| | |||| |||||||    
T  25966257 ttgagcgtaaattttctgtattgttgaattctgacccctttttcc 25966301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 39227188 - 39227256
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||||| |||| |||| |||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  39227188 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 39227256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30051687 - 30051733
Alignment:
Q  273 tgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  30051687 tgcaagatcaaccagtaaatctt-aggacatactgtgtttgttatttt 30051733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30089702 - 30089748
Alignment:
Q  273 tgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  30089702 tgcaagatcaaccagtaaatctt-aggacatactgtgtttgttatttt 30089748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30142731 - 30142777
Alignment:
Q  273 tgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  30142731 tgcaagatcaaccagtaaatctt-aggacatactgtgtttgttatttt 30142777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30243901 - 30243947
Alignment:
Q  273 tgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  30243901 tgcaagatcaaccagtaaatctt-aggacatactgtgtttgttatttt 30243947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 24897033 - 24896956
Alignment:
Q  242 gtaaacaaccgctagtttaaaa-atatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| ||||||||| ||| || || | |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  24897033 gtaaacaatcgctagtttcaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 24896956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 370; Significance: 0; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 4229593 - 4230285
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatat-tgtgtttgttatttttcagaaatttaatgttattc 340  Q
    ||||||||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||| ||||||| || |||||||||||||||||||    
T  4229593 gtaaacaaccgctggtttaaacatagttacttgcaagatcaaccagtaaatcttaaggacatatctgtgcttgttatcttccagaaatttaatgttattc 4229692  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaa---caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgt 437  Q
    |||||| || ||||||||||||| ||||||| |||   ||||||||||||||||| |||||| |||||||||| |||||||||| |  ||||| |||||     
T  4229693 ttgaagaat-ttgataaataaaataaagtaagaaaaagcaatcgaattcaacccacttgaacccaatcgaaattggtgtaaatagctgtaaataaattgc 4229791  T
Q  438 tcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattac 537  Q
    ||||||||||||||| ||||||| |||| ||||||| ||||  |||||||||| |||||| |||||||||||||| ||||||||||| |||||||||| |    
T  4229792 tcaaaagaaacaagtgaattgtaaattgtaaagacacttaaagaaatgaacttgaattgtgttgattgaatgtaagttggtacacatattcatacattgc 4229891  T
Q  538 aacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactattt 637  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||| ||||||| |||||||| | ||||||||||||||||||||    
T  4229892 aacttgtgactcgtttatctcttccatgcggatagtttgagcgtaagttatttgtatgatagaattgtgacccttttct-cctagggaaaactactattt 4229990  T
Q  638 atacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaa 737  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  4229991 atacaaatagaaataactgcctagatttgaatctaaaactataactgcagtaaactaacgaaacttatccattcgatttgaatttcgaatgtgtcttgaa 4230090  T
Q  738 aatatccgttgcttgaccttatctgaattcacaacaa-aaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagt-gtcttcag 835  Q
    ||||||| ||| ||||||||||||||| |||| |||| || || |||| ||||| |||| | |||||||||  | |||||||||||  |||  | |||||    
T  4230091 aatatccattgtttgaccttatctgaa-tcaccacaagaattgtccttcgataaatttccgcctgtcgaactaacacacacgcttttgagtatttttcag 4230189  T
Q  836 caagtccaacttcgatagg-aatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  4230190 caagtccaacttcgataggaaatgagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattgg 4230285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 4361383 - 4362061
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatattt-atttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattc 340  Q
    |||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  4361383 gtaaacaaccgctaatttaaaaatattttacttgcaagatcaa-cagtaaatcttaaggacatattgtgtttgttatttctcagaaatttaatgttattg 4361481  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    |||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||| |||    
T  4361482 ttgaagaa-cttgataaataaaagaaagtaaaaagcaatcgaattcaacccagttgaactcaatcgaaattggtgtaaataaaggtaaatgaattgctca 4361580  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaa----attgtattgattgaatgtaaattggtacacatgttcatacatta 536  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||    |||| |||||||||||||||||||||||||||||||||| |||     
T  4361581 aaagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaattaaattgcattgattgaatgtaaattggtacacatgttcatatattg 4361673  T
Q  537 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggg-aaaactactat 635  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||| |||||||||||    
T  4361674 caacttgttactcgtttctctcttccatgcggataatttgagtataagttttttgtatgattgaattgtga-ccttttttcgctagggaaaaactactat 4361772  T
Q  636 ttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttg 735  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||    
T  4361773 ttatacaaatagaaataactacatagatttcaatttaaaactataactgcagtaaactaacaatacttatccattcgatttgaatttcgaatgtatcttg 4361872  T
Q  736 aaaatatccgttg--cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttc 833  Q
     || |||| ||||   |||||||||||      || || |||| ||| ||| ||  | ||||  ||||||||||||| |||| ||| |||| || ||| |    
T  4361873 gaagtatctgttggttttgaccttatc------ca-aaaaaaattgctcttcga-gagtttccatctgtcgaaccgagacacgcgccttcaggtatctcc 4361964  T
Q  834 agcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgata-accttaaaaatattgg 929  Q
    |  |||||||||||||||| | || |||  ||||||  |||||| | ||||||| |||| ||||| |||||| |||||||  |||||||||||||||    
T  4361965 aataagtccaacttcgataaggataaaagaacaattctttcgattacaaggtcaacctactttgagtgcatttaatgatagcccttaaaaatattgg 4362061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 242 - 852
Target Start/End: Original strand, 2603232 - 2603828
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgtt-atttttcagaaatttaatgttattc 340  Q
    |||||||||  || ||||||| ||||||| |||||||||||| |||||||||||||| | ||||||||||| || ||||| |||||||||||| || |||    
T  2603232 gtaaacaacgactggtttaaacatatttacttgcaagatcaaccagtaaatcttaagaaaatattgtgtttttttattttccagaaatttaatattgttc 2603331  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    |||||| | |||||||||    ||||||||||||  ||| |||||||||| |||||||| ||||| ||||| ||||||||||   ||||||||||  |||    
T  2603332 ttgaagaa-cttgataaa----agaaagtaaaaagtaatagaattcaaccaagttgaacccaatctaaatcagtgtaaataaaggtaaatgaattactca 2603426  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  2603427 aaagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtatacatgttcatacattgcaac 2603519  T
Q  541 ttgtga-ctcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaa-------actac 632  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||  ||||       |||||    
T  2603520 ttgtgatctcgtttctctcttccatgcggataatttgagtttaag-tttttgtatgattgaattgtaaccc-tttttccctacagaaaaactactactac 2603617  T
Q  633 tatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtc 732  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| || ||    
T  2603618 tatttatacaaatagaaataactacctagatttgaatttaaaactataactgcagtaaactaacaatacttatccattctatttgaatttcgaatgtatc 2603717  T
Q  733 ttgaaaatatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtct 831  Q
    ||| || ||| |||||  |||||||||||        ||| |||| ||||||| ||  | ||||  ||||||||||||| |||| ||| ||||||| |||    
T  2603718 ttggaagtattcgttgttttgaccttatc--------caa-aaaactgcccttcga-gagtttccatctgtcgaaccgagacacgcgccttcaagtatct 2603807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 242 - 726
Target Start/End: Original strand, 21168085 - 21168563
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttg-ttatttttcagaaattt--aatgttat 338  Q
    |||||||| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||  |||| ||  ||||||||  |   || |    
T  21168085 gtaaacaatcgctggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttaattatcttctagaaatttggatatttgt 21168184  T
Q  339 tcttgaagcatcttgataaataaaagaaagtaaaaaa-caatcgaattcaacccagttgaactcaatcgaa-atcggtgtaaataaccataaatgaattg 436  Q
    |||||||| | |||||||||   ||  ||| |||||| |||||||||||||||||||||||  |||||||| | |||| |||||||   | |||||||||    
T  21168185 tcttgaagaa-cttgataaaacgaaataagaaaaaaagcaatcgaattcaacccagttgaatccaatcgaagaccggtataaataaaagtgaatgaattg 21168283  T
Q  437 ttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacatta 536  Q
     |||||||||||||||||||||       ||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||     
T  21168284 ctcaaaagaaacaagtaaattg-------caaagacatgtaagaaaatgaacttaaattgcattgattgaatgtagattgctacacatattcatacattg 21168376  T
Q  537 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatt 636  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||  || | ||||||||||||    
T  21168377 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaag-tttttgtatgattgaattgtgaccc-tttttcgttaagaaaaactactatt 21168474  T
Q  637 tatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaa 726  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||  |||| ||||| |||||||||||||||    
T  21168475 tatacaaatagaaataactgcctagatttg-gtttaaaattataattgcagaaaactaactaatcttagccatttgatttgaatttcgaa 21168563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 462 - 929
Target Start/End: Complemental strand, 27902196 - 27901736
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  27902196 attgcaaagacatttagaaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcctttctctcttc 27902097  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggg-aaaactactatttatacaaatagaaataactgccta 660  Q
    |||| |||||||||||||||||||||| |||||||||| ||||| |||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  27902096 catgtggataatttgagtgtaagttttgtgtatgattggattgtgacc--tttttcccttgggaaaaactactatttatacaaatagaaataactgccta 27901999  T
Q  661 gatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaatatccgttgctt-gaccttat 759  Q
    ||||||||||||||||||| |||| ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  27901998 gatttgaatttaaaactatgattgtagt-aactaacaaaacttatccattcgatttgaatttcgaatgtgtcttgaaaatatccgttgtttcgaccttat 27901900  T
Q  760 ctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagtccaacttcgataggaatga 859  Q
    |      || ||  ||| ||| |||  | |  |||| |||||||||||||| |||  | | ||||||| ||| ||||||| |||| ||||||| | || |    
T  27901899 c------ca-aaagaaactgctcttcaagagttttccgtctgtcgaaccgagacatgcaccttcaagtatctccagcaagcccaatttcgataaggataa 27901807  T
Q  860 aaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    ||  |||||| ||||||| ||||||||| ||||||||||||  ||| ||||||  || |||||||||||||    
T  27901806 aagaacaattccttcgattataaggtcaacctattttgactatatttaatgatgccctttaaaaatattgg 27901736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 243 - 739
Target Start/End: Original strand, 21381790 - 21382278
Alignment:
Q  243 taaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattt-aatgttattct 341  Q
    ||||||| |||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||||| | |||| ||   ||||||| ||| || ||||    
T  21381790 taaacaatcgctggtttaaaaatgtttacttgcaagatcaatcggtaaatcttaaggacatattgtgtctattatcttctggaaattttaatattgttct 21381889  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatc-ggtgtaaataaccataaatgaattgttca 440  Q
    || || | |||| ||||   ||| ||| ||||| |||||||||| ||||||||||||  ||||||||  | ||| |||||||   ||||||||||| |||    
T  21381890 tggagaa-cttggtaaaacgaagtaag-aaaaagcaatcgaatttaacccagttgaatccaatcgaagactggtataaataaaagtaaatgaattgctca 21381987  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    ||||||||||| ||  ||||       ||||||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||||||||  |||    
T  21381988 aaagaaacaagaaaggtgta-------aagacatttaagaaaatgaacttaaattgcattgatcgaatatagattggtacacatgttcatacattgtaac 21382080  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||| |||| |  | | | |||| ||||||||||    
T  21382081 ttgtgactcgtttctctcttccatgcgaataatttgagtgtaagctttttgtatgattgaatcgtgaccccttttcctttggaggaaaccactatttata 21382180  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaa 739  Q
    |||||||| |||| |||||| |||| |||| |||||||||| |||||| |||||||   ||||||||||||||||||||||||||| ||||||| ||||    
T  21382181 caaatagagataattgcctaaatttaaattaaaaactataactgcagt-aactaacagaacttatccattcgatttgaatttcgaatgtgtctttaaaa 21382278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 258 - 597
Target Start/End: Complemental strand, 27132077 - 27131748
Alignment:
Q  258 ttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattcttgaagcatcttgataa 357  Q
    ||||||||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||| || ||||||| | || | ||||||| | ||||||||    
T  27132077 ttaaaaatattcacttgcaagatcaactagtaaatcttaaggacatattgtgtttgttattttccataaatttattattgtacttgaagaa-cttgataa 27131979  T
Q  358 ataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaatt 457  Q
    | | ||| ||  ||||  |||||||||||||| |||||||| |||||||||||     ||||| |  |||| |||||| ||||||||||| |||||||||    
T  27131978 aaagaagtaatcaaaa--caatcgaattcaactcagttgaattcaatcgaaattatgttaaatgaaaataagtgaatttttcaaaagaaaaaagtaaatt 27131881  T
Q  458 gtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctct 557  Q
    |||       ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  27131880 gta-------aagacatttaagaaaatgaacttaaattgcattgattggatgtaaattggtacacatgttcatacagtgcaacttgtgactcgtttctct 27131788  T
Q  558 cttccatgcggataatttgagtgtaagttttttgtatgat 597  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  27131787 cttccatgaggataatttgagtgtaagttttgtgtatgat 27131748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 462 - 698
Target Start/End: Complemental strand, 50826555 - 50826321
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||| || || ||||  |||||| ||| |||| ||||||||||||||| ||||    
T  50826555 attgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttagtgcacagattcatagattgcaacctgtgactcgtttctcgcttc 50826456  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga-aataactgccta 660  Q
    ||  |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| | |||| || |||||||||||||||| ||||||||||||    
T  50826455 caaacggataatttgagtgtaagt-ttttgtatgattgaattgtaaccctttttt-cctaagaaaaattattatttatacaaatagagaataactgccta 50826358  T
Q  661 gatttgaatttaaaactataattgcagtaaactaacta 698  Q
    | ||| ||||||||||||||| ||||| ||||||||||    
T  50826357 g-tttaaatttaaaactataactgcagaaaactaacta 50826321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 462 - 644
Target Start/End: Complemental strand, 21076737 - 21076556
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| ||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||   || ||||    
T  21076737 attgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatacattgcaacttatgactcgtcagtcgcttc 21076638  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||||||||||||||||||||||| ||||||||||||||| ||| |||||| |||| | ||||||||||||||||||||    
T  21076637 catacggataatttgagtgtaagtttttagtatgattgaattgtgaccatttttt-cctaagaaaaactactatttatacaaa 21076556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 462 - 661
Target Start/End: Complemental strand, 23511787 - 23511587
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||| |||||||  ||||| | |||||||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||| || ||||    
T  23511787 attgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatcgcttc 23511688  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata-caaataga-aataactgcct 659  Q
    ||| |||||| |||||| |||||||||| ||||||||||||||| |||| ||||| |||| | |||||||||||||||| |||||||| ||||||| |||    
T  23511687 catacggatagtttgagcgtaagtttttagtatgattgaattgtgacccgttttt-cctaagaaaaactactatttataccaaatagagaataactacct 23511589  T
Q  660 ag 661  Q
    ||    
T  23511588 ag 23511587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 462 - 597
Target Start/End: Original strand, 16406733 - 16406868
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16406733 attgcaaagacatttaagaaaataaacttaaattgcattgattgaatgtcaattggtacacatgttcatacattataacttgtgactcgtttctctcttg 16406832  T
Q  562 catgcggataatttgagtgtaagttttttgtatgat 597  Q
     ||| ||||| ||| |||||||||||  ||||||||    
T  16406833 aatgtggatagtttaagtgtaagtttcgtgtatgat 16406868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 462 - 647
Target Start/End: Complemental strand, 21137832 - 21137648
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||| |||||||  ||||| | | |||||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||| || ||||    
T  21137832 attgcaaaggcatttaaagaaatgtattgaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatcgcttc 21137733  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||||| |||||| |||||||||| ||||||||||||||| | |  ||||| |||| | |||||||||||||||||||||||    
T  21137732 catacggatagtttgagcgtaagtttttagtatgattgaattgtgaacagttttt-cctaagaaaaactactatttatacaaatag 21137648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 462 - 644
Target Start/End: Complemental strand, 21310907 - 21310725
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| || || |||||  || ||||| |||||||||||||||| |||||| |||||||||| || ||||    
T  21310907 attgcaaagacatttaaagaaatgtattgaaattgcatggactgaataaaagttggtgcacatgttcatacattgcaacttctgactcgtttgtcgcttc 21310808  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||| | | |||||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||||||||||    
T  21310807 catacggacagtattgagtgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaa 21310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 490 - 641
Target Start/End: Complemental strand, 21550671 - 21550522
Alignment:
Q  490 taaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt 589  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||   |||||| ||||||||||||| |  ||||||||| ||||||||||||||||     
T  21550671 taaattgcattgattgaatgtaaattggtacacatattcatacattgtgacttgttactcgtttctctc-tgaatgcggatagtttgagtgtaagttttc 21550573  T
Q  590 tgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    |||||||||||||||| | || ||||| |||| | |||||||||||||||||    
T  21550572 tgtatgattgaattgtgatccgttttt-cctatgaaaaactactatttatac 21550522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 462 - 644
Target Start/End: Original strand, 22684596 - 22684778
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||| ||||||  ||||| | | |||||| |||||||||||| || |||||||||| |||||||| || ||||||||||||| ||| || ||||    
T  22684596 attgcaaagatatttaaagaaatgtattaaaattgcattgattgaatgaaagttggtacacaggttcatactttgcaacttgtgactcatttgtcgcttc 22684695  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||| | | ||||| |||||||||| ||||||||||||||| ||||| |||| ||||  |||||||||||||||||||||    
T  22684696 catacggacagtattgagcgtaagtttttagtatgattgaattgtgaccctgtttt-cctaaagaaaactactatttatacaaa 22684778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 506 - 647
Target Start/End: Complemental strand, 29305352 - 29305211
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||||||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  29305352 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 29305253  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||| ||||| |||| | |||||||||||||||||||||||    
T  29305252 tgacccgttttt-cctaagaaaaactactatttatacaaatag 29305211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 501 - 648
Target Start/End: Original strand, 31845655 - 31845802
Alignment:
Q  501 gattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattg 599  Q
    |||| |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||  |||||||||    
T  31845655 gatttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattg 31845754  T
Q  600 aattgttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    |||||| |||| ||||| |||| | ||||||||||||||||||||||||    
T  31845755 aattgtgacccgttttt-cctaagaaaaactactatttatacaaataga 31845802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 22809065 - 22809207
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| |  ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  22809065 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgttgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 22809164  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||| ||||||||||||||||||    
T  22809165 tgacccgttttt-cctaagaaaaaccactatttatacaaataga 22809207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 16406524 - 16406613
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattta 331  Q
    |||||||  |||| |||||||| || ||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16406524 gtaaacagtcgctggtttaaaattaattacttgcaagatcaaccagtaaatcttaaggtcatattgtgtttgttatttttcagaaattta 16406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 506 - 646
Target Start/End: Complemental strand, 27562032 - 27561892
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| |||||||||||||||||||| || ||||||| |||| | | ||||||||||||||||||||| |||||||||    
T  27562032 aatgaaaattggtgcacatattcatactttacaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtattattgaattg 27561933  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaata 646  Q
    | | ||| |||| | || | |||||| |||||||||||||||    
T  27561932 tga-cctgtttttcttaagaaaaacttctatttatacaaata 27561892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 514 - 641
Target Start/End: Complemental strand, 22086525 - 22086398
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | || ||||||||||||| ||||||||||||||| |||| |    
T  22086525 ttggtacacatattcatacttttcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaagtttttagtatgattgaattgtgacccat 22086426  T
Q  613 ttttccctagggaaaactactatttatac 641  Q
    |||| |||| | |||||||||||||||||    
T  22086425 tttt-cctaagaaaaactactatttatac 22086398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 1528651 - 1528793
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| ||  |||||| |||| | | |||||||||||||||| ||||||||||||||    
T  1528651 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgtttccatacggacagtattgagtgtaagtttttagtatgattgaattg 1528750  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| | || | |||||| |||||||||||||||||    
T  1528751 tgacccgttttt-cgtaagaaaaacttctatttatacaaataga 1528793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 462 - 605
Target Start/End: Complemental strand, 18530722 - 18530580
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||  |||||||||||  ||||||||||| |||||||||||||||||||||||||   |||||| |||   |||||| | || ||| | || |     
T  18530722 attgcaaaggaatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacggattcatatattttgacttgtaaatcatttttttc-ta 18530624  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgt 605  Q
     ||||||||| ||||||||||||||||||||||| |||||||||    
T  18530623 gatgcggatagtttgagtgtaagttttttgtatggttgaattgt 18530580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 506 - 615
Target Start/End: Original strand, 41368663 - 41368772
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| ||| ||||||||||| |||| ||||||||||||||    
T  41368663 aatgaaaattggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacaatattgagtgtaag-ttttagtatgattgaattg 41368761  T
Q  605 ttacccttttt 615  Q
    | |||||||||    
T  41368762 tgacccttttt 41368772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 637 - 760
Target Start/End: Complemental strand, 27130256 - 27130129
Alignment:
Q  637 tatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaac----gtgtc 732  Q
    ||||| ||||||||||| | |||| |||||||||| |||||| || |||  ||||||||| | ||||||| ||| |||||||||||||||     ||| |    
T  27130256 tatacgaatagaaataaatacctatatttgaatttgaaactaaaactgctataaactaacaacacttatctattggatttgaatttcgaatacatgtgcc 27130157  T
Q  733 ttgaaaatatccgttgcttgaccttatc 760  Q
    ||| |||||| |||||||||||||||||    
T  27130156 ttggaaatattcgttgcttgaccttatc 27130129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 410
Target Start/End: Complemental strand, 27902381 - 27902217
Alignment:
Q  242 gtaaacaaccgctagtttaaaaa-tatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattc 340  Q
    ||||||||||||| ||||||||| |||||| |||    ||||| |||||||||||||||||||||||||| |||||| ||   |||||||| | ||  ||    
T  27902381 gtaaacaaccgctggtttaaaaaatatttacttg----atcaaccagtaaatcttaaggacatattgtgtctgttatcttctggaaatttattattgctc 27902286  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaat 410  Q
    |||||| | |||||||||   ||| ||| |||||  |||| ||||||||| |||||||  ||||||||||    
T  27902285 ttgaag-aacttgataaaacgaagtaagaaaaaagaaatcaaattcaacctagttgaatccaatcgaaat 27902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 615
Target Start/End: Original strand, 41383570 - 41383679
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||||||||| ||||||| || | |||||| |||||||| || |||||||  ||| | | ||||||||||| |||| ||||||||||||||    
T  41383570 aatgaaaattggtacacatattcatactttgcgacttgtaactcgtttgtcgcttccatatggacagtattgagtgtaag-ttttagtatgattgaattg 41383668  T
Q  605 ttacccttttt 615  Q
    | |||||||||    
T  41383669 tgacccttttt 41383679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 21550908 - 21550824
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    ||||||||||||| ||||||||  | ||| ||||||||||||  ||||||||||  ||| ||||||||||||||||||| ||||||    
T  21550908 gtaaacaaccgctggtttaaaatcagttacttgcaagatcaactagtaaatcttgggga-atattgtgtttgttattttccagaaa 21550824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 22794192 - 22794269
Alignment:
Q  242 gtaaacaaccgctagtttaaaaa-tatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| |||| ||||||||| | |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  22794192 gtaaacaatcgctggtttaaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 22794269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 22808805 - 22808882
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| |||| |||| |||||| |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  22808805 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 22808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 21311128 - 21311060
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||||| |||| |||| |||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  21311128 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 21311060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 22794465 - 22794523
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccat 564  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || |||||||    
T  22794465 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccat 22794523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 21076959 - 21076882
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg-tttgttat 317  Q
    |||||||| |||| |||| |||||| || | |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  21076959 gtaaacaatcgctggtttcaaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgttat 21076882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 22684401 - 22684446
Alignment:
Q  267 tttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt 312  Q
    |||| |||||||||||| ||||||||||||||  ||||||||||||    
T  22684401 tttacttgcaagatcaaccagtaaatcttaagagcatattgtgttt 22684446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 26273726 - 26273641
Alignment:
Q  89 cggttccaccatctggcgatcctggacattcgtccaagctcaatcgctcctttctttatatatggtccaatccaatagcccattaa 174  Q
    ||||||||||||| | ||| |||||||| ||| ||   || ||||| | |||||||||||||||| |||| ||||||||| |||||    
T  26273726 cggttccaccatccgacgaccctggacactcgcccgtacttaatcgatactttctttatatatggcccaacccaatagccaattaa 26273641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 13880 - 14563
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattc 340  Q
    ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  13880 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgttttgttattttccagaaatttaatattattc 13979  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaa---caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgt 437  Q
    |||||| | |||||||||||||| ||||||| |||   |||||||||| ||||||||||||| |||||||||||| ||||||||||  |||||||| ||     
T  13980 ttgaagaa-cttgataaataaaataaagtaagaaaaagcaatcgaatttaacccagttgaacccaatcgaaatcgatgtaaataactgtaaatgaactgc 14078  T
Q  438 tcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattac 537  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||| |    
T  14079 tcaaaagaaacaagtaaattgtaaattgcaaagacatttaagaaaatgaacttaaaataaattgattgaatgtaaattggtacacatgttcatacattgc 14178  T
Q  538 aacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactattt 637  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  14179 aacttgtgactcgtttctctcttccatgcggataatttgagtgtaag-tttttgtatgattgaattgtgaccc-tttttccttagggaaaactactattt 14276  T
Q  638 atacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaa 737  Q
    |||||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  14277 atacaactagaaataactgcctagattcgaatttaaaactataactgcagt-aactaacaaaacttatccattcgatttgaatttcgaatgtgtcttgaa 14375  T
Q  738 aatatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagc 836  Q
    |||||||||||  |||||||||||  ||     || |||| ||||||| || | |||||||||||||||| ||| |||| | | ||||||  ||| ||||    
T  14376 aatatccgttgttttgaccttatccaaa-----aagaaaactgcccttcgagatctttctgtctgtcgaa-cgagacacgcaccttcaagcatctccagc 14469  T
Q  837 aagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    ||| |||||||||||| | || |||  |||||| ||| ||| | ||||||| | ||||||||||||||| ||||||| || |||||||||||||    
T  14470 aagcccaacttcgataaggataaaagaacaattcctttgattacaaggtcaacttattttgactgcatttaatgatagcctttaaaaatattgg 14563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 242 - 929
Target Start/End: Complemental strand, 12705 - 12031
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||| | ||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||  || |||     
T  12705 gtaaacaaccgttggtttaaaaatatttccttgcaagatcaattagtaaatcttagggacatattgtgtttgttattttccagaaatttaacattgttcc 12606  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaa 441  Q
    ||||| | || ||||||     ||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||   ||||||||||| ||||    
T  12605 tgaagaa-ctcgataaa-----gaaagtaaaaagcaatcaaattcaacccagttgaacccaattgaaatcggtgtaaataaaggtaaatgaattgctcaa 12512  T
Q  442 aagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaact 541  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||    
T  12511 aagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaattgcattggttgaatgcaaattggtacacatgttcatacattgcaact 12419  T
Q  542 tgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||  ||| ||||||||||||||||     
T  12418 tgtgacttgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgatttgtga-cctcttttcctaaggaaaaactactatttatat 12320  T
Q  642 aaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaata 741  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  12319 aaatagaaataactacctagatttgaatttaaaactataactgcaataaactaacaatacttatccattcgatttgaatttcgaatgtgtcttgaaaata 12220  T
Q  742 tccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttct-gtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagt 840  Q
    | ||||||||| ||||||| |||  |||||||||| ||||||| ||||||||| | | |  ||||||  |||||| ||||||| ||  | |||| |||||    
T  12219 ttcgttgcttgtccttatccgaa-ccacaacaaaactgcccttcgataactttttcgcccatcgaactaaaacacgcgctttcgagcattttcaacaagt 12121  T
Q  841 ccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    |||||||||||||||| || || ||||||||||| |||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  12120 ccaacttcgataggaaagagaaaacaatttcttcaatgacaaggtcaacctattttgactgcattaaataataacctttaaaaatattgg 12031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 1155 - 1829
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    |||||||||| || ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||| || |||     
T  1155 gtaaacaaccactggtttaaaaatatttacttgcaagatcaactagtaaatcttaaggacatattgtgtttgttattttccagaaatttaatattgttcc 1254  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaa 441  Q
    | ||| | || ||||||    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||   ||||||||||| ||||    
T  1255 taaagaa-ctcgataaa----agaaagtaaaaaacaatcaaattcaacccagttgaacccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaa 1349  T
Q  442 aagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaact 541  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  1350 aagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaact 1442  T
Q  542 tgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||| |||||||||||||||||    
T  1443 tgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgacttgtgaccc-tttttccttaggaaaaactactatttatac 1541  T
Q  642 aaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaata 741  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||| |||||||| |||||    
T  1542 aaatagaaataactacctagatttgaatttaaaactataattgcagtaaactaacgatgcatatccattcgatttgaatttcgaatgtgtcttggaaata 1641  T
Q  742 tccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagtc 841  Q
    |  ||||||||||||||||||||  || || |||| | || || |||||||||  |  |||||||| |||| ||  |||| | ||| | | |||||||||    
T  1642 tttgttgcttgaccttatctgaa-ccataaaaaaacttcctttcgataacttttcgcttgtcgaactgaaagacgtgcttccgagtatttccagcaagtc 1740  T
Q  842 caacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    ||||||||||| |||||| |  ||| || ||||||  | ||||||| ||||||||||||| |||  |||||| || |||||||||||||    
T  1741 caacttcgataagaatgagagaacagttccttcgaatacaaggtcaacctattttgactgaatttgatgatagcctttaaaaatattgg 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 336; Significance: 0; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 242 - 928
Target Start/End: Original strand, 18566746 - 18567423
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattc 340  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| || ||     
T  18566746 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaatcagtaaatcttaaggacatattgtgttttgttattttccagaaatttaatattgtt- 18566844  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    |||||| | | |||||||||||||||| || ||| |||||||||||||||||||||||| || || ||||  |||||||||||  ||||||||||| | |    
T  18566845 ttgaagaa-cgtgataaataaaagaaaatagaaagcaatcgaattcaacccagttgaacccagtcaaaatttgtgtaaataactgtaaatgaattgctaa 18566943  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| |||| ||||    
T  18566944 aaagaaacaagtaaattgtaaattgcaaagacatttaagaaaatgaacttaaagtgtattgtttgaatgtaaattggtacacatattcattcattgcaac 18567043  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| ||| ||||||  ||||||||||||||||||||||    
T  18567044 ttgtgactcgtttctctcttccatgcgggtaatttgagtgtaag-tttttgtatgatagaattgtgaccttttttt--ctagggaaaactactatttata 18567140  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||| |||||||||||||| | |||||||||||    
T  18567141 caaatagaaataattgcctagatttgaatttaaaacaataattgcagt-aactaacgaaacttatccattcaatttgaatttcgaatgcgtcttgaaaat 18567239  T
Q  741 atccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaag 839  Q
    ||||||||  |||||||||||      || ||  ||| ||||||| || |  ||| ||||||||||||||| |||| | | ||||||| ||| |||||||    
T  18567240 atccgttgttttgaccttatc------caaaaagaaactgcccttcgagagttttttgtctgtcgaaccgagacacgcaccttcaagtatctccagcaag 18567333  T
Q  840 tccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattg 928  Q
     ||||||| |||| | || |||  |||||| ||||||| | ||||||| |||| |||||||||||| ||||||| || ||||||||||||    
T  18567334 cccaactttgataaggataaaagaacaattccttcgattacaaggtcaacctactttgactgcatttaatgatagcctttaaaaatattg 18567423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 242 - 720
Target Start/End: Complemental strand, 1658984 - 1658509
Alignment:
Q  242 gtaaacaaccgctagtttaaaa-atatttatttgcaagatcaatcagtaaatcttaaggacatatt-gtgtttgttatttttcagaaatttaatgttatt 339  Q
    ||||||||||||| |||||||| ||| ||| || ||||||||| |||||  ||||||||||||||| ||| |||||||||| |||||||| |||||||||    
T  1658984 gtaaacaaccgcttgtttaaaacatagttacttacaagatcaaccagta--tcttaaggacatatttgtgcttgttattttccagaaattgaatgttatt 1658887  T
Q  340 cttgaagcatcttgataaataaaagaaagtaaaaaa---caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattg 436  Q
    ||||||| | |||||||||||||| ||||||| |||   |||||||||||||||||||||||| |||| ||||| |||||| |||||  |||||||||||    
T  1658886 cttgaagaa-cttgataaataaaataaagtaagaaaaagcaatcgaattcaacccagttgaacccaattgaaattggtgtagataactgtaaatgaattg 1658788  T
Q  437 ttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacatta 536  Q
     ||||||||||||||||||||| | |||| ||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||     
T  1658787 ctcaaaagaaacaagtaaattgcaaattgtaaagacatttaaagaaatgaacttgaattgtattgattgaatgtaagttggtacacatattcatacattg 1658688  T
Q  537 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatt 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || |||||||||||| ||||||||||| ||    
T  1658687 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt-ttttgtatgatagaattgtgacacttttttccctaaggaaaactactgtt 1658589  T
Q  637 tatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaat 720  Q
    |||||||    |||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  1658588 tatacaa----aaataactgcctagatttgaatttaaaactataactgcagtaaactaacgaaacttatccattcgatttgaat 1658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 376 - 869
Target Start/End: Complemental strand, 10267484 - 10266999
Alignment:
Q  376 caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagattgcaaagacatt 475  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||   ||||| |||| | ||||||||||||||||||||| ||||||||||||||    
T  10267484 caatcgaattcaacccaattgaacccaatcgaaatcggtgtaaataactgcaaatgtattgctaaaaagaaacaagtaaattgtaaattgcaaagacatt 10267385  T
Q  476 taagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataattt 575  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  10267384 taagaaaatgaacttaaagtgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgattcgtttctctcttccatgcggataattt 10267285  T
Q  576 gagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 675  Q
    |||||||||| ||||||||||||||||| ||  ||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  10267284 gagtgtaagt-ttttgtatgattgaatt-ttgaccacttttccttagggaaaactactatttatacaaataaaaacaactgcctagattcgaatttaaaa 10267187  T
Q  676 ctataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaatatccgttg-cttgaccttatctgaattcacaacaa 774  Q
    |||||| |||||| ||||||| | ||||||||||||||||||||||  ||| |||||||||||||  ||||||  |||||||||||       | || ||    
T  10267186 ctataactgcagt-aactaacaaaacttatccattcgatttgaattctgaatgtgtcttgaaaattaccgttgttttgaccttatc------aaaaagaa 10267094  T
Q  775 aaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatt 869  Q
    ||  |||||| || |  |||| ||||||||||| || |||||| | ||||||| ||| ||||||| |||||||||||| |||| ||| |||||||    
T  10267093 aaccgcccttcgagatttttccgtctgtcgaactgagacacacaccttcaagtatctccagcaagcccaacttcgataagaataaaaggacaatt 10266999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 243 - 739
Target Start/End: Original strand, 31079507 - 31079998
Alignment:
Q  243 taaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggac---atattgtgtttgttatttttcagaaatttaatgttatt 339  Q
    ||||||| || | ||||||||||||| | |||||||||||| ||||||| |||||||||   ||||||||| | |||| ||   |||||||||| |||||    
T  31079507 taaacaatcgttggtttaaaaatattaacttgcaagatcaaccagtaaaccttaaggacgacatattgtgtctattatcttctggaaatttaatattatt 31079606  T
Q  340 cttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttc 439  Q
    ||||||| | |||| ||||   ||| ||| ||||| |||||||||||||||||||  ||  ||||||||| |||| |||| ||   ||||||||| | ||    
T  31079607 cttgaagaa-cttggtaaaacgaagtaag-aaaaagcaatcgaattcaacccagtcaaatccaatcgaaaccggtataaacaaaagtaaatgaat-gctc 31079703  T
Q  440 aaaagaaacaagtaaattgtagattgcaaagacatttaagaaaa-tgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattaca 538  Q
    |||||||||||| ||  | ||       ||||||||||| |||| ||||||||||||| |||||| |||| || ||||||||||||||||| ||||| ||    
T  31079704 aaaagaaacaagaaagctcta-------aagacatttaaaaaaaatgaacttaaattgcattgatcgaatatagattggtacacatgttcacacattgca 31079796  T
Q  539 acttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagg-gaaaactactattt 637  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | || | ||||||||||||    
T  31079797 atttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgacccctttttcctttggaggaaactactattt 31079896  T
Q  638 atacaaatagaaataactgcctagatttgaattt-aaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttga 736  Q
    |||||||||||||||||||||||   || ||||| |||||||||| |||||| ||| |||   ||||||||||||  ||||||||||||| ||||||| |    
T  31079897 atacaaatagaaataactgcctaagcttaaatttaaaaactataactgcagt-aaccaacagaacttatccattcagtttgaatttcgaatgtgtcttaa 31079995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 462 - 668
Target Start/End: Original strand, 3077903 - 3078107
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||| |||||||||  ||||    
T  3077903 attgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttggtacacagattcatacattacaacttgtggctcgtttcttgcttc 3078002  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctag 661  Q
    ||| |||||||||||||  |||| |||||||||||||||||||| | ||||||||  ||| | ||||||||||||||||||||||| |||||||||||||    
T  3078003 catacggataatttgagcttaag-tttttgtatgattgaattgtga-ccttttttttctaagaaaaactactatttatacaaataggaataactgcctag 3078100  T
Q  662 atttgaa 668  Q
    |||||||    
T  3078101 atttgaa 3078107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 462 - 660
Target Start/End: Original strand, 49526422 - 49526621
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctc-tt 560  Q
    |||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  49526422 attgcaaagacaattaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttt 49526521  T
Q  561 ccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgccta 660  Q
      ||||||||| ||||| |||||||||| |||||||||| ||||| ||||||||| ||  ||| ||||||||||||||||  |||||||| |||| ||||    
T  49526522 gaatgcggatagtttgattgtaagttttgtgtatgattggattgtcaccctttttccctaaggaaaaactactatttatattaatagaaaaaactaccta 49526621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 458 - 618
Target Start/End: Complemental strand, 50687717 - 50687557
Alignment:
Q  458 gtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctct 557  Q
    |||||||||||||||| |||||| ||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  50687717 gtagattgcaaagacaattaagagaacaaacttaaattgcatttattgaatgtaaattggtacacatgttcatacattataacttgtgactcgtttgtct 50687618  T
Q  558 cttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
    |||  |||||||||   |||||||||||||| ||||||||||  |||| |||| |||||||    
T  50687617 cttgaatgcggatagcctgagtgtaagttttgtgtatgattggtttgtgacccgtttttcc 50687557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 491 - 644
Target Start/End: Original strand, 14022415 - 14022567
Alignment:
Q  491 aaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagtttttt 590  Q
    |||||| ||||||||||||||| || |||||||| |||||||||| |||||||||||||||   |  |||| || |||| |||||||||||||||||||     
T  14022415 aaattgcattgattgaatgtaagttagtacacatattcatacattgcaacttgtgactcgtcagttgcttctatacggacaatttgagtgtaagttttta 14022514  T
Q  591 gtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||||||||||||||| |||||||||| ||||   ||||||||||||||||||||    
T  14022515 gtatgattgaattgtgaccctttttt-cctaaaaaaaactactatttatacaaa 14022567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 514 - 647
Target Start/End: Complemental strand, 18108816 - 18108683
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| ||||||    
T  18108816 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccctt 18108717  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  18108716 tttt-cctaagaaaaactactatttatacagatag 18108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 501 - 646
Target Start/End: Original strand, 13277216 - 13277361
Alignment:
Q  501 gattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattg 599  Q
    |||| |||| |||||||| ||||| ||||||| || ||||| ||||||||||| || ||||||| |||| | | |||||||||||||||| |||||||||    
T  13277216 gatttaatgaaaattggtgcacatattcatactttgcaactcgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 13277315  T
Q  600 aattgttacccttttttccctagggaaaactactatttatacaaata 646  Q
    |||||| | ||| |||| |||| | ||||||||||||||||||||||    
T  13277316 aattgtga-cctgtttttcctaagaaaaactactatttatacaaata 13277361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 501 - 646
Target Start/End: Original strand, 13292594 - 13292739
Alignment:
Q  501 gattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattg 599  Q
    |||| |||| |||||||| ||||| ||||||| || ||||| ||||||||||| || ||||||| |||| | | |||||||||||||||| |||||||||    
T  13292594 gatttaatgaaaattggtgcacatattcatactttgcaactcgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 13292693  T
Q  600 aattgttacccttttttccctagggaaaactactatttatacaaata 646  Q
    |||||| | | | |||| |||| | ||||||||||||||||||||||    
T  13292694 aattgtga-catgtttttcctaagaaaaactactatttatacaaata 13292739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 506 - 638
Target Start/End: Original strand, 14714146 - 14714278
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | || ||||||| ||||| ||||||||||||||    
T  14714146 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattg 14714245  T
Q  605 ttacccttttttccctagggaaaactactattta 638  Q
    | |||| ||||| |||| | ||||||||||||||    
T  14714246 tgacccgttttt-cctaagaaaaactactattta 14714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 506 - 638
Target Start/End: Original strand, 14775826 - 14775958
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | || ||||||| ||||| ||||||||||||||    
T  14775826 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattg 14775925  T
Q  605 ttacccttttttccctagggaaaactactattta 638  Q
    | |||| ||||| |||| | ||||||||||||||    
T  14775926 tgacccgttttt-cctaagaaaaactactattta 14775958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 50687922 - 50687833
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattta 331  Q
    ||||||| |||||  ||||||| || ||| |||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  50687922 gtaaacagccgctgatttaaaattagttacttgcaagatcaaccagtaaatcttaatgacatattgtatttgttattttccagaaattta 50687833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 526 - 647
Target Start/End: Original strand, 14556950 - 14557071
Alignment:
Q  526 ttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggg 624  Q
    ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||| ||||| ||||||||||||||| | ||| ||||  ||| |     
T  14556950 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgattgaattgtga-cctgttttttctaaga 14557048  T
Q  625 aaaactactatttatacaaatag 647  Q
    |||||||||||||||||||||||    
T  14557049 aaaactactatttatacaaatag 14557071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 486 - 617
Target Start/End: Original strand, 27812297 - 27812442
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgttt--------------ctctcttccatgcggata 571  Q
    ||||||||||| ||  |||||||||||||||||| |||| |||||||||| |||||||||||| ||||              ||||||   |||||||||    
T  27812297 aacttaaattgcataaattgaatgtaaattggtagacatattcatacattgcaacttgtgacttgtttgtttttgtttgtttctctctgaaatgcggata 27812396  T
Q  572 atttgagtgtaagttttttgtatgattgaattgttacccttttttc 617  Q
    ||||||||||||||||| |||||||||||||||| |||| ||||||    
T  27812397 atttgagtgtaagttttctgtatgattgaattgtgacccgtttttc 27812442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 526 - 647
Target Start/End: Original strand, 15153638 - 15153759
Alignment:
Q  526 ttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggg 624  Q
    ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||| ||||| ||||||| ||||||| | ||| ||||  ||| |     
T  15153638 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgatcgaattgtga-cctgttttttctaaga 15153736  T
Q  625 aaaactactatttatacaaatag 647  Q
    |||||||||||||||||||||||    
T  15153737 aaaactactatttatacaaatag 15153759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 49526214 - 49526306
Alignment:
Q  242 gtaaacaaccgctagtttaaaaa--tatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttg-ttatttttcagaaattta 331  Q
    ||||||||||| | |||||||||  || ||| |||||||| ||| |||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  49526214 gtaaacaaccgttcgtttaaaaaattaattacttgcaagaacaaccagtaaatcttaaggacaaattgtgtttgtttattttccagaaattta 49526306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 14713872 - 14713949
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| |||| |||| |||||| |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  14713872 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 14713949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 3077685 - 3077741
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaag 298  Q
    |||||||| |||| |||| ||||| |||| |||||||||||| ||||||||||||||    
T  3077685 gtaaacaatcgctcgtttcaaaatgtttacttgcaagatcaaccagtaaatcttaag 3077741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 14775571 - 14775629
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||| |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  14775571 aaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 14775629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 335; Significance: 0; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 244 - 929
Target Start/End: Complemental strand, 10624704 - 10624017
Alignment:
Q  244 aaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattctt 342  Q
    ||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| |||||||| || ||| ||||| ||||||||    
T  10624704 aaacaaccgcaggtttaaaaatatttacttgcaagattaaccagtaaatcttaaggacatattgtgttttgttattttccaaaaacttaatattattctt 10624605  T
Q  343 gaagcatcttgataaataaaagaaagtaaaaaa---caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttc 439  Q
    |||| | |||||||||||||| ||||||| |||   |||| |||||||||||| |||||| |||||||||||||||||||||||  ||||||||||| ||    
T  10624604 gaagaa-cttgataaataaaataaagtaagaaaaagcaattgaattcaacccatttgaacccaatcgaaatcggtgtaaataactgtaaatgaattgctc 10624506  T
Q  440 aaaagaaacaagtaaattgtagattgcaaagacattt-aagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattaca 538  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||    
T  10624505 aaaagaaacaagtaaattgtaaattgcaaagacattttaagaaaatgaacttaaagtgtatttattgaatgtaaattggtacacatgttcatacattgca 10624406  T
Q  539 acttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactact----a 634  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||||    |    
T  10624405 acttgtgactcatttatctcttccatgcggataatttgagtgtaagt-ttttgtatgatagaattgtgacccttttttccctaggaaaaactactattaa 10624307  T
Q  635 tttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtctt 734  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||||||| |||||||    
T  10624306 tttatacaaatagaaataactgcctatatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcgatttgaatttcgaatgtgtctt 10624208  T
Q  735 gaaaatatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttc 833  Q
    ||||||||||||||  |||||||||||      || ||  ||| ||||||| || |  ||||||||||||||||||| | ||   | ||||||| ||| |    
T  10624207 gaaaatatccgttgttttgaccttatc------caaaaagaaactgcccttcgagagttttctgtctgtcgaaccgagatacgtaccttcaagtatctcc 10624114  T
Q  834 agcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    || ||| |||||||||||| | || |||  |||||| ||||||| | ||||||| |||| |||||||||||| ||||||| || |||||||||||||    
T  10624113 agtaagcccaacttcgataaggataaaagaacaattccttcgattacaaggtcaacctactttgactgcatttaatgatagcctttaaaaatattgg 10624017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 462 - 929
Target Start/End: Complemental strand, 40933056 - 40932588
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  40933056 attgcaaagacatttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatattcatacattgcaacttgtgactcgtttatctcttc 40932957  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctag 661  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  40932956 catgcagataatttgagtgttagttttttgtatgatagaattgtgaccc-tttttccctagggaaaactactatttatacaaattgaaataactgtctag 40932858  T
Q  662 atttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaatatccgttgcttgaccttatct 761  Q
    |||||||| ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||||||     
T  40932857 atttgaatctaaaactataactacagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtctggaaaatatctgttacttgaccttatcc 40932758  T
Q  762 gaattcacaacaaaaa-tgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagtccaacttcgataggaatg-a 859  Q
    |||  ||||||||||| || | || |||||||||  | |||||| ||  || ||| ||||||||||  | |||||||||||||| ||||||| ||||| |    
T  40932757 gaa-ccacaacaaaaactgtcattcgataacttttcgcctgtcggactaaatcacgcgctttcaagcattttcagcaagtccaatttcgatatgaatgaa 40932659  T
Q  860 aaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataac-cttaaaaatattgg 929  Q
    ||| ||||| |||||||||| ||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  40932658 aaaaacaatctcttcgatgacaaggtcgacctattttgactgcattaaatgataacttttaaaaatattgg 40932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 242 - 923
Target Start/End: Complemental strand, 18156532 - 18155866
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||| ||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| | || ||||    
T  18156532 gtaaacagccgctggtttaaaaatagttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgttatcttccagaaatttattattgttct 18156433  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaa--tgaattgttc 439  Q
    ||||| | |||||||||   ||||||  ||||| |||||| |||||||| |||||||  |||||||| |  |   |||  || |  ||  ||||||| ||    
T  18156432 tgaagaa-cttgataaa---aagaaataaaaaagcaatcggattcaacctagttgaatccaatcgaagttaggcaaaaatacaagtaacgtgaattgctc 18156337  T
Q  440 aaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaa 539  Q
    ||| |||||||||||||||||       |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||  |||||||||| |||    
T  18156336 aaacgaaacaagtaaattgta-------aagacatttaggaaaatgaacttaaattgcattgattgaatataaattggtacacagattcatacattgcaa 18156244  T
Q  540 cttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttat 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||||||||| |||| ||| |||||||||||    
T  18156243 cttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtga-ccttttttccttaggaaaagctactatttat 18156145  T
Q  640 acaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcga-tttgaatttcgaacgtgtcttgaaa 738  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| | |||||||||||||| ||||||||||||| |||||||||||    
T  18156144 acaaatagaaataactgcctagatttaaatttaaaactataaatgcagt-aactaacgaaacttatccattcgattttgaatttcgaatgtgtcttgaaa 18156046  T
Q  739 atatccgttg-cttgaccttatctgaattcacaacaaaaatgcccttt-gataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagc 836  Q
    ||| ||||||  |||||||||||      || ||  ||| ||| |||| || |  |||| |||||||||||||| ||||   | ||||||| ||||||||    
T  18156045 ataaccgttgttttgaccttatc------ca-aaagaaactgctctttcgagagttttccgtctgtcgaaccgagacacgtaccttcaagtatcttcagc 18155953  T
Q  837 aagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataaccttaaaaa 923  Q
    ||| |||||||||||| | ||||||  |||||| ||||||| | || |||| |||| |||||||||||| ||||||| |||||||||    
T  18155952 aagcccaacttcgataaggatgaaagaacaattccttcgattacaatgtcaacctactttgactgcatttaatgatatccttaaaaa 18155866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 272 - 723
Target Start/End: Original strand, 20024225 - 20024668
Alignment:
Q  272 ttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattt--aatgttattcttgaagcatcttgataaataaaagaaagt 369  Q
    |||||||||||| |||||||||||||||| ||||||||| | |||| ||  ||||||||  |   || ||||||||| | |||||||||   ||  |||     
T  20024225 ttgcaagatcaaccagtaaatcttaaggatatattgtgtctattatcttctagaaattttgatatttgttcttgaagaa-cttgataaaacgaaataaga 20024323  T
Q  370 aaaaaacaatcgaattcaacccagttgaactcaatcgaa-atcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagattgcaa 468  Q
    ||||| |||| ||||||||||||||||||  |||||||| | |||  ||| |||   | ||||| ||| | |||||||||||||||||||       |||    
T  20024324 aaaaagcaatagaattcaacccagttgaatccaatcgaagaccgggataagtaaaagtgaatgagttgcttaaaagaaacaagtaaattg-------caa 20024416  T
Q  469 agacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcgg 568  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  20024417 agacatttaagaaaatgaacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttgtgactcgtttctctcttccatgcgg 20024516  T
Q  569 ataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctagatttgaa 668  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||||| || |  ||||||||||||||||| |||||||||||||||||||||||      
T  20024517 ataatttgagtgtaag-tttttgtatgattgaattgtgaccc-tttttccttaagagaaactactatttatacagatagaaataactgcctagatttg-g 20024613  T
Q  669 tttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttc 723  Q
    ||||||||||||| ||||| ||||||||||  |||| ||||| ||||||||||||    
T  20024614 tttaaaactataactgcagaaaactaactaatcttagccatttgatttgaatttc 20024668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 256 - 760
Target Start/End: Complemental strand, 16832473 - 16831980
Alignment:
Q  256 gtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattcttgaagcatcttgat 355  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | || || |||||| | ||||||    
T  16832473 gtttaaaaatatttacatgcaagatcaaacagtaaatcttaaggacatattgtgtttgttattttccagaaatttattattgtttttgaagaa-cttgat 16832375  T
Q  356 aaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaa 455  Q
    ||| | ||| || |||||  ||||||||||||||          ||||| ||| |     ||||| |  |||| ||||||| ||||||||||||||||||    
T  16832374 aaaaagaagtaattaaaa--caatcgaattcaact---------tcaattgaagttatgttaaatgaaaataagtgaattgctcaaaagaaacaagtaaa 16832286  T
Q  456 ttgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttct 555  Q
    |||||       |||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16832285 ttgta-------aagacataaaagaaaatgaatttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttct 16832193  T
Q  556 ctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggga-aaactactatttatacaaatagaaataac 654  Q
    |||||| |||||||||||||||||||||||||| |||||||||| ||||| | |     |||||| | || |||||||||||||||| ||||||||||||    
T  16832192 ctcttcaatgcggataatttgagtgtaagttttgtgtatgattggattgtgatc--acgttcccttgcgagaaactactatttatactaatagaaataac 16832095  T
Q  655 tgcctag----atttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgt-----cttgaaaatatccg 745  Q
    | |||||    |||||||||| ||| || ||  ||   |||| ||| | |||||||||||||||||||||||||||  |||      ||| |||||||||    
T  16832094 ttcctagctatatttgaatttgaaattacaacggctaaaaacgaacaacacttatccattcgatttgaatttcgaatatgtgcgcctttggaaatatccg 16831995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 40936899 - 40936793
Alignment:
Q  352 tgataaataaaagaaagtaaaaaac-aatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttcaaaagaaacaa 450  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  40936899 tgataaataaaagaaagtaaaaaagtaattgaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatgaattgctcaaaagaaacaa 40936800  T
Q  451 gtaaatt 457  Q
    |||||||    
T  40936799 gtaaatt 40936793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 21530438 - 21530296
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||||| | |||||||||||||||| ||||||||||||||    
T  21530438 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattg 21530339  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||| |||||||||||||||||    
T  21530338 tgacccgttttt-cctaagaaaaacttctatttatacaaataga 21530296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 26274096 - 26274238
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  26274096 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcacttccatacggacagtattgagtgtaagtttttagtatgattgaattg 26274195  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||| |||||||||||||||||    
T  26274196 tgacccgttttt-cctaagaaaaacttctatttatacaaataga 26274238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 473 - 618
Target Start/End: Original strand, 19859548 - 19859692
Alignment:
Q  473 atttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataa 572  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||  ||||||||||   |||||| |||||||||||| ||  |||  ||||     
T  19859548 atttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacaaattcatacattgggacttgtaactcgtttctct-ttagatgttgatag 19859646  T
Q  573 tttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
    |||||||||||||||| |||||  ||||||||| |||| |||||||    
T  19859647 tttgagtgtaagttttctgtattgttgaattgtgacccgtttttcc 19859692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 519 - 648
Target Start/End: Complemental strand, 21504758 - 21504629
Alignment:
Q  519 acacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttc 617  Q
    |||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |||||     
T  21504758 acacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgttttt- 21504660  T
Q  618 cctagggaaaactactatttatacaaataga 648  Q
    |||| | |||||| |||||||||||||||||    
T  21504659 cctaagaaaaacttctatttatacaaataga 21504629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 506 - 647
Target Start/End: Original strand, 21982612 - 21982753
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| |||||||  | ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  21982612 aatgaaaattggtgcacatattcatactctgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 21982711  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | | ||| |||| |||| | |||||||||||||||| ||||||    
T  21982712 tga-cctatttttcctaagaaaaactactatttatataaatag 21982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 486 - 618
Target Start/End: Complemental strand, 19212528 - 19212397
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt 585  Q
    ||||||||||| ||||||||||||||||||||||||||  ||| ||||||   |  ||| |||||||| |||||   ||||||||| |||||||||||||    
T  19212528 aacttaaattgcattgattgaatgtaaattggtacacagattcgtacattttgatgtgtaactcgtttatctctaa-atgcggatagtttgagtgtaagt 19212430  T
Q  586 tttttgtatgattgaattgttacccttttttcc 618  Q
    ||||| |||||||||||||| |||  |||||||    
T  19212429 tttttatatgattgaattgtgacctgtttttcc 19212397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 514 - 648
Target Start/End: Original strand, 20506326 - 20506460
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||| ||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||  ||||||||||||||| | |||     
T  20506326 ttggtgcacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtga-cctg 20506424  T
Q  613 ttttccctagggaaaactactatttatacaaataga 648  Q
    |||| |||| | ||||||||||||||||||||||||    
T  20506425 tttttcctaagaaaaactactatttatacaaataga 20506460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 19212760 - 19212680
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttc 322  Q
    |||||||||||||  ||||||| || |||||||||||||| | |||||||||||   || |||||||||||||||||||||    
T  19212760 gtaaacaaccgctgatttaaaattagttatttgcaagatcgaccagtaaatctttgagatatattgtgtttgttatttttc 19212680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 18024672 - 18024605
Alignment:
Q  243 taaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgt 310  Q
    |||||||  ||| |||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||    
T  18024672 taaacaattgctggtttaaaaatgtttacttgcaaaatcaaccagtaaatcttaaggacatattgtgt 18024605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 26836010 - 26836088
Alignment:
Q  248 aaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    ||||||| ||||| ||||  ||| |||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  26836010 aaccgctggtttacaaatggttacttgcaagatcaaccagtaaatctt-aggacatatcgtgtttgttattttccagaaa 26836088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 20249243 - 20249339
Alignment:
Q  502 attgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattg 599  Q
    |||||||||||||| |||||||  ||||||||||   |||||| || |||||||||| |  ||| ||||| ||||||| |||||||||||||||||||    
T  20249243 attgaatgtaaattagtacacagattcatacattgtgacttgttacccgtttctctc-tgaatgtggatagtttgagtataagttttttgtatgattg 20249339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 937 - 977
Target Start/End: Original strand, 1279874 - 1279914
Alignment:
Q  937 cgcgcacaacagaaacacattcttcttcttcagctctctgc 977  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  1279874 cgcgcacaacataaacacattcttcttcttcagctctctgc 1279914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 20248995 - 20249074
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttc 322  Q
    ||||||||||||| ||||| ||||  ||| |||||||||||| ||||||||||||| |||| ||| |||||||| ||||||    
T  20248995 gtaaacaaccgctggtttacaaatgattacttgcaagatcaagcagtaaatcttaa-gacaaattttgtttgttctttttc 20249074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 486 - 605
Target Start/End: Original strand, 17432637 - 17432758
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattaca-acttgtgactcgtttctctcttccatgcggataatttgagtgt--a 582  Q
    ||||||||||| ||  ||||||||||||||||||||||  ||||||||||    |||||| ||||||||||| |||  |||| |||| |||||||||  |    
T  17432637 aacttaaattgcataaattgaatgtaaattggtacacagattcatacatttgttacttgttactcgtttctc-cttgaatgcagatagtttgagtgtgta 17432735  T
Q  583 agttttttgtatgattgaattgt 605  Q
    |||||| ||| ||||||||||||    
T  17432736 agttttgtgtgtgattgaattgt 17432758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 21508201 - 21508133
Alignment:
Q  242 gtaaacaaccgctagtttaaa-aatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    ||||||||||||| |||| || ||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  21508201 gtaaacaaccgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 21508133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 21530711 - 21530643
Alignment:
Q  242 gtaaacaaccgctagtttaaa-aatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    ||||||||||||| |||| || ||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  21530711 gtaaacaaccgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 21530643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 21982358 - 21982416
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||| |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  21982358 aaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 21982416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 42615101 - 42615047
Alignment:
Q  127 ctcaatcgctcctttctttatatatggtccaatccaatagcccattaatccactt 181  Q
    |||||||| | |||||||||||| |||| ||| ||||||| ||||||||||||||    
T  42615101 ctcaatcgatactttctttatatttggttcaacccaatagtccattaatccactt 42615047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 242 - 929
Target Start/End: Complemental strand, 4082 - 3419
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||    
T  4082 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgctattttccaaaaatttaacgttattct 3983  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaa-caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattgttca 440  Q
    ||||| | |||||||||||||| ||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||   ||||||||||| |||    
T  3982 tgaagaa-cttgataaataaaataaagtaaaaaggcaatcgaattcaacccagttgaatccaatcgaaatcggtgtaaataaaggtaaatgaattgctca 3884  T
Q  441 aaa-gaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaa 539  Q
    ||| ||||||||| |||||||       ||||  |||||| |||||||||| |||| |||||||||||| ||||||||| |||||||||||||||| |||    
T  3883 aaaagaaacaagtgaattgta-------aagatgtttaaggaaatgaacttgaattatattgattgaatataaattggt-cacatgttcatacatttcaa 3792  T
Q  540 cttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttat 639  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||| ||||    
T  3791 cttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgacccatttt-ccctagggaaaactactacttat 3693  T
Q  640 acaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaa 739  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||    
T  3692 acaaatagaaataactgcctagatttgaattaaaaactataactgcagtaaactaacgacacttatccatttgatttgaatttcgaatgtgtcttgaaaa 3593  T
Q  740 tatccgttgcttgaccttatctgaattcacaacaaaaa-tgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaa 838  Q
                     |||||||| |||||||||||| || |||| ||||||||||   |||||||||  |||||||||||||| ||| | ||||||||    
T  3592 -----------------tatctgaa-tcacaacaaaaattgtccttcgataactttccacctgtcgaactaaaacacacgctttcgagtattttcagcaa 3511  T
Q  839 gtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    ||| || |||||||||| ||| || |||||||||| |||||| |||||| ||||||||||||  |||||||||||||| |||||||||||||    
T  3510 gtctaagttcgataggagtgagaaaacaatttctttgatgattaggtcaacctattttgactatattaaatgataacctttaaaaatattgg 3419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 242 - 929
Target Start/End: Original strand, 40342600 - 40343268
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    |||||||||||||  |||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  40342600 gtaaacaaccgctgatttaaaaatatttacttgtaagatcaaccagtaaatcttagggacatattgtgtttgttattttccagaaatttaaagttattct 40342699  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaa-tgaattgttca 440  Q
    ||||| | ||||||||||||||||||||||||  ||||||||||||||||| ||||| |||| |||||| |||| ||||||   |||| | || ||||||    
T  40342700 tgaagaa-cttgataaataaaagaaagtaaaag-caatcgaattcaacccaattgaattcaaccgaaattggtg-aaataaaagtaaagtaaaatgttca 40342796  T
Q  441 aaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaac 540  Q
    ||||||||||||||||||       ||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  40342797 aaagaaacaagtaaattg-------caaagacatttaagaaaacaaacttaaattgcattgattaaatgtaaattggtacacatgttcatacattgcaac 40342889  T
Q  541 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttata 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||  || ||||||||||||||||||    
T  40342890 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtga-ccacttttcattaaggaaaactactatttata 40342988  T
Q  641 caaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaat 740  Q
    ||||||||||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  40342989 caaatagaaataactacctagatttgaattcaaaactataactgtagtaaactaacaatacttattcattcgatttgaatttcgaatgtgtcttgaaaat 40343088  T
Q  741 atccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttct-gtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaag 839  Q
    ||| |||||||||||||||| ||         |||  ||||||| ||||||||| |   | |||||||  |||||| || |||| ||  | |||||||||    
T  40343089 atcggttgcttgaccttatccga---------aaacctgcccttcgataactttttcacccgtcgaactaaaacacgcgttttcgagcattttcagcaag 40343179  T
Q  840 tccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    ||||||||||||| ||| || |  |||||||||||||| | ||||||| |||||||| ||||| || ||||||| || |||||||||||||    
T  40343180 tccaacttcgatacgaaagaga--acaatttcttcgatcacaaggtcaacctattttaactgcgtttaatgatagcctttaaaaatattgg 40343268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 430 - 929
Target Start/End: Original strand, 10827729 - 10828216
Alignment:
Q  430 tgaattgttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttca 529  Q
    ||||||| |||||||||||||||||||||||       |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||  ||||    
T  10827729 tgaattgctcaaaagaaacaagtaaattgta-------aagacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattca 10827821  T
Q  530 tacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccc-tagggaaaa 628  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| |||||||||    
T  10827822 tacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaa 10827921  T
Q  629 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacg 728  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||| |||||||||||||| |    
T  10827922 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcaatttgaatttcgaatg 10828020  T
Q  729 tgtcttgaaaatatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagt 827  Q
    |||||||||||||| |||||  |||||||||||      || ||  ||| ||| ||| || |  |||| ||||||||||||||||||||| | ||  |||    
T  10828021 tgtcttgaaaatattcgttgttttgaccttatc------ca-aaagaaactgctcttcgagagttttccgtctgtcgaaccgaaacacacacctttgagt 10828113  T
Q  828 gtcttcagcaagtccaacttcgataggaatgaaaag-acaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaata 925  Q
     |||  |||||| ||||||||||||   | |||||| |||| | ||||||| | ||||||| |||| |||||||||||| ||||||| || |||||||||    
T  10828114 atctctagcaagcccaacttcgataatga-gaaaagaacaaatccttcgattacaaggtcaacctactttgactgcatttaatgataccctttaaaaata 10828212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 430 - 929
Target Start/End: Original strand, 11021521 - 11022008
Alignment:
Q  430 tgaattgttcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttca 529  Q
    ||||||| |||||||||||||||||||||||       |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||  ||||    
T  11021521 tgaattgctcaaaagaaacaagtaaattgta-------aagacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattca 11021613  T
Q  530 tacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccc-tagggaaaa 628  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| |||||||||    
T  11021614 tacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaa 11021713  T
Q  629 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacg 728  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||| |||||||||||||| |    
T  11021714 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcaatttgaatttcgaatg 11021812  T
Q  729 tgtcttgaaaatatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagt 827  Q
    |||||||||||||| |||||  |||||||||||      || ||  ||| ||| ||| || |  |||| ||||||||||||||||||||| | ||  |||    
T  11021813 tgtcttgaaaatattcgttgttttgaccttatc------ca-aaagaaactgctcttcgagagttttccgtctgtcgaaccgaaacacacacctttgagt 11021905  T
Q  828 gtcttcagcaagtccaacttcgataggaatgaaaag-acaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaata 925  Q
     |||  |||||| ||||||||||||   | |||||| |||| | ||||||| | ||||||| |||| |||||||||||| ||||||| || |||||||||    
T  11021906 atctctagcaagcccaacttcgataatga-gaaaagaacaaatccttcgattacaaggtcaacctactttgactgcatttaatgataccctttaaaaata 11022004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 537 - 743
Target Start/End: Original strand, 24876399 - 24876605
Alignment:
Q  537 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatt 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  24876399 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccctttttttcctagggaaaactactatt 24876498  T
Q  637 tatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttga 736  Q
    |||||||||||| | | || ||||||||||||||| ||| ||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  24876499 tatacaaatagataaagcttcctagatttgaatttgaaattataactgtagaaaactaactatacttatccattcgatttgaatttcgaatgtgtcttga 24876598  T
Q  737 aaatatc 743  Q
    |||||||    
T  24876599 aaatatc 24876605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 356 - 760
Target Start/End: Complemental strand, 18752926 - 18752532
Alignment:
Q  356 aaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcgg-tgtaaataaccataaatgaattgttcaaaagaaacaagtaa 454  Q
    ||||||||  ||||||||  |||||||||||||||||||||||  ||||||||||  | || ||||||   ||||||||||  |||||||||||||||||    
T  18752926 aaataaaattaagtaaaaggcaatcgaattcaacccagttgaatccaatcgaaatatgatgcaaataaaagtaaatgaattactcaaaagaaacaagtaa 18752827  T
Q  455 attgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttc 554  Q
    ||||       |||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||  |||||||||| ||||||||||||| ||||    
T  18752826 attg-------caaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttggtacacagattcatacattgcaacttgtgactcatttc 18752734  T
Q  555 tctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataac 654  Q
    ||  |||||| ||||||||||||| |||||  ||||||||||||||||||| |||||||||| ||||   |||| |||||||||||||||||||||||||    
T  18752733 tcgattccatacggataatttgagcgtaag--ttttgtatgattgaattgtgaccctttttt-cctaaaaaaaattactatttatacaaatagaaataac 18752637  T
Q  655 tgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaatatccgttg---ctt 751  Q
    || ||||||||||    |||||||||| ||||| ||||||||||  |||| |||| ||||||||||||| ||||| | | ||| ||||||||||   |||    
T  18752636 tgtctagatttga----aaaactataactgcagaaaactaactaatcttagccatacgatttgaatttcaaacgtatatcgaacatatccgttggcactt 18752541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 633 - 929
Target Start/End: Original strand, 13346726 - 13347023
Alignment:
Q  633 tatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtc 732  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  13346726 tatttatacaaatagaaataactatctagatttgaatttaaaactataactgcaggaaactaacaatacttatccattcgatttgaatttcgaatgtgtc 13346825  T
Q  733 ttgaaaatatccgttgcttgaccttatctgaattcacaacaaaaatgccctttgataactttct-gtctgtcgaaccgaaacacacgctttcaagtgtct 831  Q
    ||| ||||||  ||| |||||| ||||| |||  |||||||||| |||||||  |||||||| | | | ||| |||  |||||| ||||||| ||  | |    
T  13346826 ttggaaatatttgttacttgactttatccgaac-cacaacaaaactgcccttcaataacttttttgcccgtcaaactaaaacacgcgctttcgagcattt 13346924  T
Q  832 tcagcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatattgg 929  Q
    ||||||||||||||||||||| |||||| || |||||||||||||||| |||||||  |||||||||||||||||||||||| || |||||||||||||    
T  13346925 tcagcaagtccaacttcgataagaatgagaaaacaatttcttcgatgacaaggtcaatctattttgactgcattaaatgatagcctttaaaaatattgg 13347023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 242 - 565
Target Start/End: Complemental strand, 10864501 - 10864186
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatttaatgttattct 341  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||| | || ||||    
T  10864501 gtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgttatcttcgagaaatttattattgttct 10864402  T
Q  342 tgaagcatcttgataaataaaagaaagtaaaaaa-caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataacca--taaa-tgaattgt 437  Q
    ||||| | |||||| ||   ||||| |||||||| ||||||||||||||| |||||||  |||||||  |  |   ||| |  ||  |||  |||||||     
T  10864401 tgaagaa-cttgatgaa---aagaa-gtaaaaaagcaatcgaattcaacctagttgaatccaatcgagttaagcaaaaaaatacacgtaatgtgaattgc 10864307  T
Q  438 tcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattac 537  Q
    |||||||||||||||||||||||       | |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||| |    
T  10864306 tcaaaagaaacaagtaaattgta-------aggacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattcatacattgc 10864214  T
Q  538 aacttgtgactcgtttctctcttccatg 565  Q
    ||||||||||||||||||||||||||||    
T  10864213 aacttgtgactcgtttctctcttccatg 10864186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 623 - 929
Target Start/End: Complemental strand, 10864184 - 10863885
Alignment:
Q  623 ggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaattt 722  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||| | |||||||||||||| ||||||||    
T  10864184 ggaaaactactatttatacaaatagaaataactgtctagatttgaatttaaaactataactgcagt-aactaacaaaacttatccattcgaattgaattt 10864086  T
Q  723 cgaacgtgtcttgaaaatatccgttg-cttgaccttatctgaattcacaaca-aaaatgccctttgataactttctgtctgtcgaaccgaaacacacgct 820  Q
    | || ||||||||||||||| |||||  |||||||||||        ||| | ||| ||| ||| || |  |||| ||||||||||||| ||||| | |     
T  10864085 caaatgtgtcttgaaaatattcgttgttttgaccttatc--------caatagaaactgctcttcgagagttttccgtctgtcgaaccg-aacacgcacc 10863995  T
Q  821 ttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-tta 919  Q
    ||| ||| ||| ||||||| ||||||||||||   || |||  |||||| ||||||| | ||||||| |||| ||||||| |||| ||||||| || |||    
T  10863994 ttcgagtatctccagcaagcccaacttcgataatgataaaagaacaattccttcgattacaaggtcaacctactttgactacatttaatgatacccatta 10863895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 462 - 644
Target Start/End: Original strand, 11989354 - 11989536
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| ||||| |||||  |  ||||| |||| ||||||||||| |||||| |||||||||| || ||||    
T  11989354 attgcaaagacatttaaagaaatgtattgaaattgcattgactgaataaaggttggtgcacacgttcatacattgcaacttatgactcgtttgtcgcttc 11989453  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||||| | |||||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||||||||||    
T  11989454 catacggatagtattgagtgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaa 11989536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 10827541 - 10827628
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatt 329  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  10827541 gtaaacaaccgctagtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgttatcttccagaaatt 10827628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 11021333 - 11021420
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatt 329  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  11021333 gtaaacaaccgctagtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgttatcttccagaaatt 11021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 462 - 641
Target Start/End: Original strand, 41239182 - 41239358
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||| || ||||||  |||| ||| ||||||| ||||||| ||||||||||||||||||  ||||||||||   |||||| ||||||||||||| |     
T  41239182 attgcaatgaaatttaaagaaataaacgtaaattgcattgattaaatgtaaattggtacacagattcatacattgtgacttgttactcgtttctctc-tg 41239280  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
     || |||||| |||||| ||||||||| |||||||||||||||| ||||||||||  ||| | ||||||| |||||||||    
T  41239281 aatccggatagtttgagcgtaagttttatgtatgattgaattgtgaccctttttt--ctatgaaaaactagtatttatac 41239358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 514 - 648
Target Start/End: Original strand, 1978229 - 1978363
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||||||||||| || ||||||||||||||||| || ||| ||| |||| ||| |||||||||| ||||  ||||||||||||||| ||||      
T  1978229 ttggtacacatgttcatactttgcaacttgtgactcgtttgtcgctttcatacggacaatattgagtgtaaattttgagtatgattgaattgtgaccc-g 1978327  T
Q  613 ttttccctagggaaaactactatttatacaaataga 648  Q
    ||||||||| | ||||||||||||||||||||||||    
T  1978328 ttttccctaagaaaaactactatttatacaaataga 1978363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 514 - 648
Target Start/End: Complemental strand, 15758685 - 15758551
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||||||||||| || ||||||||||||||||| || ||||||| |||| ||| |||||||||||||||  ||||||||||||||| | |||     
T  15758685 ttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtga-cctc 15758587  T
Q  613 ttttccctagggaaaactactatttatacaaataga 648  Q
    |||| |||| | |||||||||||||||||| |||||    
T  15758586 tttttcctaagaaaaactactatttatacagataga 15758551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 506 - 647
Target Start/End: Original strand, 14345900 - 14346041
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||    
T  14345900 aatgaaaattggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 14345999  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||||||||| |||| | |||||||||||||||||| ||||    
T  14346000 tgaccctttttt-cctaagaaaaactactatttatacagatag 14346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 473 - 618
Target Start/End: Original strand, 10478160 - 10478304
Alignment:
Q  473 atttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataa 572  Q
    |||||||||||  ||||||||||| | | ||||||||||||||||||||||  ||||||||||   |||||| ||||||||||||| |  ||| |||||     
T  10478160 atttaagaaaacaaacttaaattgcactaattgaatgtaaattggtacacagattcatacattttgacttgtaactcgtttctctc-taaatgtggatag 10478258  T
Q  573 tttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
    |||||||||||||||| |||||| ||||||||| |||| |||||||    
T  10478259 tttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc 10478304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 14035878 - 14036011
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||| ||||||    
T  14035878 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgaccctt 14035977  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  14035978 tttt-cctaagaaaaactactatttatacagatag 14036011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 481 - 641
Target Start/End: Complemental strand, 18450938 - 18450780
Alignment:
Q  481 aaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtg 580  Q
    |||| ||| ||||||| |||||||||||||| |||||||||||  |||||||||||  |||||| ||||||||||||| |  ||||| ||| ||| ||||    
T  18450938 aaataaacataaattgcattgattgaatgtacattggtacacaaattcatacattatgacttgttactcgtttctctc-taaatgcgaatagtttaagtg 18450840  T
Q  581 taagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    |||||||| |||||| ||||||||| |||  |||||||| | || |||||| |||||||||    
T  18450839 taagttttctgtatggttgaattgtgacctgtttttccc-atgggaaactaatatttatac 18450780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 14323715 - 14323848
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||| ||| |||||||||| |||| ||||||    
T  14323715 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgagttgtgaccctt 14323814  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  14323815 tttt-cctaagaaaaactactatttatacagatag 14323848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 18115234 - 18115366
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | ||||||||||| |||| ||||||||||||||| ||||||    
T  18115234 ttggtacacatattcatactttgcaacttgtaactcgtttgtcacttccatacggacagtattgagtgtaag-ttttagtatgattgaattgtgaccctt 18115332  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  18115333 tttt-cctaagaaaaactactatttatacagatag 18115366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 18141802 - 18141934
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | ||||||||||| |||| ||||||||||||||| ||||||    
T  18141802 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaag-ttttagtatgattgaattgtgaccctt 18141900  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  18141901 tttt-cctaagaaaaactactatttatacagatag 18141934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 44277677 - 44277810
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| |||||| |||||||| |||| |    
T  44277677 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgacccat 44277776  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    ||||  ||| | |||||||||||||||||| ||||    
T  44277777 tttt-tctaagaaaaactactatttatacagatag 44277810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 486 - 615
Target Start/End: Original strand, 16713255 - 16713383
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt 585  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||||||||    |||| | ||||||||||||| |  |||| |||| |||||||||| ||    
T  16713255 aacttaaattgcataaattgaatgtaaattggtacacatattcatacatcgtgacttattactcgtttctctc-tgaatgcagatagtttgagtgtacgt 16713353  T
Q  586 tttttgtatgattgaattgttacccttttt 615  Q
    ||| |||||||||||||||| |||||||||    
T  16713354 tttctgtatgattgaattgtgacccttttt 16713383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 486 - 615
Target Start/End: Original strand, 17687491 - 17687619
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt 585  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||||||||    |||| | ||||||||||||| |  |||| |||| |||||||||| ||    
T  17687491 aacttaaattgcataaattgaatgtaaattggtacacatattcatacatcgtgacttattactcgtttctctc-tgaatgcagatagtttgagtgtacgt 17687589  T
Q  586 tttttgtatgattgaattgttacccttttt 615  Q
    ||| |||||||||||||||| |||||||||    
T  17687590 tttctgtatgattgaattgtgacccttttt 17687619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 514 - 642
Target Start/End: Original strand, 18174872 - 18175000
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||  ||  |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  18174872 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgctctcacacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgt 18174971  T
Q  613 ttttccctagggaaaactactatttataca 642  Q
    |||| |||| | ||||||||||||||||||    
T  18174972 tttt-cctaagaaaaactactatttataca 18175000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 514 - 605
Target Start/End: Original strand, 18160102 - 18160194
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgt 605  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| |||||||||||||||    
T  18160102 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgt 18160194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 10477970 - 10478027
Alignment:
Q  272 ttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaatt 329  Q
    ||||||||||||  || |||||||  ||||||||||||||||||||||||||||||||    
T  10477970 ttgcaagatcaaatagcaaatctttgggacatattgtgtttgttatttttcagaaatt 10478027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 11989133 - 11989200
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||||| |||| |||| ||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  11989133 gtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 11989200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 1977967 - 1978044
Alignment:
Q  242 gtaaacaaccgctagtttaaaa-atatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| ||||||||| ||| || |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  1977967 gtaaacaatcgctagtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 1978044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 16713024 - 16713107
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    |||||||| |||| ||||||||||| ||| |||||||||||| ||||||||| |  || |||||||| ||||||||||| ||||||    
T  16713024 gtaaacaatcgctggtttaaaaatagttacttgcaagatcaaccagtaaatc-tcggggcatattgt-tttgttattttccagaaa 16713107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 17687260 - 17687343
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    |||||||| |||| ||||||||||| ||| |||||||||||| ||||||||| |  || |||||||| ||||||||||| ||||||    
T  17687260 gtaaacaatcgctggtttaaaaatagttacttgcaagatcaaccagtaaatc-tcggggcatattgt-tttgttattttccagaaa 17687343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 36282505 - 36282450
Alignment:
Q  126 gctcaatcgctcctttctttatatatggtccaatccaatagcccattaatccactt 181  Q
    ||||||||| | ||||||| |||| ||| |||||||||||||||||||| ||||||    
T  36282505 gctcaatcgatactttcttcatatttggcccaatccaatagcccattaacccactt 36282450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 242 - 927
Target Start/End: Complemental strand, 36723 - 36039
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattc 340  Q
    ||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||  |||||    
T  36723 gtaaaaaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgttttgttatttttcagaaacttaatactattc 36624  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaa----caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaatgaattg 436  Q
    |||||| | |||||| ||||||| ||||||| |||    |||||||||||||||||||||||  |||||||||||||||||||||||   ||||||||||    
T  36623 ttgaagaa-cttgatgaataaaataaagtaagaaaaaagcaatcgaattcaacccagttgaatccaatcgaaatcggtgtaaataactggaaatgaattg 36525  T
Q  437 ttcaaaagaaacaagtaaattgtagattgcaaagacattt-aagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacatt 535  Q
     ||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||| ||||||  ||||||| ||||||||||||||||||||||    
T  36524 ctcaaatgaaacaagtaaattgtaaattgcaaagacattttaagtaaatgaacttgaattgaattgatcaaatgtaagttggtacacatgttcatacatt 36425  T
Q  536 acaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactat 635  Q
     ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||| |||| |||| || || |||||||| || ||||||||||||    
T  36424 gcaacttgtgactcgtttctctcttccatgcgaataattagagtgaaagtattttgtattattggattg-tagccctttttccccagcgaaaactactat 36326  T
Q  636 ttatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttg 735  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||  |||||||    
T  36325 ttatgcaaatattaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcgatttgaatttcgaatatgtcttg 36227  T
Q  736 aaaatatccgttg-cttgaccttatctgaattcacaacaaaaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttca 834  Q
    ||| |||||||||  |||||||||||      || || |||| ||||||| || |  |||| |||||||||||||| |||| | | ||||||| ||| ||    
T  36226 aaattatccgttgttttgaccttatc------caaaagaaaactgcccttcgagagttttccgtctgtcgaaccgagacacgcaccttcaagtatctcca 36133  T
Q  835 gcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttgactgcattaaatgataacc-ttaaaaatatt 927  Q
    ||||| |||||||||||| | || |||  |||||| ||||||| | ||| ||| |||| |||||||||||||||||||| || |||||||||||    
T  36132 gcaagcccaacttcgataaggataaaagaacaattccttcgattacaagatcaacctactttgactgcattaaatgatagcctttaaaaatatt 36039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 242 - 741
Target Start/End: Complemental strand, 71027 - 70533
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattt-aatgtta-tt 339  Q
    |||||||| ||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||| | |||| ||   ||||||| ||| ||  ||    
T  71027 gtaaacaatcgctagtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggatatattgtgtctattatcttctggaaattttaatatttgtt 70928  T
Q  340 cttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaa-atcggtgtaaataaccataaatgaattgtt 438  Q
    ||||||| | |||||||||   ||  ||| ||||| |||||||||||||||||||||||  |||||||| | |||| |||||||   ||||||||||| |    
T  70927 cttgaagaa-cttgataaaacgaaataagaaaaaagcaatcgaattcaacccagttgaatccaatcgaagaccggtataaataaaagtaaatgaattgct 70829  T
Q  439 caaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattaca 538  Q
    ||||||| ||||| ||  ||||       ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||    
T  70828 caaaagagacaagaaagctgta-------aagacatttaagaaaatgaacttaaattgcattgactgaatgtaaattggtaaacatgttcatacattgca 70736  T
Q  539 acttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactattta 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||  ||||||||| ||||||||||||||||    
T  70735 acttgtgactcgtttctctcttccatgcggataatttgagtgtaagtattttgtatgattgaattgtgatcc-gttttccctatggaaaactactattta 70637  T
Q  639 tacaaatagaaataactgcctagatttgaa-tttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaa 737  Q
    |||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||| | | |||| |||||| |||||| |||||| |||| ||||     
T  70636 tacaaatagaaataactgcctagattcgaattttaaaactataaccgcaataacttaacaaaagttattcattcgttttgaaattcgaatgtgttttgag 70537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 172; Significance: 6e-92; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 242 - 719
Target Start/End: Complemental strand, 9372 - 8903
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttc-agaaattt-aatgtta-t 338  Q
    |||||||| |||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||||| | ||  | ||| |||||||| ||| ||  |    
T  9372 gtaaacaatcgctggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtgtctatttatcttctagaaatttgaatatttgt 9273  T
Q  339 tcttgaagcatcttgataaataaaagaaagtaaaaaacaatcgaattcaacccagttgaactcaatcgaa-atcggtgtaaataaccataaatgaattgt 437  Q
    |||||||| | |||||||||   ||  ||| ||||| ||||| ||||||||| |||||||  |||||||| | || | |||||||   | |||||||||     
T  9272 tcttgaagaa-cttgataaaacgaaataag-aaaaagcaatcaaattcaacctagttgaatccaatcgaagaccgatataaataaaagtgaatgaattgc 9175  T
Q  438 tcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattac 537  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |    
T  9174 tcaaaagaaacaagtaaattg-------caaagacatttaagaaaatgaacttaaattgcattgattgaatgtagattggtacacatattcatacattgc 9082  T
Q  538 aacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactattt 637  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || | ||||||| || |  ||||||||||||    
T  9081 aacttgtgacttgtttctctcttccatgcggataatttgaatgtaagt-ttttgtatgattgaattgtgactc-tttttccttaagagaaactactattt 8984  T
Q  638 atacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaa 719  Q
    |||||||||||||||||||||||||||||  | ||||||||||| ||||  ||||||||||  |||| ||||  ||||||||    
T  8983 atacaaatagaaataactgcctagatttg-gtctaaaactataactgcataaaactaactaatcttagccatatgatttgaa 8903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 166; Significance: 2e-88; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 242 - 760
Target Start/End: Original strand, 249829 - 250337
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgttt-gttatttttcagaaatttaatgttattc 340  Q
    |||||||||||||  |||||||||  ||| |||||||||||| ||||||||||||||||||||||||| || ||| |||  || ||| | | | |  |||    
T  249829 gtaaacaaccgctgatttaaaaattgttacttgcaagatcaaccagtaaatcttaaggacatattgtgcttcgttgtttcccataaagtgattatcgttc 249928  T
Q  341 ttgaagcatcttgataaataaaagaaagtaaaaaa--caatcgaattcaacccagttgaactcaatcgaaatcggtgtaaataaccataaa-tgaattgt 437  Q
    |||||  ||     ||| ||||   ||||||| ||  ||||| ||||||||| |||||||||||||||||||  || ||| ||||  |||| | ||||||    
T  249929 ttgaaaaat-----taagtaaacagaagtaaataaagcaatcaaattcaaccaagttgaactcaatcgaaatttgt-taagtaacagtaaaataaattgt 250022  T
Q  438 tcaaaagaaacaagtaaattgtagattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattac 537  Q
    |||||||||||||||||| ||||       ||| || |||||||||| |||||||| |||||||||||||||||||||||||||||  |||||||||| |    
T  250023 tcaaaagaaacaagtaaaatgta-------aaggcacttaagaaaataaacttaaaatgtattgattgaatgtaaattggtacacaaattcatacattgc 250115  T
Q  538 aacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactattt 637  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||| |||||||||| ||||| | ||  |||||| | || |||||||||||||    
T  250116 aacttgtgactcgtttctcgcttccatatggataatttgagtgtaagttttgtgtatgattggattgtga-ccacttttccttgggaaaaactactattt 250214  T
Q  638 atacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaa 737  Q
    ||||||||  |||||||| |||||||| ||||| ||| |||||| |||||||||||||| |  |||||||||||||||||||||||||| | | |||| |    
T  250215 atacaaatcaaaataactacctagattcgaattcaaacctataactgcagtaaactaacaagtcttatccattcgatttgaatttcgaatgcgccttgga 250314  T
Q  738 aatatccgttgcttgaccttatc 760  Q
    ||||||| ||| |||||||||||    
T  250315 aatatccattgtttgaccttatc 250337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 141; Significance: 2e-73; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 366 - 729
Target Start/End: Complemental strand, 7689 - 7337
Alignment:
Q  366 aagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcgg-tgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagatt 464  Q
    ||||||||| |||||||||||||||||||| ||  ||||| || |  | || ||||||   ||||||||||  |||||||||||||||||||||||        
T  7689 aagtaaaaagcaatcgaattcaacccagtttaatccaatcaaagtttgatgcaaataaaagtaaatgaattactcaaaagaaacaagtaaattgta---- 7594  T
Q  465 gcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccat 564  Q
       |||||||||||||||||||||||||| || |||||||||||||| ||| ||||  |   ||||||||| |||| |||||||||||| ||||||||||    
T  7593 ---aagacatttaagaaaatgaacttaaaatgcattgattgaatgtagattcgtacttac--tcatacattgcaacatgtgactcgtttatctcttccat 7499  T
Q  565 gcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctagatt 664  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||| || || || |   ||| ||||||||||||||||||||||||||||||||||    
T  7498 gcggataatttgagtgtaagtttt--gtatgattgaattgcgacccttatt-ccttaagaggaacaactatttatacaaatagaaataactgcctagatt 7402  T
Q  665 tgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgt 729  Q
    ||| || |||||||||||||||| ||||||||||  |||| |||||||||||||||||| |||||    
T  7401 tgatttgaaaactataattgcagaaaactaactaatcttagccattcgatttgaatttcaaacgt 7337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 134; Significance: 3e-69; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 486 - 723
Target Start/End: Original strand, 101987 - 102221
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt 585  Q
    |||||||| || |||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||     
T  101987 aacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaag- 102085  T
Q  586 tttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgc 685  Q
    |||||||||||||||||||| |||| ||||||| || |  |||||| ||||||||||||||||||||||||||||||||||  || |||||||||| |||    
T  102086 tttttgtatgattgaattgtgaccc-tttttccttaagagaaactattatttatacaaatagaaataactgcctagatttg-gttaaaaactataactgc 102183  T
Q  686 agtaaactaactatacttatccattcgatttgaatttc 723  Q
    || ||||||||||  |||| ||||| ||||||||||||    
T  102184 agaaaactaactaatcttagccatttgatttgaatttc 102221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 370 - 455
Target Start/End: Original strand, 101901 - 101987
Alignment:
Q  370 aaaaaacaatcgaattcaacccagttgaactcaatcgaa-atcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaa 455  Q
    ||||| |||||||||||||||||||||||  | |||||| | ||||||||||||   ||||||||||| ||||||||||||||||||    
T  101901 aaaaagcaatcgaattcaacccagttgaatccgatcgaagaccggtgtaaataaaagtaaatgaattgctcaaaagaaacaagtaaa 101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 101781 - 101849
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgt 310  Q
    |||||||| || | |||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||    
T  101781 gtaaacaatcgttggtttaaaaatgtttacttggaagatcaaccagtaaatcttaaggacatattgtgt 101849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 130; Significance: 7e-67; HSPs: 3)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 486 - 723
Target Start/End: Original strand, 3683 - 3917
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt 585  Q
    |||||||| || |||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||     
T  3683 aacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaag- 3781  T
Q  586 tttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataattgc 685  Q
    |||||||||||||||||||| |||| ||||| | || |  |||||| ||||||||||||||||||||||||||||||||||  || |||||||||| |||    
T  3782 tttttgtatgattgaattgtgaccc-tttttacttaagagaaactaatatttatacaaatagaaataactgcctagatttg-gttaaaaactataactgc 3879  T
Q  686 agtaaactaactatacttatccattcgatttgaatttc 723  Q
    || ||||||||||  |||| ||||| ||||||||||||    
T  3880 agaaaactaactaatcttagccatttgatttgaatttc 3917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 370 - 455
Target Start/End: Original strand, 3597 - 3683
Alignment:
Q  370 aaaaaacaatcgaattcaacccagttgaactcaatcgaa-atcggtgtaaataaccataaatgaattgttcaaaagaaacaagtaaa 455  Q
    ||||| |||||||||||||||||||||||  | |||||| | ||||||||||||   ||||||||||| ||||||||||||||||||    
T  3597 aaaaagcaatcgaattcaacccagttgaatccgatcgaagaccggtgtaaataaaagtaaatgaattgctcaaaagaaacaagtaaa 3683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 3477 - 3545
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgt 310  Q
    |||||||| || | |||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||    
T  3477 gtaaacaatcgttggtttaaaaatgtttacttggaagatcaaccagtaaatcttaaggacatattgtgt 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 125; Significance: 7e-64; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 366 - 748
Target Start/End: Complemental strand, 200384 - 200014
Alignment:
Q  366 aagtaaaaaacaatcgaattcaacccagttgaactcaatcgaaatcgg-tgtaaataaccataaatgaattgttcaaaagaaacaagtaaattgtagatt 464  Q
    ||||||||  ||||||||||||||| |||||||  ||||| || |  | || ||||||   ||||||||||  |||||||||||||||||||||          
T  200384 aagtaaaaggcaatcgaattcaacctagttgaatccaatcaaagtatgatgcaaataaaagtaaatgaattactcaaaagaaacaagtaaattg------ 200291  T
Q  465 gcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccat 564  Q
     ||||||| |||||  |||||||||||||||| |||||| |||| ||| ||||||||||  |||||||||| ||||||||||||| |||||| |||||||    
T  200290 -caaagacgtttaaagaaatgaacttaaattgcattgatcgaatataagttggtacacagattcatacattgcaacttgtgactcatttctcgcttccat 200192  T
Q  565 gcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgcctagatt 664  Q
      ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| | ||||| |||||||||||||||||||||||||| |||||||    
T  200191 aaggataatttgagtgtaagt-ttttgtatgattgaattgtgaccctttttt-cctaagaaaaacaactatttatacaaatagaaataactgtctagatt 200094  T
Q  665 tgaatttaaaactataattgcagtaaactaactatacttatccattcgatttgaatttcgaacgtgtcttgaaaatatccgttg 748  Q
     ||    |||||||||| ||||| ||||||||||  ||||  ||| ||||||||||||  ||||| | | ||| ||||||||||    
T  200093 gga----aaaactataactgcagaaaactaactaatcttagtcatacgatttgaatttaaaacgtatatcgaacatatccgttg 200014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 115; Significance: 7e-58; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 462 - 660
Target Start/End: Original strand, 8739 - 8936
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||     
T  8739 attgcaaagacatttaagagaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgtttctctcttg 8838  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatagaaataactgccta 660  Q
     ||| ||||| |||||||||||||||| |||||||||| ||||| ||||  |||||| || ||||||||||||||||||| |  |||||||||| ||||    
T  8839 aatgtggatagtttgagtgtaagttttgtgtatgattggattgtgaccc-gttttccttatggaaaactactatttatactagaagaaataactaccta 8936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 2433 - 2522
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaattta 331  Q
    ||||||||||||| |||||||| || ||  |||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  2433 gtaaacaaccgctggtttaaaattaattgcttgcaagatcaaccagtaaatcttaaagacaaattgtgtttgttattttccagaaattta 2522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 109; Significance: 3e-54; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 462 - 717
Target Start/End: Original strand, 68066 - 68321
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||   |||||||||||||||| ||||| ||||||||| || |||||||  |||||||||| ||||||||||||||||| || ||||    
T  68066 attgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttagtacacagattcatacattgcaacttgtgactcgtttatcgcttc 68165  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga-aataactgccta 660  Q
    |||  ||||| |||||| |||||||||| ||||||||||||||| || ||||||| |||| | |||||||||||||||||||||||| ||||||| ||||    
T  68166 cataaggatagtttgagcgtaagtttttagtatgattgaattgtgactctttttt-cctaagaaaaactactatttatacaaatagagaataactaccta 68264  T
Q  661 gatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttg 717  Q
    | ||  |||||||||||||||  |||| |||||| |||  |||| |||| |||||||    
T  68265 gtttgaaatttaaaactataaccgcagaaaactacctaatcttagccatacgatttg 68321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 462 - 717
Target Start/End: Original strand, 76171 - 76426
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||   |||||||||||||||| |||||  ||||||||  | |||||||  |||||||||| ||||||||||||||||| || ||||    
T  76171 attgcaaagacatttagagaaatgaacttaaattgcattgacagaatgtaagatagtacacagattcatacattgcaacttgtgactcgtttatcgcttc 76270  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga-aataactgccta 660  Q
    |||  ||||| |||||| |||||||||| ||||||||||||||| || ||||||| |||| | |||||||||||||||||||||||| ||||||| ||||    
T  76271 cataaggatagtttgagcgtaagtttttagtatgattgaattgtgactctttttt-cctaagaaaaactactatttatacaaatagagaataactaccta 76369  T
Q  661 gatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttg 717  Q
    | ||  |||||||||||||||  |||| |||||| |||  |||| |||| |||||||    
T  76370 gtttgaaatttaaaactataaccgcagaaaactacctaatcttagccatacgatttg 76426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 105; Significance: 6e-52; HSPs: 6)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 462 - 717
Target Start/End: Complemental strand, 107591 - 107335
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  |||||||||||||||| |||||  |||||||| ||||||||||  |||||||||| ||||||||||||||||| || ||||    
T  107591 attgcaaagacatttaaagaaatgaacttaaattgcattgacggaatgtaagttggtacacagattcatacattgcaacttgtgactcgtttatcgcttc 107492  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga-aataactgccta 660  Q
    |||  ||||| | |||| |||||||||| ||||||||||||||| ||| ||||||||  ||  |||| ||||||||||||||||||| ||||||| ||||    
T  107491 cataaggatagtctgagcgtaagtttttagtatgattgaattgtgacctttttttcctaagaaaaaaatactatttatacaaatagagaataactaccta 107392  T
Q  661 gatttgaatttaaaactataattgcagtaaactaactatacttatccattcgatttg 717  Q
    | ||  |||||||||||||||  |||| |||||| |||  |||| |||| |||||||    
T  107391 gtttgaaatttaaaactataaccgcagaaaactacctaatcttagccatacgatttg 107335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 462 - 674
Target Start/End: Complemental strand, 129335 - 129123
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||||||||   |||||||||||||||| ||||| ||||||||| ||| ||||||  |||||||||| ||||||||||||||||| || ||||    
T  129335 attgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttgttacacagattcatacattgcaacttgtgactcgtttatcgcttc 129236  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaataga-aataactgccta 660  Q
    |||  ||||| |||||| |||| ||||| ||||||||||||||| |||||||||| |||| | |||||||||||||||||||||| | ||||||| ||||    
T  129235 cataaggatagtttgagcgtaaatttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaataaagaataactaccta 129137  T
Q  661 gatttgaatttaaa 674  Q
    | ||  ||||||||    
T  129136 gtttgaaatttaaa 129123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 129948 - 129875
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacatt 535  Q
    ||||||||||||||||   |||||||||||||||| ||||| ||||||||| ||| || |||  ||||||||||    
T  129948 attgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttgatatacaaattcatacatt 129875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 144779 - 144706
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacatt 535  Q
    ||||||||||||||||   |||||||||||||||| ||||| ||||||||| ||| || |||  ||||||||||    
T  144779 attgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttgatatacagattcatacatt 144706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 144999 - 144932
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||||| |||| |||| ||||| || | |||||||||||| ||||||||||||||  |||||||||    
T  144999 gtaaacaatcgctggtttcaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtg 144932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 462 - 512
Target Start/End: Complemental strand, 136066 - 136016
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaa 512  Q
    ||||||||||||||||   |||||||||||||||| ||||| |||||||||    
T  136066 attgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaa 136016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 1470 - 1267
Alignment:
Q  464 tgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttcca 563  Q
    |||||||| ||||| |||||  |||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  1470 tgcaaagatattta-gaaaaaaaacttaaactgcattgattgaatgtaaattggtacacatgatcatacattgcaacttgtgactcgtttctctcttcca 1372  T
Q  564 tgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctaggga-aaactactatttatacaaatagaaataactgcctaga 662  Q
    |||| |||||||||||||||||||| |||||||||| ||||| |||    ||||||| | || |||||||||||| ||| ||||||||||||| |||| |    
T  1371 tgcgaataatttgagtgtaagttttgtgtatgattggattgtaacc--actttcccttgagagaaactactatttttactaatagaaataactacctata 1274  T
Q  663 tttgaat 669  Q
    |||||||    
T  1273 tttgaat 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 1674 - 1585
Alignment:
Q  243 taaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg-tttgttatttttcagaaattta 331  Q
    ||||||| || | |||||||| || | | |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  1674 taaacaatcgttggtttaaaattaatcacttgcaagatcaaccagtaaatcttaaggacatattgtgctttgttattttccagaaattta 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 45191 - 45376
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| ||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||  | ||||    
T  45191 attgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcacatattcatacattgcaacttgtgactcgtttgccgcttc 45290  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||| ||| ||||| |||||||||| ||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||    
T  45291 catacggacaatattgagcgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaatag 45376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 462 - 644
Target Start/End: Original strand, 33296 - 33477
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||| |||||||  ||||| | |||||||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||| || ||||    
T  33296 attgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatgtaagttggtacacatattcatacattccaacttgtgactcgtttatcgcttc 33395  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    |||  ||||| |||||| |||||||||| ||||||||||||||| |||| ||||| |||| | ||||||||||||||||||||    
T  33396 catatggatagtttgagcgtaagtttttagtatgattgaattgtgacccgttttt-cctaagaaaaactactatttatacaaa 33477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 83; Significance: 8e-39; HSPs: 4)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 16951 - 17136
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| || ||||    
T  16951 attgcaaagacatttaaagaaatgtagtgaaattgcattgattgaatgtaagttggtgcacatgttcatacattgcaacttgtgactcgtttgtcgcttc 17050  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| || | ||| ||||| | |||||||| ||||||||||||||| ||||||||||  ||| | ||||||||| |||||||||||||    
T  17051 catacgaacaatattgagcgcaagtttttagtatgattgaattgtgaccctttttt-tctaagaaaaactactctttatacaaatag 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 506 - 617
Target Start/End: Complemental strand, 5674 - 5564
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgt 605  Q
    ||||||||||||||||||  ||  ||||||   |||||| |||| |||||||||   ||||||||| |||||||||||||||| | ||||||||||||||    
T  5674 aatgtaaattggtacacagattactacattgtgacttgttactcatttctctctga-atgcggatagtttgagtgtaagttttctatatgattgaattgt 5576  T
Q  606 tacccttttttc 617  Q
     |||| ||||||    
T  5575 gacccgtttttc 5564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 327 - 250
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    ||||||||||||| || |||||||| ||| |||||||||||| ||| ||||||||  | ||||||||||||||||||||    
T  327 gtaaacaaccgctggtctaaaaatagttacttgcaagatcaaccagaaaatcttatag-catattgtgtttgttatttt 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 506 - 588
Target Start/End: Complemental strand, 84 - 3
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagtttt 588  Q
    ||||||||||||||||||  ||| ||||||   |||||| |||| |||||||||   ||||||||| ||||||||||||||||    
T  84 aatgtaaattggtacacagattcctacattgtgacttgttactcatttctctctga-atgcggatagtttgagtgtaagtttt 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 75; Significance: 5e-34; HSPs: 8)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 6614 - 6799
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||  |||||  ||||| | | ||||||||| || | |||| |||||||| ||||||||||||| || ||||||||||||||||| || ||||    
T  6614 attgcaaagatgtttaaagaaatgtattgaaattgtatagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttc 6713  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||| | | |||||||||||||||||||||||||||||||| | || ||||| |||| | |||||||||||||||||||||||    
T  6714 catacggacagtattgagtgtaagttttttgtatgattgaattgtgatcccttttt-cctaagaaaaactactatttatacaaatag 6799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 62275 - 62133
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || |||||||||| |||||| || ||||||| |||| ||| |||||||||||||||| ||||||||||||||    
T  62275 aatgaaaattggtgcacatattcatactttgcaacttgtgattcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattg 62176  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||||||||||||||||||||||    
T  62175 tgacccgttttt-cctaagaaaaactactatttatacaaataga 62133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 71453 - 71311
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || |||||||||| |||||| || ||||||| |||| ||| |||||||||||||||| ||||||||||||||    
T  71453 aatgaaaattggtgcacatattcatactttgcaacttgtgattcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattg 71354  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||||||||||||||||||||||    
T  71353 tgacccgttttt-cctaagaaaaactactatttatacaaataga 71311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 85136 - 84994
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | ||||||||||||| || ||||||||||||||    
T  85136 aatggaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttcttagtatgattgaattg 85037  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||||||||||||||||||||||    
T  85036 tgacccgttttt-cctaagaaaaactactatttatacaaataga 84994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 506 - 647
Target Start/End: Complemental strand, 22749 - 22608
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||||||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||| |||||     
T  22749 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgatcgaatta 22650  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||| ||||| |||| | |||||||||||||| ||||||||    
T  22649 tgacccgttttt-cctaagaaaaactactatttacacaaatag 22608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 462 - 586
Target Start/End: Complemental strand, 116580 - 116456
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||||||||||  ||||| | | |||||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||  || ||||    
T  116580 attgcaaagacatttaaagaaatgtattgaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgttcatcgcttc 116481  T
Q  562 catgcggataatttgagtgtaagtt 586  Q
    ||| | |||| |||||| |||||||    
T  116480 catacagatattttgagcgtaagtt 116456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 62548 - 62471
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| |||| |||| |||||| |||| |||||||||||| |||||||||||| |  |||||||||||| |||||    
T  62548 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgttttttatt 62471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 71726 - 71649
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| |||| |||| |||||| |||| |||||||||||| |||||||||||| |  |||||||||||| |||||    
T  71726 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgttttttatt 71649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 75; Significance: 5e-34; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 506 - 647
Target Start/End: Original strand, 151402 - 151543
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||||||||||| || ||||||||||||||||| || ||||||| |||||| | |||||||||||||||| ||||||||||||||    
T  151402 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattg 151501  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||| ||||| |||| | |||||||||||||||||||||||    
T  151502 tgaccccttttt-cctaagaaaaactactatttatacaaatag 151543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 579 - 647
Target Start/End: Original strand, 162035 - 162102
Alignment:
Q  579 tgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||||| ||||| |||||||| |||||| |||| ||||||| || | |||||||||||||||||||||||    
T  162035 tgtaattttttagtatgatttaattgtgacccctttttcc-taagaaaaactactatttatacaaatag 162102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 161747 - 161805
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccat 564  Q
    |||| |||||||| ||||||||||||| || ||||||||||||| ||| || |||||||    
T  161747 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcatttgtcgcttccat 161805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 491 - 647
Target Start/End: Complemental strand, 32221 - 32065
Alignment:
Q  491 aaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt 589  Q
    |||||| ||||| | |||| |||||||| ||||||||||||| || |||||| |||||||||| || ||||||| |||| ||| ||||||||||||||||    
T  32221 aaattgcattgacttaatgaaaattggtgcacatgttcatactttgcaacttttgactcgtttgtcgcttccatacggacaatattgagtgtaagttttt 32122  T
Q  590 tgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
     ||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||    
T  32121 agtatgattgaattgtgacccgttttt-cctaagaaaaactactatttatacaaatag 32065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 32452 - 32403
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    ||||||||||| |||||||||||| ||||||||||||||  |||||||||    
T  32452 aaaaatatttacttgcaagatcaaccagtaaatcttaagagcatattgtg 32403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 462 - 644
Target Start/End: Complemental strand, 11473 - 11291
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||| ||||||  ||||| | | |||||| |||||||||||| || |||||||||| |||||||| || ||||||||||||| ||| || ||||    
T  11473 attgcaaagatatttaaagaaatgtattaaaattgcattgattgaatgaaatttggtacacaggttcatactttgcaacttgtgactcatttgtcgcttc 11374  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||| | | ||||| |||||||||| ||||||||||||||| ||||| |||| ||||  |||||||||||||||||||||    
T  11373 catacggacagtattgagcgtaagtttttagtatgattgaattgtgaccctgtttt-cctaaagaaaactactatttatacaaa 11291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 462 - 644
Target Start/End: Original strand, 19928 - 20110
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||| |||||||  ||||| | | |||||| ||||||||||||||| ||||| ||  | |||||||||| ||||||||||||| ||| |  ||||    
T  19928 attgcaaaggcatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcatctattcatacattgcaacttgtgactcatttgtagcttc 20027  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||| ||| ||||| |||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||||||||||    
T  20028 catacggacaatattgagcgtaagtttttagtatgattgaattgtgaccctttttt-cctaagaaaaactactatttatacaaa 20110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 506 - 647
Target Start/End: Complemental strand, 30720 - 30579
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||||||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  30720 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 30621  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||| ||||| |||| | |||||||||||||||||||||||    
T  30620 tgacccgttttt-cctaagaaaaactactatttatacaaatag 30579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 30984 - 30916
Alignment:
Q  242 gtaaacaaccgctagttt-aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||||| |||| |||| |||||| ||||||||||||| ||| ||||||||||||||  |||||||||    
T  30984 gtaaacaatcgctggtttcaaaaatgtttatttgcaagaccaaccagtaaatcttaagagcatattgtg 30916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 514 - 647
Target Start/End: Complemental strand, 5754 - 5621
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| |||||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  5754 ttggtacacatattcatactttacaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccat 5655  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  5654 tttt-cctaagaaaaactactatttatacagatag 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 67; Significance: 3e-29; HSPs: 3)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 1177 - 1362
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||  |||||  ||||| | | |||||| ||||| | |||| |||||||| ||||||||||||| || ||||||||||||||||| || ||||    
T  1177 attgcaaagatgtttaaagaaatgtattgaaattgcattgacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttc 1276  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||| | | || ||||||||||||| ||||||||||||||| | ||| |||| |||| | |||||||||||||||||||||||    
T  1277 catacggacagtatttagtgtaagtttttagtatgattgaattgtga-cctgtttttcctaagaaaaactactatttatacaaatag 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 7605 - 7790
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    ||||||||||  |||||  ||||| | | |||||| ||||| | |||| |||||||| ||||||||||||| || ||||||||||||||||| || ||||    
T  7605 attgcaaagatgtttaaagaaatgtattgaaattgcattgacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttc 7704  T
Q  562 catgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    ||| |||| | | || ||||||||||||| ||||||||||||||| | ||| |||| |||| | |||||||||||||||||||||||    
T  7705 catacggacagtatttagtgtaagtttttagtatgattgaattgtga-cctgtttttcctaagaaaaactactatttatacaaatag 7790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 976 - 1025
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  976 aaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 506 - 646
Target Start/End: Complemental strand, 23157 - 23017
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  23157 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 23058  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaata 646  Q
    | |||| ||||| |||| | ||||||||||||||||||||||    
T  23057 tgacccgttttt-cctaagaaaaactactatttatacaaata 23017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 506 - 642
Target Start/End: Complemental strand, 44333 - 44197
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||  ||||||| || ||||||||||||||||| || ||| ||| |||| | | |||||||||||||||| ||||||||||||||    
T  44333 aatgaaaattggtgcacagattcatactttgcaacttgtgactcgtttgtcgctttcatacggacattattgagtgtaagtttttagtatgattgaattg 44234  T
Q  605 ttacccttttttccctagggaaaactactatttataca 642  Q
    | |||| ||||| |||| | ||||||||||||||||||    
T  44233 tgacccgttttt-cctaagaaaaactactatttataca 44197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 8760 - 8902
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  8760 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 8859  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | | ||| |||| |||| | ||||||||||||||||||||||||    
T  8860 tga-cctgtttttcctaagaaaaactactatttatacaaataga 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 8505 - 8554
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtg 309  Q
    |||||| |||| |||||||||||| ||||||||||||||  |||||||||    
T  8505 aaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 8554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 506 - 647
Target Start/End: Original strand, 5781 - 5922
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||  ||||||| || ||||||||||||||||| || ||||||| |||| ||  || ||||||||||||| ||||||||||||||    
T  5781 aatgaaaattggtgcacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaaaattaagtgtaagtttttagtatgattgaattg 5880  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||||||||| |||| | |||||||||||||||||||||||    
T  5881 tgaccctttttt-cctaagaaaaactactatttatacaaatag 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 63; Significance: 7e-27; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 50915 - 51048
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  50915 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccat 51014  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  51015 tttt-cctaagaaaaactactatttatacagatag 51048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 46277 - 46410
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| | ||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||| |    
T  46277 ttggtacacatatacatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccat 46376  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  46377 tttt-cctaagaaaaactactatttatacagatag 46410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 506 - 646
Target Start/End: Original strand, 44262 - 44402
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||||||||||||||||||    
T  44262 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattg 44361  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaata 646  Q
    | | ||| |||| |||| | |||||| |||||||||||||||    
T  44362 tga-cctgtttttcctaagaaaaactcctatttatacaaata 44402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 506 - 646
Target Start/End: Complemental strand, 58631 - 58491
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||||||||  ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  58631 aatgaaaattggtacacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 58532  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaata 646  Q
    | | ||| |||| |||| | ||||||||||||||||||||||    
T  58531 tga-cctgtttttcctaagaaaaactactatttatacaaata 58491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 1e-25; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 501 - 648
Target Start/End: Complemental strand, 390217 - 390070
Alignment:
Q  501 gattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattg 599  Q
    |||| |||| |||||||| ||||| ||||||| || ||||||||||||||||| |||||||||| |||| | | |||||||||||||||  |||||||||    
T  390217 gatttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtctcttccatacggacagtattgagtgtaagttttgagtatgattg 390118  T
Q  600 aattgttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    |||||| |||| ||||| |||| | ||||||| |||||||| |||||||    
T  390117 aattgtgacccgttttt-cctaagaaaaactaatatttatagaaataga 390070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 25090 - 25232
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  25090 aatgaaaattggtgcacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 25189  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||| |||||||||||||||||    
T  25190 tgacccgttttt-cctaagaaaaacttctatttatacaaataga 25232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 28588 - 28730
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  28588 aatgaaaattggtgcacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 28687  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||| |||||||||||||||||    
T  28688 tgacccgttttt-cctaagaaaaacttctatttatacaaataga 28730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 115347 - 115489
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||| |||||| |||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  115347 aatgaaaattggtgcacatattcatactttgcaactggtgacttgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 115446  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||| |||||||||||||||||    
T  115447 tgacccgttttt-cctaagaaaaacttctatttatacaaataga 115489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 129899 - 130040
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||| |||||| |||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  129899 aatgaaaattggtgcacatattcatactttgcaactggtgacttgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 129998  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |  || |||| |||| | |||||| |||||||||||||||||    
T  129999 tga--ctgtttttcctaagaaaaacttctatttatacaaataga 130040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 60; Significance: 4e-25; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 15845 - 15703
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||||| | |||||||||||||||  |||||||||| |||    
T  15845 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagttttgagtatgattgatttg 15746  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||||||||||||| |||||||    
T  15745 tgacccgttttt-cctaagaaaaactactatttatagaaataga 15703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 16096 - 16019
Alignment:
Q  242 gtaaacaaccgctagtttaaaa-atatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| ||||||||| ||| || || | |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  16096 gtaaacaatcgctagtttcaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 16019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 473 - 604
Target Start/End: Original strand, 26897 - 27027
Alignment:
Q  473 atttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataa 572  Q
    |||||||||||  ||||||||||| |||||||||| |||||||||||||||| |||||||| |   |||||| ||||||||||||| |  |||| ||||     
T  26897 atttaagaaaacaaacttaaattgcattgattgaaagtaaattggtacacatattcatacagtgtgacttgtaactcgtttctctc-taaatgcagatag 26995  T
Q  573 tttgagtgtaagttttttgtatgattgaattg 604  Q
    ||||| ||||||||||||||||| ||||||||    
T  26996 tttgattgtaagttttttgtatggttgaattg 27027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 60; Significance: 4e-25; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 490 - 641
Target Start/End: Original strand, 25739 - 25888
Alignment:
Q  490 taaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt 589  Q
    ||||||| ||| ||| || |||||||||||||||  ||||||||||   |||||| |||| |||||||||   ||||||||||||| ||||||||||||     
T  25739 taaattgcatttattaaacgtaaattggtacacagattcatacattgtgacttgttactcatttctctctaa-atgcggataatttaagtgtaagttttc 25837  T
Q  590 tgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    |||||||||||||||| |||| ||||| |||| | |||||||||||||||||    
T  25838 tgtatgattgaattgtgacccgttttt-cctatgaaaaactactatttatac 25888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 25502 - 25586
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    ||||||||| ||| ||||||||||| ||| ||||||| |||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  25502 gtaaacaactgctggtttaaaaatagttacttgcaagttcaaccagtaaatcttaa-gacatattgtgtttgttattttccagaaa 25586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 373 - 451
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttt 320  Q
    |||||||||| |||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  373 gtaaacaacctctagtttaaaaatagttacttgcaagatcaaccagtaaatctttaggacatattgtgtttgttatttt 451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 564 - 641
Target Start/End: Original strand, 683 - 759
Alignment:
Q  564 tgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
    |||||||| |||||||||||||||||||||||| |||||||| | ||| ||||||||| | |||||||||||||||||    
T  683 tgcggatagtttgagtgtaagttttttgtatgactgaattgtga-cctgttttccctatgaaaaactactatttatac 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 511 - 648
Target Start/End: Complemental strand, 25206 - 25069
Alignment:
Q  511 aaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacc 609  Q
    |||||||| || || ||||||| || ||||||||||||||||| || | ||||| |||| | | |||||||||||||||| ||||||||||||||| |||    
T  25206 aaattggtgcatatattcatactttgcaacttgtgactcgtttgtcgcatccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 25107  T
Q  610 cttttttccctagggaaaactactatttatacaaataga 648  Q
    | ||||| |||| | ||||||||||||||||||||||||    
T  25106 cattttt-cctaagaaaaactactatttatacaaataga 25069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 511 - 647
Target Start/End: Original strand, 8085 - 8221
Alignment:
Q  511 aaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacc 609  Q
    |||||||| ||||  ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||    
T  8085 aaattggtgcacaaattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 8184  T
Q  610 cttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||||  ||| | |||||||||||||||||||||||    
T  8185 cgttttt-tctaagaaaaactactatttatacaaatag 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 511 - 647
Target Start/End: Original strand, 15215 - 15351
Alignment:
Q  511 aaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacc 609  Q
    |||||||| ||||  ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||| |||    
T  15215 aaattggtgcacaaattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 15314  T
Q  610 cttttttccctagggaaaactactatttatacaaatag 647  Q
    | |||||  ||| | |||||||||||||||||||||||    
T  15315 cgttttt-tctaagaaaaactactatttatacaaatag 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 58; Significance: 7e-24; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 514 - 642
Target Start/End: Complemental strand, 39981 - 39853
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| |  ||||||||||||||||| || ||||||| |||| | | |||||||||||||||||||||||||||||||| | |||     
T  39981 ttggtacacatattcatacttcgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtga-cctg 39883  T
Q  613 ttttccctagggaaaactactatttataca 642  Q
    |||| |||| | ||||||||||||||||||    
T  39882 tttttcctaagaaaaactactatttataca 39853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 29342 - 29484
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||| ||| || | | | |||||||||||||||  ||||||||||||||    
T  29342 aatgaaaattggtgcacatattcatacttttcaacttgtgactcgtttgtcgctttcatacgaacagtattgagtgtaagttttgagtatgattgaattg 29441  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | ||||||||||||||||||||||||    
T  29442 tgacccgttttt-cctaagaaaaactactatttatacaaataga 29484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 28538 - 28671
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| |||  | | ||| |||||||||||| ||||||||||||| | |||| |    
T  28538 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgggcagtattgtgtgtaagtttttagtatgattgaattatgacccct 28637  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  28638 tttt-cctaagaaaaactactatttatacagatag 28671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 28812 - 28896
Alignment:
Q  242 gtaaacaaccgctagtttaaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    |||||||||||| |||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  28812 gtaaacaaccgcgagtttaaaaatagttacttgcaagatcaaccagtaaatctt-aggacatattgtgtttgttattttttagaaa 28896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 486 - 644
Target Start/End: Original strand, 31206 - 31362
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagt 585  Q
    ||||||||||| ||  ||||||||||||||||||||||  ||||||||||   | |||| || ||||||||| ||  ||| ||||| ||||||||| |||    
T  31206 aacttaaattgcataaattgaatgtaaattggtacacagattcatacattgtgatttgttacgcgtttctct-ttgaatgtggatagtttgagtgttagt 31304  T
Q  586 tttttgtatgattgaattgttacccttttttccctagggaaaactactatttatacaaa 644  Q
    ||| |||||||||||| | | | | | |||| |||| | ||||||||||||||||||||    
T  31305 tttctgtatgattgaactctga-catgtttttcctaagaaaaactactatttatacaaa 31362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 462 - 618
Target Start/End: Original strand, 14986 - 15141
Alignment:
Q  462 attgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttc 561  Q
    |||||||||  |||||||||||  |||| |||||| ||||||||||||||||| ||||||||  ||||||||||   |||||| |||||||| |||| |     
T  14986 attgcaaaggaatttaagaaaacaaactgaaattgcattgattgaatgtaaatcggtacacaaattcatacattttgacttgtaactcgtttatctc-ta 15084  T
Q  562 catgcggataatttgagtgtaagttttttgtatgattgaattgttacccttttttcc 618  Q
     ||||||||| ||| |||||||||||||||| || ||||||||| |||  |||||||    
T  15085 gatgcggatagttttagtgtaagttttttgtctggttgaattgtgacctgtttttcc 15141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 490 - 641
Target Start/End: Complemental strand, 1545 - 1396
Alignment:
Q  490 taaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt 589  Q
    ||||||| | ||||||||||||||||||||||||  ||||||||||   |||||| |||||||||||||    |||| |||| ||||||||||||||||     
T  1545 taaattgcaatgattgaatgtaaattggtacacagattcatacattctgacttgttactcgtttctctc-cgaatgcagatagtttgagtgtaagttttc 1447  T
Q  590 tgtatgattgaattgttacccttttttccctagggaaaactactatttatac 641  Q
     ||||||||||||||| |||| ||||| | || | |||||||||||||||||    
T  1446 cgtatgattgaattgtgacccgttttt-cttatgaaaaactactatttatac 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 1e-22; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 514 - 648
Target Start/End: Original strand, 118376 - 118510
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||| ||||| ||||||| || ||||||||||||||||| ||  |||||| |||| | | |||||||||||||||  ||||||||||||||| |||| |    
T  118376 ttggtgcacatattcatactttgcaacttgtgactcgtttgtcgattccatacggacagtattgagtgtaagttttgcgtatgattgaattgtgacccgt 118475  T
Q  613 ttttccctagggaaaactactatttatacaaataga 648  Q
    |||| |||| | ||||||||||||||||||||||||    
T  118476 tttt-cctaagaaaaactactatttatacaaataga 118510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 514 - 648
Target Start/End: Original strand, 142226 - 142360
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||   |||||||||||||| |||| |    
T  142226 ttggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgaatatgattgaattgtgacccgt 142325  T
Q  613 ttttccctagggaaaactactatttatacaaataga 648  Q
    |||| |||| | ||||||||||||||||||||||||    
T  142326 tttt-cctaagaaaaactactatttatacaaataga 142360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 118100 - 118177
Alignment:
Q  242 gtaaacaaccgctagtttaaaa-atatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||||| |||| |||| ||| || |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  118100 gtaaacaatcgctggtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 118177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 18500 - 18642
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| ||  |||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  18500 aatgaaaattggtgcacatattcatactttgtaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 18599  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||| |||||| ||||||||||    
T  18600 tgacccgttttt-cctaagaaaaacttctatttctacaaataga 18642  T

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Target: scaffold0021; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 28031 - 28173
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| ||  |||||||||||||||| || ||||||| |||| | | |||||||||||||||| ||||||||||||||    
T  28031 aatgaaaattggtgcacatattcatactttgtaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 28130  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||| |||||| ||||||||||    
T  28131 tgacccgttttt-cctaagaaaaacttctatttctacaaataga 28173  T

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Target: scaffold0040 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 647
Target Start/End: Complemental strand, 41457 - 41324
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | |||||||||||||||| |||||||| |||||| | |||     
T  41457 ttggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattaaattgtga-cctg 41359  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||||||||    
T  41358 tttttcctaagaaaaactactatttatacaaatag 41324  T

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Target: scaffold0795 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 798 - 929
Target Start/End: Complemental strand, 2114 - 1982
Alignment:
Q  798 tctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttcgatgataaggtcagcctattttg 897  Q
    ||||||||||||| |||| ||| ||||||| | | |||||| ||||||||| |||| ||    ||||||||| |||||||||||| |||| || ||||||    
T  2114 tctgtcgaaccgagacacgcgccttcaagtatttccagcaaatccaacttcaatagaaacaggaagacaattccttcgatgataaagtcaacccattttg 2015  T
Q  898 actgcattaaatgataa-ccttaaaaatattgg 929  Q
    | ||||||||||||||| |||||||||||||||    
T  2014 attgcattaaatgataacccttaaaaatattgg 1982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 514 - 647
Target Start/End: Complemental strand, 4638 - 4505
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    ||||||||||| ||||||| || ||||||||||||||||| || ||||||| | || | | ||||||||||| |||| ||||||||||||||| | |||     
T  4638 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatactgacagtattgagtgtaagattttagtatgattgaattgtga-cctc 4540  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    |||| |||| | |||||||||||||||||| ||||    
T  4539 tttttcctaagaaaaactactatttatacagatag 4505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 506 - 646
Target Start/End: Complemental strand, 2562 - 2422
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || |||||||| |||||||| || ||||||| |||| | | ||||| |||||||||| ||||||||||||||    
T  2562 aatgaaaattggtgcacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagggtaagtttttggtatgattgaattg 2463  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaata 646  Q
    | |||| ||||| | || | |||||| |||||||||||||||    
T  2462 tgacccgttttt-cttaagaaaaacttctatttatacaaata 2422  T

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Target: scaffold0064 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 506 - 642
Target Start/End: Original strand, 43120 - 43256
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||  ||||||| || |||||| |||||||||| || ||||||| |||| | | |||||||||||| ||| ||||||||||||||    
T  43120 aatgaaaattggtgcacagattcatactttgcaacttatgactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgaattg 43219  T
Q  605 ttacccttttttccctagggaaaactactatttataca 642  Q
    | |||| ||||| |||| | ||||||||||||||||||    
T  43220 tgacccgttttt-cctaagaaaaactactatttataca 43256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 506 - 638
Target Start/End: Complemental strand, 63904 - 63772
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || ||||||||||||||||| || ||||||| |||| | | || ||||||| ||||| ||||||||||||||    
T  63904 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattg 63805  T
Q  605 ttacccttttttccctagggaaaactactattta 638  Q
    | |||| ||||| |||| | ||||||||||||||    
T  63804 tgacccgttttt-cctaagaaaaactactattta 63772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 64159 - 64101
Alignment:
Q  260 aaaaatatttatttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatt 318  Q
    |||||| |||| |||||||||||| ||||||||||||||  ||||||||| || |||||    
T  64159 aaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttatt 64101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 537 - 647
Target Start/End: Complemental strand, 1831 - 1721
Alignment:
Q  537 caacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttacccttttttccctagggaaaactactat 635  Q
    ||||||||||||||||| || ||||||| |||| | | |||||  ||||||||| ||||||||||||||| |||| ||||| |||| | |||||||||||    
T  1831 caacttgtgactcgtttgtcgcttccatacggacagtattgagcataagtttttagtatgattgaattgtgacccattttt-cctaagaaaaactactat 1733  T
Q  636 ttatacaaatag 647  Q
    ||||||||||||    
T  1732 ttatacaaatag 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 506 - 648
Target Start/End: Original strand, 26778 - 26920
Alignment:
Q  506 aatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattg 604  Q
    |||| |||||||| ||||| ||||||| || |||||||||| |||||| || |  |||| |||| | | |||||||||||||||| ||||||||||||||    
T  26778 aatgaaaattggtgcacatattcatactttgcaacttgtgaatcgtttgtcgcaaccatacggacagtattgagtgtaagtttttagtatgattgaattg 26877  T
Q  605 ttacccttttttccctagggaaaactactatttatacaaataga 648  Q
    | |||| ||||| |||| | |||||  |||||||||||||||||    
T  26878 tgacccgttttt-cctaagaaaaacccctatttatacaaataga 26920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 43451 - 43505
Alignment:
Q  272 ttgcaagatcaatcagtaaatcttaaggacatattgtgtttgttatttttcagaaa 327  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  43451 ttgcaagatcaaccagtaaatcttaag-acatattgtgtttgttattttccagaaa 43505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 559
Target Start/End: Original strand, 43653 - 43726
Alignment:
Q  486 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctct 559  Q
    ||||||||||| ||  ||||||||||||||||||||||  |||||||||    |||||| ||||||||||||||    
T  43653 aacttaaattgcataaattgaatgtaaattggtacacagattcatacatcgagacttgttactcgtttctctct 43726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 15332 - 15465
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgttaccctt 612  Q
    |||||| |||| || |||| || |||||||| |||||||| || ||||||| |||| | | ||||| |||||||||| ||||||||||||||| ||| ||    
T  15332 ttggtaaacatattaatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgaccatt 15431  T
Q  613 ttttccctagggaaaactactatttatacaaatag 647  Q
    || | | ||   |||||||||||||||||| ||||    
T  15432 ttat-cataaaaaaaactactatttatacagatag 15465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 553
Target Start/End: Complemental strand, 32241 - 32202
Alignment:
Q  514 ttggtacacatgttcatacattacaacttgtgactcgttt 553  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  32241 ttggtacacatgttcatactttgcaacttgtgactcgttt 32202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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