View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4481-Insertion-10 (Length: 234)
Name: NF4481-Insertion-10
Description: NF4481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4481-Insertion-10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 234
Target Start/End: Complemental strand, 48175860 - 48175634
Alignment:
| Q |
8 |
tcaaccatgaatatacaataaaaactttattcataacaaacagttccaatgcttctggattaaaaacaactcccattttcatattcatctgcaacagaac |
107 |
Q |
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| T |
48175860 |
tcaaccatgaatatacaataaaaactttattcataacaaacagttccaatgcttctggattaaaaacaactcccattttcatattcatctgcaacagaac |
48175761 |
T |
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| Q |
108 |
atacatacaagtatcaagttagttagcatcagatgcgctctcccttattttcctatataaagtactactgagttctgaattgtggtccgcaatcacaatc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48175760 |
atacatacaagtatcaagttagttagcatcagatgcgctctcccttattttcctatataaagtactactgagttctgaattgtggtccgcaatcacaatc |
48175661 |
T |
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| Q |
208 |
gcggccccaagacaaagattttagagg |
234 |
Q |
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||||||||||||||||||||||||||| |
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| T |
48175660 |
gcggccccaagacaaagattttagagg |
48175634 |
T |
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