View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4481_high_17 (Length: 264)

Name: NF4481_high_17
Description: NF4481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4481_high_17
NF4481_high_17
[»] chr2 (3 HSPs)
chr2 (4-250)||(27867384-27867630)
chr2 (104-229)||(9501489-9501614)
chr2 (52-133)||(28279427-28279509)
[»] chr4 (3 HSPs)
chr4 (16-250)||(12023700-12023928)
chr4 (6-205)||(15788411-15788610)
chr4 (16-171)||(12032131-12032280)
[»] chr6 (2 HSPs)
chr6 (4-156)||(12972919-12973071)
chr6 (70-229)||(18388530-18388689)
[»] chr7 (5 HSPs)
chr7 (27-245)||(7955177-7955394)
chr7 (12-171)||(25705346-25705504)
chr7 (50-163)||(19709625-19709738)
chr7 (30-133)||(20146413-20146515)
chr7 (27-82)||(1072446-1072501)
[»] scaffold0043 (1 HSPs)
scaffold0043 (4-147)||(57799-57943)
[»] chr5 (3 HSPs)
chr5 (53-164)||(16604129-16604239)
chr5 (70-148)||(17026524-17026602)
chr5 (94-148)||(23177119-23177173)
[»] chr3 (4 HSPs)
chr3 (70-166)||(11520034-11520131)
chr3 (42-229)||(14426516-14426704)
chr3 (31-85)||(20097506-20097559)
chr3 (54-91)||(20097589-20097626)
[»] chr1 (3 HSPs)
chr1 (50-137)||(47376436-47376523)
chr1 (4-91)||(74001-74090)
chr1 (70-188)||(23222447-23222566)
[»] scaffold1429 (1 HSPs)
scaffold1429 (5-131)||(540-668)
[»] chr8 (1 HSPs)
chr8 (52-133)||(16053452-16053534)


Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 250
Target Start/End: Complemental strand, 27867630 - 27867384
Alignment:
Q  4 agattttaagccaaatatatttccactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  27867630 agattttaagccaaatatatttccactttctactatagttctttcatatatgtgtgttccatgtggattgctatttttcctcgaaatttatgtcgttctc 27867531  T
Q  104 tacggactatcggttttattatcatacacaagagacacttgttttggtacctcgagcctttttcaagctaccttgatttattattgttatatcctctgtg 203  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27867530 tacggactatcggttttattatcatacacacgagacacttgttttggtacctcaagcctttttcaagctaccttgatttattattgttatatcctttgtg 27867431  T
Q  204 aagccaatttaagcctccttgcattatttcttaccttgttacctatg 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27867430 aagccaatttaagcctccttgcattatttcttaccttgttacctatg 27867384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 9501489 - 9501614
Alignment:
Q  104 tacggactatcggttttattatcatacacaagagacacttg-ttttggtacctcgagcctttttcaagctaccttgatttattattgttatatcctctgt 202  Q
    ||||||||||| ||| |||| ||||||||| |||||| ||| |||||||| || ||||||||||||||| ||| ||| || | |||  |||||| |||||    
T  9501489 tacggactatcagttgtattgtcatacacacgagacatttgtttttggtaactagagcctttttcaagccaccctgaattgtcatt-atatatcttctgt 9501587  T
Q  203 gaagccaatttaagcctccttgcatta 229  Q
    |||  || ||| ||||||| |||||||    
T  9501588 gaaatcactttgagcctccatgcatta 9501614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 28279509 - 28279427
Alignment:
Q  52 tatgtgtgttccatgt-gaattgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacaca 133  Q
    |||| ||||||||||| | ||| ||| ||||||||||||||| ||  |||||||| |||||||||||| |||| |||||||||    
T  28279509 tatgagtgttccatgttggatttctacttttgctcgaaatttcggaagttctctatggactatcggttgtattgtcatacaca 28279427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 12023928 - 12023700
Alignment:
Q  16 aaatatatttccactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggactatcg 115  Q
    ||||||||||||||||| ||||||| |||||||||||||||||  |||||||| |||||||||||| |||    ||||||| |||||||||||||||||     
T  12023928 aaatatatttccactttttactatatttctttcatatatgtgt--tccatgtggattgctatttttcctc----tttaggttgttctctacggactatca 12023835  T
Q  116 gttttattatcatacacaagagacacttgttttggtacctcgagcctttttcaagctaccttgatttattattgttatatcctctgtgaagccaatttaa 215  Q
     || |||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||  || |||||||||||||||| | |||||| | | ||| |    
T  12023834 attatattatcatacacatgagacacttgttttggtactttgagcctttttcaagccacccggaattattattgttatatcatttgtgaaactagtttga 12023735  T
Q  216 gcctccttgcattatttcttaccttgttacctatg 250  Q
    ||||||  ||| |||||||| | ||||||| ||||    
T  12023734 gcctccaagcaatatttctttctttgttacttatg 12023700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 15788610 - 15788411
Alignment:
Q  6 attttaagccaaatatatttccactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctcta 105  Q
    ||||| |||||||||||||| ||||||||||||||  |||||||| ||||||||||||||||| |||||||||||| || |||||||    | ||  |||    
T  15788610 attttgagccaaatatattttcactttctactatatatctttcatttatgtgtgttccatgtggattgctatttttacttgaaatttttaacatttacta 15788511  T
Q  106 cggactatcggttttattatcatacacaagagacacttgttttggtacctcgagcctttttcaagctaccttgatttattattgttatatcctctgtgaa 205  Q
    |||||||||   | |||||||||||||  ||||||||||||||||||||| |||| || || |||| ||| | |||||||||||||||||||| ||||||    
T  15788510 cggactatcatatatattatcatacacgcgagacacttgttttggtaccttgagctttatttaagccaccctaatttattattgttatatcctttgtgaa 15788411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 12032131 - 12032280
Alignment:
Q  16 aaatatatttccactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggactatcg 115  Q
    |||||||||||||||||||| |||| |||||||||||||||||  |||||||| |||| ||||||| |||    ||||||| |||||||||||||||||     
T  12032131 aaatatatttccactttctattatatttctttcatatatgtgt--tccatgtggattgatatttttcctc----tttaggttgttctctacggactatca 12032224  T
Q  116 gttttattatcatacacaagagacacttgttttggtacctcgagcctttttcaagc 171  Q
    ||| |||||||||||||| ||||||||||||||| ||||| ||| |||||||||||    
T  12032225 gttatattatcatacacatgagacacttgttttgataccttgagtctttttcaagc 12032280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 12973071 - 12972919
Alignment:
Q  4 agattttaagccaaatatat-ttccactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttct 102  Q
    ||||||| |||||||||||| |||||||||||||| || |||||||||||||||||||||||||||  || ||||||||||| |||||||   ||| |||    
T  12973071 agattttgagccaaatatatattccactttctact-taattctttcatatatgtgtgttccatgtggttttctatttttgcttgaaatttctctcgctct 12972973  T
Q  103 ctacggactatcggttttattatcatacacaagagacacttgttttggtacctc 156  Q
    ||| |||||||| ||| |||||||||||||| ||| ||||||| ||||||||||    
T  12972972 ctagggactatcagttatattatcatacacatgaggcacttgtcttggtacctc 12972919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 18388530 - 18388689
Alignment:
Q  70 attgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagagacacttgtttt--ggtacctcgagcctttttc 167  Q
    ||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||| ||||| ||| ||  || |||||||   |||||| ||||||||||     
T  18388530 attgctatttttgcttgaaattttggttgttctctacgaactatcggttttattgtcatatacacgaagcatttgtttttccgtacctagagcctttttg 18388629  T
Q  168 aagctaccttgatttattattgttatatcctctgtgaagccaatttaagcctccttgcatta 229  Q
    |||| |||| ||  |||||||||| |||||| |||||| ||| ||| ||||||| |||||||    
T  18388630 aagccacctaga-atattattgtt-tatcctttgtgaaaccactttgagcctccatgcatta 18388689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 7955177 - 7955394
Alignment:
Q  27 cactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatc 126  Q
    |||||||||||||| ||||||  ||||||||||||||||||  |||| |||||||||| |||| || | ||||| |||||   |||| | || |||||||    
T  7955177 cactttctactatatttcttttgtatatgtgtgttccatgtcgattgttatttttgctggaaagttcgatcgttatctacatgctattgattatattatc 7955276  T
Q  127 atacacaagagacacttgttttggtacctcgagcctttttcaagctaccttgatttattattgttatatcctctgtgaagccaatttaagcctccttgca 226  Q
    ||||||| ||  |||||| |||||||||| || | |||||||||| |||| |||||||||||||||||| || ||  || ||  ||| ||||||||||||    
T  7955277 atacacatgatgcacttg-tttggtaccttgatcttttttcaagccacctggatttattattgttatatactatgctaaacccctttgagcctccttgca 7955375  T
Q  227 ttatttcttaccttgttac 245  Q
    ||| ||||| | |||||||    
T  7955376 ttacttctttctttgttac 7955394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 25705346 - 25705504
Alignment:
Q  12 agccaaatatatttccactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggact 111  Q
    |||||||||| ||||||||||||||| || ||| ||  ||||||||||||| ||||  |||| ||||||||||  ||| |  ||| ||||| ||| ||||    
T  25705346 agccaaatatttttccactttctactttatttcatttgtatatgtgtgttctatgttgattgttatttttgctacaaagtgtggttgttctatacagact 25705445  T
Q  112 atcggttttattatcatacacaagagacacttgttttggtacctcgagcctttttcaagc 171  Q
    || |||| ||| |||||||||| |||||| ||  |||||||||| | |||||||| ||||    
T  25705446 attggttgtatcatcatacacacgagaca-tttctttggtaccttgtgccttttttaagc 25705504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 19709625 - 19709738
Alignment:
Q  50 tatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagagacacttgttttg 149  Q
    ||||| ||||||||||||| |||| ||| |||||||||||||  | ||||||| ||  |||||| |||| |||||||||||| |  || |||||||||||    
T  19709625 tatatatgtgttccatgtggattgttatgtttgctcgaaattgcgatcgttctttagagactattggttgtattatcatacatacaaggcacttgttttg 19709724  T
Q  150 gtacctcgagcctt 163  Q
    ||| || |||||||    
T  19709725 gtatcttgagcctt 19709738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 20146413 - 20146515
Alignment:
Q  30 tttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcata 129  Q
    ||||||||||| ||||||  | ||||||||||||||||| |||| || ||| ||||||||||  |||| ||||  | |||||||||||| ||||||||||    
T  20146413 tttctactataattctttt-tgtatgtgtgttccatgtggattgttagtttagctcgaaattgtggtcattcttcatggactatcggttgtattatcata 20146511  T
Q  130 caca 133  Q
    ||||    
T  20146512 caca 20146515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 1072446 - 1072501
Alignment:
Q  27 cactttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttg 82  Q
    |||||||||||||| ||||||| |||||||||||||||| |  |||| ||||||||    
T  1072446 cactttctactatatttctttcgtatatgtgtgttccatatcgattgttatttttg 1072501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 57799 - 57943
Alignment:
Q  4 agattttaagccaaatatat-ttccact--ttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgtt 100  Q
    ||||||| |||||||||||| |||||||  |||||||||| ||||||| ||||||||||||||||||  | || |||||||||||||||||  || ||||    
T  57799 agattttgagccaaatatatattccactctttctactataattctttc-tatatgtgtgttccatgtcgaatgttatttttgctcgaaattgtggccgtt 57897  T
Q  101 ctctacggactatcggttttattatcatacacaagagacacttgttt 147  Q
     | || ||| ||| |||| ||||||||||||||  || |||||||||    
T  57898 -tttatggattattggttgtattatcatacacacaaggcacttgttt 57943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 16604239 - 16604129
Alignment:
Q  53 atgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagagacacttgttttggta 152  Q
    ||||||||||||||   |||| ||||||| || ||||||  ||||||||| |||||||||||  || ||||||||||| || |||||||||| |||||||    
T  16604239 atgtgtgttccatgcagattgttattttt-cttgaaattgcggtcgttctttacggactatcatttgtattatcatactcacgagacacttgatttggta 16604141  T
Q  153 cctcgagccttt 164  Q
    ||| ||||||||    
T  16604140 ccttgagccttt 16604129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 17026524 - 17026602
Alignment:
Q  70 attgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagagacacttgtttt 148  Q
    ||||||||||||||||||||||| ||||||||  ||| |||||||| || |||| ||||||||| |||||| |||||||    
T  17026524 attgctatttttgctcgaaattttggtcgttcattacagactatcgtttgtattgtcatacacacgagacatttgtttt 17026602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 23177173 - 23177119
Alignment:
Q  94 ggtcgttctctacggactatcggttttattatcatacacaagagacacttgtttt 148  Q
    ||||||||||||||||||||| ||| |||| ||||||||| |||| | |||||||    
T  23177173 ggtcgttctctacggactatcagttgtattgtcatacacacgagatatttgtttt 23177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 11520034 - 11520131
Alignment:
Q  70 attgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagagacacttg-ttttggtacctcgagccttttt 166  Q
    ||||||||||||||| ||||||| |||| |||  ||| |||||| |||| |||| ||||||||| |||||| ||| ||||||||||| ||||||||||    
T  11520034 attgctatttttgcttgaaatttcggtcattcgttacagactattggttgtattgtcatacacacgagacatttgtttttggtacctagagccttttt 11520131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 14426516 - 14426704
Alignment:
Q  42 ttctttcatatatgtgtgttccatgtga-attgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagagaca 140  Q
    ||||||||| |||| ||||| ||||| | ||||||||||||||| ||||||  |||||  || || |||||||| ||| |||| ||||||||| ||| ||    
T  14426516 ttctttcat-tatgagtgtttcatgttagattgctatttttgcttgaaattgtggtcgcactttagggactatcagttatattgtcatacacatgaggca 14426614  T
Q  141 cttg-ttttggtacctcgagcctttttcaagctaccttgatttattattgttatatcctctgtgaagcca-atttaagcctccttgcatta 229  Q
     ||| |||||||| || ||||||||||||| | ||| ||| |||| ||| || |||||| |||||| |||  ||| ||||||| |||||||    
T  14426615 tttgtttttggtaactagagcctttttcaatccaccctgaattatcattatt-tatcctttgtgaaaccacttttgagcctccatgcatta 14426704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 20097506 - 20097559
Alignment:
Q  31 ttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctc 85  Q
    |||||||||| ||||||| |||||||||||| |||||| |||| |||||||||||    
T  20097506 ttctactataattctttc-tatatgtgtgtttcatgtggattgttatttttgctc 20097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 20097589 - 20097626
Alignment:
Q  54 tgtgtgttccatgtgaattgctatttttgctcgaaatt 91  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  20097589 tgtgtgttccatgtggattgttatttttgctcgaaatt 20097626  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 47376523 - 47376436
Alignment:
Q  50 tatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagag 137  Q
    ||||| ||||||||||||| |||| |||||||| | ||||||| ||||||||||| || | |||||||| |||||| | |||||||||    
T  47376523 tatatatgtgttccatgtggattgttatttttgttggaaattttggtcgttctctgcgaattatcggttatattatgaaacacaagag 47376436  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 74090 - 74001
Alignment:
Q  4 agattttaagccaaatatat-ttccact--ttctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatt 91  Q
    ||||||| |||||||||||| |||||||  |||||||| | || |||| ||||||||||||||||||| |||| ||||||| |||||||||    
T  74090 agattttgagccaaatatatattccactctttctactacaattatttc-tatatgtgtgttccatgtggattgttatttttactcgaaatt 74001  T

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Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 23222447 - 23222566
Alignment:
Q  70 attgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacacaagagacactt-gttttggtacctcgagcctttttca 168  Q
    ||||||||||||||| |||||||   ||||||| ||||||||||| ||| |||| ||||||||| ||| || ||  | ||||||  | ||||||||||||    
T  23222447 attgctatttttgcttgaaattttaatcgttctatacggactatcagttatattgtcatacacacgaggcatttaatgttggtatatggagcctttttca 23222546  T
Q  169 agctaccttgatttattatt 188  Q
    ||| ||| ||| ||||||||    
T  23222547 agccaccctgaattattatt 23222566  T

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Target: scaffold1429 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1429
Description:

Target: scaffold1429; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 668 - 540
Alignment:
Q  5 gattttaagccaaatatat-ttccacttt--ctactatagttctttcatatatgtgtgttccatgtgaattgctatttttgctcgaaatttaggtcgttc 101  Q
    ||||||||||||||||||| |||||||||  |||||||| || || | |||||||| |||||| ||| |||| ||||||||||| |||||   || |||     
T  668 gattttaagccaaatatatattccactttttctactataatttttac-tatatgtgcgttccaagtggattgttatttttgctcaaaattgcagtagtta 570  T
Q  102 tctacggactatcggttttattatcataca 131  Q
    | ||| |||||| |||| ||||||||||||    
T  569 tttacagactattggttgtattatcataca 540  T

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Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 16053534 - 16053452
Alignment:
Q  52 tatgtgtgttccatgt-gaattgctatttttgctcgaaatttaggtcgttctctacggactatcggttttattatcatacaca 133  Q
    |||| ||||||||||| | |||| |||||||||||||||||| || |||||||||  ||||||| ||| |||| |||||||||    
T  16053534 tatgagtgttccatgttggattgttatttttgctcgaaatttcggacgttctctatagactatcagttatattgtcatacaca 16053452  T

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