View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4482_high_2 (Length: 560)
Name: NF4482_high_2
Description: NF4482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4482_high_2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 514; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 17 - 546
Target Start/End: Original strand, 3062281 - 3062810
Alignment:
| Q |
17 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggaatacaacagatggaagcaactgtgctttattg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
3062281 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggcatacaacagctggaagcaactgtgctttattg |
3062380 |
T |
|
| Q |
117 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3062381 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
3062480 |
T |
|
| Q |
217 |
aatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3062481 |
aatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
3062580 |
T |
|
| Q |
317 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttat |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3062581 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttat |
3062680 |
T |
|
| Q |
417 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3062681 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
3062780 |
T |
|
| Q |
517 |
gctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
||||| |||||||||||||| ||||||||| |
|
|
| T |
3062781 |
gctgtcctgctgttcactttttctgttttt |
3062810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 17 - 546
Target Start/End: Complemental strand, 26083416 - 26082887
Alignment:
| Q |
17 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggaatacaacagatggaagcaactgtgctttattg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |
|
|
| T |
26083416 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggaatacaatagctggaagcaactgtgctttatgg |
26083317 |
T |
|
| Q |
117 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26083316 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaaccaagcatattcaagtgaagtaccatgccatacgtgaggctgttaaa |
26083217 |
T |
|
| Q |
217 |
aatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
316 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26083216 |
aatcaagagatcaagcttattcatcgttgttccgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
26083117 |
T |
|
| Q |
317 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttat |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26083116 |
tgcttggagtgtccatccaaaatctcaaggaagagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttat |
26083017 |
T |
|
| Q |
417 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26083016 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
26082917 |
T |
|
| Q |
517 |
gctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
||||| ||||||||||||| ||||||||| |
|
|
| T |
26082916 |
gctgtcttgctgttcactttttctgttttt |
26082887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 352 - 546
Target Start/End: Original strand, 3058315 - 3058509
Alignment:
| Q |
352 |
tgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttattttaatgtagtagttgaagttacctctgcagaagt |
451 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3058315 |
tgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttattttaatgtagtagttgaagttacctctgcagaagt |
3058414 |
T |
|
| Q |
452 |
atggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
3058415 |
atggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgtcctgctgttcactttttctgttttt |
3058509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 26065216 - 26065164
Alignment:
| Q |
355 |
tgagacattgagatttcagatgtacacaatagtattttgtgatattttatgtt |
407 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
26065216 |
tgagacattgagatttcagattaatacaatagtattttgtgatattttatgtt |
26065164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 514; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 17 - 546
Target Start/End: Complemental strand, 17439919 - 17439390
Alignment:
| Q |
17 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggaatacaacagatggaagcaactgtgctttattg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17439919 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactcgatgacttgggaatacaacagctggaagcaactgtgctttattg |
17439820 |
T |
|
| Q |
117 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17439819 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
17439720 |
T |
|
| Q |
217 |
aatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17439719 |
aatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
17439620 |
T |
|
| Q |
317 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttat |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17439619 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttat |
17439520 |
T |
|
| Q |
417 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17439519 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
17439420 |
T |
|
| Q |
517 |
gctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
||||| |||||||||||||| ||||||||| |
|
|
| T |
17439419 |
gctgtcctgctgttcactttttctgttttt |
17439390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 352 - 546
Target Start/End: Complemental strand, 17443886 - 17443692
Alignment:
| Q |
352 |
tgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttattttaatgtagtagttgaagttacctctgcagaagt |
451 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17443886 |
tgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttattttaatgtagtagttgaagttacctctgcagaagt |
17443787 |
T |
|
| Q |
452 |
atggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
17443786 |
atggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgtcctgctgttcactttttctgttttt |
17443692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 503; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 17 - 546
Target Start/End: Original strand, 4876924 - 4877451
Alignment:
| Q |
17 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggaatacaacagatggaagcaactgtgctttattg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4876924 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggaatacaacagctggaagcaactgtgctttattg |
4877023 |
T |
|
| Q |
117 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4877024 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
4877123 |
T |
|
| Q |
217 |
aatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
316 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4877124 |
aatcaagagatcaagcttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
4877223 |
T |
|
| Q |
317 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttat |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4877224 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagtattttgtgatattt--tgttttcttttat |
4877321 |
T |
|
| Q |
417 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4877322 |
tttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactat |
4877421 |
T |
|
| Q |
517 |
gctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
||||| |||||||||||||| ||||||||| |
|
|
| T |
4877422 |
gctgtcctgctgttcactttttctgttttt |
4877451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 17 - 546
Target Start/End: Original strand, 30189541 - 30190071
Alignment:
| Q |
17 |
agtatgtagccgcagctgcagcagcaaaccaagctatttggttgaggaaaatactctatgacttgggaatacaacagatggaagcaactgtgctttattg |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||| |||| || |
|
|
| T |
30189541 |
agtatgtagctgcagctgcagcagcaaatcaagctatttggttgaggaaaatagtctatgatttggggatacaacagctggaagcaactgtggtttactg |
30189640 |
T |
|
| Q |
117 |
tgatagtaaatcagcaattgctattgctgaaaatccagttcaacatggaaaaacaaagcatattcaagtgaagtaccatgccatacgcgaggctgttaaa |
216 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
30189641 |
tgatagtaaatcagcaattgttattgctgaaaatccagttcaacatggaaaaaccaagcatattcaagtgaagttccatgccatacgcgaggctgtcaaa |
30189740 |
T |
|
| Q |
217 |
aatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
316 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30189741 |
aatcaagagatcaagcttattcactgttgttccgactctcaagtttctgatatattgactaaatctcttccaagagctaagtttgaaaagtttcgagaat |
30189840 |
T |
|
| Q |
317 |
tgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtacacaatagta-ttttgtgatattttatgttttctttta |
415 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30189841 |
tgcttggagggtccatccaaaatctcaaggaggagtgttgagacattgagctttcagatgtacacaatagtatttttgtgatattttatgttttctttta |
30189940 |
T |
|
| Q |
416 |
ttttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactacta |
515 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30189941 |
ttttaatgtagtagttgaagttacctctgcaaaagtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactacta |
30190040 |
T |
|
| Q |
516 |
tgctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
|||||| |||||||||||||| ||||||||| |
|
|
| T |
30190041 |
tgctgtcctgctgttcactttttctgttttt |
30190071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 352 - 546
Target Start/End: Original strand, 4872957 - 4873151
Alignment:
| Q |
352 |
tgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttattttaatgtagtagttgaagttacctctgcagaagt |
451 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4872957 |
tgttgagacattgagatttcagatgtacacaatagtattttgtgatattttattttttcttttattttaatgtagtagttgaagttacctctgcagaagt |
4873056 |
T |
|
| Q |
452 |
atggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
4873057 |
atggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgtcctgctgttcactttttctgttttt |
4873151 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 350 - 546
Target Start/End: Complemental strand, 6668146 - 6667950
Alignment:
| Q |
350 |
agtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttatgttttcttttattttaatgtagtagttgaagttacctctgcagaa |
449 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6668146 |
agtgttgagacattgagatttcagatgtacacaatagtattttgtgatattttattttttcttttattttaatgtagtagttgaagttacctctgcagaa |
6668047 |
T |
|
| Q |
450 |
gtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgttctgctgttcactttctctgttttt |
546 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
6668046 |
gtatggtgacccatacttgttagagtgtttaagactttgtaatcttggttaggtgacagactactatgctgtcctgctgttcactttttctgttttt |
6667950 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 124; Significance: 2e-63; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 193 - 380
Target Start/End: Complemental strand, 28013939 - 28013761
Alignment:
| Q |
193 |
catgccatacgcgaggctgttaaaaatcaagagatcaaacttattcattgttgttctgactctcaagtttctgatatattgactaaatctcttccaagag |
292 |
Q |
| |
|
||||||||||| ||| |||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28013939 |
catgccatacgtgagactgtcaaaaatcaagagatcaagcttattcattgttgctcaaactctcaagtttctgatatattgactaaatctcttccaagag |
28013840 |
T |
|
| Q |
293 |
ctaagtttgaaaagtttcgagaattgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtaca |
380 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28013839 |
ctaa---------gtttcgaggattgcttggagtgtccatccaaaatctcaaggaggagtgttgagacattgagatttcagatgtaca |
28013761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 13015492 - 13015364
Alignment:
| Q |
51 |
tatttggttgaggaaaatactctatgacttgggaatacaacagatggaagcaactgtgctttattgtgatagtaaatcagcaattgctattgctgaaaat |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13015492 |
tatttggttgaggaaaatactctatgacttgggaatacaacagctggaagcaactgtgctttattgtgatagtaaatcagcaattgctattgctgaaaat |
13015393 |
T |
|
| Q |
151 |
ccagttcaacatggaaaaacaaagcatat |
179 |
Q |
| |
|
||| |||||||||||||||| |||||||| |
|
|
| T |
13015392 |
ccaattcaacatggaaaaaccaagcatat |
13015364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 377 - 479
Target Start/End: Complemental strand, 28010402 - 28010300
Alignment:
| Q |
377 |
tacacaatagtattttgtgatattttatgttttcttttattttaatgtagtagttgaagttacctctgcagaagtatggtgacccatacttgttagagtg |
476 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
28010402 |
tacataatagtattttgtgatattttatgttatcttttgttttaatatagttgttgaagttacctctgcataagtatggtgacccatacttgttgaagtg |
28010303 |
T |
|
| Q |
477 |
ttt |
479 |
Q |
| |
|
||| |
|
|
| T |
28010302 |
ttt |
28010300 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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