View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4483-Insertion-3 (Length: 608)

Name: NF4483-Insertion-3
Description: NF4483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4483-Insertion-3
NF4483-Insertion-3
[»] chr4 (64 HSPs)
chr4 (58-302)||(12674189-12674429)
chr4 (542-608)||(1166646-1166712)
chr4 (542-608)||(1169128-1169194)
chr4 (542-608)||(6940178-6940244)
chr4 (542-608)||(7400209-7400275)
chr4 (542-608)||(10137883-10137949)
chr4 (542-608)||(13890996-13891062)
chr4 (542-608)||(28116843-28116909)
chr4 (542-608)||(32206596-32206662)
chr4 (542-608)||(40950952-40951018)
chr4 (542-608)||(53274635-53274701)
chr4 (542-608)||(55188177-55188243)
chr4 (542-608)||(7365803-7365869)
chr4 (542-608)||(11967004-11967070)
chr4 (542-608)||(26111385-26111451)
chr4 (542-608)||(27288474-27288540)
chr4 (542-608)||(34264632-34264698)
chr4 (542-608)||(55208488-55208554)
chr4 (357-416)||(12674075-12674134)
chr4 (542-608)||(8847945-8848011)
chr4 (542-608)||(11200840-11200906)
chr4 (542-608)||(17624667-17624733)
chr4 (542-608)||(23628842-23628908)
chr4 (542-608)||(36190059-36190125)
chr4 (542-608)||(55991826-55991892)
chr4 (542-608)||(11180915-11180981)
chr4 (542-608)||(24303803-24303869)
chr4 (542-608)||(41144305-41144371)
chr4 (542-608)||(43117525-43117591)
chr4 (542-604)||(46045795-46045857)
chr4 (542-608)||(17976454-17976520)
chr4 (542-608)||(18138342-18138408)
chr4 (542-608)||(22556971-22557037)
chr4 (542-608)||(26097651-26097717)
chr4 (542-608)||(40665528-40665593)
chr4 (542-608)||(49125552-49125618)
chr4 (544-600)||(51153499-51153555)
chr4 (542-608)||(29099625-29099691)
chr4 (542-604)||(32139419-32139481)
chr4 (542-608)||(32200716-32200782)
chr4 (542-608)||(37873646-37873712)
chr4 (542-608)||(40849735-40849801)
chr4 (547-604)||(39651746-39651803)
chr4 (545-608)||(8654318-8654380)
chr4 (542-608)||(346607-346673)
chr4 (542-608)||(20681202-20681268)
chr4 (552-600)||(28361503-28361551)
chr4 (542-594)||(40952041-40952093)
chr4 (542-605)||(51187627-51187690)
chr4 (542-604)||(8151213-8151274)
chr4 (552-602)||(25881932-25881982)
chr4 (542-608)||(30071348-30071414)
chr4 (573-608)||(34663877-34663912)
chr4 (573-608)||(45472468-45472503)
chr4 (553-608)||(24631113-24631167)
chr4 (573-608)||(52620645-52620680)
chr4 (553-603)||(29346238-29346287)
chr4 (553-603)||(35832002-35832051)
chr4 (571-608)||(10262027-10262063)
chr4 (571-608)||(21562392-21562428)
chr4 (571-608)||(24080098-24080134)
chr4 (556-597)||(41105971-41106012)
chr4 (571-608)||(43329913-43329949)
chr4 (553-593)||(9097481-9097521)
[»] scaffold0197 (1 HSPs)
scaffold0197 (542-608)||(25716-25782)
[»] chr8 (56 HSPs)
chr8 (542-608)||(16239168-16239234)
chr8 (542-608)||(17046010-17046076)
chr8 (542-608)||(17313541-17313607)
chr8 (542-608)||(39685430-39685496)
chr8 (542-608)||(44602938-44603004)
chr8 (542-607)||(27467720-27467785)
chr8 (542-608)||(14718874-14718940)
chr8 (542-608)||(34805796-34805862)
chr8 (542-608)||(44908503-44908569)
chr8 (542-608)||(169705-169771)
chr8 (542-608)||(6816039-6816105)
chr8 (542-608)||(7219386-7219452)
chr8 (542-608)||(11924775-11924841)
chr8 (542-608)||(16845035-16845101)
chr8 (542-608)||(36059276-36059342)
chr8 (542-608)||(36216576-36216642)
chr8 (542-608)||(37034832-37034898)
chr8 (542-608)||(38139319-38139385)
chr8 (546-608)||(41360997-41361059)
chr8 (542-608)||(43817964-43818030)
chr8 (542-608)||(2184410-2184476)
chr8 (542-608)||(26518796-26518861)
chr8 (542-608)||(39486028-39486094)
chr8 (542-608)||(1877578-1877644)
chr8 (542-608)||(2190647-2190713)
chr8 (542-608)||(39525460-39525526)
chr8 (544-608)||(38137721-38137785)
chr8 (542-601)||(41526324-41526383)
chr8 (542-604)||(11579204-11579266)
chr8 (542-608)||(38909294-38909360)
chr8 (542-608)||(42844287-42844352)
chr8 (542-599)||(39997991-39998048)
chr8 (542-608)||(34997538-34997604)
chr8 (542-604)||(42984002-42984064)
chr8 (542-604)||(12261469-12261532)
chr8 (542-604)||(15310407-15310470)
chr8 (542-604)||(15490776-15490839)
chr8 (542-597)||(27914929-27914984)
chr8 (542-597)||(27961348-27961403)
chr8 (542-600)||(45139050-45139108)
chr8 (542-598)||(14449611-14449667)
chr8 (555-602)||(9275854-9275901)
chr8 (542-597)||(27748853-27748908)
chr8 (542-597)||(27877985-27878040)
chr8 (542-597)||(28018166-28018221)
chr8 (543-608)||(34325870-34325935)
chr8 (544-604)||(40048678-40048739)
chr8 (572-608)||(1922396-1922432)
chr8 (552-608)||(44655074-44655130)
chr8 (573-604)||(33848722-33848753)
chr8 (561-608)||(39201528-39201574)
chr8 (542-593)||(41904778-41904829)
chr8 (542-593)||(45296785-45296836)
chr8 (571-608)||(20665621-20665657)
chr8 (552-597)||(41903138-41903183)
chr8 (556-596)||(39140812-39140852)
[»] chr7 (46 HSPs)
chr7 (542-608)||(10999119-10999185)
chr7 (542-608)||(12907918-12907984)
chr7 (542-608)||(17278161-17278227)
chr7 (542-608)||(27031229-27031295)
chr7 (542-608)||(29448717-29448783)
chr7 (542-608)||(32960796-32960862)
chr7 (542-608)||(40239897-40239963)
chr7 (542-608)||(41426970-41427036)
chr7 (544-608)||(23639417-23639481)
chr7 (544-608)||(37669271-37669335)
chr7 (542-608)||(1448107-1448173)
chr7 (542-608)||(18956298-18956364)
chr7 (542-608)||(38045664-38045730)
chr7 (542-608)||(40789186-40789252)
chr7 (542-603)||(43156203-43156264)
chr7 (544-608)||(45620656-45620720)
chr7 (542-608)||(41343320-41343386)
chr7 (542-605)||(4400065-4400128)
chr7 (542-605)||(47840740-47840803)
chr7 (542-608)||(4406627-4406693)
chr7 (542-600)||(21134356-21134414)
chr7 (542-608)||(44651882-44651948)
chr7 (553-608)||(4615399-4615454)
chr7 (542-608)||(4408036-4408101)
chr7 (542-608)||(6607103-6607169)
chr7 (542-608)||(20482286-20482352)
chr7 (542-608)||(36769232-36769298)
chr7 (543-600)||(5483420-5483477)
chr7 (542-608)||(5526114-5526177)
chr7 (555-608)||(4404301-4404354)
chr7 (542-598)||(40036027-40036083)
chr7 (542-608)||(4492435-4492500)
chr7 (542-596)||(23154654-23154707)
chr7 (553-602)||(3840030-3840079)
chr7 (565-605)||(20135099-20135139)
chr7 (542-598)||(36765592-36765648)
chr7 (573-608)||(43111041-43111076)
chr7 (542-593)||(42915378-42915429)
chr7 (553-603)||(17816601-17816650)
chr7 (553-603)||(19050351-19050400)
chr7 (542-604)||(38049237-38049299)
chr7 (571-608)||(19036360-19036396)
chr7 (571-608)||(20718240-20718276)
chr7 (571-608)||(29488487-29488523)
chr7 (571-608)||(33232655-33232691)
chr7 (571-608)||(34284797-34284833)
[»] chr6 (28 HSPs)
chr6 (542-608)||(559735-559801)
chr6 (542-608)||(3850233-3850299)
chr6 (542-608)||(18593610-18593676)
chr6 (542-608)||(20791554-20791620)
chr6 (542-608)||(24046560-24046626)
chr6 (543-608)||(33945824-33945889)
chr6 (542-608)||(28472229-28472295)
chr6 (542-608)||(32244385-32244451)
chr6 (542-608)||(5414562-5414628)
chr6 (545-608)||(6018577-6018640)
chr6 (545-608)||(6833559-6833622)
chr6 (542-604)||(29043219-29043281)
chr6 (542-608)||(34207003-34207069)
chr6 (542-608)||(34247755-34247821)
chr6 (544-608)||(10945717-10945781)
chr6 (542-608)||(7541113-7541179)
chr6 (542-608)||(24162800-24162866)
chr6 (542-606)||(17505496-17505560)
chr6 (542-598)||(19988908-19988964)
chr6 (542-608)||(173062-173128)
chr6 (542-608)||(29859417-29859483)
chr6 (542-608)||(8866971-8867037)
chr6 (542-608)||(3053915-3053980)
chr6 (547-608)||(18314014-18314074)
chr6 (542-604)||(28231075-28231136)
chr6 (571-608)||(247426-247462)
chr6 (571-608)||(12582487-12582523)
chr6 (571-608)||(29976322-29976359)
[»] chr5 (62 HSPs)
chr5 (542-608)||(2475274-2475340)
chr5 (542-608)||(6928360-6928426)
chr5 (542-608)||(31884665-31884731)
chr5 (542-606)||(25821231-25821295)
chr5 (545-608)||(24027863-24027926)
chr5 (542-608)||(16050774-16050840)
chr5 (542-608)||(24758988-24759054)
chr5 (542-608)||(26379220-26379286)
chr5 (542-608)||(27176476-27176542)
chr5 (542-608)||(31939835-31939901)
chr5 (542-608)||(42110694-42110760)
chr5 (542-608)||(665562-665628)
chr5 (542-608)||(2530091-2530157)
chr5 (542-608)||(4374857-4374923)
chr5 (542-608)||(32261715-32261781)
chr5 (542-608)||(40308346-40308412)
chr5 (542-608)||(42322882-42322948)
chr5 (544-608)||(3297827-3297891)
chr5 (542-606)||(5589467-5589531)
chr5 (542-608)||(789026-789092)
chr5 (542-608)||(28746318-28746384)
chr5 (542-604)||(36083804-36083866)
chr5 (542-608)||(39803853-39803919)
chr5 (542-608)||(43396526-43396592)
chr5 (542-602)||(15976494-15976554)
chr5 (542-600)||(19361664-19361722)
chr5 (542-608)||(29383727-29383793)
chr5 (542-604)||(37147077-37147139)
chr5 (542-608)||(42111809-42111875)
chr5 (543-608)||(10042798-10042863)
chr5 (544-608)||(36088584-36088648)
chr5 (544-608)||(40506804-40506868)
chr5 (544-608)||(42416806-42416870)
chr5 (542-608)||(790061-790127)
chr5 (542-608)||(3246835-3246901)
chr5 (542-604)||(7536655-7536717)
chr5 (542-608)||(8314835-8314901)
chr5 (542-608)||(29874668-29874734)
chr5 (542-604)||(16166292-16166354)
chr5 (542-608)||(19270911-19270977)
chr5 (547-608)||(28990943-28991005)
chr5 (542-603)||(35380505-35380566)
chr5 (542-594)||(29382576-29382628)
chr5 (548-608)||(31958390-31958449)
chr5 (542-608)||(14720186-14720252)
chr5 (547-597)||(15875756-15875806)
chr5 (542-608)||(30503532-30503598)
chr5 (542-608)||(30543875-30543941)
chr5 (542-594)||(14205433-14205485)
chr5 (542-597)||(2001506-2001561)
chr5 (550-608)||(1060711-1060768)
chr5 (542-583)||(30503759-30503800)
chr5 (542-583)||(30544102-30544143)
chr5 (548-589)||(39782983-39783024)
chr5 (542-597)||(36515058-36515113)
chr5 (553-604)||(43354523-43354573)
chr5 (542-608)||(3213231-3213296)
chr5 (554-604)||(28869363-28869413)
chr5 (571-604)||(28887195-28887228)
chr5 (571-608)||(37461878-37461914)
chr5 (572-604)||(2463651-2463683)
chr5 (556-600)||(36242337-36242381)
[»] chr3 (56 HSPs)
chr3 (542-608)||(29500341-29500407)
chr3 (542-608)||(30269084-30269150)
chr3 (542-608)||(45599267-45599333)
chr3 (542-608)||(54510387-54510453)
chr3 (542-606)||(52461038-52461102)
chr3 (542-608)||(4018925-4018991)
chr3 (542-608)||(14587387-14587453)
chr3 (542-608)||(20849404-20849470)
chr3 (542-608)||(53022675-53022741)
chr3 (542-608)||(7040890-7040956)
chr3 (542-608)||(13450281-13450347)
chr3 (542-608)||(26881630-26881696)
chr3 (542-608)||(33932486-33932552)
chr3 (542-608)||(36592216-36592282)
chr3 (542-608)||(39721268-39721334)
chr3 (542-608)||(43316516-43316582)
chr3 (542-608)||(48545118-48545184)
chr3 (542-608)||(54741812-54741878)
chr3 (544-608)||(2909441-2909505)
chr3 (544-608)||(29450668-29450732)
chr3 (544-608)||(44762725-44762789)
chr3 (542-608)||(22347079-22347146)
chr3 (542-608)||(7265064-7265130)
chr3 (542-608)||(12101464-12101530)
chr3 (542-608)||(19536716-19536782)
chr3 (542-608)||(35690212-35690278)
chr3 (542-608)||(38361759-38361825)
chr3 (542-608)||(46090118-46090184)
chr3 (542-608)||(46757568-46757633)
chr3 (542-608)||(50739163-50739229)
chr3 (542-608)||(50773626-50773692)
chr3 (546-608)||(52674792-52674853)
chr3 (544-604)||(36987740-36987800)
chr3 (544-604)||(37013179-37013239)
chr3 (544-608)||(47719493-47719557)
chr3 (542-608)||(41990764-41990830)
chr3 (544-608)||(48961128-48961192)
chr3 (542-608)||(13337108-13337173)
chr3 (542-604)||(15496470-15496532)
chr3 (542-608)||(37413578-37413644)
chr3 (542-608)||(42187749-42187815)
chr3 (542-608)||(46850711-46850777)
chr3 (542-608)||(54113421-54113487)
chr3 (542-608)||(54203746-54203812)
chr3 (542-604)||(20996334-20996396)
chr3 (542-604)||(46088720-46088782)
chr3 (542-608)||(50933213-50933279)
chr3 (563-607)||(875840-875884)
chr3 (548-608)||(12996818-12996877)
chr3 (542-602)||(33899842-33899902)
chr3 (542-608)||(35906684-35906750)
chr3 (553-598)||(10617639-10617684)
chr3 (542-593)||(8238921-8238972)
chr3 (553-600)||(54835743-54835790)
chr3 (542-608)||(54195682-54195748)
chr3 (571-608)||(44075414-44075450)
[»] chr2 (36 HSPs)
chr2 (542-608)||(970962-971028)
chr2 (542-608)||(1835694-1835760)
chr2 (542-608)||(5166275-5166341)
chr2 (542-608)||(7233032-7233098)
chr2 (542-608)||(7274679-7274745)
chr2 (542-608)||(8878128-8878194)
chr2 (542-608)||(18166833-18166899)
chr2 (542-608)||(24926085-24926151)
chr2 (542-608)||(31972291-31972357)
chr2 (542-608)||(36085947-36086013)
chr2 (544-608)||(4631217-4631281)
chr2 (542-608)||(8683668-8683734)
chr2 (542-608)||(3243295-3243361)
chr2 (542-608)||(3324264-3324330)
chr2 (544-608)||(34912660-34912724)
chr2 (542-608)||(36078556-36078622)
chr2 (542-608)||(38879145-38879211)
chr2 (542-608)||(3079726-3079792)
chr2 (542-608)||(10120618-10120684)
chr2 (542-608)||(40202224-40202290)
chr2 (542-604)||(41452828-41452890)
chr2 (542-604)||(45474735-45474797)
chr2 (542-608)||(668294-668360)
chr2 (542-604)||(17032813-17032875)
chr2 (542-588)||(20313248-20313294)
chr2 (542-608)||(35423795-35423861)
chr2 (547-604)||(38709708-38709765)
chr2 (542-600)||(2180035-2180093)
chr2 (542-608)||(1117987-1118055)
chr2 (547-608)||(9799330-9799391)
chr2 (542-585)||(38959644-38959687)
chr2 (550-607)||(37522706-37522763)
chr2 (571-608)||(3708460-3708496)
chr2 (571-608)||(11868920-11868956)
chr2 (571-608)||(17051167-17051204)
chr2 (571-608)||(35360313-35360349)
[»] chr1 (51 HSPs)
chr1 (542-608)||(11583165-11583231)
chr1 (542-608)||(17585524-17585590)
chr1 (542-608)||(25659810-25659876)
chr1 (542-608)||(33373820-33373886)
chr1 (542-608)||(33642619-33642685)
chr1 (542-608)||(33895217-33895283)
chr1 (542-608)||(39327043-39327109)
chr1 (542-608)||(41901700-41901766)
chr1 (542-608)||(45104189-45104255)
chr1 (542-608)||(47037131-47037197)
chr1 (543-608)||(43120780-43120845)
chr1 (542-608)||(3265125-3265191)
chr1 (542-608)||(7833554-7833620)
chr1 (542-608)||(9574870-9574936)
chr1 (542-608)||(11754228-11754294)
chr1 (542-608)||(14487324-14487390)
chr1 (542-608)||(33818094-33818160)
chr1 (542-608)||(33831925-33831991)
chr1 (542-608)||(33877562-33877628)
chr1 (542-608)||(33894087-33894153)
chr1 (542-608)||(36165521-36165587)
chr1 (542-608)||(38802314-38802380)
chr1 (547-608)||(40432208-40432269)
chr1 (542-608)||(24473551-24473617)
chr1 (542-608)||(43119114-43119180)
chr1 (542-604)||(43123051-43123113)
chr1 (542-608)||(46588091-46588157)
chr1 (542-608)||(17249044-17249110)
chr1 (543-608)||(36952714-36952779)
chr1 (542-601)||(16097358-16097417)
chr1 (542-608)||(39879140-39879206)
chr1 (542-608)||(46040486-46040552)
chr1 (544-604)||(34078295-34078355)
chr1 (542-608)||(1322525-1322591)
chr1 (544-600)||(17366355-17366411)
chr1 (542-608)||(18091283-18091348)
chr1 (550-608)||(34652283-34652341)
chr1 (542-594)||(7308331-7308383)
chr1 (552-608)||(31638425-31638481)
chr1 (544-600)||(39729206-39729262)
chr1 (548-607)||(23730301-23730359)
chr1 (542-585)||(31215864-31215907)
chr1 (542-585)||(31221619-31221662)
chr1 (542-608)||(11606467-11606533)
chr1 (544-598)||(33932934-33932988)
chr1 (542-593)||(28568754-28568805)
chr1 (555-602)||(44065455-44065502)
chr1 (547-593)||(17670009-17670055)
chr1 (546-604)||(43124366-43124424)
chr1 (542-604)||(49571214-49571276)
chr1 (547-604)||(49223163-49223219)
[»] scaffold0481 (2 HSPs)
scaffold0481 (542-608)||(4512-4578)
scaffold0481 (542-608)||(7456-7522)
[»] scaffold0178 (1 HSPs)
scaffold0178 (542-608)||(7292-7358)
[»] scaffold0166 (1 HSPs)
scaffold0166 (542-608)||(1482-1548)
[»] scaffold0024 (2 HSPs)
scaffold0024 (544-608)||(90463-90527)
scaffold0024 (544-600)||(110529-110585)
[»] scaffold0198 (1 HSPs)
scaffold0198 (542-608)||(15261-15327)
[»] scaffold0244 (1 HSPs)
scaffold0244 (542-608)||(7574-7640)
[»] scaffold0768 (1 HSPs)
scaffold0768 (545-608)||(6306-6369)
[»] scaffold0027 (1 HSPs)
scaffold0027 (544-604)||(138031-138091)
[»] scaffold0003 (1 HSPs)
scaffold0003 (542-597)||(229101-229156)
[»] scaffold0020 (1 HSPs)
scaffold0020 (542-608)||(132665-132730)
[»] scaffold0318 (1 HSPs)
scaffold0318 (542-597)||(1072-1127)
[»] scaffold0078 (1 HSPs)
scaffold0078 (542-602)||(5732-5793)
[»] scaffold0038 (1 HSPs)
scaffold0038 (542-604)||(31572-31633)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-110; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 58 - 302
Target Start/End: Complemental strand, 12674429 - 12674189
Alignment:
Q  58 ataaaaagtgcatgttttctatgcaacacgcaatcaatgtctttgactgtccttcttccttgtttctgcacattcaactccttcaattcaaataagtcca 157  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12674429 ataaaaagtgcatgtgttctatgcaacacgcaatcaatgtctttgactgtccttcttccttgtttctgcacattcaactccttcaattcaaataagtcga 12674330  T
Q  158 catctgcaaaacagatacaacaacagtggcaacaaagtgatgacccctgccaccaattttagaacgaaatggggaaactgattttgcgtctccgtaatgg 257  Q
    ||| ||||||||||||   | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12674329 catgtgcaaaacagat---ataacagtggcaacaaagtgatgacccctaccaccaattttagaacgaaatggggaaactgattttgcgtctccgtaatgg 12674233  T
Q  258 gatcccagattttattatcggcaccatggaactggaggaaacgag 302  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  12674232 gat-ccagattttattatcggcaccatggaactggaggaaacgag 12674189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 1166712 - 1166646
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1166712 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 1166646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 1169194 - 1169128
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1169194 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 1169128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 6940178 - 6940244
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6940178 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 6940244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 7400209 - 7400275
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7400209 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 7400275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 10137883 - 10137949
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10137883 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 10137949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 13890996 - 13891062
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13890996 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 13891062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 28116843 - 28116909
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28116843 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 28116909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 32206596 - 32206662
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32206596 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 32206662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 40951018 - 40950952
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40951018 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 40950952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 53274701 - 53274635
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53274701 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 53274635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 55188243 - 55188177
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55188243 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 55188177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7365869 - 7365803
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7365869 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 7365803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 11967004 - 11967070
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11967004 agttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 11967070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 26111451 - 26111385
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26111451 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 26111385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 27288474 - 27288540
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27288474 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttatta 27288540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 34264632 - 34264698
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34264632 agttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 34264698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 55208488 - 55208554
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55208488 agttctacagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 55208554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 12674134 - 12674075
Alignment:
Q  357 caatcttataaaaatttcaatccaacggttgtgatctccttagactatccgcaatggtga 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12674134 caatcttataaaaatttcaatccaacggttgtgatctccttagactatccgcaatggtga 12674075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 8848011 - 8847945
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8848011 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 8847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 11200906 - 11200840
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  11200906 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaattttgaatttatta 11200840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 17624733 - 17624667
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  17624733 agttctaaagttatttttaagttaaaagctgtttggcaaaatattatacaaaactttgaatttatta 17624667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 23628908 - 23628842
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23628908 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 23628842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 36190059 - 36190125
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  36190059 agttctaaagttatttttgagttaaaagttgtttgacaaaatattgtacaaaactttgaatttatta 36190125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 55991892 - 55991826
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  55991892 agttctaaaattatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 55991826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 11180981 - 11180915
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  11180981 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacattgaatttatta 11180915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 24303803 - 24303869
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  24303803 agttctaaagttatttttaagttaaaagttatttggcaaaatattgtacaaaactttgaatttatta 24303869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 41144305 - 41144371
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  41144305 agttctaaagttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaatttatta 41144371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 43117591 - 43117525
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43117591 agttctaaagttgtttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 43117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 46045795 - 46045857
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  46045795 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 46045857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 17976520 - 17976454
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17976520 agttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttatta 17976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 18138408 - 18138342
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  18138408 agttctaaagttatttttaagttaaaagttctttggcataatattgtacaaaactttgaatttatta 18138342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 22557037 - 22556971
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  22557037 agttctaaagttatttttaagttaaaagttgtttgacaaaatattttacaaaactttgaatttatta 22556971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 26097651 - 26097717
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26097651 agttttaaagttattttgaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 26097717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 40665593 - 40665528
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  40665593 agttctaaagttatttttaagttaaa-gctgtttgacaaaatattgtacaaaactttgaatttatta 40665528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 49125618 - 49125552
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  49125618 agttctaaagttatttttaagttaaaagttctttggcataatattgtacaaaactttgaatttatta 49125552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 600
Target Start/End: Complemental strand, 51153555 - 51153499
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  51153555 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttga 51153499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 29099625 - 29099691
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  29099625 agttgtaaagttatttttcagttaaaagttgtttggcaaaatattgtataaaactttaaatttatta 29099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 32139481 - 32139419
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||| |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  32139481 agttttaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 32139419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 32200716 - 32200782
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  32200716 agttttaaagttatttttaaattaaaagttgtttggcagaatattgtacaaaactttgaatttatta 32200782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 37873646 - 37873712
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||||||||  ||||||||||||    
T  37873646 agttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaaagttgaatttatta 37873712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 40849801 - 40849735
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||    
T  40849801 agttataaagttatttttaagttaaaaattgtttgtcaaaatattgtacaaaactttgaatttatta 40849735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 39651803 - 39651746
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  39651803 taaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaactttgaattt 39651746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 8654318 - 8654380
Alignment:
Q  545 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  8654318 tctaaagttatttttaagttaaaaattgtttggcaaa-tattgtacaaaactttgaatttatta 8654380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 346607 - 346673
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||| || ||||||||| | ||||||||| ||||||||||||| ||||||||||||    
T  346607 agttctaaagttattgttaagttaaaagttctttggcaaactattgtacaaaacattgaatttatta 346673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 20681268 - 20681202
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||||||| ||||||| |||||||||||| |||| ||||||||||||    
T  20681268 agttttaaagttatttttaagttaaaagttgtttggtaaaatattgtacgaaacattgaatttatta 20681202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 552 - 600
Target Start/End: Original strand, 28361503 - 28361551
Alignment:
Q  552 ttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  28361503 ttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttga 28361551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 40952093 - 40952041
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaa 594  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  40952093 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaa 40952041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 605
Target Start/End: Complemental strand, 51187690 - 51187627
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattta 605  Q
    |||||| ||||||||||| ||||||||| ||||||||| |||| ||||||||| ||||||||||    
T  51187690 agttctgaagttatttttaagttaaaagttgtttggcagaataatgtacaaaattttgaattta 51187627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 8151274 - 8151213
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||| |||||||| ||||||||| |||||| |||||| ||||||||||||||||||||    
T  8151274 agttctaaaattatttttaagttaaaagttgtttgacaaaat-ttgtacaaaactttgaattt 8151213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 552 - 602
Target Start/End: Complemental strand, 25881982 - 25881932
Alignment:
Q  552 ttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaat 602  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  25881982 ttatttttaagttaaaagttgtttagcaaaatattgtacaaaactttgaat 25881932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 30071414 - 30071348
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| | || |||| ||||||||||||||| |||||||||||| |||||||||    
T  30071414 agttataaagttatttttaactttaaagttgtttggcaaaatatcgtacaaaactttaaatttatta 30071348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 608
Target Start/End: Complemental strand, 34663912 - 34663877
Alignment:
Q  573 tttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||    
T  34663912 tttggcaaaatattgtacaaaactttgaatttatta 34663877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 608
Target Start/End: Original strand, 45472468 - 45472503
Alignment:
Q  573 tttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||    
T  45472468 tttggcaaaatattgtacaaaactttgaatttatta 45472503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 608
Target Start/End: Original strand, 24631113 - 24631167
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| ||||||||| ||||||| ||||||||||| || |||||||||||||||    
T  24631113 tatttttaagttaaaagttgtttggaaaaatattgta-aatactttgaatttatta 24631167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 573 - 608
Target Start/End: Complemental strand, 52620680 - 52620645
Alignment:
Q  573 tttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||| |||||||||||    
T  52620680 tttggcaaaatattgtacaaaactctgaatttatta 52620645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 553 - 603
Target Start/End: Original strand, 29346238 - 29346287
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatt 603  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||    
T  29346238 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 29346287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 553 - 603
Target Start/End: Original strand, 35832002 - 35832051
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatt 603  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||    
T  35832002 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 35832051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 10262027 - 10262063
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  10262027 tgtttggcaaaatattgtac-aaactttgaatttatta 10262063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 21562428 - 21562392
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21562428 tgtttggcaaaatattgtac-aaactttgaatttatta 21562392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 24080098 - 24080134
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  24080098 tgtttggcaaaatattgtac-aaactttgaatttatta 24080134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 597
Target Start/End: Complemental strand, 41106012 - 41105971
Alignment:
Q  556 ttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  41106012 ttttaagttaaaagttgtttggcaaaatattgtataaaactt 41105971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 43329949 - 43329913
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  43329949 tgtttggcaaaatattgtac-aaactttgaatttatta 43329913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 593
Target Start/End: Original strand, 9097481 - 9097521
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaa 593  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  9097481 tatttttaagttaaatgttgtttggcaaaatattgtacaaa 9097521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 25782 - 25716
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25782 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 25716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 16239168 - 16239234
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16239168 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 16239234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 17046010 - 17046076
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17046010 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 17046076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 17313541 - 17313607
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17313541 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 17313607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 39685496 - 39685430
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39685496 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 39685430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 44602938 - 44603004
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44602938 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 44603004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 542 - 607
Target Start/End: Complemental strand, 27467785 - 27467720
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27467785 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatt 27467720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 14718940 - 14718874
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14718940 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttaaatttatta 14718874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 34805862 - 34805796
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34805862 agttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 34805796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 44908569 - 44908503
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44908569 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 44908503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 169705 - 169771
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  169705 agttctaaagttatttttaagttaaaaactgtttggcaaaatattgtacaaaactttgaatttatta 169771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 6816105 - 6816039
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6816105 agttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 6816039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7219452 - 7219386
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  7219452 agttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaattttgaatttatta 7219386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 11924841 - 11924775
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  11924841 agttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 11924775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 16845101 - 16845035
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  16845101 agttctaaagttatttttgaattaaaagctgtttggcaaaatattgtacaaaattttgaatttatta 16845035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 36059276 - 36059342
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36059276 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 36059342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 36216576 - 36216642
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  36216576 agttctaaagttatttttgagttaaaagttgtttggcaaaatattatacaaaactttgaatttatta 36216642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 37034898 - 37034832
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37034898 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 37034832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 38139385 - 38139319
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38139385 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 38139319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 546 - 608
Target Start/End: Complemental strand, 41361059 - 41360997
Alignment:
Q  546 ctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41361059 ctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttatta 41360997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 43817964 - 43818030
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  43817964 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttatta 43818030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 2184410 - 2184476
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||    
T  2184410 agttctaaagttattttaaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttatta 2184476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 26518796 - 26518861
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26518796 agttctaaa-ttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 26518861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 39486028 - 39486094
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39486028 agttctacagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 39486094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 1877578 - 1877644
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  1877578 agttctaacgttatttttaagttaaaaattgtttggcaaaatattgtacaaaactttgaatttatta 1877644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 2190647 - 2190713
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||    
T  2190647 agttctaaaattattttgaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttatta 2190713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 39525526 - 39525460
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  39525526 agttctaaagttatttttaatttaaaagttgtttggcaaaatattgtgcaaaactttgaatttatta 39525460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 38137721 - 38137785
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  38137721 ttctaaagttatttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttatta 38137785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 542 - 601
Target Start/End: Complemental strand, 41526383 - 41526324
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaa 601  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  41526383 agttctaaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaactttgaa 41526324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 11579266 - 11579204
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||    
T  11579266 agttctaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaaatttgaattt 11579204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 38909360 - 38909294
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| || ||| ||||||||||||||||| |||||||||||||    
T  38909360 agttctaaagttatttttaagttaaaagttgcttgacaaaatattgtacaaaattttgaatttatta 38909294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 42844352 - 42844287
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  42844352 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtac-aaactttaaatttatta 42844287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 39998048 - 39997991
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttg 599  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  39998048 agttctaaagttatttttgagttaaaagttgtttagcaaaaaattgtacaaaactttg 39997991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 34997604 - 34997538
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |  ||||||||||    
T  34997604 agttctatagttatttttaagttaaaagttgtttggcaaaatattgtacaaaattaggaatttatta 34997538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 42984064 - 42984002
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || |||||    
T  42984064 agttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaacatttaattt 42984002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 12261469 - 12261532
Alignment:
Q  542 agttctaaagttatttttgagttaaaa-gctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||| ||||||||||||| |||||||| | |||||| |||||||||||||||||||||||||||    
T  12261469 agttttaaagttatttttaagttaaaaagttgtttgacaaaatattgtacaaaactttgaattt 12261532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 15310470 - 15310407
Alignment:
Q  542 agttctaaagttatttttgagttaaaagct-gtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||| |||||||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  15310470 agttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaattt 15310407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 15490839 - 15490776
Alignment:
Q  542 agttctaaagttatttttgagttaaaagct-gtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||| |||||||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  15490839 agttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaattt 15490776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 27914984 - 27914929
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| |||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  27914984 agttttaaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 27961403 - 27961348
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| |||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  27961403 agttttaaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 600
Target Start/End: Original strand, 45139050 - 45139108
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||| ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||    
T  45139050 agttttaaagttatttttaagttaaaagttgttcggcaaaatattgtacaaaattttga 45139108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 14449611 - 14449667
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttt 598  Q
    ||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||    
T  14449611 agttctaaagttatttttatgttaaaagttgtttaacaaaatattgtacaaaacttt 14449667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 602
Target Start/End: Complemental strand, 9275901 - 9275854
Alignment:
Q  555 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaat 602  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  9275901 tttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaat 9275854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 27748908 - 27748853
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||| | ||||||||    
T  27748908 agttttaaagttatttttaagttaaaagttgtttggcaaaatattatgcaaaactt 27748853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 27878040 - 27877985
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| |||||||| |||| ||||||||| |||||| ||||||||||||||||||||    
T  27878040 agttttaaagttagttttaagttaaaagttgtttgacaaaatattgtacaaaactt 27877985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 28018221 - 28018166
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| |||||||| |||| ||||||||| |||||| ||||||||||||||||||||    
T  28018221 agttttaaagttagttttaagttaaaagttgtttgacaaaatattgtacaaaactt 28018166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 608
Target Start/End: Complemental strand, 34325935 - 34325870
Alignment:
Q  543 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| |||||| || ||||||||| |||||| |||||||||||| |||| ||| |||||||||    
T  34325935 gttctaaggttattcttaagttaaaagttgtttgacaaaatattgtaaaaaattttaaatttatta 34325870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 40048678 - 40048739
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctg-tttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||| ||||||||| || ||| ||| |||||||| |||||||||||||||    
T  40048678 ttctaaagttatttttaagttaaaagttgtttttgcagaatattgtccaaaactttgaattt 40048739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 572 - 608
Target Start/End: Complemental strand, 1922432 - 1922396
Alignment:
Q  572 gtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1922432 gtttgacaaaatattgtacaaaactttgaatttatta 1922396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 552 - 608
Target Start/End: Complemental strand, 44655130 - 44655074
Alignment:
Q  552 ttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||| ||| ||||| ||||||||||||| || |||||||||||||||| ||||    
T  44655130 ttatttttaagtcaaaagttgtttggcaaaattttatacaaaactttgaattaatta 44655074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 573 - 604
Target Start/End: Original strand, 33848722 - 33848753
Alignment:
Q  573 tttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||||||||||||||||||||||||||    
T  33848722 tttggcaaaatattgtacaaaactttgaattt 33848753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 608
Target Start/End: Complemental strand, 39201574 - 39201528
Alignment:
Q  561 agttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||||    
T  39201574 agttaaatgttgtttggcaaaatattgtacaaaa-tttgaatttatta 39201528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 41904829 - 41904778
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaa 593  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  41904829 agttttaaagctatttttaagttaaatgttgtttggcaaaatattgtacaaa 41904778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 593
Target Start/End: Original strand, 45296785 - 45296836
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaa 593  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  45296785 agttttaaagctatttttaagttaaatgttgtttggcaaaatattgtacaaa 45296836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 20665621 - 20665657
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  20665621 tgtttggcaaaatattgtac-aaactttgaatttatta 20665657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 597
Target Start/End: Original strand, 41903138 - 41903183
Alignment:
Q  552 ttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||||||| ||||||||  ||||||||||||||||||| |||||||    
T  41903138 ttatttttaagttaaaatttgtttggcaaaatattgtataaaactt 41903183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 596
Target Start/End: Original strand, 39140812 - 39140852
Alignment:
Q  556 ttttgagttaaaagctgtttggcaaaatattgtacaaaact 596  Q
    |||| ||||||||| ||||| ||||||||||||||||||||    
T  39140812 ttttaagttaaaagttgtttagcaaaatattgtacaaaact 39140852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 10999185 - 10999119
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10999185 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 10999119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 12907984 - 12907918
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12907984 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 12907918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 17278227 - 17278161
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17278227 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 17278161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 27031229 - 27031295
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27031229 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 27031295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 29448717 - 29448783
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29448717 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 29448783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 32960796 - 32960862
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32960796 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 32960862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 40239897 - 40239963
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40239897 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 40239963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 41427036 - 41426970
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41427036 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 41426970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 23639417 - 23639481
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23639417 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 23639481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 37669271 - 37669335
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37669271 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 37669335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 1448173 - 1448107
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1448173 agttctaaagctatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 1448107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 18956298 - 18956364
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18956298 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttatta 18956364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 38045730 - 38045664
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38045730 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaagctttgaatttatta 38045664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 40789252 - 40789186
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40789252 agttataaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 40789186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 542 - 603
Target Start/End: Complemental strand, 43156264 - 43156203
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatt 603  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43156264 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatt 43156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 45620720 - 45620656
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45620720 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 45620656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 41343320 - 41343386
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  41343320 agttctaaagttatttttaagttaaatgttgtttggcaaaatattgtacaaaactttgaatttatta 41343386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 605
Target Start/End: Original strand, 4400065 - 4400128
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattta 605  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  4400065 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaattta 4400128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 605
Target Start/End: Complemental strand, 47840803 - 47840740
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattta 605  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  47840803 agttctaaagttatttttaagttgaaagttgtttggcaaaatattgtacaaaactttgaattta 47840740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 4406627 - 4406693
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4406627 agttccaaagttaattttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 4406693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 600
Target Start/End: Original strand, 21134356 - 21134414
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  21134356 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttga 21134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 44651882 - 44651948
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  44651882 agttctaaagttatttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttatta 44651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 553 - 608
Target Start/End: Complemental strand, 4615454 - 4615399
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4615454 tatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 4615399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 4408036 - 4408101
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  4408036 agttttaaagttatttttaagttaaaagctgtttggcaaaatattgta-taaactttgaatttatta 4408101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 6607169 - 6607103
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  6607169 agttctaaatttatttttaagttaaaatctgtttggcaaaatattatacaaaactttaaatttatta 6607103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 20482352 - 20482286
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||    
T  20482352 agttttaaagttttttttaatttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 20482286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 36769298 - 36769232
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||| |||||||||    
T  36769298 agttctaaagttatttttaagttaaaagttgtttggcaaaataaagtacaaaactttaaatttatta 36769232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 600
Target Start/End: Complemental strand, 5483477 - 5483420
Alignment:
Q  543 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  5483477 gttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaactttga 5483420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 5526177 - 5526114
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||||   |||| |||||||||||||||||||||||||||||||    
T  5526177 agttctaaagttatttttaagttaaaag---tttgacaaaatattgtacaaaactttgaatttatta 5526114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 555 - 608
Target Start/End: Complemental strand, 4404354 - 4404301
Alignment:
Q  555 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  4404354 tttttaagttaaaagttgtttggcaaaatattgtacaaaacattgaatttatta 4404301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 40036027 - 40036083
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttt 598  Q
    |||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  40036027 agttttaaagttatttttaagttaaaagttttttggcaaaatattgtacaaaacttt 40036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 4492435 - 4492500
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||| ||||||||  | ||||||| | ||||||||||||||||||||||||||||||||||||    
T  4492435 agttctaaggttattttaaa-ttaaaagttatttggcaaaatattgtacaaaactttgaatttatta 4492500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 596
Target Start/End: Complemental strand, 23154707 - 23154654
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaact 596  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  23154707 agttctaaagttatttta-agttaaaagttgtttggcaaaatattgtacaaaact 23154654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 602
Target Start/End: Complemental strand, 3840079 - 3840030
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaat 602  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  3840079 tatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaat 3840030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 565 - 605
Target Start/End: Original strand, 20135099 - 20135139
Alignment:
Q  565 aaaagctgtttggcaaaatattgtacaaaactttgaattta 605  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  20135099 aaaagttgtttggcaaaatattgtacaaaactttgaattta 20135139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 36765648 - 36765592
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttt 598  Q
    |||||||||||||||||| ||||||||| |||||| |||||||  ||||||||||||    
T  36765648 agttctaaagttatttttaagttaaaagttgtttgacaaaataaagtacaaaacttt 36765592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 608
Target Start/End: Complemental strand, 43111076 - 43111041
Alignment:
Q  573 tttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||    
T  43111076 tttggcaaaatattgtacaaaactttgaatttatta 43111041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 42915429 - 42915378
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaa 593  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  42915429 agttttaaagctatttttaagttaaatgttgtttggcaaaatattgtacaaa 42915378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 553 - 603
Target Start/End: Complemental strand, 17816650 - 17816601
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatt 603  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||    
T  17816650 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 17816601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 553 - 603
Target Start/End: Original strand, 19050351 - 19050400
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatt 603  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||    
T  19050351 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 19050400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 38049237 - 38049299
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||| |||| |||||||| | ||||||| ||||||| ||||||||||||| |||||| |||||    
T  38049237 agttttaaaattatttttaaattaaaagttgtttggtaaaatattgtacacaacttttaattt 38049299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 19036360 - 19036396
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  19036360 tgtttggcaaaatattgtac-aaactttgaatttatta 19036396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 20718276 - 20718240
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  20718276 tgtttggcaaaatattgtac-aaactttgaatttatta 20718240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 29488523 - 29488487
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  29488523 tgtttggcaaaatattgtac-aaactttgaatttatta 29488487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 33232655 - 33232691
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  33232655 tgtttggcaaaatattgtac-aaactttgaatttatta 33232691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 34284797 - 34284833
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34284797 tgtttggcaaaatattgtac-aaactttgaatttatta 34284833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 559801 - 559735
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  559801 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 559735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 3850299 - 3850233
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3850299 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 3850233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 18593610 - 18593676
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18593610 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 18593676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 20791620 - 20791554
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20791620 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 20791554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 24046560 - 24046626
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24046560 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 24046626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 543 - 608
Target Start/End: Original strand, 33945824 - 33945889
Alignment:
Q  543 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33945824 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 33945889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 28472295 - 28472229
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28472295 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 28472229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 32244451 - 32244385
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32244451 agttctacagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 32244385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 5414562 - 5414628
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  5414562 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttttaatttatta 5414628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 6018577 - 6018640
Alignment:
Q  545 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  6018577 tctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttaaatttatta 6018640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 545 - 608
Target Start/End: Complemental strand, 6833622 - 6833559
Alignment:
Q  545 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6833622 tctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 6833559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 29043281 - 29043219
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  29043281 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacataactttgaattt 29043219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 34207003 - 34207069
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  34207003 agttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaattttgaatttatta 34207069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 34247755 - 34247821
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  34247755 agttctaaagttatttttaagttaaaagttgtttgaaaaaatattgtacaaaactttgaatttatta 34247821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 10945781 - 10945717
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||| | ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  10945781 ttctaaagttatttctaagttaaaagttgtttggcaaaatattatacaaaactttgaatttatta 10945717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7541179 - 7541113
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| || |||||||||    
T  7541179 agttctaaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaacattcaatttatta 7541113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 24162866 - 24162800
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||| ||||||| |||||||||||||    
T  24162866 agttctaaagttatttttaagtaaaaagttgtttggcaaaatattatacaaaattttgaatttatta 24162800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 17505560 - 17505496
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 606  Q
    |||||||||||||||||| ||||||||| ||||||  |||||||| |||||||||||||||||||    
T  17505560 agttctaaagttatttttaagttaaaagttgtttgataaaatattatacaaaactttgaatttat 17505496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 19988964 - 19988908
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttt 598  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  19988964 agttctaaagttatttttaagttaaaagttgtgtggcaaaatattgtacaaaacttt 19988908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 173062 - 173128
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| ||||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  173062 agttctaaaattatttttaagttaaaagttgtttgacaaaatattatacaaaactttgtatttatta 173128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 29859483 - 29859417
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||  |||||||| ||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  29859483 agttctaagcttatttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttatta 29859417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 8867037 - 8866971
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||||| ||||||||| |||||||||||||||||||  || ||||||||||||||    
T  8867037 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtatgaagctttgaatttatta 8866971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 3053915 - 3053980
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||| ||||||| |||||||||    
T  3053915 agttttaaagctatttttaagttaaatgttgtttggcaaaatattgtac-aaactttaaatttatta 3053980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 547 - 608
Target Start/End: Complemental strand, 18314074 - 18314014
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||| | ||||| | ||| |||||||||||||||| |||||||||||||||||    
T  18314074 taaagttatttttaatttaaatgttgtgtggcaaaatattgtac-aaactttgaatttatta 18314014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 28231075 - 28231136
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||| |||||||| |||| ||||||| | |||||||||||||||||| | |||||||||||||    
T  28231075 agttttaaagttacttttaagttaaatgttgtttggcaaaatattgtgc-aaactttgaattt 28231136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 247462 - 247426
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  247462 tgtttggcaaaatattgtac-aaactttgaatttatta 247426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 12582487 - 12582523
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  12582487 tgtttggcaaaatattgtac-aaactttgaatttatta 12582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 29976359 - 29976322
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  29976359 tgtttggaaaaatattgtacaaaactttaaatttatta 29976322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 2475274 - 2475340
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2475274 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 2475340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 6928360 - 6928426
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6928360 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 6928426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 31884665 - 31884731
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31884665 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 31884731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 25821295 - 25821231
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25821295 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 25821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 24027863 - 24027926
Alignment:
Q  545 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24027863 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 24027926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 16050774 - 16050840
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16050774 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaaattatta 16050840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 24759054 - 24758988
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24759054 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttatta 24758988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 26379286 - 26379220
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26379286 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttatta 26379220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 27176476 - 27176542
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27176476 agttctaaagttatttttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttatta 27176542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 31939835 - 31939901
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31939835 agttctaaagttatttttgagttaaaagcagtttggcaaaatattgtacaaaactttgaatttatta 31939901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 42110760 - 42110694
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42110760 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 42110694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 665562 - 665628
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  665562 agttctaaagttatttttgagttaaaagctgttcggcaaaatattatacaaaactttgaatttatta 665628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 2530157 - 2530091
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2530157 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 2530091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 4374857 - 4374923
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  4374857 agttctaaagttatttttgagttaaaagttgtttggcaagatattgtacaaaactttgaatttatta 4374923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 32261715 - 32261781
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  32261715 agttctaaagttatttttgagttaaaagctgtttgataaaatattgtacaaaactttgaatttatta 32261781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 40308412 - 40308346
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  40308412 agttctaaagttatttttaagttaaaagctgtttggcaaaatagtgtacaaaactttgaatttatta 40308346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 42322948 - 42322882
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  42322948 agttctaaagttatttttgagttaaaagctgtttcgtaaaatattgtacaaaactttgaatttatta 42322882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 3297827 - 3297891
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3297827 ttctaaagttatttttgagttaaaagctgtttggcaaaataatgtataaaactttgaatttatta 3297891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 5589467 - 5589531
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 606  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  5589467 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttat 5589531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 789026 - 789092
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  789026 agttctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 789092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 28746318 - 28746384
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  28746318 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtataaaactttgaatttatta 28746384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 36083866 - 36083804
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  36083866 agttctaaagttatttttaagctaaaagctgtttggcaaaatattgtacaaaactttgaattt 36083804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 39803853 - 39803919
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  39803853 agttctaaagttatttttaagttaaacgttgtttggcaaaatattgtacaaaactttgaatttatta 39803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 43396592 - 43396526
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  43396592 agttctaaagttatttttaagttagaagttgtttggcaaaatattgtacaaaactttgaatttatta 43396526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 542 - 602
Target Start/End: Complemental strand, 15976554 - 15976494
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaat 602  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15976554 agttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaatctttgaat 15976494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 600
Target Start/End: Complemental strand, 19361722 - 19361664
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  19361722 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttga 19361664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 29383727 - 29383793
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  29383727 agttctatagttatttttgagttaaaagctgtttgacaaaacattgtaaaaaactttgaatttatta 29383793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 37147139 - 37147077
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  37147139 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttcgaattt 37147077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 42111809 - 42111875
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42111809 agttataaagttattgttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 42111875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 608
Target Start/End: Complemental strand, 10042863 - 10042798
Alignment:
Q  543 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||| ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10042863 gttctgaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttatta 10042798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 36088648 - 36088584
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  36088648 ttctaaagttatttttaagtaaaaagctgtttgacaaaatattgttcaaaactttgaatttatta 36088584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 40506804 - 40506868
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  40506804 ttcttaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttatta 40506868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 42416870 - 42416806
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||| |||||  |||||||||||||||||||||||||||||||    
T  42416870 ttctaaagttatttttaagttaaaagttgtttcacaaaatattgtacaaaactttgaatttatta 42416806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 790061 - 790127
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||  |||||||||||||||||| |||||||||||    
T  790061 agttctaaagttatttttaagttaaaagttgtttgaaaaaatattgtacaaaactatgaatttatta 790127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 3246901 - 3246835
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| || |||||||||    
T  3246901 agttctaaagttatttttaagttacaagttgtttggcaaaatattgtacaaaacattaaatttatta 3246835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 7536717 - 7536655
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| ||||||||    
T  7536717 agttctaaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaacattgaattt 7536655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 8314901 - 8314835
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| ||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  8314901 agttctaaaattatttttaagttaaaagttgttttgcaaaatattatacaaaactttgaatttatta 8314835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 29874668 - 29874734
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| |||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  29874668 agttctatagttatttttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttatta 29874734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 16166292 - 16166354
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||| |||||||| ||||||||| | |||| |||||||||||||||||||||||||||    
T  16166292 agttctaaaattatttttaagttaaaagttatttgacaaaatattgtacaaaactttgaattt 16166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 19270977 - 19270911
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||    
T  19270977 agttttaaagctatttttaagttaaaggttgtttggcaaaatattatacaaaactttgaatttatta 19270911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 547 - 608
Target Start/End: Original strand, 28990943 - 28991005
Alignment:
Q  547 taaagttatttttgagttaaaa-gctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||| ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  28990943 taaagctattttttagttaaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 28991005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 542 - 603
Target Start/End: Original strand, 35380505 - 35380566
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatt 603  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||| |||||||| |||||||    
T  35380505 agttctaaagttaattttaagttaaaagttgtttggcaaaatattatacaaaacattgaatt 35380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 29382576 - 29382628
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaa 594  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  29382576 agttctaaagttatttttaagttaaaagttgtttggcaaaatatagtacaaaa 29382628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 608
Target Start/End: Original strand, 31958390 - 31958449
Alignment:
Q  548 aaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  31958390 aaagttatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatttatta 31958449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 14720252 - 14720186
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||||| || || ||| ||||||| ||||||||||||||||||||||||||||||    
T  14720252 agttttaaagctatttttaagatagaagttgtttgggaaaatattgtacaaaactttgaatttatta 14720186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 547 - 597
Target Start/End: Original strand, 15875756 - 15875806
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  15875756 taaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaactt 15875806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 30503532 - 30503598
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||  | ||| |||||||||||||||||| ||| |||||||||    
T  30503532 agttctaaagttatttttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttatta 30503598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 30543875 - 30543941
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||  | ||| |||||||||||||||||| ||| |||||||||    
T  30543875 agttctaaagttatttttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttatta 30543941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 14205485 - 14205433
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaa 594  Q
    |||||||||||||||||| | ||||||| |||||||||||||||| |||||||    
T  14205485 agttctaaagttatttttaatttaaaagttgtttggcaaaatattatacaaaa 14205433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 2001561 - 2001506
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| ||||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  2001561 agttttaaagttatttttaagttaaaagttgtttggtaaaatactgtacaaaactt 2001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 550 - 608
Target Start/End: Complemental strand, 1060768 - 1060711
Alignment:
Q  550 agttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||| ||||||||  |||||| ||||||||||||| |||||||||||||||||    
T  1060768 agttatttttaagttaaaaattgtttgacaaaatattgtac-aaactttgaatttatta 1060711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 30503759 - 30503800
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaat 583  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  30503759 agttctaaagttatttttaagttaaaagttgtttggcaaaat 30503800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 30544102 - 30544143
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaat 583  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  30544102 agttctaaagttatttttaagttaaaagttgtttggcaaaat 30544143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 589
Target Start/End: Complemental strand, 39783024 - 39782983
Alignment:
Q  548 aaagttatttttgagttaaaagctgtttggcaaaatattgta 589  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  39783024 aaagttatttttcagttaaaagttgtttggcaaaatattgta 39782983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 597
Target Start/End: Original strand, 36515058 - 36515113
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| |||| |||||||  ||||||||| |||||||||||||| ||||||||||||    
T  36515058 agttttaaaattattttaaagttaaaagttgtttggcaaaataatgtacaaaactt 36515113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 604
Target Start/End: Complemental strand, 43354573 - 43354523
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  43354573 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaattt 43354523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 3213231 - 3213296
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||||  ||||||| | |||||| ||||||||||||| |||||||||||||||||    
T  3213231 agttttaaagctattttaaagttaaatgttgtttgacaaaatattgtac-aaactttgaatttatta 3213296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 554 - 604
Target Start/End: Complemental strand, 28869413 - 28869363
Alignment:
Q  554 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||| ||||||||| |||||| ||||||||||||||||| ||| |||||    
T  28869413 atttttaagttaaaagttgtttgacaaaatattgtacaaaaatttaaattt 28869363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 28887228 - 28887195
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||||||||||||| |||||    
T  28887228 tgtttggcaaaatattgtacaaaactttaaattt 28887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 37461914 - 37461878
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37461914 tgtttggcaaaatattgtac-aaactttgaatttatta 37461878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 604
Target Start/End: Complemental strand, 2463683 - 2463651
Alignment:
Q  572 gtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||| |||||||||||||||||||||||||||    
T  2463683 gtttgacaaaatattgtacaaaactttgaattt 2463651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 600
Target Start/End: Complemental strand, 36242381 - 36242337
Alignment:
Q  556 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||| ||||||||  ||||||| ||||||||||||||||||||||    
T  36242381 ttttaagttaaaacttgtttggtaaaatattgtacaaaactttga 36242337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 29500407 - 29500341
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29500407 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 29500341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 30269084 - 30269150
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30269084 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 30269150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 45599267 - 45599333
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45599267 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 45599333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 54510387 - 54510453
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54510387 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 54510453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 52461102 - 52461038
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52461102 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 52461038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 4018991 - 4018925
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4018991 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttatta 4018925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 14587387 - 14587453
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14587387 agttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 14587453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 20849404 - 20849470
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20849404 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 20849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 53022741 - 53022675
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  53022741 agttctaaagttatttttgagttaaaagctgtttggcgaaatattgtacaaaactttgaatttatta 53022675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7040956 - 7040890
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7040956 agttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 7040890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 13450347 - 13450281
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13450347 agttctaaaattatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttatta 13450281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 26881696 - 26881630
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  26881696 agttctaaagttatttttgagttaaaaactgtttggcaaaatattttacaaaactttgaatttatta 26881630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 33932486 - 33932552
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33932486 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtataaaactttgaatttatta 33932552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 36592216 - 36592282
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  36592216 agttctaaagttatttttgagttaaaaactgtttgtcaaaatattgtacaaaactttgaatttatta 36592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 39721334 - 39721268
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39721334 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 39721268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 43316516 - 43316582
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43316516 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 43316582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 48545184 - 48545118
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  48545184 agttctaaagttatttttgagttaaaagctgtttgacaaaatatcgtacaaaactttgaatttatta 48545118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 54741878 - 54741812
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  54741878 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttaaatttatta 54741812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 2909505 - 2909441
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2909505 ttctaaagttatttttgagttaaaagctgtttgacaaaatattatacaaaactttgaatttatta 2909441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 29450732 - 29450668
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  29450732 ttctaaagttatttttgggttaaaagctgtttagcaaaatattgtacaaaactttgaatttatta 29450668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 44762725 - 44762789
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44762725 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 44762789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 22347079 - 22347146
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggc-aaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22347079 agttctaaagttatttttgagttaaaagctgtttagcaaaaatattgtacaaaactttgaatttatta 22347146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7265130 - 7265064
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  7265130 agttctaaagttatttttgagttaaaagcagtttgacaaattattgtacaaaactttgaatttatta 7265064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 12101464 - 12101530
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  12101464 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttatta 12101530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 19536782 - 19536716
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  19536782 agttctaaagttatttttgaattaaaagttgtttggcaaaatattgtataaaactttgaatttatta 19536716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 35690212 - 35690278
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  35690212 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttatta 35690278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 38361825 - 38361759
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  38361825 agttctaaagttatttttaagttaaaagttgtttggcagaatattgtacaaaactttgaatttatta 38361759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 46090118 - 46090184
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46090118 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 46090184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 46757633 - 46757568
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  46757633 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgta-taaactttgaatttatta 46757568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 50739229 - 50739163
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  50739229 agttctaaagttatttttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttatta 50739163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 50773626 - 50773692
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  50773626 agttctaaagttatttttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttatta 50773692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 546 - 608
Target Start/End: Complemental strand, 52674853 - 52674792
Alignment:
Q  546 ctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52674853 ctaaagttatttttgagttaaaa-ctgtttggcaaaatattgtacaaaactttgaatttatta 52674792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 36987740 - 36987800
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  36987740 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 36987800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 37013179 - 37013239
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  37013179 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 37013239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 47719557 - 47719493
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  47719557 ttctaaagttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaatttatta 47719493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 41990764 - 41990830
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  41990764 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtaccaaactttaaatttatta 41990830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 48961192 - 48961128
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  48961192 ttctaaagttatttttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttatta 48961128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 13337173 - 13337108
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  13337173 agttctaaagttatttttaagttaaa-gttgtttggcaaaatatcgtacaaaactttgaatttatta 13337108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 15496470 - 15496532
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||    
T  15496470 agttctaaagttatttttaagctataagttgtttggcaaaatattgtacaaaactttgaattt 15496532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 37413644 - 37413578
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  37413644 agttataaagttatttttaagttacaagttgtttggcaaaatattgtacaaaattttgaatttatta 37413578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 42187749 - 42187815
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||  |||||||||    
T  42187749 agttataaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttaaaatttatta 42187815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 46850711 - 46850777
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  46850711 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtacaaacctttgaatttatta 46850777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 54113487 - 54113421
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  54113487 agttataaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttatta 54113421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 54203746 - 54203812
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||||||||| || |||||||||    
T  54203746 agttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaacattaaatttatta 54203812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 20996334 - 20996396
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| | ||||||| |||||| ||||||||||||||||| |||||||||    
T  20996334 agttctaaagttatttttaaattaaaagttgtttgtcaaaatattgtacaaaattttgaattt 20996396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 46088720 - 46088782
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||||||||||||||||| |||||    
T  46088720 agttctaaagttatttttaagtgaaaagttgtttggaaaaatattgtacaaaacttttaattt 46088782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 50933279 - 50933213
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| |||||||||||||||  ||||||||||||||||| ||| |||||||||    
T  50933279 agttataaagttatttttaagttaaaagctgtttaacaaaatattgtacaaaaatttaaatttatta 50933213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 563 - 607
Target Start/End: Complemental strand, 875884 - 875840
Alignment:
Q  563 ttaaaagctgtttggcaaaatattgtacaaaactttgaatttatt 607  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  875884 ttaagagctgtttggcaaaatattgtacaaaactttgaatttatt 875840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 608
Target Start/End: Original strand, 12996818 - 12996877
Alignment:
Q  548 aaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  12996818 aaagttatttttaagttaaaagttgtttggaaaaatattgtac-aaactttgaatttatta 12996877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 602
Target Start/End: Complemental strand, 33899902 - 33899842
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaat 602  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||    
T  33899902 agttataaagttatttttaagttaaaagttgtttggcaaaatattttacgaaactttgaat 33899842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 35906684 - 35906750
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| | ||||||| || ||| |||||||||||||||||||||||||| ||||    
T  35906684 agttctaaaattatttttaaattaaaagttggttgacaaaatattgtacaaaactttgaattgatta 35906750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 10617684 - 10617639
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaacttt 598  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  10617684 tatttttaagttaaaagttgtttggcaaaatattgtacaaaacttt 10617639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 8238972 - 8238921
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaa 593  Q
    |||| ||||||||||||| ||||||| | |||||||||||||||||||||||    
T  8238972 agttttaaagttatttttaagttaaatgttgtttggcaaaatattgtacaaa 8238921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 600
Target Start/End: Complemental strand, 54835790 - 54835743
Alignment:
Q  553 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  54835790 tatttttaagttaaaagttgtttggcaaaatattgtacaaaattttga 54835743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 54195682 - 54195748
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||| || |||||||| ||||||||  | |||| ||||||||||||||||| |||||||||||||    
T  54195682 agttctgaaattatttttaagttaaaaattatttgacaaaatattgtacaaaattttgaatttatta 54195748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 44075414 - 44075450
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  44075414 tgtttggcaaaatattgtac-aaactttgaatttatta 44075450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 971028 - 970962
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  971028 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 970962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 1835760 - 1835694
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1835760 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 1835694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 5166341 - 5166275
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5166341 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 5166275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7233098 - 7233032
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7233098 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 7233032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7274745 - 7274679
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7274745 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 7274679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 8878194 - 8878128
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8878194 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 8878128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 18166833 - 18166899
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18166833 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 18166899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 24926085 - 24926151
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24926085 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 24926151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 31972357 - 31972291
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31972357 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 31972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 36085947 - 36086013
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36085947 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 36086013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 4631281 - 4631217
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4631281 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 4631217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 8683734 - 8683668
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8683734 agttctaaagttatttttgagttaaaagctgtttggcaaaaaattgtacaaaactttgaatttatta 8683668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 3243295 - 3243361
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3243295 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 3243361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 3324264 - 3324330
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  3324264 agttctaaagttatttttgagttaaaagctgtttcgcaaaatattatacaaaactttgaatttatta 3324330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 608
Target Start/End: Complemental strand, 34912724 - 34912660
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34912724 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 34912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 36078556 - 36078622
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  36078556 agttctaaagttatttttaagttaaaaggtgtttgacaaaatattgtacaaaactttgaatttatta 36078622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 38879211 - 38879145
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  38879211 agttctaaagttatttttaagttaaaagttgtttggcaaaatattttacaaaactttgaatttatta 38879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 3079792 - 3079726
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  3079792 agttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttatta 3079726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 10120684 - 10120618
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  10120684 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttatta 10120618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 40202290 - 40202224
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  40202290 agttctaaagttatttttaagttaaaagttgttaggcaaaatattgtacaaaactttaaatttatta 40202224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 41452890 - 41452828
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  41452890 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttaaattt 41452828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 45474797 - 45474735
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  45474797 agttctaaatttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 45474735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 668294 - 668360
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||| |||||| |||||||||||||    
T  668294 agttctaaagttatttttaaattaaaagttgtttggcaaaatattgcacaaaattttgaatttatta 668360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 17032813 - 17032875
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  17032813 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttggaattt 17032875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 588
Target Start/End: Original strand, 20313248 - 20313294
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgt 588  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20313248 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgt 20313294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 35423861 - 35423795
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  35423861 agttcttaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaactttaaatttatta 35423795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 38709765 - 38709708
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  38709765 taaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaattt 38709708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 600
Target Start/End: Complemental strand, 2180093 - 2180035
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||    
T  2180093 agttctaaagttatttttaagttaaaagttgttttgcaaaatattatacaaaactttga 2180035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 1118055 - 1117987
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtaca--aaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||   ||||||||||||||||    
T  1118055 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacatgtaactttgaatttatta 1117987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 547 - 608
Target Start/End: Original strand, 9799330 - 9799391
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||| ||||| ||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  9799330 taaagttgtttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttatta 9799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 38959644 - 38959687
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatat 585  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  38959644 agttctaaaattatttttgagttaaaagctgtttgacaaaatat 38959687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 550 - 607
Target Start/End: Complemental strand, 37522763 - 37522706
Alignment:
Q  550 agttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatt 607  Q
    |||||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||    
T  37522763 agttatttttaagttaaaatttgtttggcaaaatgttgtacaaaattttgattttatt 37522706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 3708496 - 3708460
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  3708496 tgtttggcaaaatattgtac-aaactttgaatttatta 3708460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 11868920 - 11868956
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  11868920 tgtttggcaaaatattgtac-aaactttgaatttatta 11868956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 17051167 - 17051204
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  17051167 tgtttggcaaaatattgtacaaaacatagaatttatta 17051204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 35360313 - 35360349
Alignment:
Q  571 tgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35360313 tgtttggcaaaatattgtac-aaactttgaatttatta 35360349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 11583231 - 11583165
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11583231 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 11583165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 17585590 - 17585524
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17585590 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 17585524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 25659810 - 25659876
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25659810 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 25659876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 33373820 - 33373886
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33373820 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 33373886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 33642685 - 33642619
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33642685 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 33642619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 33895217 - 33895283
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33895217 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 33895283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 39327043 - 39327109
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39327043 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 39327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 41901700 - 41901766
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41901700 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 41901766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 45104255 - 45104189
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45104255 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 45104189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 47037131 - 47037197
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47037131 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 47037197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 543 - 608
Target Start/End: Original strand, 43120780 - 43120845
Alignment:
Q  543 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43120780 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 43120845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 3265191 - 3265125
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3265191 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtataaaactttgaatttatta 3265125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7833620 - 7833554
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7833620 agttctaaagttatttttgagttaaaaactgtttggcaaaatattgtacaaaactttgaatttatta 7833554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 9574936 - 9574870
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9574936 agttctaaagttatttttgagttaaaagctgttcggcaaaatattgtacaaaactttgaatttatta 9574870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 11754228 - 11754294
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11754228 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 11754294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 14487324 - 14487390
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14487324 agttctaaagttatttttgagttaaaagctgtttggaaaaatattgtacaaaactttgaatttatta 14487390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 33818094 - 33818160
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33818094 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 33818160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 33831925 - 33831991
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33831925 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttatta 33831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 33877562 - 33877628
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33877562 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta 33877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 33894087 - 33894153
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33894087 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttatta 33894153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 36165521 - 36165587
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36165521 agttctaaagttatttttgagttaaaagctttttggcaaaatattgtacaaaactttgaatttatta 36165587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 38802380 - 38802314
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38802380 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttatta 38802314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 547 - 608
Target Start/End: Original strand, 40432208 - 40432269
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40432208 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 40432269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 24473551 - 24473617
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24473551 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 24473617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 43119114 - 43119180
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43119114 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 43119180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 43123113 - 43123051
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43123113 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 43123051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 46588091 - 46588157
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  46588091 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatataaaactttgaatttatta 46588157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 17249110 - 17249044
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  17249110 agttctaaagttatttttaagctaaaagctgtttggcaaaatattgtacaaaactttgattttatta 17249044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 608
Target Start/End: Original strand, 36952714 - 36952779
Alignment:
Q  543 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36952714 gttctaaatttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 36952779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 601
Target Start/End: Complemental strand, 16097417 - 16097358
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaa 601  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16097417 agttctaaaattatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaa 16097358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 39879140 - 39879206
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  39879140 agttctaaagttatttttaagttaaaagttgtttggcaaaatattttacaaaacattgaatttatta 39879206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 46040486 - 46040552
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  46040486 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaattttgaatttatta 46040552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 604
Target Start/End: Complemental strand, 34078355 - 34078295
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  34078355 ttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaactttgaattt 34078295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 1322525 - 1322591
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| | ||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  1322525 agttctaaagttatttttaaattaaaagttgtttggtaaaatattgtacaaaacattgaatttatta 1322591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 17366355 - 17366411
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  17366355 ttctaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaactttga 17366411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 18091348 - 18091283
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  18091348 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaatttatta 18091283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 550 - 608
Target Start/End: Complemental strand, 34652341 - 34652283
Alignment:
Q  550 agttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  34652341 agttatttttaagttaaaagttgtttgacaaaatattgtacaaaattttgaatttatta 34652283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 7308331 - 7308383
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaa 594  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  7308331 agttctaatgttatttttaagttaaaagttgtttggcaaaatattgtacaaaa 7308383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 552 - 608
Target Start/End: Original strand, 31638425 - 31638481
Alignment:
Q  552 ttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  31638425 ttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaattaatta 31638481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 39729206 - 39729262
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||||||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  39729206 ttctaaagttatttttaagttaaaagttgtttcacaaaatattgtacaaaactttga 39729262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 607
Target Start/End: Original strand, 23730301 - 23730359
Alignment:
Q  548 aaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatt 607  Q
    |||||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||    
T  23730301 aaagttatttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaaattatt 23730359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 31215864 - 31215907
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatat 585  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  31215864 agttctaaagttatttttgagttaaaagttgtttggcaaaatat 31215907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 31221619 - 31221662
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatat 585  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  31221619 agttctaaagttatttttgagttaaaagttgtttggcaaaatat 31221662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 11606467 - 11606533
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||| ||||| ||||| | | ||||||| |||||||||||||||||||||||||||| |||||||||    
T  11606467 agttttaaagctatttctaaattaaaagttgtttggcaaaatattgtacaaaactttaaatttatta 11606533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 598
Target Start/End: Complemental strand, 33932988 - 33932934
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttt 598  Q
    |||||||||||||||| | ||||||| |||||||||||||||  |||||||||||    
T  33932988 ttctaaagttatttttaaattaaaagttgtttggcaaaatatcatacaaaacttt 33932934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 593
Target Start/End: Original strand, 28568754 - 28568805
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaa 593  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  28568754 agttttaaagatatttttaagttaaatgttgtttggcaaaatattgtacaaa 28568805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 602
Target Start/End: Original strand, 44065455 - 44065502
Alignment:
Q  555 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaat 602  Q
    ||||| ||||||||| ||||||||| ||||||||||||| ||||||||    
T  44065455 tttttaagttaaaagttgtttggcacaatattgtacaaagctttgaat 44065502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 547 - 593
Target Start/End: Complemental strand, 17670055 - 17670009
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaa 593  Q
    |||||||| |||| ||||||| | |||||||||||||||||||||||    
T  17670055 taaagttacttttaagttaaatgttgtttggcaaaatattgtacaaa 17670009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 43124424 - 43124366
Alignment:
Q  546 ctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||| ||||||||| ||||||||  |||||||||||||||| || |||| |||||||||    
T  43124424 ctaaggttatttttaagttaaaatttgtttggcaaaatattatataaaaatttgaattt 43124366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 49571276 - 49571214
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||||||||||||||||  |||| ||  |||||| || |||||||||||||||||| |||||    
T  49571276 agttctaaagttatttttatgttataatttgtttgacacaatattgtacaaaactttaaattt 49571214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 49223219 - 49223163
Alignment:
Q  547 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    ||||| ||||||| ||||||| | |||||| ||||||||||||| |||||||||||||    
T  49223219 taaagctatttttaagttaaatgttgtttgacaaaatattgtac-aaactttgaattt 49223163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 4512 - 4578
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4512 agttctaaagttatttttgagttaaaagctgtttggccaaatattgtacaaaactttgaatttatta 4578  T

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Target: scaffold0481; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 7522 - 7456
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7522 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttagaatttatta 7456  T

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Target: scaffold0178 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 7292 - 7358
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7292 agttctaaagttatttttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttatta 7358  T

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Target: scaffold0166 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 1548 - 1482
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1548 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttatta 1482  T

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Target: scaffold0024 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 90463 - 90527
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  90463 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 90527  T

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Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 110529 - 110585
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttga 600  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||  |||||||||    
T  110529 ttctaaagttatttttaagttaaaagttgtttagcaaaatattgtaagaaactttga 110585  T

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Target: scaffold0198 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 15261 - 15327
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15261 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 15327  T

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Target: scaffold0244 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 608
Target Start/End: Original strand, 7574 - 7640
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7574 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttatta 7640  T

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Target: scaffold0768 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 6306 - 6369
Alignment:
Q  545 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6306 tctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttatta 6369  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 138031 - 138091
Alignment:
Q  544 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||| |||| |||||||||||    
T  138031 ttctaaagttatttttaagttaaaagttgtttagcaaaatattgcacaagactttgaattt 138091  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 229156 - 229101
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| ||||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  229156 agttttaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaactt 229101  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 608
Target Start/End: Complemental strand, 132730 - 132665
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta 608  Q
    |||||||||||||||||| | ||||||| |||||||||||||||||||  ||||||| |||||||||    
T  132730 agttctaaagttatttttaatttaaaagttgtttggcaaaatattgta-taaactttcaatttatta 132665  T

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Target: scaffold0318 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 1127 - 1072
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactt 597  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||| | ||||||||    
T  1127 agttttaaagttatttttaagttaaaagttgtttggcaaaatatttttcaaaactt 1072  T

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Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 602
Target Start/End: Original strand, 5732 - 5793
Alignment:
Q  542 agttctaaagttattt-ttgagttaaaagctgtttggcaaaatattgtacaaaactttgaat 602  Q
    |||| ||||||||||| || ||||||||| |||||| ||| |||||||||||||||||||||    
T  5732 agttttaaagttatttattaagttaaaagttgtttgacaagatattgtacaaaactttgaat 5793  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 31572 - 31633
Alignment:
Q  542 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaattt 604  Q
    |||| |||||||| |||| ||||||| | |||||||||||||||||| | |||||||||||||    
T  31572 agttttaaagttacttttaagttaaatgttgtttggcaaaatattgtgc-aaactttgaattt 31633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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