View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4483_low_16 (Length: 233)

Name: NF4483_low_16
Description: NF4483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4483_low_16
NF4483_low_16
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-191)||(10365-10555)
[»] chr1 (30 HSPs)
chr1 (9-191)||(52927806-52927988)
chr1 (5-182)||(33681118-33681295)
chr1 (26-233)||(16368068-16368275)
chr1 (1-186)||(22237734-22237920)
chr1 (1-233)||(21861351-21861584)
chr1 (1-233)||(21896040-21896270)
chr1 (6-233)||(50686725-50686952)
chr1 (35-233)||(12271695-12271886)
chr1 (51-229)||(21754192-21754370)
chr1 (4-186)||(20248386-20248567)
chr1 (4-229)||(20918711-20918936)
chr1 (6-183)||(22921701-22921878)
chr1 (26-233)||(50613898-50614104)
chr1 (26-233)||(50621726-50621932)
chr1 (26-207)||(41049843-41050024)
chr1 (1-186)||(20636956-20637140)
chr1 (6-186)||(35981517-35981696)
chr1 (6-186)||(49261452-49261631)
chr1 (4-81)||(22130844-22130921)
chr1 (1-80)||(1924896-1924975)
chr1 (4-75)||(14295495-14295565)
chr1 (1-80)||(20923910-20923989)
chr1 (4-75)||(51130671-51130741)
chr1 (1-80)||(41387815-41387894)
chr1 (6-72)||(16093826-16093892)
chr1 (99-161)||(16381389-16381451)
chr1 (4-80)||(35261015-35261092)
chr1 (146-230)||(43697623-43697708)
chr1 (1-80)||(433113-433193)
chr1 (26-82)||(16758783-16758839)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-186)||(130012-130197)
[»] chr3 (40 HSPs)
chr3 (1-182)||(16097435-16097616)
chr3 (6-186)||(49389459-49389639)
chr3 (6-186)||(16103891-16104071)
chr3 (4-233)||(13210110-13210341)
chr3 (52-233)||(43927291-43927472)
chr3 (26-198)||(37250984-37251156)
chr3 (59-186)||(12934141-12934268)
chr3 (51-182)||(1644517-1644648)
chr3 (51-229)||(32307824-32308003)
chr3 (58-229)||(49667870-49668042)
chr3 (1-186)||(15471031-15471215)
chr3 (51-182)||(9513064-9513195)
chr3 (57-182)||(9521045-9521170)
chr3 (28-233)||(22110133-22110338)
chr3 (6-125)||(12174152-12174271)
chr3 (1-186)||(14234594-14234781)
chr3 (6-186)||(1465240-1465419)
chr3 (141-224)||(17672869-17672952)
chr3 (141-198)||(324481-324538)
chr3 (1-80)||(23413186-23413265)
chr3 (129-186)||(12171935-12171992)
chr3 (1-80)||(8489232-8489311)
chr3 (1-80)||(19776028-19776107)
chr3 (6-80)||(24340657-24340732)
chr3 (1-80)||(37439403-37439482)
chr3 (6-80)||(37642199-37642274)
chr3 (6-76)||(2051137-2051208)
chr3 (1-80)||(4107164-4107243)
chr3 (1-80)||(4111016-4111095)
chr3 (143-186)||(12340000-12340043)
chr3 (143-229)||(14665853-14665940)
chr3 (143-229)||(14735366-14735453)
chr3 (1-80)||(15965232-15965311)
chr3 (1-80)||(15969156-15969235)
chr3 (1-80)||(15973080-15973159)
chr3 (1-80)||(16749761-16749840)
chr3 (6-72)||(22147467-22147534)
chr3 (6-76)||(52523665-52523736)
chr3 (154-233)||(606150-606229)
chr3 (1-45)||(16750390-16750434)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-233)||(8573-8808)
scaffold0621 (6-186)||(6647-6826)
[»] chr5 (25 HSPs)
chr5 (1-179)||(21565649-21565827)
chr5 (19-233)||(20026722-20026936)
chr5 (4-186)||(19669005-19669189)
chr5 (4-229)||(19660624-19660849)
chr5 (4-186)||(22959364-22959546)
chr5 (6-189)||(26011861-26012044)
chr5 (1-186)||(21329326-21329511)
chr5 (6-233)||(22178001-22178228)
chr5 (1-191)||(21501978-21502170)
chr5 (98-233)||(25743924-25744059)
chr5 (91-186)||(21741374-21741469)
chr5 (98-174)||(27988770-27988846)
chr5 (1-80)||(21871507-21871586)
chr5 (1-80)||(21875787-21875866)
chr5 (26-233)||(15796553-15796760)
chr5 (6-62)||(21741486-21741541)
chr5 (1-80)||(10753624-10753703)
chr5 (1-80)||(22120131-22120210)
chr5 (143-229)||(24767123-24767210)
chr5 (6-80)||(40725965-40726040)
chr5 (143-229)||(22119979-22120066)
chr5 (6-80)||(22144161-22144236)
chr5 (16-75)||(36314670-36314728)
chr5 (1-66)||(24767287-24767352)
chr5 (6-82)||(29448116-29448192)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-233)||(53330-53563)
scaffold0075 (143-229)||(8080-8167)
[»] chr4 (30 HSPs)
chr4 (1-233)||(13632-13865)
chr4 (1-182)||(8846479-8846660)
chr4 (7-233)||(53081932-53082159)
chr4 (51-229)||(12774154-12774333)
chr4 (19-233)||(12287991-12288205)
chr4 (26-232)||(46640239-46640444)
chr4 (12-233)||(16596763-16596984)
chr4 (1-190)||(43198380-43198567)
chr4 (4-186)||(15551924-15552105)
chr4 (23-186)||(39706118-39706281)
chr4 (6-186)||(15099461-15099640)
chr4 (6-186)||(15190428-15190607)
chr4 (1-80)||(630710-630789)
chr4 (77-173)||(14164732-14164827)
chr4 (1-80)||(3331991-3332070)
chr4 (1-80)||(14953897-14953976)
chr4 (143-229)||(22633999-22634086)
chr4 (1-80)||(25690167-25690246)
chr4 (1-66)||(13812759-13812824)
chr4 (77-173)||(14158027-14158122)
chr4 (141-233)||(16043259-16043351)
chr4 (1-80)||(10713113-10713192)
chr4 (1-80)||(10926883-10926962)
chr4 (143-186)||(13812639-13812682)
chr4 (143-233)||(13844786-13844877)
chr4 (1-80)||(15225338-15225417)
chr4 (143-229)||(24028989-24029076)
chr4 (1-75)||(12487971-12488045)
chr4 (35-80)||(52243128-52243173)
chr4 (36-80)||(15791916-15791960)
[»] chr7 (32 HSPs)
chr7 (1-233)||(15116587-15116819)
chr7 (1-233)||(15113050-15113282)
chr7 (4-233)||(20219972-20220200)
chr7 (4-186)||(15754718-15754901)
chr7 (4-229)||(11995816-11996041)
chr7 (12-229)||(28505087-28505304)
chr7 (1-191)||(16219541-16219731)
chr7 (6-191)||(16056439-16056624)
chr7 (4-229)||(34200893-34201118)
chr7 (19-195)||(12901449-12901629)
chr7 (6-186)||(67857-68036)
chr7 (6-170)||(18005758-18005922)
chr7 (1-186)||(47831914-47832099)
chr7 (86-191)||(16324197-16324302)
chr7 (1-189)||(22073021-22073210)
chr7 (1-233)||(810912-811145)
chr7 (4-186)||(44014285-44014464)
chr7 (120-186)||(9389526-9389592)
chr7 (4-81)||(14044858-14044935)
chr7 (4-81)||(14354888-14354965)
chr7 (6-80)||(1867929-1868003)
chr7 (143-229)||(9751336-9751423)
chr7 (4-75)||(16495509-16495579)
chr7 (185-233)||(9177447-9177495)
chr7 (1-80)||(18426100-18426179)
chr7 (6-80)||(19486678-19486753)
chr7 (143-186)||(39267476-39267519)
chr7 (1-80)||(39267582-39267661)
chr7 (1-80)||(45169773-45169852)
chr7 (6-80)||(15008433-15008507)
chr7 (6-63)||(9389649-9389705)
chr7 (1-66)||(9751500-9751565)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-186)||(45621-45806)
[»] chr2 (16 HSPs)
chr2 (6-233)||(23791387-23791614)
chr2 (1-233)||(22459343-22459576)
chr2 (10-233)||(25109005-25109228)
chr2 (19-233)||(18786684-18786898)
chr2 (26-198)||(23207410-23207582)
chr2 (51-186)||(22134046-22134181)
chr2 (1-233)||(7514-7747)
chr2 (6-170)||(25175962-25176126)
chr2 (6-233)||(28406089-28406317)
chr2 (12-102)||(23071865-23071955)
chr2 (2-80)||(23708553-23708632)
chr2 (1-80)||(1283687-1283766)
chr2 (1-60)||(7679691-7679750)
chr2 (1-80)||(30344758-30344837)
chr2 (135-229)||(23071749-23071843)
chr2 (6-80)||(20520127-20520201)
[»] scaffold0556 (2 HSPs)
scaffold0556 (4-186)||(6919-7101)
scaffold0556 (1-189)||(8122-8310)
[»] scaffold0001 (3 HSPs)
scaffold0001 (6-187)||(160795-160976)
scaffold0001 (141-222)||(85417-85498)
scaffold0001 (185-233)||(162882-162930)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-233)||(12675-12907)
[»] chr8 (27 HSPs)
chr8 (1-233)||(20498669-20498902)
chr8 (6-232)||(17266775-17267001)
chr8 (6-233)||(22364774-22365001)
chr8 (4-229)||(5866063-5866288)
chr8 (6-233)||(37116461-37116687)
chr8 (12-229)||(17141031-17141248)
chr8 (36-182)||(26355533-26355679)
chr8 (4-233)||(21491102-21491331)
chr8 (6-233)||(24353133-24353363)
chr8 (4-229)||(21249492-21249716)
chr8 (4-226)||(21255330-21255551)
chr8 (1-189)||(6520475-6520662)
chr8 (19-233)||(983184-983401)
chr8 (6-189)||(21285709-21285892)
chr8 (6-191)||(23760665-23760853)
chr8 (6-170)||(38855097-38855260)
chr8 (6-186)||(21673816-21673995)
chr8 (1-80)||(21383917-21383996)
chr8 (36-176)||(2418713-2418852)
chr8 (6-80)||(13508019-13508094)
chr8 (1-80)||(18862412-18862491)
chr8 (1-80)||(21387337-21387416)
chr8 (1-80)||(21411210-21411289)
chr8 (1-80)||(21805702-21805781)
chr8 (1-80)||(21827781-21827860)
chr8 (6-82)||(17439438-17439514)
chr8 (6-80)||(13597551-13597626)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-191)||(1189-1379)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-180)||(22509-22684)
[»] chr6 (35 HSPs)
chr6 (4-229)||(28496260-28496485)
chr6 (4-229)||(29808671-29808896)
chr6 (6-186)||(19652306-19652485)
chr6 (4-186)||(1561410-1561593)
chr6 (27-198)||(19668505-19668676)
chr6 (1-233)||(20109245-20109479)
chr6 (26-233)||(23076864-23077070)
chr6 (26-233)||(35008282-35008488)
chr6 (1-187)||(23019513-23019699)
chr6 (86-233)||(9098307-9098454)
chr6 (91-233)||(22080520-22080663)
chr6 (86-189)||(27333111-27333214)
chr6 (86-189)||(27393851-27393954)
chr6 (36-169)||(18204221-18204354)
chr6 (101-233)||(23527888-23528020)
chr6 (94-191)||(4668038-4668135)
chr6 (94-191)||(4674885-4674982)
chr6 (36-169)||(18177517-18177650)
chr6 (36-169)||(18199261-18199394)
chr6 (36-117)||(28103796-28103877)
chr6 (94-191)||(31155223-31155320)
chr6 (119-191)||(4185648-4185720)
chr6 (6-80)||(8227445-8227520)
chr6 (1-80)||(22949405-22949484)
chr6 (1-80)||(22953361-22953440)
chr6 (1-80)||(23871849-23871928)
chr6 (1-80)||(23875805-23875884)
chr6 (1-80)||(27325370-27325449)
chr6 (91-169)||(23539165-23539243)
chr6 (19-62)||(9098466-9098509)
chr6 (1-80)||(16624590-16624669)
chr6 (1-80)||(16760555-16760634)
chr6 (7-82)||(18706418-18706493)
chr6 (142-191)||(4189203-4189252)
chr6 (1-66)||(21939488-21939553)
[»] scaffold0028 (2 HSPs)
scaffold0028 (51-186)||(132808-132943)
scaffold0028 (6-168)||(62307-62469)
[»] scaffold1984 (1 HSPs)
scaffold1984 (6-182)||(241-416)
[»] scaffold0211 (1 HSPs)
scaffold0211 (51-229)||(28596-28775)
[»] scaffold1351 (1 HSPs)
scaffold1351 (7-233)||(119-345)
[»] scaffold0420 (1 HSPs)
scaffold0420 (6-233)||(6064-6291)
[»] scaffold0138 (2 HSPs)
scaffold0138 (6-233)||(18019-18246)
scaffold0138 (1-191)||(13046-13236)
[»] scaffold0006 (2 HSPs)
scaffold0006 (6-233)||(97119-97344)
scaffold0006 (6-233)||(106397-106622)
[»] scaffold0139 (1 HSPs)
scaffold0139 (6-233)||(38430-38657)
[»] scaffold0022 (2 HSPs)
scaffold0022 (26-220)||(78454-78648)
scaffold0022 (6-233)||(128752-128978)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-233)||(12873-13106)
[»] scaffold0040 (1 HSPs)
scaffold0040 (19-198)||(103455-103634)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-191)||(10634-10824)
[»] scaffold0021 (2 HSPs)
scaffold0021 (24-197)||(136185-136359)
scaffold0021 (24-197)||(144893-145067)
[»] scaffold0261 (1 HSPs)
scaffold0261 (4-229)||(15768-15993)
[»] scaffold1137 (1 HSPs)
scaffold1137 (51-229)||(2088-2267)
[»] scaffold0034 (1 HSPs)
scaffold0034 (6-191)||(32647-32832)
[»] scaffold0507 (1 HSPs)
scaffold0507 (26-233)||(7840-8047)
[»] scaffold0218 (2 HSPs)
scaffold0218 (12-229)||(29066-29286)
scaffold0218 (26-191)||(7900-8062)
[»] scaffold1257 (1 HSPs)
scaffold1257 (6-233)||(1999-2227)
[»] scaffold0046 (2 HSPs)
scaffold0046 (4-191)||(11399-11586)
scaffold0046 (4-133)||(2104-2233)
[»] scaffold0161 (1 HSPs)
scaffold0161 (12-229)||(2231-2448)
[»] scaffold0150 (1 HSPs)
scaffold0150 (51-148)||(32248-32345)
[»] scaffold0080 (2 HSPs)
scaffold0080 (34-198)||(19701-19865)
scaffold0080 (1-80)||(48921-49000)
[»] scaffold0175 (1 HSPs)
scaffold0175 (4-191)||(34230-34417)
[»] scaffold0023 (3 HSPs)
scaffold0023 (6-186)||(40003-40183)
scaffold0023 (6-182)||(100486-100662)
scaffold0023 (78-186)||(101578-101685)
[»] scaffold0737 (1 HSPs)
scaffold0737 (34-198)||(1614-1778)
[»] scaffold0628 (1 HSPs)
scaffold0628 (85-233)||(2585-2734)
[»] scaffold0207 (1 HSPs)
scaffold0207 (6-186)||(2474-2654)
[»] scaffold1403 (1 HSPs)
scaffold1403 (86-233)||(742-888)
[»] scaffold0333 (2 HSPs)
scaffold0333 (19-186)||(6736-6903)
scaffold0333 (19-186)||(14116-14283)
[»] scaffold0102 (1 HSPs)
scaffold0102 (6-182)||(19376-19552)
[»] scaffold0005 (1 HSPs)
scaffold0005 (26-233)||(267793-267990)
[»] scaffold0008 (1 HSPs)
scaffold0008 (6-186)||(14526-14706)
[»] scaffold0278 (1 HSPs)
scaffold0278 (6-186)||(5755-5934)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-186)||(5952-6137)
[»] scaffold0020 (1 HSPs)
scaffold0020 (86-182)||(15665-15761)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-186)||(864-1048)
[»] scaffold0123 (3 HSPs)
scaffold0123 (141-233)||(25353-25445)
scaffold0123 (7-82)||(650-725)
scaffold0123 (6-63)||(25219-25276)
[»] scaffold1419 (1 HSPs)
scaffold1419 (36-169)||(165-297)
[»] scaffold0475 (1 HSPs)
scaffold0475 (94-191)||(9275-9372)
[»] scaffold0461 (1 HSPs)
scaffold0461 (6-80)||(11576-11651)
[»] scaffold0247 (1 HSPs)
scaffold0247 (6-80)||(17961-18036)
[»] scaffold0192 (1 HSPs)
scaffold0192 (143-229)||(10158-10245)
[»] scaffold0184 (1 HSPs)
scaffold0184 (4-75)||(1013-1083)
[»] scaffold0166 (2 HSPs)
scaffold0166 (143-229)||(9620-9707)
scaffold0166 (1-66)||(9784-9849)
[»] scaffold0124 (1 HSPs)
scaffold0124 (6-80)||(38190-38265)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-68)||(207467-207534)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-66)||(27-92)
[»] scaffold0098 (1 HSPs)
scaffold0098 (154-222)||(26847-26916)
[»] scaffold0415 (1 HSPs)
scaffold0415 (1-80)||(657-736)
[»] scaffold0229 (1 HSPs)
scaffold0229 (1-80)||(11268-11347)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-80)||(35853-35932)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-80)||(189144-189223)
scaffold0012 (6-80)||(225518-225593)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-75)||(32432-32506)
[»] scaffold0141 (1 HSPs)
scaffold0141 (2-80)||(13854-13932)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-66)||(12758-12823)
[»] scaffold0235 (1 HSPs)
scaffold0235 (143-222)||(13811-13891)


Alignment Details
Target: scaffold0555 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 10555 - 10365
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10555 gtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaa 10456  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  10455 caacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcaacaaagatcgcatttaacctaacaagg 10365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 8e-85; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 52927988 - 52927806
Alignment:
Q  9 catctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaaca 108  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  52927988 catctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaata 52927889  T
Q  109 gtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  52927888 gcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaacaagg 52927806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 182
Target Start/End: Original strand, 33681118 - 33681295
Alignment:
Q  5 tcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaac 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33681118 tcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactagaacaac 33681217  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  33681218 aacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgtgacaaagatcgcatttaac 33681295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 26 - 233
Target Start/End: Complemental strand, 16368275 - 16368068
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| ||||||| |||||||||||||||||||||||||||    
T  16368275 ataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataaacaactta 16368176  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagc 225  Q
     ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16368175 atttcttacccctatgatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctcacaagggctcgcgaggcgagagc 16368076  T
Q  226 ctctactc 233  Q
    || |||||    
T  16368075 ctttactc 16368068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 22237734 - 22237920
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||  ||||||    
T  22237734 gtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataactttagaaacaacatcaattcatatgtatcagtctcgctggaa 22237833  T
Q  101 caacaa-cagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  22237834 caacaatcagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgaaaaagatcgcatttaacctaa 22237920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21861584 - 21861351
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    ||||||||||||||||| || || | |||||||  ||||||||||||||| ||||| ||||||||||||||||||  |||||    |||| ||||||| |    
T  21861584 gtcatcaacatctcaaacattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcatatcataatattcaggcttactgaa 21861485  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    ||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||     
T  21861484 acaacaatagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaatgtcacatttaacctaacaaggcattctgt 21861385  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||| | ||||||||||| ||||||||||    
T  21861384 ctcacaaggacacgcgaggcgagggcctctactc 21861351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21896270 - 21896040
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    ||||||||||||||||| || || | ||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||    |||| ||||||| |    
T  21896270 gtcatcaacatctcaaacattcatatataattcatgtaatgtatatacaattatatcacattataaacaacatcaaatcataatattcaggcttactgaa 21896171  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    |||||||||   |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||     
T  21896170 acaacaaca---agataaacaacttagtttcttacatctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattttgt 21896074  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||| ||||||||||| | ||||||||||    
T  21896073 ctcacaaggactcgcgaggcgggggcctctactc 21896040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 50686725 - 50686952
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||| |||||||||   ||||||   |||| ||||||| |||||||    
T  50686725 caacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattattaacaacatcggatcatataattcaggcttactgaaacaaca 50686824  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    |||||||||||| ||||||||||||| ||| | | ||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  50686825 acagtaagataagcaacttagtttcttacccccatgatcaactcacgtcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgtctcaca 50686924  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
     |||||||||||||||||||||||||||    
T  50686925 ggggctcgcgaggcgagagcctctactc 50686952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 12271695 - 12271886
Alignment:
Q  35 gtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaac 134  Q
    ||||| ||||||||| ||||| |||||||||| |||||||| |||       ||||||||||| ||||| ||||| | ||||||||||||||||||| ||    
T  12271695 gtaatatatatacaattatatcacattataaataacatcaactca-------cagtcttactgaaacaataacagcaggataaacaacttagtttcttac 12271787  T
Q  135 ctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||    
T  12271788 ctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgtctcacaaggactcgcgaggcgagagcctctactc 12271886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 21754192 - 21754370
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||||||||    
T  21754192 tatacaacattataaacaacatcaattcatatgcatcagtcttactggaacaatgacagcaagataaacaacttagtttctaacctctgagatcaactca 21754291  T
Q  151 catcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||||||||||||| | ||||||||||||||||||||   ||||    |||||  ||||||||||||||||||||    
T  21754292 catcaactcgtgcgacaaggatcacatttaacctaacaaggcagtctgtaaaacaagtactcgcgaggcgagagcctct 21754370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 20248386 - 20248567
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| || ||||||||||||||| || |||||||||||||||| |||||| |||||||||||||||  |||||||||||||||||||||||| ||||    
T  20248386 atcaacaacttaaatatcaaacataagtcatgtaatgtatatacaattatatatcattataaacaacatggattcatatgcatcagtcttactgg-acaa 20248484  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||  |||||||| ||||||||||||||||||||||||||| | ||||||||| |||||||||   || ||||||||||||    
T  20248485 caacatcaagataaataacttagtttctaacctctaagatcaatttacatcaacttgtgcgacaagaatcgcatttaacctaa 20248567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 20918711 - 20918936
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||||     
T  20918711 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacatcaattcataagcatgagtcttactggaacat 20918810  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||  ||| ||||| |||||||||||||||||||||||||||||||||||| |||  |||||||| || |||| ||||||| ||||  ||||    ||    
T  20918811 taacaacaaggtaaacgacttagtttctaacctctaagatcaactcacatcaagtcgaacgacaaagatcgcattcaacctaaaaaggcattctttaaca 20918910  T
Q  204 caagggctcgcgaggcgagagcctct 229  Q
    ||   |||||||||||||||||||||    
T  20918911 cacaagctcgcgaggcgagagcctct 20918936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 183
Target Start/End: Complemental strand, 22921878 - 22921701
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    |||||||||||||||||| || ||||| | |||||||||||||| ||||||||||||  |||||||| |  ||||||  || ||| ||||||| ||||||    
T  22921878 caacatctcaaatatcaa-caaaattcatataatgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaac 22921780  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacc 183  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  22921779 aacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacc 22921701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 233
Target Start/End: Complemental strand, 50614104 - 50613898
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||  ||||| ||||||  | ||||||||| ||||||   |||| ||||||| |  |||||| |||||| ||||||||||    
T  50614104 ataattcatgtaatgcatatacatttatatcacattaatatcaacatcaaatcatataattcaggcttactgaagtaacaacggtaagacaaacaactta 50614005  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagc 225  Q
    |||||| ||| |   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |    
T  50614004 gtttcttaccccct-gatcaattcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctcacaagggctcgcggggcgagaac 50613906  T
Q  226 ctctactc 233  Q
    ||||||||    
T  50613905 ctctactc 50613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 233
Target Start/End: Complemental strand, 50621932 - 50621726
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||  ||||| ||||||  | ||||||||| ||||||   |||| ||||||| |  |||||| |||||| ||||||||||    
T  50621932 ataattcatgtaatgcatatacatttatatcacattaatatcaacatcaaatcatataattcaggcttactgaagtaacaacggtaagacaaacaactta 50621833  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagc 225  Q
    |||||| ||| |   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |    
T  50621832 gtttcttaccccct-gatcaattcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctcacaagggctcgcggggcgagaac 50621734  T
Q  226 ctctactc 233  Q
    ||||||||    
T  50621733 ctctactc 50621726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 41050024 - 41049843
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    |||||||  |||||| |||||||| ||||| ||||||| |||||| |||| ||||||   |||| ||||||| |||||||||||||||||||  ||| ||    
T  41050024 ataattcaagtaatgcatatacaaatatatcacattattaacaacgtcaaatcatataattcaggcttactgaaacaacaacagtaagataagaaaccta 41049925  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaag 207  Q
    ||| || ||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  41049924 gttccttacccctatgatcaactcacatcaactcatgcgacaaaggtcacatataacctaacaaggtattctgtctcacaag 41049843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 20636956 - 20637140
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||| ||||||| |||||| |||||||||||| | |||||||||||||| ||||||||||||| | |||||| ||   |||    |||| ||||||||||    
T  20636956 gtcaacaacatcccaaata-caaacataattcatataatgtatatacaattatataacattatcatcaacattaaaaaatacaattcaggcttactggaa 20637054  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
      ||||||  ||| |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| || | ||||||||||    
T  20637055 tgacaacatcaaggtaaataacttagtttctaacctccaagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaa 20637140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 35981696 - 35981517
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||||||||| |||||||| | |||||||||| ||| ||||||||||||| | |||||| |    |||     ||| ||||||||||  |||    
T  35981696 caacatctcaaatatcaa-cataattcatataatgtatatgcaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgaca 35981598  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||  |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| || | ||||||||||    
T  35981597 acatcaagataaataacttagtttctaacctccaagatcaactcacatcaattcgtgcgacaaagatcgcttttaacctaa 35981517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 49261452 - 49261631
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||||||||| |||||||  | |||||||||||||| ||||||||||||| | |||||| |    |||    || | ||||||||||  |||    
T  49261452 caacatctcaaatatcaa-cataatttatataatgtatatacaattatataacattatcatcaacattagaatatacaattccggcttactggaaggaca 49261550  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||  ||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||    
T  49261551 acatcaaggtaaataacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaa 49261631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 22130921 - 22130844
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcata 81  Q
    ||||||| ||||| |||||||| ||| || ||||||| |||||||| ||||||||||||||| ||||||||| |||||    
T  22130921 atcaacaactcaattatcaaacttaagtcatgtaatgcatatacaattatataacattataagcaacatcaaatcata 22130844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1924975 - 1924896
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  1924975 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 1924896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 14295565 - 14295495
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa 75  Q
    ||||||| ||||| ||||| || ||| || |||||||||||||||| ||||||||||||| |||||||||||    
T  14295565 atcaacaactcaattatcagacttaagtcatgtaatgtatatacaattatataacattat-aacaacatcaa 14295495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20923989 - 20923910
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  20923989 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 20923910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 51130671 - 51130741
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa 75  Q
    ||||||| ||||| ||||| || ||| || |||||||||||||||| ||||||||||||| |||||||||||    
T  51130671 atcaacaactcaattatcagacttaagtcatgtaatgtatatacaattatataacattat-aacaacatcaa 51130741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41387894 - 41387815
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||| ||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  41387894 gtcatcaacatcttaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 41387815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 16093892 - 16093826
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacat 72  Q
    |||||||||||| |||| |  |||||| |||||||||||||||| ||||| |||||| || ||||||    
T  16093892 caacatctcaaacatcataggtaattcatgtaatgtatatacaaatatatcacattaaaatcaacat 16093826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 16381389 - 16381451
Alignment:
Q  99 aacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgt 161  Q
    |||||||| || || |||||||||||||||||| |||   | |||||||||||||||||||||    
T  16381389 aacaacaatagaaatataaacaacttagtttcttaccctcatgatcaactcacatcaactcgt 16381451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 35261092 - 35261015
Alignment:
Q  4 atcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||| || || |||||||||  |||||| |||||||| || || ||||||| ||||||||||| ||||    
T  35261092 atcaacatctcaaacattcatacataattcaagtaatgcatatacaattacatcacattattaacaacatcaaatcat 35261015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 43697623 - 43697708
Alignment:
Q  146 actcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgagagcctcta 230  Q
    |||||||||||||||||| ||| ||||||| ||   ||| |||||||||||||| |  |||   ||||||||||||||||||||||    
T  43697623 actcacatcaactcgtgcaacataggtcacgttattcctaaacaaggtgttctgtcagacacaagctcgcgaggcgagagcctcta 43697708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 433113 - 433193
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||| ||||||||||| ||| || | |||||||  |||||| |||||||| ||||| ||| ||||||||||||||| ||||    
T  433113 gtcaacaacatctcaattattcacatataattcaagtaatgcatatacaattatatcacaatataaacaacatcaaatcat 433193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 16758783 - 16758839
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatat 82  Q
    |||||||  |||||| |||||||| ||||| ||||||||||||||| ||| ||||||    
T  16758783 ataattcaagtaatgcatatacaattatatcacattataaacaacaacaaatcatat 16758839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 130012 - 130197
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  130012 gtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattgtaaacaacatcaattcatatgcatcagtcttactggaa 130111  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  130112 caacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaa 130197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16097435 - 16097616
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16097435 gtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaa 16097534  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  16097535 caacaacagcaagataaacaacttagtttctaatctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaac 16097616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 49389639 - 49389459
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    ||||||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49389639 caacatctcaactatcaaacataattcatttaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 49389540  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | || ||||||||||||    
T  49389539 acaacaagataaacaacttagtttctaacctctaagatcaacacacatcaactcgtgcgacaaggatcgcatttaacctaa 49389459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 16103891 - 16104071
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    ||||||||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  16103891 caacatctcaaatatcaaacataattcatttaatgtatataaaattatataacattataaacaacatcaattcatatggattagtcttactggaacaaca 16103990  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  | ||||||||||||    
T  16103991 acagcaagataaacaacttagtttctaacctctaagattaactcacatcaactcgtgcgacaaagagcgcatttaacctaa 16104071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 13210341 - 13210110
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatc-aattcatatgcatcagtcttactggaaca 102  Q
    ||||||| || ||||||||||||||| || |||||||||||||||| ||||||||||||||| ||||||  |||||||||||||||| ||||||||||      
T  13210341 atcaacaacttaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattgaattcatatgcatcagccttactggaatg 13210242  T
Q  103 acaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgact 201  Q
      ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||       
T  13210241 ttaacaacaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaa 13210142  T
Q  202 cacaagggctcgcgaggcgagagcctctactc 233  Q
    |||||| |||||||||||||||||||||||||    
T  13210141 cacaagtgctcgcgaggcgagagcctctactc 13210110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 52 - 233
Target Start/End: Original strand, 43927291 - 43927472
Alignment:
Q  52 atataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcac 151  Q
    |||| ||||||| ||||||||||| ||||||   |||| ||||||| ||||||||||||||||||| ||||||||||||| ||| | | |||||||||||    
T  43927291 atatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccatgatcaactcac 43927390  T
Q  152 atcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  43927391 atcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgtctcacaagggctcgcgaggcgagagcctctactc 43927472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 37251156 - 37250984
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| |||||||||||||||||||||||||||||||||||    
T  37251156 ataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcagacttactggaacaacaacagtaagataaacaactta 37251057  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 198  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37251056 gtttcttacccccaagatcaactcacatcaactcgtgcgacaaaggtcacttttaacctaacaaggtgttctg 37250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 12934268 - 12934141
Alignment:
Q  59 attataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaact 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12934268 attataaacaacatcaattcatatgcatcagtcttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaact 12934169  T
Q  159 cgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||||||| || ||||||||||||    
T  12934168 cgtgcgacaaagatcgcatttaacctaa 12934141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 1644648 - 1644517
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  1644648 tatacaacattataaacaacatcaattcatatgcatcagtcttactggaacaataacaacaagataaacaacttagtttctaacctctaagatcaactca 1644549  T
Q  151 catcaactcgtgcgacaaaggtcacatttaac 182  Q
    |||||||||||||||||| | || ||||||||    
T  1644548 catcaactcgtgcgacaaggatcgcatttaac 1644517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 32307824 - 32308003
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  32307824 tatacaacattataaacaacattaattcataagcatcagtcttactagaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactca 32307923  T
Q  151 catcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||||||||||||||| || |||||||||||| |||||  || ||   ||||||  ||||||||||||||||||||    
T  32307924 catcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggcgagagcctct 32308003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 58 - 229
Target Start/End: Complemental strand, 49668042 - 49667870
Alignment:
Q  58 cattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaac 157  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  49668042 cattatatacaacatcaactcatatgcatcagtcttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaac 49667943  T
Q  158 tcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    ||||||||||||| ||  ||||||||||| |||||   ||||   ||||||  ||||||||||||||||||||    
T  49667942 tcgtgcgacaaagatcgtatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctct 49667870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 15471031 - 15471215
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||| |  || |||||   |||| ||||||| ||    
T  15471031 gtcatcaacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacttagat-catataattcaggcttactgaaa 15471129  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| || ||||||||||||    
T  15471130 caacaacaacaagataaacaacttagtttctaacctccaagatcatctaacatcaactcgtgcgacaaagatcgcatttaacctaa 15471215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 9513064 - 9513195
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||| ||||||    
T  9513064 tataaaacattataaacaacatcaattcatatgcatcagtcttactggaacaataacaacaaggtaaacaacttagtttctaacctctaagattaactca 9513163  T
Q  151 catcaactcgtgcgacaaaggtcacatttaac 182  Q
    ||| |||| ||||||||||| || ||||||||    
T  9513164 cataaacttgtgcgacaaagatcgcatttaac 9513195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 9521045 - 9521170
Alignment:
Q  57 acattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaa 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||| ||||||||| ||    
T  9521045 acattataaacaacatcaattcatatgcatcagtcttactggaacaataacaacaaggtaaacaacttagtttctaacctctaagattaactcacataaa 9521144  T
Q  157 ctcgtgcgacaaaggtcacatttaac 182  Q
    || ||||||||||| || ||||||||    
T  9521145 cttgtgcgacaaagatcgcatttaac 9521170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 22110338 - 22110133
Alignment:
Q  28 aattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagt 127  Q
    ||||| |||||||  ||||||  ||||| ||||||| |||||| |||| |||||    |||| ||||||| ||||||||||||||||||| |||||||||    
T  22110338 aattcatgtaatgcgtatacatttatatcacattattaacaacttcaaatcatacaattcaggcttactgaaacaacaacagtaagataagcaacttagt 22110239  T
Q  128 ttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagcct 227  Q
    |||| |||   | |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | | |  | |||||||||||||||||||    
T  22110238 ttcttaccctcatgatcaactcacatcaattcgtgcgacaaaggtcacattaaacctaacaaggtgttctgtccctcttgagctcgcgaggcgagagcct 22110139  T
Q  228 ctactc 233  Q
    ||||||    
T  22110138 ctactc 22110133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 12174271 - 12174152
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12174271 caacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataaacaacattgattcatatgcatcagtcttactggaacaaca 12174172  T
Q  106 acagtaagataaacaactta 125  Q
    |||| ||| |||||||||||    
T  12174171 acagcaagctaaacaactta 12174152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14234594 - 14234781
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga- 99  Q
    ||||||||||||  ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  | | |    |||| ||||||| |     
T  14234594 gtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattaaacaattcaggcttactgaac 14234693  T
Q  100 -acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
     |||||||||  |||||||| |||||||||||||||||| |||||||||| ||||||||| || |||||||| |||||||||||||||    
T  14234694 aacaacaacaacaagataaataacttagtttctaacctccaagatcaactaacatcaacttgttcgacaaagatcacatttaacctaa 14234781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 1465419 - 1465240
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||||||||| |||||||| |||||||||||||||| | ||||||||||| | |||||| |    | |     ||| ||||||||||  |||    
T  1465419 caacatctcaaatatcaa-cataattcatgtaatgtatatacaattgtataacattatcatcaacattagaataaacaatccaggcttactggaatgaca 1465321  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
     ||  ||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | || ||||||||||    
T  1465320 gcatcaaggtaaataacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaagattacttttaacctaa 1465240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 17672869 - 17672952
Alignment:
Q  141 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagag 224  Q
    |||||||||||| | ||||||||||| |||||||| |||||||||||||| | ||||| |||| ||||||||||||||||||||    
T  17672869 gatcaactcacaacgactcgtgcgacgaaggtcacttttaacctaacaagatattctgtctcataagggctcgcgaggcgagag 17672952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 324481 - 324538
Alignment:
Q  141 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 198  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  324481 gatcaactcacatcaacttgtacgacaaaggtcacatttaacctaacaaggtgttctg 324538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23413265 - 23413186
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| ||||| || ||||||||||||||||| | |||||| ||||    
T  23413265 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatccatctatataacattataaatatcatcaaatcat 23413186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 12171992 - 12171935
Alignment:
Q  129 tctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||||||||||||||||||||||||| |||||||||   || ||||||||||||    
T  12171992 tctaacctctaagatcaactcacatcaacttgtgcgacaagaatcgcatttaacctaa 12171935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8489311 - 8489232
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  8489311 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaaatatataacattataaatatcatcaaatcat 8489232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19776028 - 19776107
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  19776028 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 19776107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 24340732 - 24340657
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||| || | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  24340732 caacatctcaaatattcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 24340657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37439482 - 37439403
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  37439482 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 37439403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 37642274 - 37642199
Alignment:
Q  6 caacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||| ||| | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  37642274 caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 37642199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 2051208 - 2051137
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaat 76  Q
    |||||||||||| || || | |||||||  |||||| |||||||| ||||| ||||||||||||||||||||    
T  2051208 caacatctcaaacattcatatataattcaagtaatgcatatacaattatatcacattataaacaacatcaat 2051137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4107243 - 4107164
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  4107243 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 4107164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4111095 - 4111016
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  4111095 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 4111016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 12340000 - 12340043
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||||| || ||||||||||||||||| |||||||||||||||    
T  12340000 tcaactctcaacaactcgtgcgacaaagatcacatttaacctaa 12340043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 14665853 - 14665940
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||||||||||||||||| || |||||||||||| |||||  |||||    || || |||||||||||||||||||||    
T  14665853 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctct 14665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 14735366 - 14735453
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||||||||||||||||| || |||||||||||| |||||  |||||    || || |||||||||||||||||||||    
T  14735366 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctct 14735453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15965232 - 15965311
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  15965232 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 15965311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15969156 - 15969235
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  15969156 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 15969235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15973080 - 15973159
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  15973080 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 15973159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16749840 - 16749761
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||| ||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  16749840 gtcatcaacatcttaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 16749761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 22147534 - 22147467
Alignment:
Q  6 caacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacat 72  Q
    |||||||||||||| ||| | |||||||  |||||| |||||||| ||||| ||||||||||||||||    
T  22147534 caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaacaacat 22147467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 52523736 - 52523665
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaat 76  Q
    |||||||||||| || || | |||||||  |||||| |||||||| ||||| ||||||||||||||||||||    
T  52523736 caacatctcaaacattcatatataattcaagtaatgcatatacaattatatcacattataaacaacatcaat 52523665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 606229 - 606150
Alignment:
Q  154 caactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||| ||||||||||| ||||| ||||| |||||| || |||   ||||||||||||||  |||||||||    
T  606229 caactcgtgcgacaa-ggtcacatttatcctaaacaaggcgttctgtctaacactagctcgcgaggcgaggacctctactc 606150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16750434 - 16750390
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatat 45  Q
    ||||||||||||||||  |||||||||||||| || |||||||||    
T  16750434 gtcatcaacatctcaatcatcaaacataattcatgcaatgtatat 16750390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8573 - 8808
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaac--tatataacattataaacaacatcaattcatatgcatcagtcttactg 97  Q
    |||||||||||||||||||| || | |||||||  |||||||||||||||   ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  8573 gtcatcaacatctcaaatattcatatataattcaagtaatgtatatacaatattatatcacattataaacaacatcaattcatatacatcagtcttactg 8672  T
Q  98 gaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttct 197  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  8673 gaacaacatcagcaagataaacaacttagtttcttacctctaagatcaattcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattct 8772  T
Q  198 gactcacaagggctcgcgaggcgagagcctctactc 233  Q
    | ||||||||| ||||||||||||| ||||||||||    
T  8773 gtctcacaaggactcgcgaggcgagggcctctactc 8808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 6647 - 6826
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||| |||||  |||||||| |  ||||||  || ||| ||||||| ||||||    
T  6647 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaac 6745  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||||| |||||    
T  6746 aacagcaagataa-caacttagtttttaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaa 6826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 21565649 - 21565827
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21565649 gtcatcaacatttcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactagaa 21565748  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacattt 179  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  21565749 caacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattt 21565827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 20026936 - 20026722
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaa 118  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||  |||||   |||| ||||||| |||||| |||  ||||||||    
T  20026936 atcaaacataattcatgtaatgtatatacaactatatagcattatcaacaacattaaaacatataattcaggcttactgaaacaactacaacaagataaa 20026837  T
Q  119 caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgagg 218  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||  ||||| ||||||||| |||||||||    
T  20026836 caacttagtttcttacctctaagatcaactcacatcgactcgtgcgacaacggtcacatttaagctaacaaggcattctgtctcacaaggactcgcgagg 20026737  T
Q  219 cgagagcctctactc 233  Q
    |||||||||||||||    
T  20026736 cgagagcctctactc 20026722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 19669005 - 19669189
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaat--tcatatgcatcagtcttactggaac 101  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19669005 atcaacaactcaaatatcaaacataagtcctgtaatgtatatacaattatataacattataaacaacatcaatattcatatgcatcagtcttactggaac 19669104  T
Q  102 aacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| |||||    
T  19669105 aacaacaacaagataaacgacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaagaatcacatttatcctaa 19669189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 19660849 - 19660624
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||     
T  19660849 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacat 19660750  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |  |||| ||||||| |||| ||||||   ||    
T  19660749 taacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagattgcattcaacctaaaaaggcgttctgtaaca 19660650  T
Q  204 caagggctcgcgaggcgagagcctct 229  Q
    |||  |||||||||||||||||||||    
T  19660649 caaacgctcgcgaggcgagagcctct 19660624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 4 - 186
Target Start/End: Complemental strand, 22959546 - 22959364
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| ||| ||||||  |||||||||||||||||||||||||||||    
T  22959546 atcaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattttaaccaacattgattcatatgcatcagtcttactggaacaa 22959447  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
     ||||  |||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||   || ||||||||||||    
T  22959446 aaacaacaagataaacaacttggtttttaacctctaagatcaactcacatcaacttgtgcaacaagaatcgcatttaacctaa 22959364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 26012044 - 26011861
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |||||||||| |  ||||||||||  | ||||   |||| ||||||| |||||||    
T  26012044 caacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacatcaacaacaacatcagattatatagttcaggcttactgaaacaaca 26011945  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 189  Q
    | |  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  26011944 ataacaagataaacaacttagtttctaacctccaagatcaactcacatcaactcgtgtgacaaagatcacatttaacctaacaa 26011861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 21329511 - 21329326
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||  ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  | |||    |||| ||||||| ||    
T  21329511 gtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaa 21329412  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  21329411 caacaacaacaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaa 21329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 22178228 - 22178001
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||| ||||||||| | ||||||   | ||  |||||| |||||||    
T  22178228 caacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattattaacaacatccaatcatataatttaggtttactgaaacaaca 22178129  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcac 204  Q
    |||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||| |||||||||||||   | ||| ||||||||||| || |||||    
T  22178128 acagtaagataagcaacttagtttcttacccccatgatcaactcacatcaactcgtgtgacaaaggtcaca-aaaccctaaacaaggtgttatgtctcac 22178030  T
Q  205 aagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||| |||||||||||||||||    
T  22178029 aagggctcgcggggcgagagcctctactc 22178001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 21502170 - 21501978
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgca-tcagtcttactgga 99  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  ||||||  | |||| ||||||| |    
T  21502170 gtcatcatcatcttaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaa 21502071  T
Q  100 acaacaacagtaagataaacaacttag-tttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    |||||||||| |||||||||||||||| |||||||| || |||||||||| ||||||||||||||||||||  || ||||||||| |||||||    
T  21502070 acaacaacagcaagataaacaacttagttttctaacttccaagatcaactaacatcaactcgtgcgacaaatatcgcatttaacccaacaagg 21501978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 25743924 - 25744059
Alignment:
Q  98 gaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttct 197  Q
    |||||||||||  |  |||| ||||||||||| | ||| | | |||||||||||||||||||||||||||||||||||||  | ||||||||||   |||    
T  25743924 gaacaacaacaacagcataagcaacttagtttattacccccatgatcaactcacatcaactcgtgcgacaaaggtcacataaaccctaacaaggcagtct 25744023  T
Q  198 gactcacaagggctcgcgaggcgagagcctctactc 233  Q
    | | | ||||||||||||||||||||||||||||||    
T  25744024 gtcactcaagggctcgcgaggcgagagcctctactc 25744059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 21741469 - 21741374
Alignment:
Q  91 cttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||||||||  ||||||  ||| |||  |||||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||    
T  21741469 cttactggaatgacaacatcaaggtaattaacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaa 21741374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 27988846 - 27988770
Alignment:
Q  98 gaacaacaacagtaagataaacaacttagtttct-aacctctaagatcaactcacatcaactcgtgcgacaaaggtca 174  Q
    ||||||||||||  | ||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||    
T  27988846 gaacaacaacagatatataaacaacttagttccttaacctc-atgatcaactcacatcaactcgtgcgacaaaggtca 27988770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21871586 - 21871507
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||||||||    
T  21871586 gtcatcaacatctcaagcatcaaacataattcatgcaatatatatcgaattatataacattataaatatcatcaattcat 21871507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21875866 - 21875787
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||||||||    
T  21875866 gtcatcaacatctcaagcatcaaacataattcatgcaatatatatcgaattatataacattataaatatcatcaattcat 21875787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 233
Target Start/End: Original strand, 15796553 - 15796760
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||||  || ||||||||||| ||||| ||||||| | ||||||||| |||| |  ||||| ||||||| |||| || |||||  |||| ||||||     
T  15796553 ataattcgcatactgtatatacaattatatcacattattagcaacatcaaatcatttatatcaggcttactgaaacagcagcagtagtataagcaacttc 15796652  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgagag 224  Q
     ||||  ||| | | ||||| |||||| ||||||||||||||||  ||||||  | ||| ||||||||  | || || ||| | |||||||||||||| |    
T  15796653 atttcctaccccaaggatcatctcacaacaactcgtgcgacaaa-atcacataaatcctaaacaaggtagtttgtctaacaggagctcgcgaggcgaggg 15796751  T
Q  225 cctctactc 233  Q
    |||||||||    
T  15796752 cctctactc 15796760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 21741541 - 21741486
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacatta 62  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||    
T  21741541 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataacatta 21741486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 10753624 - 10753703
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  10753624 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 10753703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22120210 - 22120131
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  22120210 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 22120131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 24767210 - 24767123
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||||||||||||||||| ||||||||||||||| |||||  |||||    || || |||||||||||||||||||||    
T  24767210 tcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctct 24767123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 40725965 - 40726040
Alignment:
Q  6 caacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||| ||| | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  40725965 caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 40726040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 22120066 - 22119979
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||||||||||||||||| || |||||||||||| |||||  |||||    || || |||||||||||||||||||||    
T  22120066 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctct 22119979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 22144161 - 22144236
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||| || || | |||||||  |||||| |||||||| ||||| ||||| ||||||||||||||||||    
T  22144161 caacatctcaaacattcatatataattcaagtaatgcatatacaattatatcacattgtaaacaacatcaattcat 22144236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 36314670 - 36314728
Alignment:
Q  16 aatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa 75  Q
    |||||| ||| ||| || |||||||||||||||| ||||||||||||| |||||||||||    
T  36314670 aatatcgaacttaagtcatgtaatgtatatacaattatataacattat-aacaacatcaa 36314728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24767352 - 24767287
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaa 66  Q
    ||||||||||| ||||  |||||||||||||| || ||| |||||  || ||||||||||||||||    
T  24767352 gtcatcaacatttcaatcatcaaacataattcatgcaatatatatctaattatataacattataaa 24767287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 29448116 - 29448192
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatat 82  Q
    |||||||||||| |||| || |||||| ||||||| |||||||| || || || |||| | ||||||||| ||||||    
T  29448116 caacatctcaaacatcatacgtaattcatgtaatgcatatacaaatacatcaccttattatcaacatcaaatcatat 29448192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 53563 - 53330
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    |||||||||||||||||||| || | |||||||  ||||||||||||||| ||||| ||||||||||||||||||| |||||  ||||||||||||||||    
T  53563 gtcatcaacatctcaaatattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactgga 53464  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    ||| |||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||     
T  53463 acatcaacataaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggacacaataaaccttacaaggtgttctgt 53364  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||| ||||||||||||| ||||||||||    
T  53363 ctcacaaggactcgcgaggcgagggcctctactc 53330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 8167 - 8080
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    ||||| || ||||||||||||||||||| || |||||||||| |||||||  |||||   ||| || |||||||||||||||||||||    
T  8167 tcaacccatatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacactagtgctcgcgaggcgagagcctct 8080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13865 - 13632
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    |||||||||||||||||||| || | |||||||  ||||||||||||||| ||||| ||||||||||||||||||| |||||  ||||||||||||||||    
T  13865 gtcatcaacatctcaaatattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactgga 13766  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    ||| |||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||     
T  13765 acatcaacataaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggacacaataaaccttacaaggtgttctgt 13666  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||| ||||||||||||| ||||||||||    
T  13665 ctcacaaggactcgcgaggcgagggcctctactc 13632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 8846479 - 8846660
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8846479 gtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaa 8846578  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    |||||||   ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||    
T  8846579 caacaactacaagataaacaacttagtttctaatctctaagttcaactcacatcaactcgtgcgacaaagatcgcatttaac 8846660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 7 - 233
Target Start/End: Complemental strand, 53082159 - 53081932
Alignment:
Q  7 aacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaa 106  Q
    ||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| ||||||| ||||||||    
T  53082159 aacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaa 53082060  T
Q  107 cagtaagataaacaacttagtttctaacctct-aagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    ||||||||||| ||||||||||||| ||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  53082059 cagtaagataagcaacttagtttcttaccccccaagatcaactcacatcaactcgtgcgacaaatgtcacatttaacctaacaaggtgttctgtctcaca 53081960  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||| ||||||||||||||||    
T  53081959 agggctcgcgacgcgagagcctctactc 53081932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 12774154 - 12774333
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12774154 tatacaacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactca 12774253  T
Q  151 catcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||||||||||||| | || |||||||||||| |||||   ||||   ||||||  ||||||||||||||||||||    
T  12774254 catcaactcgtgcgacaaggatcgcatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctct 12774333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 12288205 - 12287991
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaa 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||| || ||||||   |||| ||||||| ||||||||||| ||||||||    
T  12288205 atcaaacataattcatgtaatgtatatacaactatataacattaccaacaacattaaatcatataattcaggcttactgaaacaacaacagcaagataaa 12288106  T
Q  119 caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgagg 218  Q
    ||||||||||||  ||||| ||||||||||||||||||||  ||||||||| |||||||| |||||||||| ||||| || ||| |  | ||||||||||    
T  12288105 caacttagtttcctacctccaagatcaactcacatcaacttatgcgacaaaagtcacattaaacctaacaaagtgttatgtctctcttgagctcgcgagg 12288006  T
Q  219 cgagagcctctactc 233  Q
    ||||||| |||||||    
T  12288005 cgagagcttctactc 12287991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 26 - 232
Target Start/End: Complemental strand, 46640444 - 46640239
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||  ||||| |||| || ||||||||||| ||||||   ||||  |||||| ||||| ||||||||||||| |||||||    
T  46640444 ataattcatgtaatgcatatacatttatatcacatcattaacaacatcaaatcatataattcaggtttactgaaacaataacagtaagataagcaactta 46640345  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagc 225  Q
    |||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  46640344 gtttcttacccc-atgatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctgtctcacaagggctcgcaaggcgagagc 46640246  T
Q  226 ctctact 232  Q
    |||||||    
T  46640245 ctctact 46640239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 233
Target Start/End: Original strand, 16596763 - 16596984
Alignment:
Q  12 ctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagta 111  Q
    ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||| ||| |||||||||||||| |||||  ||||| |    
T  16596763 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaatttataagcatcagtcttacttgaacattaacagca 16596862  T
Q  112 agataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggct 211  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||| ||||  |||||   |||||  ||     
T  16596863 aggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcacattcaacctaaaaaggcattctgtaacacaaacgcc 16596962  T
Q  212 cgcgaggcgagagcctctactc 233  Q
    |||| ||||||| |||||||||    
T  16596963 cgcggggcgagaacctctactc 16596984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 43198567 - 43198380
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    |||||||| ||||||||||| || | |||||||  ||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  43198567 gtcatcaatatctcaaatattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaattcatatgcattagtcttactgga 43198468  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaag 190  Q
    ||| |||||  ||||||||||||||||||| | ||||||   | ||||||||||||||||||| ||||||| || ||||||||||||||||    
T  43198467 acatcaacaacaagataaacaacttagttttttacctct---agcaactcacatcaactcgtgtgacaaagatcgcatttaacctaacaag 43198380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 15551924 - 15552105
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| ||||||  ||||||| |||||||||||||||| |||     
T  15551924 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattgattcataagcatcagtcttactgggacat 15552023  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
     ||||| | | | ||||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||| ||||||    
T  15552024 taacagcagggt-aacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattttacctaa 15552105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 39706281 - 39706118
Alignment:
Q  23 aacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaac 122  Q
    |||||||||| |||||||||||||||| ||||||||||||  |||||||| |  ||||||   |||| ||||||  ||||||||||| ||||||||||||    
T  39706281 aacataattcatgtaatgtatatacaattatataacattagcaacaacattagatcatataattcaggcttactaaaacaacaacagcaagataaacaac 39706182  T
Q  123 ttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||| || |||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||    
T  39706181 ttaattcctaatctccaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaa 39706118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 15099461 - 15099640
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||| | |||||| |    |||     ||| ||||||||||  |||    
T  15099461 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgaca 15099559  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||  ||| |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| || | ||||||||||    
T  15099560 acatcaaggtaaataacttagtttctaacctccaagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaa 15099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 15190428 - 15190607
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||| | |||||| |    |||     ||| ||||||||||  |||    
T  15190428 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgaca 15190526  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||  ||| |||| |||||||||||||||| | |||||||||||||||||||||||||||||||| || | ||||||||||    
T  15190527 acatcaaggtaaataacttagtttctaacccccaagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaa 15190607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 630789 - 630710
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||| | || ||| ||||| ||| |||||||||||||||| |||||||| ||||    
T  630789 gtcatcaacatctcaatcatcaaacataatgcatgcaatatatatccaattatataacattataaataacatcaaatcat 630710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 173
Target Start/End: Original strand, 14164732 - 14164827
Alignment:
Q  77 tcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtc 173  Q
    |||||||  |||| |||||| |||||||||||| |||||||||||||||||| | |||| ||| ||||| |||||| | |||| ||| |||||||||    
T  14164732 tcatatgattcaggcttactagaacaacaacagcaagataaacaacttagttcccaacccctaggatcatctcacaac-actcttgcaacaaaggtc 14164827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3331991 - 3332070
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  3331991 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 3332070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14953976 - 14953897
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  14953976 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 14953897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 22634086 - 22633999
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||| ||||||||||||| || |||||||||||| |||||  |||||   |||||| |||||||||||||||||||||    
T  22634086 tcaactcataacaaatcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctct 22633999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25690167 - 25690246
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  25690167 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 25690246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13812824 - 13812759
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaa 66  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || ||||||||||||||||    
T  13812824 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaa 13812759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 173
Target Start/End: Original strand, 14158027 - 14158122
Alignment:
Q  77 tcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtc 173  Q
    |||||||  |||| |||||| |||||||||||| |||||||| ||||||||| | |||| ||| ||||| |||||| | |||| ||| |||||||||    
T  14158027 tcatatgattcaggcttactagaacaacaacagcaagataaaaaacttagttcccaacccctaggatcatctcacaac-actcttgcaacaaaggtc 14158122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 16043259 - 16043351
Alignment:
Q  141 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    |||||||||||  ||||||||||||||||| || |||  | |||||||||||  |||| ||| || | |||||||||||||| | ||||||||    
T  16043259 gatcaactcaccacaactcgtgcgacaaagatcgcatgaaccctaacaaggtagtctgtctctcaggagctcgcgaggcgagggactctactc 16043351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 10713113 - 10713192
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  10713113 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 10713192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 10926883 - 10926962
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  10926883 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 10926962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 13812682 - 13812639
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||| | ||||||||||||||||| |||||||||||||||    
T  13812682 tcaactcataacaactcgtgcgacaaagatcacatttaacctaa 13812639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 13844786 - 13844877
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||| ||| ||| ||||||| ||   ||||| |||||||||||| |  |||   |||||||||||||||||||||||||    
T  13844786 tcaactcacatcaactcatgcaacataggtcacgttattcctaaacaaggtgttctgtcagacacaagctcgcgaggcgagagcctctactc 13844877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15225338 - 15225417
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||| ||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  15225338 gtcatcaacatcttaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 15225417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 24028989 - 24029076
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||||||||||||||||| || |||||||||||| |||||  |||||    || || |||||||||||||||||||||    
T  24028989 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctct 24029076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12487971 - 12488045
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa 75  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | ||||||    
T  12487971 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaa 12488045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 52243173 - 52243128
Alignment:
Q  35 gtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  52243173 gtaatgcatatacaattatatcacattataaacaacatcaaatcat 52243128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 15791916 - 15791960
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||| |||||||||||||| ||||||| ||||||||||| ||||    
T  15791916 taatgcatatacaactatatcacattattaacaacatcaaatcat 15791960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 15116587 - 15116819
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||||||   ||| | |||| ||  ||||| ||||||||| ||||| |||||||||| |||||||| |||||| |||||||||||||| ||    
T  15116587 gtcatcaacatctcaatattcacatataactcaagtaatatatatacaattatatcacattataaataacatcaactcatatacatcagtcttactgaaa 15116686  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgac 200  Q
    ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  15116687 caataacagtaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgtc 15116786  T
Q  201 tcacaagggctcgcgaggcgagagcctctactc 233  Q
    |||||||| ||||||||||||||||||||||||    
T  15116787 tcacaaggactcgcgaggcgagagcctctactc 15116819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 15113050 - 15113282
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||||||   ||| | |||| ||  ||||| ||||||||| ||||| |||||||||  |||||||| ||||||  ||||||||||||| ||    
T  15113050 gtcatcaacatctcaatattcacatataactcaagtaatatatatacaattatatcacattataattaacatcaactcatataaatcagtcttactgaaa 15113149  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgac 200  Q
    ||| ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |    
T  15113150 caataacagcaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcatcctgtc 15113249  T
Q  201 tcacaagggctcgcgaggcgagagcctctactc 233  Q
    |||||||| ||||||||||||||||||||||||    
T  15113250 tcacaaggactcgcgaggcgagagcctctactc 15113282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 20220200 - 20219972
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    |||||||||||||| |||| | ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| |||||||||||||    
T  20220200 atcaacatctcaaacatcatatataattcatgtaatgcatatacaattatatcacattattaacaacatcaaatcatctaaatcaggcttactggaacaa 20220101  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
    |||||||||||||| ||||||||||||| ||| ||  ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  20220100 caacagtaagataagcaacttagtttcttacccctgtgatcacctcacatcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgtctca 20220001  T
Q  204 caagggctcgcgaggcgagagcctctactc 233  Q
    ||| ||||||| |||||||| |||||||||    
T  20220000 caa-ggctcgcaaggcgagaacctctactc 20219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 186
Target Start/End: Complemental strand, 15754901 - 15754718
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa-ttcatatgcatcagtcttactggaaca 102  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||| |    
T  15754901 atcaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaaattcatatgcatcagtcttactggaata 15754802  T
Q  103 acaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
      ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  15754801 ttaacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaa 15754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 11996041 - 11995816
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| |||||||||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||||||||| |||     
T  11996041 atcaacaactcaaatatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactgggacat 11995942  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| ||| ||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||| || |||||||||||| ||||  |||||   ||    
T  11995941 taacagcaaggtaaacaaattagtttctaacctctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgtaaca 11995842  T
Q  204 caagggctcgcgaggcgagagcctct 229  Q
    |||  |||||||||||||||||||||    
T  11995841 caaatgctcgcgaggcgagagcctct 11995816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 28505304 - 28505087
Alignment:
Q  12 ctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagta 111  Q
    ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||   |||  |    
T  28505304 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacattgacaaca 28505205  T
Q  112 agataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggct 211  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || |||| ||||||| ||||  |||||   |||||  |||    
T  28505204 aggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaaggcattctgtaacacaaacgct 28505105  T
Q  212 cgcgaggcgagagcctct 229  Q
    ||||||||||||||||||    
T  28505104 cgcgaggcgagagcctct 28505087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 16219731 - 16219541
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  | ||||   |||| ||||||| ||    
T  16219731 gtcatcaacatcttaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaa 16219632  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  16219631 caacaacagcaagataaacaacttagtttctaacctccaagatcaactaacatcaacttgtgcgacaaagatcgcatttaacctaacaagg 16219541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 16056439 - 16056624
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  | ||||   |||| ||||| | |||||||    
T  16056439 caacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagattatatcattcaggcttaccgaaacaaca 16056538  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  16056539 acatcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgctacaaagatcgcatttaacctaacaagg 16056624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 34200893 - 34201118
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||||||||| |||     
T  34200893 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactgggacat 34200992  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||  | || |||||||||||| ||||  || ||   ||    
T  34200993 taacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacagggatcgcatttaacctaaaaaggcattatgtaaca 34201092  T
Q  204 caagggctcgcgaggcgagagcctct 229  Q
    |||  ||||||||||| |||||||||    
T  34201093 caaacgctcgcgaggcaagagcctct 34201118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 12901449 - 12901629
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaa 118  Q
    |||| ||||||||| |||||||||||||||||||||||||||||  |||||||| || ||||||   |||  ||||||| ||||||||||  ||||||||    
T  12901449 atcatacataattcatgtaatgtatatacaactatataacattaacaacaacattaaatcatataattcaagcttactgaaacaacaacaacaagataaa 12901548  T
Q  119 caacttagtttc-ta---acctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgtt 195  Q
    |||||||||||| ||   ||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  12901549 caacttagtttcctacgtacctccaagatcaactcacatcaactcgtacgacaaatgtcacatttaacctaacaaggtgtt 12901629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 67857 - 68036
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    ||||||||||| |||||| |||||||| | |||||||||||||| ||||||||||||  |||||||| |  ||||||  || ||| || |||| ||||||    
T  67857 caacatctcaa-tatcaa-cataattcatataatgtatatacaattatataacattaacaacaacattagatcatattaattcaggctcactgaaacaac 67954  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||    
T  67955 aacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaaggatcgcatttaacctaa 68036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 18005758 - 18005922
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgca-tcagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||| |||||  |||||||| |  ||||||  | |||| ||||||| ||||||    
T  18005758 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaaatcaggcttactgaaacaac 18005856  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaag 170  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  18005857 aacagcaagataaacaacttagtttctaacctctaagatcaactcatatcaacttgtgcgacaaag 18005922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 47831914 - 47832099
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||  ||| |||||||||||||| | |||||||||||||| ||||||||||||   ||||||| |  | |||    |||| ||||||| ||    
T  47831914 gtcatcaacatcataaacatcaaacataattcatataatgtatatacaattatataacattagcgacaacattagattatacaattcaggcttactgaaa 47832013  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  47832014 caacaacaacaagataaataacttagtttctaacctccaagatcaactcacatcaactcgtccgacaaagatcacatttaacctaa 47832099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 16324197 - 16324302
Alignment:
Q  86 tcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaaccta 185  Q
    |||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  16324197 tcaggcttactgaaacaacaacagcaagatcaacaacttagtttctaacctctaagatcaactcacatcaactcatgcgacaaggatcacatttaaccta 16324296  T
Q  186 acaagg 191  Q
    ||||||    
T  16324297 acaagg 16324302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 22073021 - 22073210
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataat-tcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    |||| |||||||||||| |||||||||||  || |||||||||||| ||| ||||||||||||  |||||||| |  | ||||   |||| ||||||| |    
T  22073021 gtcaacaacatctcaaacatcaaacataaactcatgtaatgtatatgcaattatataacattaacaacaacattagattatataattcaggcttactgaa 22073120  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 189  Q
    |||||||||  |||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||| | || |||||||||||||||    
T  22073121 acaacaacatcaagacaaacaacttagttccttacctgtaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaacaa 22073210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 811145 - 810912
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||| ||||||  ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  | |||    |||| ||||||| ||    
T  811145 gtcattaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaa 811046  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctga 199  Q
    | ||||||| |||||||| ||||||||||||||| || ||| |||||||||||||||| | ||||||||| || |||||||| | |||||||  || ||     
T  811045 ctacaacagcaagataaataacttagtttctaacttccaaggtcaactcacatcaacttgcgcgacaaagatcgcatttaacttaaacaaggcattttgt 810946  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
      || |||  ||||||||||||||||||||||||    
T  810945 aacataagtactcgcgaggcgagagcctctactc 810912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 44014285 - 44014464
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaaca 102  Q
    |||||||||||||||||||| |||||||| | |||||||||||||  |||||| ||||| ||||||||| |  ||||||  || ||| ||||||| ||||    
T  44014285 atcaacatctcaaatatcaa-cataattcatataatgtatatacagttatataccattaaaaacaacattagatcatattaattcaggcttactgaaaca 44014383  T
Q  103 acaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||||| ||||||| ||||||||||| ||||||||  |||||||||||||||| ||||||||||| | || ||||||||||||    
T  44014384 acaacagcaagataa-caacttagtttttaacctct--gatcaactcacatcaattcgtgcgacaatgatcgcatttaacctaa 44014464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 9389592 - 9389526
Alignment:
Q  120 aacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| || | ||||||||||    
T  9389592 aacttagtttctaacctccaagatcaactcacatcaactcgtgtgacaaagatcgcttttaacctaa 9389526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 14044858 - 14044935
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcata 81  Q
    |||||||||||||| |||| | ||||||| |||||||||||||||||||||||||||||| || ||||| || |||||    
T  14044858 atcaacatctcaaacatcatatataattcatgtaatgtatatacaactatataacattatcaaaaacattaaatcata 14044935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 14354888 - 14354965
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcata 81  Q
    |||||||||||||| |||| | ||||||| |||||||||||||||||||||||||||||| || ||||| || |||||    
T  14354888 atcaacatctcaaacatcatatataattcatgtaatgtatatacaactatataacattatcaaaaacattaaatcata 14354965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 1868003 - 1867929
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| ||||    
T  1868003 caacatctcaaacatcatatataattcatgtaatgcatatacaaatatatcacattattaacaacatcaaatcat 1867929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 9751423 - 9751336
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||||||||||||||||| || ||||||| |||| |||||  |||||   |||||| |||||||||||||||||||||    
T  9751423 tcaactcataacaactcgtgcgacaaagatcgcatttaaactaaacaaggcattctgtaacacaagcgctcgcgaggcgagagcctct 9751336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 16495509 - 16495579
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa 75  Q
    ||||||| ||||| ||||| || ||| || |||||||||||||||| ||||||||||||| |||||||||||    
T  16495509 atcaacaactcaattatcagacttaagtcatgtaatgtatatacaattatataacattat-aacaacatcaa 16495579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 9177495 - 9177447
Alignment:
Q  185 aacaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    |||||||||||||| || ||||| |||||||||||||| ||||||||||    
T  9177495 aacaaggtgttctgtcttacaagagctcgcgaggcgagggcctctactc 9177447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18426100 - 18426179
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||| ||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  18426100 gtcatcaacatcttaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 18426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 19486753 - 19486678
Alignment:
Q  6 caacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||| ||| | |||||||  || ||| |||||||| ||||| ||||||||||||||||||| ||||    
T  19486753 caacatctcaaataatcacatataattcaagttatgcatatacaattatatcacattataaacaacatcaaatcat 19486678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 39267519 - 39267476
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||| | ||||||||||||||||| |||||||||||||||    
T  39267519 tcaactcataacaactcgtgcgacaaagatcacatttaacctaa 39267476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39267661 - 39267582
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || ||||||| |||||||| | |||||| ||||    
T  39267661 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataaaattataaatatcatcaaatcat 39267582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45169852 - 45169773
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  45169852 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 45169773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 15008507 - 15008433
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||| |||||| |||| | |||||||  |||||| |||||||| ||||| ||||||| ||||||||||| ||||    
T  15008507 caacacctcaaacatcatatataattcaagtaatgcatatacaaatatatcacattattaacaacatcaaatcat 15008433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 9389705 - 9389649
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattat 63  Q
    |||||||||| ||||||| |||||||| |  ||||||||||||| |||||||||||||    
T  9389705 caacatctcatatatcaa-cataattcatacaatgtatatacaattatataacattat 9389649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9751565 - 9751500
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaa 66  Q
    ||||||||||| ||||  |||||||||||||| || ||| |||||  || ||||||||||||||||    
T  9751565 gtcatcaacatttcaatcatcaaacataattcatgcaatatatatctaattatataacattataaa 9751500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 45806 - 45621
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45806 gtcatcaacatctcaattatcaaacataattcatgtgatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaa 45707  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  45706 caattacagcaatataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaa 45621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 23791387 - 23791614
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| || | | ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| ||||||| |||||||    
T  23791387 caacatctcaaacattatatataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaaca 23791486  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    |||  |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23791487 acaacaagataaacaacttagtttccaacccccaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctcaca 23791586  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||||||||||||||    
T  23791587 agggctcgcgaggcgagagcctctactc 23791614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22459576 - 22459343
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    |||||||||||||||||||| || | |||| ||  ||||||||||||||| ||||| |||||||||| |||||||| || ||| |||||||||||||| |    
T  22459576 gtcatcaacatctcaaatattcacatataactcaagtaatgtatatacaattatatcacattataaataacatcaactcgtatacatcagtcttactgaa 22459477  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    |||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||  |||||     
T  22459476 acaataacagcaagataaacaacttagtttcttacctctaaggtcaactcacatcaactcgtaggacaaaggtcacatttaacctaacaaggcattctgt 22459377  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||| |||||||||| |||||||||||||    
T  22459376 ctcacaaggactcgcgaggcaagagcctctactc 22459343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 25109005 - 25109228
Alignment:
Q  10 atctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacag 109  Q
    |||||||| |||| | ||||||| ||||||| |||||||  ||||| | ||||| ||||||||||| ||||||   |||| ||||||| |||||||||||    
T  25109005 atctcaaacatcatatataattcatgtaatgcatatacatttatatcatattattaacaacatcaaatcatataattcaggcttactgaaacaacaacag 25109104  T
Q  110 taagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaaggg 209  Q
    |||||||| ||||||||||||| | | | | |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  25109105 taagataagcaacttagtttcttatccccatgatcaacttacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttttgtctcacaaggg 25109204  T
Q  210 ctcgcgaggcgagagcctctactc 233  Q
    ||| |||||| |||||||||||||    
T  25109205 ctcacgaggcaagagcctctactc 25109228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 18786898 - 18786684
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaa 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||| || |||||  | ||||||   | || ||||||| ||||||||||| | ||||||    
T  18786898 atcaaacataattcatgtaatgtatatacaactatataacattatcaataacattcaatcatataatttaggcttactgaaacaacaacagcatgataaa 18786799  T
Q  119 caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgagg 218  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||| ||| |  | ||||||||||    
T  18786798 caacttagtttcctacctccaagatcaactcacatcaactcgtgcgacaaaagtcacattagacctaacaaagtgttctgtctctcttgagctcgcgagg 18786699  T
Q  219 cgagagcctctactc 233  Q
    |||||||||||||||    
T  18786698 cgagagcctctactc 18786684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 23207410 - 23207582
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| |||||| |||||||||||||||||||| |||||||    
T  23207410 ataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggcttacttgaacaacaacagtaagataagcaactta 23207509  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 198  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23207510 gtttcttacccccaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 23207582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 22134181 - 22134046
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  22134181 tatacaacattataaacaacaccaattcatatgcatcagtcttactggaaaaatgacagcaagataaacaacttagtttctaacctctaagatcaactca 22134082  T
Q  151 catcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||||||||||||||| || ||||||||||||    
T  22134081 catcaactcgtgcgacaaagatcgcatttaacctaa 22134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 7747 - 7514
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    ||||||||||||||||| || || | |||||||  ||||||||||||||| ||||| ||||||  |||||||| || ||||||   |||| ||||||| |    
T  7747 gtcatcaacatctcaaacattcatatataattcaagtaatgtatatacaattatatcacattaacaacaacattaaatcatataattcaggcttactgaa 7648  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    |||||||||  | ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||     
T  7647 acaacaacaacatgataaacaacttagtttcctacctccaagatcaactcacatcaactcgtgcgacaaaggtcacattaaacctaaccaagtattctgt 7548  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||| || | ||||| |||||||||||||||||||    
T  7547 ctctcatgagctcgtgaggcgagagcctctactc 7514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 25175962 - 25176126
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | ||| ||||||| || ||||||||||||  |||||||| |  ||||||  || ||| ||||||| ||||||    
T  25175962 caacatctcaaatatcaa-cataattcatataacgtatatataattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaac 25176060  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaag 170  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  25176061 aacagcaagataaacaacttagtttctaacctctaagatcaacttacatcaattcgtgcgacaaag 25176126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 28406089 - 28406317
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgca-tcagtcttactggaacaac 104  Q
    |||||||||||||||||| | |||||| |  ||||||||||||| |||||| |||||  |||||||  |  ||||||  | | || ||||||  ||||||    
T  28406089 caacatctcaaatatcaa-cttaattcataaaatgtatatacaattatataccattaacaacaacaatagatcatattaaattaggcttactaaaacaac 28406187  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactca 203  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| |||||  || ||   ||    
T  28406188 aacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcattatgtaaca 28406287  T
Q  204 caagggctcgcgaggcgagagcctctactc 233  Q
    ||||  || |||||||||||||||||||||    
T  28406288 caagtacttgcgaggcgagagcctctactc 28406317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 23071955 - 23071865
Alignment:
Q  12 ctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaaca 102  Q
    ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  23071955 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaaca 23071865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 23708632 - 23708553
Alignment:
Q  2 tcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||| |||||||||| || |||| |||||||  |||||| |||||||| ||||| ||||||||||||||||||||||||    
T  23708632 tcatcgacatctcaaacattcaaatataattcaagtaatgcatatacaattatatcacattataaacaacatcaattcat 23708553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1283687 - 1283766
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  1283687 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 1283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7679691 - 7679750
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacat 60  Q
    ||||||||||||  ||| |||||||||||||| ||||||||||||| || ||||||||||    
T  7679691 gtcatcaacatcataaacatcaaacataattcatgtaatgtatatataattatataacat 7679750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30344837 - 30344758
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  30344837 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 30344758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 23071843 - 23071749
Alignment:
Q  135 ctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    ||||||||||||||||||||||||||  ||| |||| || |||| ||||||| ||||  || ||   |||||  |||||||||||||||||||||    
T  23071843 ctctaagatcaactcacatcaactcgaacgaaaaagatctcattcaacctaaaaaggcattttgtaacacaaacgctcgcgaggcgagagcctct 23071749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 20520201 - 20520127
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||| |||| | |||||||  |||||| |||||||| ||||| ||||||| ||| ||||||| ||||    
T  20520201 caacatctcaaacatcatatataattcaagtaatgcatatacaaatatatcacattattaacgacatcaaatcat 20520127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 139; Significance: 7e-73; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 6919 - 7101
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6919 atcaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataaacaacattaattcatatgcatcagtcttactggaacaa 7018  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   || ||||||||||||    
T  7019 caacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaagaatcgcatttaacctaa 7101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 8122 - 8310
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||| |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  | ||||   |||| ||||||| ||    
T  8122 gtcaacaacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaa 8221  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 189  Q
    ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| |||||||  |||||||||    
T  8222 caacaacagcaggataaacaacttagttccttacctctaagatcaactcacatcaactcgtgagacaaagatcacattatacctaacaa 8310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 160795 - 160976
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||| ||||||||||||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  160795 caacatgtcaaatatcaaacataagtcatgtaatatatatacaattatataacattataaacaacatcaattcatatgcatcagtcttaccgaaacaaca 160894  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaac 187  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  160895 acaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcacatttatcctaac 160976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 85498 - 85417
Alignment:
Q  141 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgag 222  Q
    |||||||||||| |||||||| |||| |||||||| |||||||||||||||| ||||| || | ||||||||||||||||||    
T  85498 gatcaactcacaacaactcgtacgacgaaggtcacttttaacctaacaaggtattctgtcttataagggctcgcgaggcgag 85417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 162930 - 162882
Alignment:
Q  185 aacaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||  |||||| ||||| ||||||||||||||| ||||||||||    
T  162930 aacaaggttgtctgacacacaaaggctcgcgaggcgagcgcctctactc 162882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 12675 - 12907
Alignment:
Q  1 gtcatcaacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    ||||||||||||||||||| | | | |||||||  ||||||||||||||| ||||| ||||||||||||||||||| | |||  ||| || ||||||| |    
T  12675 gtcatcaacatctcaaatacttatatataattca-gtaatgtatatacaattatatcacattataaacaacatcaaataatacacattagacttactgaa 12773  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  12774 acaacaacagcaagataaacaacttagtttattacctctaagatcaactcacatccactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgt 12873  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||| || | |||||||||||||||||||||||||    
T  12874 ctctcatgagctcgcgaggcgagagcctctactc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 7e-70; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 20498669 - 20498902
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactgga 99  Q
    ||||||||||||||||| || || | |||||||  ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||||||| | |    
T  20498669 gtcatcaacatctcaaacattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaaatcatatacatcagtcttaccgaa 20498768  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctga 199  Q
    ||| |||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||     
T  20498769 acatcaacatcaagataaacaacttagtttcttacctccaagatcaactcacatcaactcgtgtgacaaaggtcacaataaacctaacaaggtgttctgt 20498868  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||| || | |||||||||||||||||||||||||    
T  20498869 ctctcatgagctcgcgaggcgagagcctctactc 20498902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 17267001 - 17266775
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| || |||| |||||||    
T  17267001 caacatctcaaacatcatatataattcttgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggctcactgaaacaaca 17266902  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    |||||||||||| ||||||||||||| ||| |   ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  17266901 acagtaagataagcaacttagtttcttacccccgtgatcaactcacatcaactcgtgcgataaaggtcacatttaacctaacaaggagttctgtctcaca 17266802  T
Q  206 agggctcgcgaggcgagagcctctact 232  Q
    |||||||||||||||||||||||||||    
T  17266801 agggctcgcgaggcgagagcctctact 17266775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 22364774 - 22365001
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||  ||||| || |||| ||||||||||| ||||||   |||| ||||||| |||||||    
T  22364774 caacatctcaaacatcatatataattcatgtaatgcatatacatttatatcactttattaacaacatcaaatcatataattcaggcttactgaaacaaca 22364873  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    |||||||||||| ||||||||||| | | | |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22364874 acagtaagataagcaacttagtttattatccccctgatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctcaca 22364973  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    |||||||| |||||||||||||||||||    
T  22364974 agggctcgtgaggcgagagcctctactc 22365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 5866288 - 5866063
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||     
T  5866288 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacat 5866189  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || |||| ||||||| ||||  |||||   ||    
T  5866188 taacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaaggcattctgtaaca 5866089  T
Q  204 caagggctcgcgaggcgagagcctct 229  Q
    |||  |||||||||||||||||||||    
T  5866088 caaacgctcgcgaggcgagagcctct 5866063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 37116461 - 37116687
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| |||||||    
T  37116461 caacatctcaaacatcatatataattcatgtaatgcatatacaaatatatcacattattaacaacatcaaatcatctaaatcaggcttactgaaacaaca 37116560  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    |||||||||||| ||||||||||||| ||| | | ||||| ||||||||||||||| |||||||||||||||||| |||||||||  | |||| ||||||    
T  37116561 acagtaagataagcaacttagtttcttacccccatgatcatctcacatcaactcgtacgacaaaggtcacatttatcctaacaagcag-tctgtctcaca 37116659  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||||||||||||||    
T  37116660 agggctcgcgaggcgagagcctctactc 37116687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 17141031 - 17141248
Alignment:
Q  12 ctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagta 111  Q
    ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||  ||||| |    
T  17141031 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacattaacagca 17141130  T
Q  112 agataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggct 211  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| || |||| ||||||| |||| ||||||   |||||  |||    
T  17141131 aggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacaaagatcgcattcaacctaaaaaggcgttctgtaacacaaacgct 17141230  T
Q  212 cgcgaggcgagagcctct 229  Q
    ||||||||||||||||||    
T  17141231 cgcgaggcgagagcctct 17141248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 26355679 - 26355533
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacc 135  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||||||    
T  26355679 taatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactagaacaataacaaaaagataaacaacttagtttctaacc 26355580  T
Q  136 tctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||    
T  26355579 tctaagatcaactcacatcaacttgtgcgacaaagatcgcatttaac 26355533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 21491102 - 21491331
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||     
T  21491102 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataggcatcagtcttactggaacat 21491201  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||  | |||||| || |||| ||||||| ||||  |||||   ||    
T  21491202 taacagcaaggtaaacaacttagtttctaacctctaagatcaactcacattaactcgaactacaaagatcgcattcaacctaaaaaggcattctgtaaca 21491301  T
Q  204 caagggctcgcgaggcgagagcctctactc 233  Q
    |||  ||||||||||| |||||||||||||    
T  21491302 caaacgctcgcgaggcaagagcctctactc 21491331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 24353133 - 24353363
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaaca--- 102  Q
    |||||||||||| |||  | | ||||| ||||||| |||||||  ||||| | ||||| ||||||||||| ||||||   |||| ||||||| ||||       
T  24353133 caacatctcaaacatcgtatacaattcatgtaatgcatatacatttatatcatattattaacaacatcaaatcatataattcaggcttactgaaacaaca 24353232  T
Q  103 acaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactc 202  Q
    ||||||||||||||| ||||||||||||| | | | | |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  24353233 acaacagtaagataagcaacttagtttcttatccccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgtctc 24353332  T
Q  203 acaagggctcgcgaggcgagagcctctactc 233  Q
    |||||||||| ||||||||| ||||||||||    
T  24353333 acaagggctcacgaggcgagggcctctactc 24353363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 21249492 - 21249716
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||||| ||  |||     
T  21249492 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttagtgagacat 21249591  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| | | | |||||||||||| |||||||||||||| |||||||||||||| |  |||||||| || |||||||||||| ||||  |||||   ||    
T  21249592 taacagcagggt-aacaacttagttcctaacctctaagataaactcacatcaacttgaacgacaaagatcgcatttaacctaaaaaggcattctgtaaca 21249690  T
Q  204 caagggctcgcgaggcgagagcctct 229  Q
    |||  |||||||||||||||||||||    
T  21249691 caaatgctcgcgaggcgagagcctct 21249716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 21255330 - 21255551
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||||| ||  |||     
T  21255330 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttagtgagacat 21255429  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| | | | |||||||||||| |||||||||||||| ||||||||||||||||  |||||||| || |||||||||||| ||||  |||||    |    
T  21255430 taacagcagggt-aacaacttagttcctaacctctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgtaata 21255528  T
Q  204 caagggctcgcgaggcgagagcc 226  Q
    |||  ||||||||||||||||||    
T  21255529 caaatgctcgcgaggcgagagcc 21255551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 6520475 - 6520662
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||  ||| ||||| |||||||| |||||||||||||||| ||||||||||||  |||||||| |  | |||    |||| ||||||| ||    
T  6520475 gtcatcaacatcataaacatcaa-cataattcatgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaa 6520573  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 189  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||| || |||||||||||||||    
T  6520574 caacaacagcaagataaataacttagtttctaacctccaagatcaactcacatcaactcatgcaacaaagatcgcatttaacctaacaa 6520662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 983401 - 983184
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaa---gat 115  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||  | ||||||   |||| ||||||| ||||||||||  ||   |||    
T  983401 atcaaacataattcatgtaatgtatatacagctatataacattatcaacaacattcaatcatataattcagacttactgaaacaacaacaacaacatgat 983302  T
Q  116 aaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcg 215  Q
    |||||||||||||||  ||||| |||||||||||| |||||||||||||||||| ||||| ||  ||||||||| ||||| || ||| |  | |||||      
T  983301 aaacaacttagtttcctacctccaagatcaactcatatcaactcgtgcgacaaaagtcacgttagacctaacaaagtgttatgtctctcgtgagctcgtc 983202  T
Q  216 aggcgagagcctctactc 233  Q
    ||||||||||||||||||    
T  983201 aggcgagagcctctactc 983184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 21285709 - 21285892
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||||||||| ||| |||||||||||||||| |||||| |||||  ||||| || |  | ||||   |||| ||||||| |||||||    
T  21285709 caacatctcaaacatcaaacatagttcatgtaatgtatatacaattatatatcattaacaacaatattagattatataattcaggcttactgaaacaaca 21285808  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 189  Q
    |||  ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  21285809 acaacaagataaagcacttagtttcttacctctaagatcaactcacatcaactcgtgcgataaagatcgcatttaacctaacaa 21285892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 23760853 - 23760665
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||| |||||  |||||||| |  ||||||  || ||| ||||||| ||||||    
T  23760853 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataccattaacaacaacattagatcatatttattcaggcttactgaaacaac 23760755  T
Q  105 aacagtaaga---taaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||  || |   ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||    
T  23760754 aacaacaacaaggtaaacaacttagtttttaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaacaagg 23760665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 38855260 - 38855097
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||  |||||||| |  | |||    |||| ||||||| |||||||    
T  38855260 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaaca 38855162  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaag 170  Q
    |||| |||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||    
T  38855161 acagcaagataaacaacttagttcctaatgtccaagatcaattcacatcaactcgtgcgacaaag 38855097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 21673816 - 21673995
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    ||||||||||||||||||  ||||||  | |||||||||||||| |||||| |||||  |||||||| |  ||||||  || ||  ||||||| ||||||    
T  21673816 caacatctcaaatatcaat-ataatttatttaatgtatatacaattatataccattaacaacaacattagatcatattaattcaagcttactgaaacaac 21673914  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||  ||||||| ||||||||||| |||||||||| |||||||||||| |||| ||||||||||| || |||||| |||||    
T  21673915 aacaacaagataa-caacttagtttttaacctctaatatcaactcacattaacttgtgcgacaaagatcgcatttatcctaa 21673995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21383917 - 21383996
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||||||||||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  21383917 gtcatcaacatctcaaatatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 21383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 2418852 - 2418713
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttc-taac 134  Q
    ||||| ||||||||  |||| ||||| | ||||||||||| |||| |   |||| | ||||| |||||||||||||| |||||||||||  |||| ||||    
T  2418852 taatgcatatacaatcatatcacattgttaacaacatcaaatcatcttagtcaggcatactg-aacaacaacagtaatataaacaacttcatttcctaac 2418754  T
Q  135 ctctaagatcaactcacatcaactcgtgcgacaaaggtcaca 176  Q
    | | | |||||||||||| | |||||||||||||||||||||    
T  2418753 c-caaggatcaactcacagcgactcgtgcgacaaaggtcaca 2418713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 13508094 - 13508019
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||| || | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  13508094 caacatctcaaatattcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 13508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18862491 - 18862412
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  18862491 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 18862412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21387337 - 21387416
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  21387337 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 21387416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21411210 - 21411289
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  21411210 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 21411289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21805702 - 21805781
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  21805702 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 21805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21827860 - 21827781
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  21827860 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 21827781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 17439514 - 17439438
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatat 82  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||| ||||| ||||||| | |||||| || ||||||    
T  17439514 caacatctcaaacatcatatataattcatgtaatgcatatacaaatatatcacattattatcaacattaaatcatat 17439438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 13597626 - 13597551
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||| ||||||| || | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  13597626 caacatcccaaatattcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 13597551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 1189 - 1379
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  1189 gtcatcaacatttcaaacatcaaacataattcatggaatgtatatacaactatataacattaacaacaacatcaaatcatatacatcagtcttactggaa 1288  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||  |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  1289 caacaacaacaagataaaaaacttagtttcttacctctaagatcaactcacatcaactcgtgtgacaaagatcgcatttaacctaacaagg 1379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 22684 - 22509
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    ||||||||||||||||||||    
T  22684 gtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaat----atgcatcagtcttactggaa 22589  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacattta 180  Q
    || |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  22588 cagcaacatcaagacaaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattta 22509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 4e-68; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 28496485 - 28496260
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||     
T  28496485 atcaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaattcatatgcatcagtcttactggaacat 28496386  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactc 202  Q
     ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||| |||||||  |||||   |    
T  28496385 taacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgca-ttaacctaaacaaggcattctgtaac 28496287  T
Q  203 acaagggctcgcgaggcgagagcctct 229  Q
    |||||  ||||||||||||||||||||    
T  28496286 acaagtactcgcgaggcgagagcctct 28496260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 29808896 - 29808671
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||     
T  29808896 atcaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaattcatatgcatcagtcttactggaacat 29808797  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactc 202  Q
     ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||| |||||||  |||||   |    
T  29808796 taacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgca-ttaacctaaacaaggcattctgtaac 29808698  T
Q  203 acaagggctcgcgaggcgagagcctct 229  Q
    |||||  ||||||||||||||||||||    
T  29808697 acaagtactcgcgaggcgagagcctct 29808671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 19652306 - 19652485
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| ||||| |||||| | | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19652306 caacatctcaaacatcaa-cataatccatttaaagtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaacaata 19652404  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  19652405 acagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaa 19652485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 1561410 - 1561593
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa-ttcatatgcatcagtcttactggaaca 102  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||| |    
T  1561410 atcaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaaattcatatgcatcagtcttactggaata 1561509  T
Q  103 acaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
      ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  1561510 ttaacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaa 1561593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 19668505 - 19668676
Alignment:
Q  27 taattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttag 126  Q
    |||||| |||||||||||||||||||||||||||||| |||||||  |  |||||| |||||| ||||||| ||||||||||| ||||||||||||||||    
T  19668505 taattcatgtaatgtatatacaactatataacattatcaacaacactacatcatatacatcagacttactgaaacaacaacagcaagataaacaacttag 19668604  T
Q  127 tttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 198  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19668605 tttcttacctccaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 19668676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 20109245 - 20109479
Alignment:
Q  1 gtcatcaacatctcaaatat-caaacataattcgtgtaatgtatatacaac--tatataacattataaacaacatcaattcatatgcatcagtcttactg 97  Q
    |||||||||||||||||||| || | |||||||  |||||||||||||||   ||||| ||||||||||||||||||||| |||| |||||||||||||     
T  20109245 gtcatcaacatctcaaatattcatatataattcaagtaatgtatatacaatattatatcacattataaacaacatcaattgatatacatcagtcttacta 20109344  T
Q  98 gaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttct 197  Q
    |||  ||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||    
T  20109345 gaaagacatcagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacaataaacttaacaagg-gttct 20109443  T
Q  198 gactcacaagggctcgcgaggcgagagcctctactc 233  Q
    | ||| || | ||||| |||||||||||||||||||    
T  20109444 gtctctcatgagctcgtgaggcgagagcctctactc 20109479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 26 - 233
Target Start/End: Original strand, 23076864 - 23077070
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| ||||||||||||||||||| ||| |||    
T  23076864 ataattcatgtaatgcatatacaaatatatcacattattaacaacatcaaatcatctatatcaggcttactgaaacaacaacagtaagataagcaaatta 23076963  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagc 225  Q
    |||||| ||| | | ||||||||||||||||||| ||| |||||||||||||||| |||||||||  | |||| ||||||||||||||| ||||||||||    
T  23076964 gtttcttacccccatgatcaactcacatcaactcatgcaacaaaggtcacatttatcctaacaagcag-tctgtctcacaagggctcgcaaggcgagagc 23077062  T
Q  226 ctctactc 233  Q
    ||||||||    
T  23077063 ctctactc 23077070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 26 - 233
Target Start/End: Original strand, 35008282 - 35008488
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| ||||| ||||||||||||| |||||||    
T  35008282 ataattcatgtaatgaatatacaaatatatcacattattaacaacatcaaatcatctatatcaggcttactgaaacaataacagtaagataagcaactta 35008381  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagc 225  Q
    |||||| ||| | | ||||||||||||||||||||||| |||||||||||||||| |||||||||  | |||| |||||||  |||||||||||||||||    
T  35008382 gtttcttacccccatgatcaactcacatcaactcgtgcaacaaaggtcacatttatcctaacaagcag-tctgtctcacaacagctcgcgaggcgagagc 35008480  T
Q  226 ctctactc 233  Q
    ||||||||    
T  35008481 ctctactc 35008488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 23019513 - 23019699
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    |||| |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||  ||| |||| |  | ||||   |||| ||||||| ||    
T  23019513 gtcaacaacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacgacattagattatatagttcaggcttactgaaa 23019612  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaac 187  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||||    
T  23019613 caacaacagcaagataaacaacttagtttctaacctccaagatcaactcacatcaactcgttcgacaaagatcgcatttaacctaac 23019699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 9098454 - 9098307
Alignment:
Q  86 tcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaaccta 185  Q
    |||| ||||||| ||||| ||| | ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  9098454 tcaggcttactgaaacaataactgcaagataaacaaattagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtgacaataaaccta 9098355  T
Q  186 acaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||| ||| || | ||||| |||||||||||||||||||    
T  9098354 acaaggtgttctgtctctcatgagctcgtgaggcgagagcctctactc 9098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 91 - 233
Target Start/End: Complemental strand, 22080663 - 22080520
Alignment:
Q  91 cttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 189  Q
    ||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||   ||| |||||    
T  22080663 cttactgaaacaacaagagcaagataagcaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcattattcctaaacaa 22080564  T
Q  190 ggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||| |  |||   |||||||||||||||||||||||||    
T  22080563 ggtgttctgtcagacacaagctcgcgaggcgagagcctctactc 22080520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 27333214 - 27333111
Alignment:
Q  86 tcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaaccta 185  Q
    |||| ||||||| |||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  27333214 tcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttaaccta 27333115  T
Q  186 acaa 189  Q
    ||||    
T  27333114 acaa 27333111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 27393954 - 27393851
Alignment:
Q  86 tcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaaccta 185  Q
    |||| ||||||| |||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  27393954 tcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttaaccta 27393855  T
Q  186 acaa 189  Q
    ||||    
T  27393854 acaa 27393851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 18204221 - 18204354
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacc 135  Q
    ||||| |||||||  ||||| ||||||| ||||||||||| |||| | |||||| ||||||| ||||||||||| |  |||| ||||||  ||||  |||    
T  18204221 taatgcatatacatttatatcacattattaacaacatcaaatcatttacatcagacttactgaaacaacaacagcagtataagcaacttcatttcctacc 18204320  T
Q  136 tctaagatcaactcacatcaactcgtgcgacaaa 169  Q
     | | |||||||||||| ||||||||||||||||    
T  18204321 ccaaggatcaactcacaacaactcgtgcgacaaa 18204354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 23528020 - 23527888
Alignment:
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgac 200  Q
    |||||||||||| |||||||||||  ||||  ||| | | |||||||||||  ||||||||||||||||| ||||||  ||||| |||||||  |||| |    
T  23528020 caacaacagtaacataaacaacttcatttcctaccccaaggatcaactcaccacaactcgtgcgacaaagatcacatgaaacctgacaaggtagtctgtc 23527921  T
Q  201 tcacaagggctcgcgaggcgagagcctctactc 233  Q
    || || | ||| |||||||||| ||||||||||    
T  23527920 tctcaggagcttgcgaggcgagggcctctactc 23527888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 4668135 - 4668038
Alignment:
Q  94 actggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||| |||||| | | ||  ||||||||||  |||| ||||||||||||||||| ||||||||||||||| | || ||||||||||| |||||    
T  4668135 actggaacatcaacagcatgctaggcaacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaacctagcaagg 4668038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 4674982 - 4674885
Alignment:
Q  94 actggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||| |||||| | | ||  ||||||||||  |||| ||||||||||||||||| ||||||||||||||| | || ||||||||||| |||||    
T  4674982 actggaacatcaacagcatgctaggcaacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaacctagcaagg 4674885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 18177650 - 18177517
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacc 135  Q
    ||||| |||||||  ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| ||||||||||| |  |||| ||||||  ||||  |||    
T  18177650 taatgcatatacatttatatcacattattaacaacatcaaatcatttatatcagacttactgaaacaacaacagcagtataagcaacttcatttcctacc 18177551  T
Q  136 tctaagatcaactcacatcaactcgtgcgacaaa 169  Q
     | | |||||||||||| ||||||||||||||||    
T  18177550 ccaaggatcaactcacaacaactcgtgcgacaaa 18177517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 18199394 - 18199261
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacc 135  Q
    ||||| |||||||  ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| ||||||||||| |  |||| ||||||  ||||  |||    
T  18199394 taatgcatatacatttatatcacattattaacaacatcaaatcatttatatcagacttactgaaacaacaacagcagtataagcaacttcatttcctacc 18199295  T
Q  136 tctaagatcaactcacatcaactcgtgcgacaaa 169  Q
     | | |||||||||||| ||||||||||||||||    
T  18199294 ccaaggatcaactcacaacaactcgtgcgacaaa 18199261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 28103877 - 28103796
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataa 117  Q
    ||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| ||||||| |||||||||||||||||||    
T  28103877 taatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataa 28103796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 31155320 - 31155223
Alignment:
Q  94 actggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||| |||||| ||| ||  ||||||||||  |||| ||||| |||| |||||| ||||||||||||||| |  | |||||||||||||||||    
T  31155320 actggaacatcaacagcaagctaggcaacttagttcttaacatctaaaatcatctcacaacaactcgtgcgacaaggaccgcatttaacctaacaagg 31155223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 4185720 - 4185648
Alignment:
Q  119 caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||||  |||| ||||||||||||||||| ||||||||||| ||| | || ||||||||||| |||||    
T  4185720 caacttagttcttaacatctaagatcaactcacaacaactcgtgcggcaaggatcgcatttaacctagcaagg 4185648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 8227520 - 8227445
Alignment:
Q  6 caacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||| ||| | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  8227520 caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 8227445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22949405 - 22949484
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  22949405 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 22949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22953361 - 22953440
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  22953361 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 22953440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23871849 - 23871928
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  23871849 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 23871928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23875805 - 23875884
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  23875805 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 23875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27325449 - 27325370
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||  || ||| |||||| || |||||||||||||||| | |||||| ||||    
T  27325449 gtcatcaacatctcaatcatcaaacataattaatgcaatatatatataattatataacattataaatatcatcaaatcat 27325370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 23539165 - 23539243
Alignment:
Q  91 cttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaa 169  Q
    ||||||| ||||||||| |||| |||||||||||  ||||  ||| | | |||||||||||| ||||||||||||||||    
T  23539165 cttactgaaacaacaactgtaatataaacaactttatttcctaccccaaggatcaactcacaacaactcgtgcgacaaa 23539243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 9098509 - 9098466
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacatta 62  Q
    |||||||||||||| ||||||||||||| || ||||||||||||    
T  9098509 atcaaacataattcatgtaatgtatatataattatataacatta 9098466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16624590 - 16624669
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||| ||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  16624590 gtcatcaacatcttaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 16624669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16760555 - 16760634
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  16760555 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 16760634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 18706418 - 18706493
Alignment:
Q  7 aacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatat 82  Q
    ||||||| ||| |||| | ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||    
T  18706418 aacatcttaaacatcatatataattcatgtaatgcatatacatttatatgacattattaacaacatcaaatcatat 18706493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 4189203 - 4189252
Alignment:
Q  142 atcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||||| ||||||||||||||| | || ||||||||||| |||||    
T  4189203 atcaactcacaacaactcgtgcgacaacgatcgcatttaacctagcaagg 4189252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21939488 - 21939553
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaa 66  Q
    ||||||||||| ||||  |||||||||||||| || ||| |||||  || ||||||||||||||||    
T  21939488 gtcatcaacatttcaatcatcaaacataattcatgcaatatatatctaattatataacattataaa 21939553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 132808 - 132943
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  132808 tatacaacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 132907  T
Q  151 catcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||||||||||||||| |||||||||||||||    
T  132908 catcaactcgtgcgacaaagatcacatttaacctaa 132943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 168
Target Start/End: Original strand, 62307 - 62469
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgca-tcagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||  |||| ||| | ||||||   | |||| ||||||| ||||||    
T  62307 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataacattaacaacatcattagttcataacaattcaggcttactgaaacaac 62405  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaa 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  62406 aacagcaagataaacaacttagtttctaacctctaagatcaactcacatcgaatcgggcgacaa 62469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 241 - 416
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  241 caacatctcaaatatcaaacataattcatgtaatgtatatacaattatataatattataaacaacatcaattcatatgtatcagtctcactagaacaaca 340  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  341 acagcaagat-aacaactcagtttctaacctctaagatcaactcacatcaactcgtacgacaaagatcgcatttaac 416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 28775 - 28596
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  28775 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactca 28676  T
Q  151 catcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||||||||||||||| || |||||||||| |||||||  |||||   ||||||  ||||||||||||||||||||    
T  28675 catcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctct 28596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 7 - 233
Target Start/End: Original strand, 119 - 345
Alignment:
Q  7 aacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaa 106  Q
    ||||||||||| |||| | ||||||| ||||||| |||||||  ||||||||||||| ||||||||||| |||| |   | || ||||||| ||||||||    
T  119 aacatctcaaacatcatatataattcatgtaatgcatatacatttatataacattattaacaacatcaaatcatttaatttaggcttactgaaacaacaa 218  T
Q  107 cagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaa 206  Q
    ||||||||||  ||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  219 cagtaagatatgcaacttagtttcttacccccatgatcaactcacatcaacttgtgcgacaaaggtcacatttaacctaacaaggtattctgtctcacaa 318  T
Q  207 gggctcgcgaggcgagagcctctactc 233  Q
    |||||| ||||||||||||||||||||    
T  319 gggctcacgaggcgagagcctctactc 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 6291 - 6064
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||  ||||||||||| ||||||   |||| ||||||| |||||||    
T  6291 caacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattaataacaacatcaaatcatataattcaggcttactgaaacaaca 6192  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    ||||| |||||| ||||||||||||| ||| | | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||     
T  6191 acagtgagataagcaacttagtttcttacccccatgatcatctcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctatctcact 6092  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||| ||||||||||||||    
T  6091 agggctcgcgaggtgagagcctctactc 6064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 18246 - 18019
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||  |||||||||||  |||||   |||| ||||||| |||||||    
T  18246 caacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattaataacaacatcaaaacatataattcaggcttactgaaacaaca 18147  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    ||||| |||||| ||||||||||||| ||| | | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  18146 acagtgagataagcaacttagtttcttacccccatgatcatctcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctgtctcact 18047  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||||||||| ||||    
T  18046 agggctcgcgaggcgagagcctccactc 18019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 13046 - 13236
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||||| |  | ||     |||| ||||||| ||    
T  13046 gtcatcaacatcataaacatcaaacataattcgtgtaatgtatatacaattatataacattagcaacaacattagattatccaattcaggcttactgaaa 13145  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||| |||||||| |||||||||||||| ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13146 caacaacagcaagataaataacttagtttctaatctccatgatcaactcacatcaactcgtgtgacaaagatcacatttaacctaacaagg 13236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 97119 - 97344
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| |||||||    
T  97119 caacatctcaaacatcatatataattcatgtaatgcatatacaaatatatcacattattaacaacatcaaatcatctatatcaggcttactgaaacaaca 97218  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    ||||||||| || ||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||| |||| ||||  ||| || ||||||    
T  97219 acagtaagaaaagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatcctagcaagcagtt-tgtctcaca 97316  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||||||||||||||    
T  97317 agggctcgcgaggcgagagcctctactc 97344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 106397 - 106622
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| |||||||    
T  106397 caacatctcaaacatcatatataattcatgtaatgcatatacaaatatatcacattattaacaacatcaaatcatctatatcaggcttactgaaacaaca 106496  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    ||||||||| || ||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||| |||| ||||  ||| || ||||||    
T  106497 acagtaagaaaagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatcctagcaagcagtt-tgtctcaca 106594  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||||||||||||||    
T  106595 agggctcgcgaggcgagagcctctactc 106622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 38430 - 38657
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||    ||||||||| ||||||   |||| ||||||| |||||||    
T  38430 caacatctcaaacatcatatataattcatgtaatgcatatacatatatatcacattaatctcaacatcaaatcatataattcaggcttactgaaacaaca 38529  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcaca 205  Q
    |||||||||||| ||||||||||||| ||| |   ||||||||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||    
T  38530 acagtaagataagcaacttagtttcttacccccgtgatcaactcacatcaactcgtgcgataaaggtctcatttaacccaacaaggtattctgtctcaca 38629  T
Q  206 agggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||||||||||||||||||    
T  38630 agggctcgcgaggcgagagcctctactc 38657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 78454 - 78648
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||   |||| ||||||| ||||||||||||||||||| |||||||    
T  78454 ataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataagcaactta 78553  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcg 220  Q
    ||| || ||| | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  78554 gttgcttacccccatgatcaactcacatcaactcatgcgacaaaggtcacatttaacctaacaaggtgttctgtctcacaagtgctcgcgaggcg 78648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 128978 - 128752
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||| | ||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| ||||||| |||||||    
T  128978 caacatctcaaacatcatatataattcatgtaatggatatacaaatatatcacattattaacaacatcaaatcatctaaatcaggcttactgaaacaaca 128879  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcac 204  Q
    |||||||||||| ||||||||||||| ||| | | |||||||||| | || |||||||||||||| || ||   ||||| |||||||| ||||| || ||    
T  128878 acagtaagataagcaacttagtttcttacc-ccatgatcaactcataacatctcgtgcgacaaagatcgca-acaacctaaacaaggtattctgtcttac 128781  T
Q  205 aagggctcgcgaggcgagagcctctactc 233  Q
    | | |||||||||||||||||||||||||    
T  128780 aggagctcgcgaggcgagagcctctactc 128752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 12873 - 13106
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||  ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  ||||||   |||| ||||||||||    
T  12873 gtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattaataacaacattagatcatataattcaggcttactggaa 12972  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctga 199  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||| |||||  || ||     
T  12973 caacaacagcaagataaaccacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagattgcatttaacctaaacaaggcattttgt 13072  T
Q  200 ctcacaagggctcgcgaggcgagagcctctactc 233  Q
      ||||||  |||| |||||||||||| ||||||    
T  13073 aacacaagtactcgtgaggcgagagcccctactc 13106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 103634 - 103455
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaa 118  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||  |||||||| || ||||||   |||| ||||||| ||||||||||| ||||||||    
T  103634 atcatacataattcatgtaatgtatatacaactacataacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaggaagataaa 103535  T
Q  119 caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 198  Q
     |||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  103534 gaacttagtttcctacctccaagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaacaaggtgttctg 103455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 10634 - 10824
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||| ||||||  |||||||| |  | ||||   |||| ||||||| ||    
T  10634 gtcatcaacatctcaaacatcgaacataattcatgtaatgtatatacaattatatgacattaacaacaacattagattatataattcaggcttactgaaa 10733  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  10734 caacaacagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacagagatcgcatttaacctaacaagg 10824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 107; Significance: 9e-54; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 24 - 197
Target Start/End: Complemental strand, 136359 - 136185
Alignment:
Q  24 acataattcgtgtaatgtatatacaactatataacattataaacaacatcaat-tcatatgcatcagtcttactggaacaacaacagtaagataaacaac 122  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||||| ||  ||||||   |||| ||||||| ||||||||||| ||||||||||||    
T  136359 acataattcatgtaatgtatatacaactatataacattaacaacaacattaaaatcatataattcaggcttactgaaacaacaacagcaagataaacaac 136260  T
Q  123 ttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttct 197  Q
    ||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  136259 ttagtttcctacctccaagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaacaaggtgttct 136185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 24 - 197
Target Start/End: Complemental strand, 145067 - 144893
Alignment:
Q  24 acataattcgtgtaatgtatatacaactatataacattataaacaacatcaat-tcatatgcatcagtcttactggaacaacaacagtaagataaacaac 122  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||||| ||  ||||||   |||| ||||||| ||||||||||| ||||||||||||    
T  145067 acataattcatgtaatgtatatacaactatataacattaacaacaacattaaaatcatataattcaggcttactgaaacaacaacagcaagataaacaac 144968  T
Q  123 ttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttct 197  Q
    ||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  144967 ttagtttcctacctccaagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaacaaggtgttct 144893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 15768 - 15993
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| | |||||| | ||||||||||||||| ||     
T  15768 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattatttcataagaatcagtcttactggatcat 15867  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactca 203  Q
     ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||  |||||| ||||  |||||   ||    
T  15868 taacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattccacctaaaaaggcattctgtaaca 15967  T
Q  204 caagggctcgcgaggcgagagcctct 229  Q
    |||  |||||||||||||||||||||    
T  15968 caaaagctcgcgaggcgagagcctct 15993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 2267 - 2088
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactca 150  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| ||||||    
T  2267 tatacaacattataaacaacatcaattcatatgcatcagtcttactgggataagatcagtaagataaacaacttagtttctaacctctaagattaactca 2168  T
Q  151 catcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||| ||||||||||||| | || |||||||||| |||||||  |||||   ||||||  ||||||||||||||||||||    
T  2167 catccactcgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctct 2088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 32647 - 32832
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaaca 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||  || ||||| |  | ||||   |||| ||||||| ||||| |    
T  32647 caacatctcaaacatcaaacataattcatgtaatgtatatacaactatataacattaacaaaaacattagattatataattcaggcttactgaaacaata 32746  T
Q  106 acagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    |||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  32747 acaacaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacccaacaagg 32832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 233
Target Start/End: Complemental strand, 8047 - 7840
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    |||||||  |||||||||||| || ||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||| ||| |||||||||||||||    
T  8047 ataattcaagtaatgtatataaaattatatcacattataaacaacatcaaatcatatacatcagtctcactggaacaacatcagcaagataaacaactta 7948  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagg--gctcgcgaggcgaga 223  Q
    |||||  |||||||||||||||||||||||| || |||||||||| || ||||||||||| |||||  |||||    ||||||   ||||||||||||||    
T  7947 gtttcatacctctaagatcaactcacatcaattcttgcgacaaagatcgcatttaacctagcaaggcattctg--gaacaaggtaactcgcgaggcgaga 7850  T
Q  224 gcctctactc 233  Q
    ||||||||||    
T  7849 gcctctactc 7840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 29286 - 29066
Alignment:
Q  12 ctcaaatatcaaacataattcgtgtaatgtatatacaactatataacat---tataaacaacatcaattcatatgcatcagtcttactggaacaacaaca 108  Q
    ||||| |||||||| ||| || |||| ||||||||||| ||||||||||   ||||| |||||| |||||||| ||||||||||||||||||||  ||||    
T  29286 ctcaattatcaaacttaagtcatgtactgtatatacaattatataacataattataagcaacattaattcataagcatcagtcttactggaacattaaca 29187  T
Q  109 gtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagg 208  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || |||| ||||||| ||||  |||||   |||||      
T  29186 gcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaaggcattctgtaacacaaac 29087  T
Q  209 gctcgcgaggcgagagcctct 229  Q
    |||| ||||||||||||||||    
T  29086 gctcacgaggcgagagcctct 29066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 8062 - 7900
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaactta 125  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||| || ||||||   |||| ||||||| ||||||| ||   ||||||||||||||    
T  8062 ataattcatgtaatgtatatacaactatataacattatcaacaacattaaatcatataattcaggcttactgaaacaacagca---agataaacaactta 7966  T
Q  126 gtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  7965 gtttcttacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaccctaacaagg 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 2227 - 1999
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgca-tcagtcttactggaacaac 104  Q
    |||||||||||||||||  |||||||| | |||||||||||||| |||||| |||||  ||||||||    ||||||  | |||| ||||||| ||||||    
T  2227 caacatctcaaatatcag-cataattcatataatgtatatacaattatataccattaacaacaacattggatcatattaaatcaggcttactgaaacaac 2129  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactca 203  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||  |||||   ||    
T  2128 aacagcaagataaacaacttattttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaaca 2029  T
Q  204 caagggctcgcgaggcgagagcctctactc 233  Q
    ||||  |||||||||||||| |||||||||    
T  2028 caagtactcgcgaggcgagaccctctactc 1999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 11399 - 11586
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||| | ||||||||||||||| |||||| |||||||| |||||||||||||| |||||     
T  11399 atcaacaactcaattatcaaacttaagtcatgtaatgtatatactattatataacattataagcaacattaattcataagcatcagtcttacttgaacat 11498  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
     ||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| || |||| ||||||| ||||    
T  11499 taacaccaaggtaaacaacttagtttctaacctctaagattaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaagg 11586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 2104 - 2233
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| || |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||| ||||||||||||     
T  2104 atcaacaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagacttactggaacat 2203  T
Q  104 caacagtaagataaacaacttagtttctaa 133  Q
     ||||| ||| |||||||||||||||||||    
T  2204 taacagcaaggtaaacaacttagtttctaa 2233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 2448 - 2231
Alignment:
Q  12 ctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagta 111  Q
    ||||| |||||||| ||| || | |||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||  || || |    
T  2448 ctcaattatcaaacttaagtcatttaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacattaatagca 2349  T
Q  112 agataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggct 211  Q
    || |||| |||||||||||||||||||||||||||||||||| ||||||  || ||||| || |||| ||||||| ||||  |||||   ||||   |||    
T  2348 aggtaaaaaacttagtttctaacctctaagatcaactcacataaactcgaacggcaaagatcgcattcaacctaaaaaggcattctgtaacacacacgct 2249  T
Q  212 cgcgaggcgagagcctct 229  Q
    ||||||||||||||||||    
T  2248 cgcgaggcgagagcctct 2231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 32248 - 32345
Alignment:
Q  51 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaact 148  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32248 tatacaacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaact 32345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 19865 - 19701
Alignment:
Q  34 tgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaa 133  Q
    ||||||| |||||||  ||||| ||||||| || |||||||| ||||||   |||  ||||||||||||||||||||||||||| ||||||||||||| |    
T  19865 tgtaatgcatatacatttatatcacattattaataacatcaaatcatataattcatgcttactggaacaacaacagtaagataagcaacttagtttctta 19766  T
Q  134 cctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 198  Q
    || | |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19765 cccccaagatcaactcatatcaacccgtgcgacaaaggtcacatttaacctaacaaggtgttctg 19701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 49000 - 48921
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  49000 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 48921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 34230 - 34417
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaa 103  Q
    ||||||| ||||| |||||||| ||| ||  ||||| ||||||||| ||||||||||||||| |||||| |||||||| |||||||||||||||||| |     
T  34230 atcaacaactcaattatcaaacttaagtcaagtaatatatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaaaat 34329  T
Q  104 caacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
     ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |  | |||||| || |||| ||||||| ||||    
T  34330 taacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactagaacaacaaagatcgcattcaacctaaaaagg 34417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 40183 - 40003
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||| |||||  |||||||| |  ||||||  || ||| ||||||| ||||||    
T  40183 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataccattaacaacaacataagatcatattaattcaggcttactgaaacaac 40085  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  40084 aacatcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcaacaaagatcgcatttaacctaa 40003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 100486 - 100662
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatc-agtcttactggaacaac 104  Q
    ||||||||||||||| || |||||||| | |||||||||||||| ||||||||||||  |||||||| |  ||||||  ||  || ||||||| ||||||    
T  100486 caacatctcaaatattaa-cataattcatataatgtatatacaattatataacattaacaacaacattagatcatattaatttaggcttactgaaacaac 100584  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    ||||  |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||    
T  100585 aacaacaagataaacaacttagtttctaacctctaagagcaagtcacatcaactcgtgcgacaaagatcgcatttaac 100662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 101578 - 101685
Alignment:
Q  78 catatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacat 177  Q
    |||| |||| ||||||| | |||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  101578 cataggcattagtcttaattgaacaacaacaacaagagaa-caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacat 101676  T
Q  178 ttaacctaa 186  Q
    |||||||||    
T  101677 ttaacctaa 101685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 1778 - 1614
Alignment:
Q  34 tgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaa 133  Q
    ||||||| |||||||  ||||| ||||||| |||||| |||| ||||||   |||| |||||||||||||||| |||||||||  ||||||||||||| |    
T  1778 tgtaatgcatatacatttatatcacattattaacaacgtcaaatcatataattcaggcttactggaacaacaatagtaagataggcaacttagtttctta 1679  T
Q  134 cctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctg 198  Q
    ||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1678 ccctcaagatcaactcacatcaactcgtgcgacaaaggtcacatgtaacctaacaaggtgttctg 1614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 233
Target Start/End: Complemental strand, 2734 - 2585
Alignment:
Q  85 atcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct 184  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  |||    
T  2734 atcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttttcct 2635  T
Q  185 -aacaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
     |||||||  |||||   ||||||  ||||||||||||||||||||||||    
T  2634 aaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctactc 2585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 2654 - 2474
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||| |||||  |||||||| |  ||||||  || ||| ||||||| ||||||    
T  2654 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaac 2556  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    | ||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||| |||||    
T  2555 atcagcaagataaacaacttaatttctaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaa 2474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 742 - 888
Alignment:
Q  86 tcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaaccta 185  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||| |||  || ||||||||||||||||||||||||||||||||| |||||||||||    
T  742 tcaggcttactgaaacaacaacagttagataaacaacttagtttcttacca-tatgatcaactcacatcaactcgtgcgacaaaggtctcatttaaccta 840  T
Q  186 acaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    ||||||||||||| || |||   |||||||||| ||| ||||||||||    
T  841 acaaggtgttctgtctaacactagctcgcgaggtgagggcctctactc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 6736 - 6903
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaa 118  Q
    |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  ||||||   |||  ||||||  ||||||||||| ||||||||    
T  6736 atcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaa 6835  T
Q  119 caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||| |||||| ||| ||| |||||||||||||||||||||||||||| || ||||||||||||    
T  6836 caacttagattctaatctccaagttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaa 6903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 14116 - 14283
Alignment:
Q  19 atcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaa 118  Q
    |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  ||||||   |||  ||||||  ||||||||||| ||||||||    
T  14116 atcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaa 14215  T
Q  119 caacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||| |||||| ||| ||| |||||||||||||||||||||||||||| || ||||||||||||    
T  14216 caacttagattctaatctccaagttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaa 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 19376 - 19552
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgca-tcagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||| |||||  |||||||| |  ||||||  | ||||  |||||| ||||||    
T  19376 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaaatcagggttactgaaacaac 19474  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||    
T  19475 aacatcaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaaggatcgcatttaac 19552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 26 - 233
Target Start/End: Original strand, 267793 - 267990
Alignment:
Q  26 ataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatc-agtcttactggaacaacaacagtaagataaacaactt 124  Q
    ||||||| ||||||| |||||||  ||||| ||||||| |||| |||||| |||||| |||| || ||||||| ||||||| ||||||| ||| ||||||    
T  267793 ataattcatgtaatgcatatacatttatatcacattattaacaccatcaaatcatat-catccaggcttactgaaacaacagcagtaagctaagcaactt 267891  T
Q  125 agtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagag 224  Q
    ||||||| |||  || |||||          ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  267892 agtttcttacccttatgatca----------actcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctcacaaggactcgcgaggcgagag 267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 14706 - 14526
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgca-tcagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||| | |||||| |||||  || ||||| |  ||||||  | |||| ||||||| ||||||    
T  14706 caacatctcaaatatcaa-cataattcatataatgtatatactattatataccattaacaaaaacattagatcatattaaatcaggcttactgaaacaac 14608  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||| |||||    
T  14607 aacagcaagatatacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgaccaagatcgcatttatcctaa 14526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 5755 - 5934
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcat-cagtcttactggaacaac 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||| |||||  |||||||| |  ||||||  || ||| ||||||| ||||||    
T  5755 caacatctcaaatatcaa-cataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaac 5853  T
Q  105 aacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||||  |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||   ||||||||| |||||    
T  5854 aacaacaagataaa-aacttagtttttaacctctaagatcaactcacatcaacttgtgcgacaagaatcacatttagcctaa 5934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 6137 - 5952
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaa 100  Q
    ||||| ||||||  ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| |  | |||    |||| ||||||| ||    
T  6137 gtcattaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaa 6038  T
Q  101 caacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    ||| ||||| |||||||| |||||||||| ||||||| |||||||||| ||||||||| | ||||||||| || ||||||||||||    
T  6037 caataacagcaagataaataacttagtttttaacctccaagatcaactaacatcaacttgcgcgacaaagatcgcatttaacctaa 5952  T

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Target: scaffold0020 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 15761 - 15665
Alignment:
Q  86 tcagtcttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaac 182  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  15761 tcaggcttactgaaacaacaacagcaagataaacaacttagtttctaatctccaagatcaactcacatcaactcgtgcgacaaagatcacatttaac 15665  T

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Target: scaffold0530 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 1048 - 864
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatca-attcatatgcatcagtcttactgga 99  Q
    ||||||||||||  ||| |||||||||||||| |||||||||||||||| ||||||||||||  |||||||| | ||| | |    |||| ||||||| |    
T  1048 gtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagatttacaat--tcaggcttactgaa 951  T
Q  100 acaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 186  Q
    |||||||||  |||||||| ||||||||||||||| || |||||||||| ||||||||| | ||||||||| || ||||||||||||    
T  950 acaacaacaacaagataaataacttagtttctaacttccaagatcaactaacatcaacttgcgcgacaaagatcgcatttaacctaa 864  T

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Target: scaffold0123 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 25353 - 25445
Alignment:
Q  141 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgactcacaagggctcgcgaggcgagagcctctactc 233  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||| ||||| |||||||||    
T  25353 gatcaactcacaacaactcgtgcgacaaaggtcacatttatcctaacaaggtattatgtctcacaagggctcgcgagacgagaacctctactc 25445  T

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Target: scaffold0123; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 650 - 725
Alignment:
Q  7 aacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcatat 82  Q
    ||||||||||| |||| | ||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| ||||||    
T  650 aacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatat 725  T

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Target: scaffold0123; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 25219 - 25276
Alignment:
Q  6 caacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattat 63  Q
    |||||||||||| |||| | ||||||| |||||||||||||||| ||||| |||||||    
T  25219 caacatctcaaacatcatatataattcatgtaatgtatatacaaatatatcacattat 25276  T

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Target: scaffold1419 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 165 - 297
Alignment:
Q  36 taatgtatatacaactatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagtaagataaacaacttagtttctaacc 135  Q
    ||||| |||||||| ||||| ||||||| ||||||||||| |||| |  ||||| |||||| ||||||||| ||||| |||||||||||  ||||  |||    
T  165 taatgcatatacaattatatcacattattaacaacatcaaatcatctatatcaggcttact-gaacaacaatagtaatataaacaacttcatttcctacc 263  T
Q  136 tctaagatcaactcacatcaactcgtgcgacaaa 169  Q
     | | |||| ||||||| ||||||||||||||||    
T  264 ccaaggatcgactcacaacaactcgtgcgacaaa 297  T

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Target: scaffold0475 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 9275 - 9372
Alignment:
Q  94 actggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 191  Q
    ||||||||| |||||| | | ||  ||||||||||  |||| ||||||||||||||||| ||||||||||||||| | || ||||||||||| |||||    
T  9275 actggaacatcaacagcatgctaggcaacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaacctagcaagg 9372  T

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Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 11576 - 11651
Alignment:
Q  6 caacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||| ||| | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  11576 caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 11651  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 18036 - 17961
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||| || | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  18036 caacatctcaaatattcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 17961  T

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Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 10158 - 10245
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | |||||||| |||||||| || |||||||||| |||||||  |||||   |||||| |||||||||||||||||||||    
T  10158 tcaactcataacaactcgtacgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctct 10245  T

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Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 1083 - 1013
Alignment:
Q  4 atcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa 75  Q
    ||||||| ||||| ||||| || ||| || |||||||||||||||| ||||||||||||| |||||||||||    
T  1083 atcaacaactcaattatcagacttaagtcatgtaatgtatatacaattatataacattat-aacaacatcaa 1013  T

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Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 9707 - 9620
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgactcacaagggctcgcgaggcgagagcctct 229  Q
    |||||||| | ||||||||||||||||| ||||||||||||||| |||||  |||||    || || |||||||||||||||||||||    
T  9707 tcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctct 9620  T

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Target: scaffold0166; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9849 - 9784
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaa 66  Q
    ||||||||||| ||||  |||||||||||||| || ||| |||||  || ||||||||||||||||    
T  9849 gtcatcaacatttcaatcatcaaacataattcatgcaatatatatctaattatataacattataaa 9784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 38265 - 38190
Alignment:
Q  6 caacatctcaaata-tcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||| ||| | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  38265 caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 38190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 207534 - 207467
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaaca 68  Q
    ||||||||||| ||||  |||||||||||||| || ||| |||||| || ||||||||||||||||||    
T  207534 gtcatcaacatttcaatcatcaaacataattcatgcaatatatatataattatataacattataaaca 207467  T

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Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 27 - 92
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaa 66  Q
    ||||||||||||||||  |||||||||||||| || ||| |||||  || ||||||||||||||||    
T  27 gtcatcaacatctcaatcatcaaacataattcatgcaatatatatctaattatataacattataaa 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 26847 - 26916
Alignment:
Q  154 caactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgag 222  Q
    ||||||| ||||||||| ||||||||||||| |||||||  |||||||| ||| | ||||||||||||||    
T  26847 caactcgcgcgacaaagatcacatttaacctaaacaaggcattctgacttacaggagctcgcgaggcgag 26916  T

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Target: scaffold0415 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 657 - 736
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  657 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 736  T

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Target: scaffold0229 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11347 - 11268
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  11347 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 11268  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35932 - 35853
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  35932 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 35853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 189223 - 189144
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  189223 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 189144  T

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Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 225518 - 225593
Alignment:
Q  6 caacatctcaaatat-caaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||| || || | |||||||  |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  225518 caacatctcaaacattcatatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcat 225593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32506 - 32432
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaa 75  Q
    ||||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | ||||||    
T  32506 gtcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaa 32432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 13932 - 13854
Alignment:
Q  2 tcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaacaacatcaattcat 80  Q
    |||||||||||||||  || ||||||||||| || ||| |||||  || |||||||||||||||| | |||||| ||||    
T  13932 tcatcaacatctcaatcattaaacataattcatgcaatatatatctaattatataacattataaatatcatcaaatcat 13854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12823 - 12758
Alignment:
Q  1 gtcatcaacatctcaaatatcaaacataattcgtgtaatgtatatacaactatataacattataaa 66  Q
    ||||||||||| ||||  |||||||||||||| || ||| |||||  || ||||||||||||||||    
T  12823 gtcatcaacatttcaatcatcaaacataattcatgcaatatatatctaattatataacattataaa 12758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 13811 - 13891
Alignment:
Q  143 tcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgactcacaagggctcgcgaggcgag 222  Q
    |||||||| | ||||||| ||||||||| || |||||||||| ||| |||  ||||| || ||||| ||||||||||||||    
T  13811 tcaactcataacaactcgcgcgacaaagatcgcatttaacctaaaccaggaattctgtcttacaagagctcgcgaggcgag 13891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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