View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4484_high_9 (Length: 252)
Name: NF4484_high_9
Description: NF4484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4484_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22274686 - 22274435
Alignment:
| Q |
1 |
tgagaacagagataaatcatgacaaaatatattgaaaaaataagaaatgaagatgttgtgctagactaattgaaaggtttgatcgtttcaaccaatccaa |
100 |
Q |
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|||||||| ||| ||||||| |||||||| |||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |
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| T |
22274686 |
tgagaacatagacaaatcattacaaaataccttgaaacaacaagaaatgaagatgttgtgctagactgattgaaaggttagatcgtttcaaccaatccaa |
22274587 |
T |
|
| Q |
101 |
tacaaaatcctcagaacttg-ttatttcacaaactct-----aattaatcaaaatctagccactagatttcaatgacgtattttcaatgaatttaaagtc |
194 |
Q |
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||||||||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22274586 |
tacaaaatcttcagaacttggttgtttcacaaactctgcactaattaatcaaaatctagccactagatttcaatgacgtattttcaatgaatttaaagtc |
22274487 |
T |
|
| Q |
195 |
atcttgaaggtgtccaatacatacttatcgtgtccactatacgaacaaaatg |
246 |
Q |
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|||||||| || ||||||||| ||||||||||||||| || ||||||||| |
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| T |
22274486 |
ttcttgaagatgcccaatacatgcttatcgtgtccactgcacaaacaaaatg |
22274435 |
T |
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