View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4485_low_2 (Length: 397)
Name: NF4485_low_2
Description: NF4485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4485_low_2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 7 - 397
Target Start/End: Complemental strand, 12507607 - 12507219
Alignment:
| Q |
7 |
gaagactatgttcttatagcatgtatgtacatacagaacaaaactttagttttatatgagaacagtgtttagtttaattatgccaaagaatatgaaatta |
106 |
Q |
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| T |
12507607 |
gaagactatgttcttatagcatgtatgtacatacagaacaaaactttagttttatatgagaaaagt--ttagtttaattatgccaaagaatatgaaatta |
12507510 |
T |
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| Q |
107 |
atgataaatgaaaatttggctgaaaaatgaactctcttttcaaatcgattttatatgtaaagtcttggatgcaactatgttaatttgagttgctgcaaat |
206 |
Q |
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| T |
12507509 |
atgataaatgaaaatttggctgaaaaatgaactctcatttcaaatcgattttatatgtaaagtcttggatgcaactatgttaatttgagttgctgcaaat |
12507410 |
T |
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| Q |
207 |
tatttagatagatatgccaaagtatatttgtgattgtaattaaacatctttggaatgaaaatatattggcaatactttttacttaaagagcataattaat |
306 |
Q |
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| T |
12507409 |
tatatagatagatatgccaaagtatatttgtgattgtaattaaacatctttggaatgaaaatatattggcaatactttttacttaaagagcataattaat |
12507310 |
T |
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| Q |
307 |
atctttatttatttattttttgcaactatgttattatcatttcactttaggctctttatagcacgtggtgtctttttggatctattgagca |
397 |
Q |
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| T |
12507309 |
atttttatttatttattttttgcaactatgttattatcatttcactttaggctctttatagcacgtggtgtatttttggatctattgagca |
12507219 |
T |
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