View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4486_high_28 (Length: 203)
Name: NF4486_high_28
Description: NF4486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4486_high_28 |
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Alignment Details
Target: chr2 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 2667929 - 2668107
Alignment:
| Q |
20 |
tctatagacattgtgttctttgaacttttcttcatgacccaagtcttgaagacggaa----atccttccttaattaccaaatgaaattgcgtgacgtata |
115 |
Q |
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| T |
2667929 |
tctatagacattgtgttctttgaacttttcttcatgacccaagttctgaagactgaagtctttccttccttaattaccaaatgaaattgcgtaacgtata |
2668028 |
T |
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| Q |
116 |
tggtgctaactgctaagtcaattttcgaccatgttc---tattttttgcgtatgtcttctagaactactagaattatct |
191 |
Q |
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|||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |
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| T |
2668029 |
tggtgctaactgctaagtcaattttcgaccatgttctgtttttttttgcgtatgttttctagaactactagaattatct |
2668107 |
T |
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