View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4486_high_6 (Length: 400)
Name: NF4486_high_6
Description: NF4486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4486_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 12 - 337
Target Start/End: Original strand, 51865222 - 51865547
Alignment:
| Q |
12 |
aaaggcacaagaaacactcgaaataatggacaagcaagggctaggagagaagaagttttttggaggcaatagtattggaatggtggacattacatatgga |
111 |
Q |
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| T |
51865222 |
aaaggcacaagaaacactcgaaataatggacaagcaagggctaggagagaagaagttttttggaggcaataatattggaatggtggacattacatatgga |
51865321 |
T |
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| Q |
112 |
tgccttagtcattggttagaagggttggaggaaattgttgggatgaaattgatcgaggcagacaaatttcctaggttgcatgcatggattctaaatttta |
211 |
Q |
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| T |
51865322 |
tgccttagtcattggttagaagggttggaggaaattgttgggatgaaattgatcgaggcagacaaatttcctaggttgcatgcatggattctaaatttta |
51865421 |
T |
|
| Q |
212 |
aacaagttcctttgattaaacaaaatcttcctgattatgggaaactgttgctccatcttcaatggcgcaagcaagaatatattatataatttcatcaatg |
311 |
Q |
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| T |
51865422 |
aacaagttcctttgattaaacaaaatcttcctgattatgggaaactgttgctccatcttcaatggcgcaagcaagaatatattatataatttcatcaatg |
51865521 |
T |
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| Q |
312 |
tgagaaaagttgtgtgggagattaag |
337 |
Q |
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|||||||||||||||||||||||||| |
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| T |
51865522 |
tgagaaaagttgtgtgggagattaag |
51865547 |
T |
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