View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4486_low_9 (Length: 368)
Name: NF4486_low_9
Description: NF4486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4486_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 32389952 - 32390301
Alignment:
| Q |
1 |
ccagatacacattcaccaccctatataaaccccaaccctcacatttcacttctcattcccatttcatttacattaatcannnnnnng-gaactcgagacc |
99 |
Q |
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| T |
32389952 |
ccagatacacattcaccaccctatataaaccccaaccctcacatttcacttctcattcccatttcatttacattaatcttttttttttgaactcgagacc |
32390051 |
T |
|
| Q |
100 |
tcatagtttgtgtgtttaagatgccgacacgaaccgtaggaacaataaaacaagactgggaacccgtggttctccacaaaaccaaacccaaagcacaaga |
199 |
Q |
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| T |
32390052 |
tcacaatttatatgtttacgatgccgacacgaaccgtaggaacaataaaacaagattgggaacccgtggttctccacaaaaccaaacccaaagcacaaga |
32390151 |
T |
|
| Q |
200 |
cctccgtaacccaaaagcagtaaaccaagccctccgaaccggagcagaagtgttaacagttaaaaaaccaacagccggttcgaacaaaaaagcaacggcc |
299 |
Q |
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| T |
32390152 |
cctccgtaacccaaaagcagtaaaccaagccctccgaaccggagcagaagtgttaacagttaaaaaaccaacagccggttcgaacaaaaaagcaacggcc |
32390251 |
T |
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| Q |
300 |
ggaccggttttaaacgcgaggaaactagatgaagcggctgaaccggcagc |
349 |
Q |
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| T |
32390252 |
ggaccggttttaaacgcgaggaaactagatgaagcggctgaaccggcagc |
32390301 |
T |
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