View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4490_low_5 (Length: 341)

Name: NF4490_low_5
Description: NF4490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4490_low_5
NF4490_low_5
[»] chr3 (62 HSPs)
chr3 (1-338)||(16743991-16744328)
chr3 (20-288)||(13838962-13839232)
chr3 (1-214)||(17912483-17912695)
chr3 (1-288)||(14842487-14842775)
chr3 (48-214)||(2449238-2449404)
chr3 (82-288)||(2049941-2050147)
chr3 (82-288)||(12030073-12030279)
chr3 (152-336)||(19231982-19232169)
chr3 (20-251)||(15858986-15859219)
chr3 (20-224)||(51158008-51158213)
chr3 (1-207)||(15936634-15936841)
chr3 (168-288)||(19260749-19260869)
chr3 (82-214)||(13975722-13975853)
chr3 (82-214)||(45860937-45861068)
chr3 (67-214)||(13954890-13955036)
chr3 (1-207)||(15938476-15938683)
chr3 (253-331)||(15857120-15857198)
chr3 (256-336)||(3992873-3992953)
chr3 (82-202)||(55316351-55316471)
chr3 (256-336)||(55513193-55513273)
chr3 (20-180)||(16821207-16821369)
chr3 (90-289)||(15614973-15615170)
chr3 (256-336)||(2844514-2844594)
chr3 (82-202)||(41270207-41270327)
chr3 (256-336)||(54037976-54038056)
chr3 (256-336)||(17955832-17955916)
chr3 (256-336)||(7854305-7854385)
chr3 (256-317)||(45581954-45582016)
chr3 (144-198)||(14080701-14080756)
chr3 (118-288)||(54651625-54651796)
chr3 (117-207)||(11986173-11986263)
chr3 (272-329)||(17205019-17205076)
chr3 (256-329)||(38810868-38810941)
chr3 (274-329)||(12031849-12031904)
chr3 (89-288)||(12902007-12902209)
chr3 (16-287)||(12264710-12264985)
chr3 (89-287)||(25058876-25059077)
chr3 (256-329)||(13301323-13301396)
chr3 (256-329)||(13311979-13312052)
chr3 (272-329)||(17191879-17191936)
chr3 (89-207)||(49232573-49232693)
chr3 (256-288)||(2449152-2449184)
chr3 (256-288)||(16261777-16261809)
chr3 (256-288)||(16933869-16933901)
chr3 (256-288)||(17912398-17912430)
chr3 (256-288)||(23492696-23492728)
chr3 (256-288)||(38168237-38168269)
chr3 (256-288)||(53771365-53771397)
chr3 (91-207)||(5228452-5228570)
chr3 (117-207)||(15468339-15468429)
chr3 (272-329)||(3576290-3576347)
chr3 (257-322)||(15550922-15550987)
chr3 (118-198)||(4145814-4145894)
chr3 (256-288)||(11986080-11986112)
chr3 (256-288)||(13954804-13954836)
chr3 (256-288)||(14285289-14285321)
chr3 (256-288)||(19947026-19947058)
chr3 (256-288)||(30153265-30153297)
chr3 (256-288)||(33342204-33342236)
chr3 (256-288)||(45861122-45861154)
chr3 (118-197)||(47784767-47784847)
chr3 (256-288)||(51961031-51961063)
[»] chr1 (23 HSPs)
chr1 (82-338)||(41394353-41394609)
chr1 (67-288)||(20931461-20931682)
chr1 (82-288)||(20913161-20913367)
chr1 (48-214)||(51452589-51452755)
chr1 (20-288)||(20445747-20446019)
chr1 (20-288)||(37844374-37844646)
chr1 (20-288)||(20893551-20893821)
chr1 (20-288)||(20531512-20531783)
chr1 (82-289)||(45051554-45051759)
chr1 (82-202)||(2116386-2116506)
chr1 (83-287)||(22227941-22228146)
chr1 (83-287)||(22232638-22232843)
chr1 (256-336)||(21860334-21860414)
chr1 (256-330)||(44034829-44034903)
chr1 (82-202)||(5072388-5072508)
chr1 (82-202)||(18601118-18601238)
chr1 (222-329)||(27675086-27675191)
chr1 (256-336)||(41218728-41218808)
chr1 (272-329)||(13376711-13376768)
chr1 (272-329)||(20177513-20177570)
chr1 (256-287)||(15861327-15861358)
chr1 (157-198)||(22143361-22143402)
chr1 (256-288)||(51452809-51452841)
[»] chr8 (40 HSPs)
chr8 (1-214)||(22907214-22907427)
chr8 (20-288)||(16193643-16193911)
chr8 (82-336)||(16404852-16405107)
chr8 (48-214)||(5238184-5238350)
chr8 (48-214)||(24661248-24661414)
chr8 (48-214)||(43685643-43685809)
chr8 (82-288)||(24928716-24928923)
chr8 (22-288)||(43373392-43373661)
chr8 (82-202)||(6774258-6774378)
chr8 (82-214)||(17345700-17345832)
chr8 (82-198)||(21844576-21844692)
chr8 (82-202)||(24549113-24549233)
chr8 (82-198)||(21851969-21852085)
chr8 (256-336)||(274766-274846)
chr8 (256-336)||(641003-641083)
chr8 (256-336)||(826809-826889)
chr8 (256-336)||(24716714-24716794)
chr8 (82-202)||(30120854-30120974)
chr8 (82-202)||(16674392-16674512)
chr8 (256-336)||(39115598-39115678)
chr8 (67-139)||(222754-222826)
chr8 (67-139)||(736377-736449)
chr8 (67-139)||(860272-860344)
chr8 (89-287)||(22006176-22006377)
chr8 (82-139)||(691909-691966)
chr8 (272-329)||(17285543-17285600)
chr8 (272-329)||(21198005-21198062)
chr8 (118-198)||(26011660-26011741)
chr8 (256-288)||(5238404-5238436)
chr8 (256-288)||(22907128-22907160)
chr8 (256-288)||(24385652-24385684)
chr8 (256-288)||(24661162-24661194)
chr8 (256-288)||(43685863-43685895)
chr8 (91-207)||(16195370-16195488)
chr8 (144-198)||(23226076-23226131)
chr8 (157-198)||(23149985-23150026)
chr8 (256-288)||(2545265-2545297)
chr8 (256-288)||(3431176-3431208)
chr8 (118-197)||(17285370-17285450)
chr8 (256-288)||(22886654-22886686)
[»] chr4 (32 HSPs)
chr4 (1-214)||(26680250-26680463)
chr4 (20-336)||(54118120-54118439)
chr4 (82-288)||(122020-122226)
chr4 (48-214)||(10488659-10488825)
chr4 (48-214)||(16327926-16328092)
chr4 (20-288)||(13246498-13246769)
chr4 (1-288)||(15675009-15675303)
chr4 (16-288)||(10104170-10104449)
chr4 (67-214)||(13048221-13048368)
chr4 (141-288)||(33240890-33241043)
chr4 (1-187)||(31115678-31115865)
chr4 (20-198)||(10644287-10644467)
chr4 (256-336)||(25119059-25119139)
chr4 (67-202)||(47357771-47357906)
chr4 (16-198)||(40885570-40885753)
chr4 (256-336)||(5682380-5682460)
chr4 (182-288)||(31132545-31132657)
chr4 (256-329)||(41165808-41165881)
chr4 (89-287)||(18169107-18169308)
chr4 (272-329)||(47534933-47534990)
chr4 (256-288)||(14952085-14952117)
chr4 (256-288)||(15135907-15135939)
chr4 (256-288)||(15272211-15272243)
chr4 (256-288)||(16327840-16327872)
chr4 (256-288)||(16609013-16609045)
chr4 (256-288)||(26680517-26680549)
chr4 (82-199)||(7850131-7850248)
chr4 (89-203)||(19020623-19020739)
chr4 (256-288)||(8045272-8045304)
chr4 (157-197)||(13809511-13809551)
chr4 (118-197)||(15044994-15045074)
chr4 (256-288)||(16523146-16523178)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-214)||(37066-37279)
scaffold0078 (256-336)||(41632-41712)
scaffold0078 (256-288)||(36980-37012)
[»] chr7 (51 HSPs)
chr7 (1-214)||(7293066-7293279)
chr7 (20-329)||(3060034-3060344)
chr7 (48-214)||(11516324-11516490)
chr7 (48-214)||(15441564-15441730)
chr7 (48-214)||(30262129-30262295)
chr7 (82-288)||(16211897-16212103)
chr7 (20-288)||(13036938-13037209)
chr7 (20-288)||(11580661-11580934)
chr7 (82-288)||(36052795-36053003)
chr7 (20-214)||(47481031-47481226)
chr7 (1-207)||(18253842-18254049)
chr7 (82-214)||(25292338-25292470)
chr7 (1-213)||(13321063-13321278)
chr7 (82-196)||(16478968-16479082)
chr7 (82-198)||(13572808-13572924)
chr7 (82-202)||(10989541-10989661)
chr7 (256-336)||(32493898-32493978)
chr7 (83-203)||(2437590-2437710)
chr7 (90-202)||(13911024-13911136)
chr7 (86-286)||(295893-296094)
chr7 (256-336)||(126738-126818)
chr7 (256-336)||(1936869-1936949)
chr7 (256-336)||(111121-111201)
chr7 (222-329)||(13377819-13377924)
chr7 (257-336)||(7283908-7283987)
chr7 (172-214)||(14113989-14114031)
chr7 (172-214)||(14423639-14423681)
chr7 (272-329)||(13389693-13389750)
chr7 (182-288)||(36024372-36024485)
chr7 (89-288)||(18979938-18980140)
chr7 (89-287)||(15950709-15950910)
chr7 (118-198)||(16914928-16915009)
chr7 (118-207)||(48622665-48622754)
chr7 (256-288)||(2029244-2029276)
chr7 (256-288)||(7293333-7293365)
chr7 (256-288)||(11516544-11516576)
chr7 (256-288)||(14113903-14113935)
chr7 (256-288)||(15441478-15441510)
chr7 (219-288)||(15709428-15709501)
chr7 (273-329)||(16919870-16919926)
chr7 (256-288)||(30262043-30262075)
chr7 (256-288)||(42056188-42056220)
chr7 (118-198)||(9611474-9611555)
chr7 (118-198)||(9839045-9839126)
chr7 (256-288)||(371417-371449)
chr7 (256-288)||(3049905-3049937)
chr7 (256-288)||(13321334-13321366)
chr7 (118-197)||(13377695-13377775)
chr7 (256-284)||(15516765-15516793)
chr7 (256-288)||(25124450-25124482)
chr7 (256-288)||(47480944-47480976)
[»] chr2 (40 HSPs)
chr2 (82-336)||(20627190-20627445)
chr2 (20-336)||(19794581-19794899)
chr2 (20-288)||(462806-463075)
chr2 (1-288)||(36982364-36982655)
chr2 (1-336)||(43642833-43643171)
chr2 (48-214)||(19689401-19689567)
chr2 (48-214)||(23820168-23820334)
chr2 (48-214)||(14906440-14906606)
chr2 (20-288)||(8891310-8891581)
chr2 (48-214)||(20015108-20015274)
chr2 (1-288)||(24341309-24341603)
chr2 (82-214)||(17396653-17396784)
chr2 (82-214)||(25265390-25265522)
chr2 (192-288)||(22863169-22863267)
chr2 (256-336)||(22275045-22275125)
chr2 (256-336)||(22284278-22284358)
chr2 (83-164)||(7507894-7507975)
chr2 (257-336)||(15633538-15633617)
chr2 (82-202)||(19886661-19886781)
chr2 (272-329)||(43646232-43646289)
chr2 (89-288)||(12728529-12728731)
chr2 (89-288)||(34824612-34824814)
chr2 (256-289)||(19689314-19689347)
chr2 (256-288)||(9652796-9652828)
chr2 (256-288)||(14906354-14906386)
chr2 (277-329)||(19660221-19660273)
chr2 (256-288)||(23820388-23820420)
chr2 (256-287)||(25213372-25213403)
chr2 (256-329)||(19666848-19666921)
chr2 (89-203)||(23778048-23778164)
chr2 (118-198)||(24884852-24884933)
chr2 (272-329)||(25305769-25305826)
chr2 (222-329)||(31146032-31146138)
chr2 (118-197)||(68158-68238)
chr2 (256-288)||(7507757-7507789)
chr2 (256-288)||(17396567-17396599)
chr2 (256-288)||(20015328-20015360)
chr2 (256-288)||(28031134-28031166)
chr2 (256-288)||(33128372-33128404)
chr2 (114-197)||(43646055-43646139)
[»] scaffold0266 (2 HSPs)
scaffold0266 (20-288)||(1192-1462)
scaffold0266 (1-288)||(3508-3796)
[»] scaffold0023 (4 HSPs)
scaffold0023 (82-288)||(48729-48935)
scaffold0023 (67-180)||(36210-36323)
scaffold0023 (89-288)||(153924-154126)
scaffold0023 (256-288)||(61122-61154)
[»] scaffold0001 (2 HSPs)
scaffold0001 (20-288)||(171973-172242)
scaffold0001 (20-288)||(177676-177945)
[»] scaffold0106 (1 HSPs)
scaffold0106 (22-288)||(41799-42066)
[»] chr5 (39 HSPs)
chr5 (48-214)||(20623066-20623232)
chr5 (48-214)||(21233528-21233694)
chr5 (20-288)||(23507033-23507302)
chr5 (48-214)||(16536294-16536460)
chr5 (51-214)||(37052844-37053007)
chr5 (20-288)||(27182471-27182742)
chr5 (48-212)||(25900408-25900571)
chr5 (1-288)||(18530988-18531281)
chr5 (1-288)||(22053753-22054047)
chr5 (82-214)||(34939408-34939540)
chr5 (82-202)||(29188284-29188404)
chr5 (84-198)||(27009975-27010089)
chr5 (20-202)||(4199985-4200169)
chr5 (67-202)||(22366481-22366616)
chr5 (82-199)||(43443398-43443515)
chr5 (67-199)||(18777995-18778127)
chr5 (82-202)||(19500031-19500151)
chr5 (82-202)||(25426760-25426880)
chr5 (82-202)||(12506-12626)
chr5 (82-202)||(21073595-21073715)
chr5 (257-331)||(11584374-11584448)
chr5 (117-207)||(32950861-32950951)
chr5 (89-288)||(23514698-23514900)
chr5 (256-329)||(5450695-5450768)
chr5 (89-207)||(10777969-10778089)
chr5 (272-329)||(21222462-21222519)
chr5 (118-198)||(21310709-21310790)
chr5 (118-198)||(29918131-29918212)
chr5 (256-288)||(16105967-16105999)
chr5 (256-288)||(20623286-20623318)
chr5 (256-288)||(21233442-21233474)
chr5 (256-288)||(25900320-25900352)
chr5 (256-288)||(37053061-37053093)
chr5 (89-288)||(1219437-1219639)
chr5 (102-198)||(23981516-23981614)
chr5 (118-198)||(19862375-19862456)
chr5 (256-288)||(108728-108760)
chr5 (256-288)||(9730278-9730310)
chr5 (256-288)||(16536514-16536546)
[»] scaffold0195 (2 HSPs)
scaffold0195 (1-285)||(19255-19543)
scaffold0195 (1-214)||(21339-21553)
[»] scaffold0175 (1 HSPs)
scaffold0175 (67-288)||(882-1103)
[»] scaffold0018 (1 HSPs)
scaffold0018 (82-286)||(51110-51314)
[»] scaffold0141 (4 HSPs)
scaffold0141 (48-214)||(26892-27058)
scaffold0141 (48-207)||(22637-22796)
scaffold0141 (256-288)||(22857-22889)
scaffold0141 (256-288)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (48-214)||(1582-1748)
scaffold0124 (256-288)||(1496-1528)
[»] scaffold0077 (2 HSPs)
scaffold0077 (24-289)||(36836-37104)
scaffold0077 (257-336)||(15319-15398)
[»] scaffold0413 (1 HSPs)
scaffold0413 (82-288)||(5990-6196)
[»] chr6 (37 HSPs)
chr6 (23-288)||(23153518-23153786)
chr6 (83-287)||(14626045-14626249)
chr6 (1-214)||(1657748-1657961)
chr6 (82-214)||(35009439-35009571)
chr6 (82-214)||(15862602-15862734)
chr6 (82-289)||(1650020-1650225)
chr6 (219-288)||(23148266-23148335)
chr6 (256-336)||(19983144-19983224)
chr6 (256-336)||(35015009-35015089)
chr6 (67-202)||(25175680-25175815)
chr6 (67-202)||(27653983-27654118)
chr6 (77-202)||(16825752-16825879)
chr6 (16-214)||(29665937-29666137)
chr6 (256-336)||(18583640-18583720)
chr6 (131-214)||(27751605-27751688)
chr6 (272-329)||(21623506-21623563)
chr6 (89-288)||(1556142-1556344)
chr6 (89-288)||(16232029-16232231)
chr6 (118-198)||(18629608-18629689)
chr6 (272-329)||(22361619-22361676)
chr6 (257-329)||(14152632-14152704)
chr6 (256-288)||(18002395-18002427)
chr6 (256-288)||(23995247-23995279)
chr6 (256-288)||(26090059-26090091)
chr6 (118-198)||(29605616-29605696)
chr6 (256-287)||(4991396-4991427)
chr6 (144-198)||(16887792-16887847)
chr6 (125-196)||(17083200-17083271)
chr6 (144-198)||(35136013-35136068)
chr6 (258-288)||(15742120-15742150)
chr6 (157-198)||(33324898-33324939)
chr6 (256-288)||(1657661-1657693)
chr6 (256-288)||(15862789-15862821)
chr6 (256-288)||(18823283-18823315)
chr6 (256-288)||(18839138-18839170)
chr6 (256-288)||(27751742-27751774)
chr6 (256-288)||(32276659-32276691)
[»] scaffold0302 (1 HSPs)
scaffold0302 (20-288)||(12183-12450)
[»] scaffold0162 (3 HSPs)
scaffold0162 (20-288)||(26340-26610)
scaffold0162 (82-214)||(8180-8312)
scaffold0162 (272-329)||(6877-6934)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-288)||(128095-128382)
scaffold0008 (90-180)||(31697-31787)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-288)||(272093-272362)
[»] scaffold0012 (2 HSPs)
scaffold0012 (20-288)||(247366-247637)
scaffold0012 (16-288)||(34075-34350)
[»] scaffold0498 (1 HSPs)
scaffold0498 (1-288)||(8927-9215)
[»] scaffold0218 (1 HSPs)
scaffold0218 (20-278)||(4996-5256)
[»] scaffold0028 (4 HSPs)
scaffold0028 (82-288)||(89378-89586)
scaffold0028 (163-288)||(107708-107835)
scaffold0028 (144-198)||(79731-79786)
scaffold0028 (256-287)||(130880-130911)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-288)||(123087-123359)
[»] scaffold0025 (3 HSPs)
scaffold0025 (20-288)||(8917-9192)
scaffold0025 (20-240)||(148789-149012)
scaffold0025 (188-288)||(146838-146938)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-207)||(48236-48443)
scaffold0049 (257-336)||(20493-20572)
[»] scaffold0772 (2 HSPs)
scaffold0772 (82-207)||(5660-5785)
scaffold0772 (256-288)||(5846-5878)
[»] scaffold0132 (3 HSPs)
scaffold0132 (67-214)||(13622-13769)
scaffold0132 (256-336)||(42677-42754)
scaffold0132 (256-288)||(13824-13856)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-207)||(107796-108003)
scaffold0026 (82-198)||(64527-64648)
scaffold0026 (157-199)||(89863-89905)
[»] scaffold1542 (1 HSPs)
scaffold1542 (84-214)||(534-664)
[»] scaffold0125 (2 HSPs)
scaffold0125 (83-214)||(41780-41911)
scaffold0125 (248-288)||(41957-41997)
[»] scaffold0075 (1 HSPs)
scaffold0075 (36-214)||(34460-34639)
[»] scaffold0529 (1 HSPs)
scaffold0529 (36-203)||(3047-3215)
[»] scaffold0420 (1 HSPs)
scaffold0420 (82-202)||(13325-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (82-198)||(167-283)
scaffold0116 (256-336)||(30417-30497)
[»] scaffold0215 (2 HSPs)
scaffold0215 (82-180)||(9371-9469)
scaffold0215 (82-180)||(16269-16367)
[»] scaffold0076 (1 HSPs)
scaffold0076 (67-179)||(43114-43226)
[»] scaffold0022 (2 HSPs)
scaffold0022 (83-164)||(5254-5335)
scaffold0022 (157-197)||(102923-102963)
[»] scaffold1711 (1 HSPs)
scaffold1711 (82-202)||(1304-1424)
[»] scaffold0034 (1 HSPs)
scaffold0034 (256-336)||(80187-80267)
[»] scaffold0139 (2 HSPs)
scaffold0139 (82-180)||(14083-14181)
scaffold0139 (85-203)||(21115-21233)
[»] scaffold0016 (3 HSPs)
scaffold0016 (255-336)||(166116-166197)
scaffold0016 (255-330)||(162036-162111)
scaffold0016 (256-329)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (256-336)||(31132-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (256-330)||(5735-5809)
scaffold0686 (256-330)||(5941-6015)
[»] scaffold0369 (1 HSPs)
scaffold0369 (83-164)||(3854-3936)
[»] scaffold0342 (1 HSPs)
scaffold0342 (255-336)||(304-385)
[»] scaffold0361 (1 HSPs)
scaffold0361 (121-214)||(3360-3453)
[»] scaffold1164 (1 HSPs)
scaffold1164 (257-336)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (257-336)||(19802-19881)
scaffold0122 (257-336)||(24106-24185)
[»] scaffold0084 (1 HSPs)
scaffold0084 (89-207)||(56106-56226)
[»] scaffold0467 (1 HSPs)
scaffold0467 (89-288)||(10256-10458)
[»] scaffold0876 (1 HSPs)
scaffold0876 (257-327)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (257-331)||(6261-6335)
scaffold0310 (257-294)||(4-41)
[»] scaffold0066 (3 HSPs)
scaffold0066 (16-164)||(45094-45244)
scaffold0066 (16-164)||(54480-54630)
scaffold0066 (256-288)||(45338-45370)
[»] scaffold0507 (1 HSPs)
scaffold0507 (256-329)||(1363-1436)
[»] scaffold0123 (1 HSPs)
scaffold0123 (118-198)||(8176-8257)
[»] scaffold0013 (1 HSPs)
scaffold0013 (272-329)||(35816-35873)
[»] scaffold0058 (2 HSPs)
scaffold0058 (145-198)||(70307-70361)
scaffold0058 (256-288)||(57392-57424)
[»] scaffold1295 (1 HSPs)
scaffold1295 (272-329)||(442-499)
[»] scaffold0456 (2 HSPs)
scaffold0456 (157-198)||(1546-1587)
scaffold0456 (157-198)||(8691-8732)
[»] scaffold0053 (1 HSPs)
scaffold0053 (272-329)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (256-289)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (256-288)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (256-288)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (256-288)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (256-288)||(13285-13317)
[»] scaffold0032 (4 HSPs)
scaffold0032 (256-288)||(55904-55936)
scaffold0032 (256-288)||(108075-108107)
scaffold0032 (157-198)||(93773-93814)
scaffold0032 (131-198)||(104623-104691)
[»] scaffold0409 (2 HSPs)
scaffold0409 (120-198)||(1348-1427)
scaffold0409 (120-198)||(9603-9682)
[»] scaffold0207 (1 HSPs)
scaffold0207 (245-288)||(18015-18058)
[»] scaffold0389 (1 HSPs)
scaffold0389 (144-197)||(10854-10908)
[»] scaffold0151 (1 HSPs)
scaffold0151 (145-198)||(22422-22476)
[»] scaffold1272 (1 HSPs)
scaffold1272 (272-329)||(632-689)
[»] scaffold0700 (1 HSPs)
scaffold0700 (118-198)||(2691-2772)
[»] scaffold0483 (1 HSPs)
scaffold0483 (272-329)||(6999-7056)
[»] scaffold0138 (1 HSPs)
scaffold0138 (118-198)||(22429-22510)
[»] scaffold0080 (1 HSPs)
scaffold0080 (272-329)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (272-329)||(31357-31414)
[»] scaffold0367 (1 HSPs)
scaffold0367 (256-288)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (256-288)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (256-288)||(4346-4378)
[»] scaffold0243 (1 HSPs)
scaffold0243 (118-197)||(2317-2397)
[»] scaffold0234 (1 HSPs)
scaffold0234 (256-288)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (256-288)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (256-288)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (256-288)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 294; Significance: 1e-165; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 16744328 - 16743991
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttt 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16744328 aacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactataacatgtcaaattcatccattttgcacaattttcataacttt 16744229  T
Q  101 tcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  16744228 tcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaa 16744129  T
Q  201 caacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaac 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  16744128 caacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgttaccttaattatctccaac 16744029  T
Q  301 tactagctctagcttcactttagctcctatgcttctcc 338  Q
    || |||||||||||||||||||||||||||| ||||||    
T  16744028 tattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 13838962 - 13839232
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| |||||| |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  13838962 aacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 13839061  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  13839062 acatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatc 13839161  T
Q  219 aaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  13839162 aaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 17912695 - 17912483
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttt 100  Q
    |||||| |||| || ||| |||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  17912695 aacatcaattaacaacaataacatcgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcacaattttcataacttt 17912596  T
Q  101 tcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17912595 tcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagttggagcacgaatttag 17912497  T
Q  201 caacaatcatccat 214  Q
    ||||||| ||||||    
T  17912496 caacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 14842775 - 14842487
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  ||||||||||||||||||    
T  14842775 aacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcataactt 14842676  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     ||||||||||| |||| |||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  14842675 atcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggagcacgaattta 14842576  T
Q  200 gcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  14842575 gcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 2049941 - 2050147
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| || || |||| ||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||     
T  2049941 gcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcac 2050040  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  2050041 agttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccct 2050140  T
Q  282 tacctta 288  Q
    |||||||    
T  2050141 tacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 82 - 288
Target Start/End: Complemental strand, 12030279 - 12030073
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||| ||||| ||||| ||| |||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  12030279 gcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 12030180  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| || |||||||||    
T  12030179 agttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaaccccct 12030080  T
Q  282 tacctta 288  Q
    |||||||    
T  12030079 tacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 152 - 336
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
Q  152 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 248  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  249 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 251
Target Start/End: Complemental strand, 15859219 - 15858986
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |    
T  15859219 aacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttga 15859120  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||     
T  15859119 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatg 15859020  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaat 251  Q
      ||||||||||||||| ||| |||||||||||||    
T  15859019 caaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 51158213 - 51158008
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| |    
T  51158213 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 51158114  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |    
T  51158113 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagc 51158014  T
Q  219 aaaatt 224  Q
    ||||||    
T  51158013 aaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15936841 - 15936634
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||||| |||||    
T  15936841 aacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaactt 15936742  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     ||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15936741 atcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaattta 15936642  T
Q  200 gcaacaat 207  Q
    | ||||||    
T  15936641 gtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 288
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  168 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 267  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  268 aagactaacccccttacctta 288  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||| || | |||||||||||||| |||||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 13975755  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||| || | |||||||||||||| |||||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 45861035  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 13955036 - 13954890
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||||| |||  ||||||| |||||||||  |||||||||| |||||||||||||||||  ||||||||||||||||| || | |||||||||||||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  167 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  13954936 c-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15938683 - 15938476
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||||| |||||    
T  15938683 aacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaactt 15938584  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     ||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||| | |||||||||||| |||||    
T  15938583 atcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgtattta 15938484  T
Q  200 gcaacaat 207  Q
    | ||||||    
T  15938483 gtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 331
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  253 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 331  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 16821207 - 16821369
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatattta 117  Q
    ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  |||||||||||||||     
T  16821207 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttg 16821306  T
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 180  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  16821307 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 15614973 - 15615170
Alignment:
Q  90 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 189  Q
    |||| ||||| |||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||| || || |||  |||    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagag 15615072  T
Q  190 cacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||||||||||    
T  15615073 cacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccccttacctta 15615169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||  |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  256 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 317  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 14080701 - 14080756
Alignment:
Q  144 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  14080701 caattatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 288
Target Start/End: Original strand, 54651625 - 54651796
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aa 216  Q
    |||||| ||||| ||  |||||||||||||||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| ||    
T  54651625 aacatgcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaa 54651724  T
Q  217 tcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
     | |  ||||||||||||  |||| |  | ||| |||  ||||||||||| ||||| |||||||||||||||    
T  54651725 cccattttcatacaacatgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 11986263 - 11986173
Alignment:
Q  117 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 207  Q
    ||||||||||||| | | |||||||||||||||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  274 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 288
Target Start/End: Complemental strand, 12902209 - 12902007
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  12902209 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaa 12902110  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    ||||||||||||||||| ||| || ||| || | |  ||||||||||||  ||||||  | ||| |||  ||||||||||| |  |||||||||||||||    
T  12902109 gagcacgaatttagcaaaaattattcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttacc 12902010  T
Q  286 tta 288  Q
    |||    
T  12902009 tta 12902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 12264985 - 12264710
Alignment:
Q  16 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa--ttcatccattttgcacaattttcataacttttcatttttacata 113  Q
    ||||||||||||| | ||| |||||| | |||| |||||| ||||||| |||||  |||||| |||  | | ||| | ||||||||  ||||| ||||||    
T  12264985 caacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcatcaattaagtataatct-cataacttaacatttatacata 12264887  T
Q  114 ttt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatc 211  Q
     ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||  |     
T  12264886 ctttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgtt 12264787  T
Q  212 cat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 287  Q
    ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||||    
T  12264786 catcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 12264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 287
Target Start/End: Original strand, 25058876 - 25059077
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  25058876 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 25058975  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  25058976 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtgcatgattatgataataactaacccccttacc 25059075  T
Q  286 tt 287  Q
    ||    
T  25059076 tt 25059077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 49232573 - 49232693
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  49232573 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 49232672  T
Q  187 gagcacgaatttagcaacaat 207  Q
    |||||||||||||||||||||    
T  49232673 gagcacgaatttagcaacaat 49232693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 5228452 - 5228570
Alignment:
Q  91 tcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgga 188  Q
    |||||||||  ||||| |||||||||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |   | ||| ||||| ||   ||    
T  5228452 tcataacttaacatttatacatattttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaggaaataacatcacagcaaga 5228551  T
Q  189 gcacgaatttagcaacaat 207  Q
    |||||||||||||||||||    
T  5228552 gcacgaatttagcaacaat 5228570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 15468429 - 15468339
Alignment:
Q  117 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 207  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||    
T  15468429 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaat 15468339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 322  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 4145894 - 4145814
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||| | ||||||  || ||||||| | ||||||||| || ||||||||||| || | |||||| ||||||||    
T  4145894 aacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatcaccataattggagtacgaattt 4145814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 47784847 - 47784767
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||||||||| | || |||||||||||    
T  47784847 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaatt 47784767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 82 - 338
Target Start/End: Original strand, 41394353 - 41394609
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||     
T  41394353 gcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcat 41394452  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394453 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 41394552  T
Q  282 taccttaattatctccaactactagctctagcttcactttagctcctatgcttctcc 338  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41394553 taccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 67 - 288
Target Start/End: Original strand, 20931461 - 20931682
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| |||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20931461 aaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 20931560  T
Q  167 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgat 266  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| ||||||||||||    
T  20931561 caaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgat 20931660  T
Q  267 aaagactaacccccttacctta 288  Q
    |||| |||||||||||||||||    
T  20931661 aaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 20913161 - 20913367
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  20913161 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20913260  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||||    
T  20913261 agttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaaccccct 20913360  T
Q  282 tacctta 288  Q
    |||||||    
T  20913361 tacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 20445747 - 20446019
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    |||||||||||  ||||||||||| | ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |    
T  20445747 aacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttga 20445846  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||     
T  20445847 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatg 20445946  T
Q  218 -caaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  20445947 caaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 37844646 - 37844374
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttt-tcatttttacatattta 117  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||||  |||  ||||||||||||  | ||| |||||| | | || ||     
T  37844646 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttg 37844547  T
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 217  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattat 37844447  T
Q  218 --caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
       ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37844446 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 20893821 - 20893551
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| ||||||||||||  |||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  20893821 aacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 20893722  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||     
T  20893721 acatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatg 20893622  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  20893621 caaaaattcatacaacatttgaaaa-ttacaaaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 20531512 - 20531783
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    |||||||||||  ||||||||||| | ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |    
T  20531512 aacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttga 20531611  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||     
T  20531612 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatg 20531711  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||    
T  20531712 caaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 289
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  182 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 280  Q
    |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccc 45051750  T
Q  281 ttaccttaa 289  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 2116386 - 2116506
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  2116386 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 2116485  T
Q  182 agttggagcacgaatttagca 202  Q
    |||   ||||||||| |||||    
T  2116486 agtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 22227941 - 22228146
Alignment:
Q  83 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 182  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22228040  T
Q  183 gttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||    
T  22228041 gcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccct 22228140  T
Q  282 tacctt 287  Q
    ||||||    
T  22228141 tacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 22232638 - 22232843
Alignment:
Q  83 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 182  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22232737  T
Q  183 gttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||    
T  22232738 gcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccct 22232837  T
Q  282 tacctt 287  Q
    ||||||    
T  22232838 tacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 222 - 329
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  222 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 321  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  322 agctccta 329  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 41218728 - 41218808
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 287
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  256 atgattatgataaagactaacccccttacctt 287  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 22907427 - 22907214
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907427 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttt 22907328  T
Q  101 tcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907327 tcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 22907228  T
Q  201 caacaatcatccat 214  Q
    ||||||| ||||||    
T  22907227 caacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 16193911 - 16193643
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||| | ||||| | ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| |    
T  16193911 aacatcaattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 16193812  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  16193811 acatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagc 16193712  T
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  16193711 aaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 82 - 336
Target Start/End: Complemental strand, 16405107 - 16404852
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| |||||  ||||| | | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  16405107 gcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 16405008  T
Q  182 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 279  Q
    |||||||||||||||||||||| ||| |||||| ||   |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  16405007 agttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaacccc 16404909  T
Q  280 cttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  16404908 cttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 82 - 288
Target Start/End: Complemental strand, 24928923 - 24928716
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||| | | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  24928923 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcac 24928824  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaaccccc 280  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||     
T  24928823 agttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaacccca 24928724  T
Q  281 ttacctta 288  Q
    ||||||||    
T  24928723 ttacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 22 - 288
Target Start/End: Complemental strand, 43373661 - 43373392
Alignment:
Q  22 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaac 120  Q
    ||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| |||    
T  43373661 catcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaac 43373562  T
Q  121 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--c 218  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||| ||       
T  43373561 atgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattataca 43373462  T
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  43373461 aaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 6774378 - 6774258
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  6774378 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 6774279  T
Q  182 agttggagcacgaatttagca 202  Q
    |||  |||||||||| |||||    
T  6774278 agtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 17345700 - 17345832
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||||||||||||||  |||||||||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||     
T  17345700 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcac 17345799  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||| |||||||||||| |||||||| ||||||    
T  17345800 agttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  182 agttggagcacgaattt 198  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 24549113 - 24549233
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  24549113 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 24549212  T
Q  182 agttggagcacgaatttagca 202  Q
    |||  |||||||||| |||||    
T  24549213 agtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  182 agttggagcacgaattt 198  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 222826 - 222754
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 139  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  222826 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 736449 - 736377
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 139  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  736449 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 860344 - 860272
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 139  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  860344 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 287
Target Start/End: Complemental strand, 22006377 - 22006176
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  22006377 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 22006278  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  22006277 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacc 22006178  T
Q  286 tt 287  Q
    ||    
T  22006177 tt 22006176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 691966 - 691909
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 139  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  691966 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 26011660 - 26011741
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  26011660 aacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 26011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 16195370 - 16195488
Alignment:
Q  91 tcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgga 188  Q
    |||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  |||||| ||||| ||   ||    
T  16195370 tcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaacatagcatcacagcacga 16195469  T
Q  189 gcacgaatttagcaacaat 207  Q
    | |||||||||||||||||    
T  16195470 gaacgaatttagcaacaat 16195488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 23226131 - 23226076
Alignment:
Q  144 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| |||||| |||||    
T  23226131 caattatcatcaatttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 17285370 - 17285450
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    |||||| ||||| ||||||||  || ||||||| | ||| |||||||||  ||||||||||||| | ||||||||||||||    
T  17285370 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataattggagcacgaatt 17285450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 26680250 - 26680463
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26680250 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatctattttgcacaattttcataacttt 26680349  T
Q  101 tcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680350 tcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 26680449  T
Q  201 caacaatcatccat 214  Q
    ||||||| ||||||    
T  26680450 caacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 20 - 336
Target Start/End: Complemental strand, 54118439 - 54118120
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| || |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| |    
T  54118439 aacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttga 54118340  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||     
T  54118339 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatg 54118240  T
Q  219 --aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttc 316  Q
      ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54118239 caaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttc 54118140  T
Q  317 actttagctcctatgcttct 336  Q
    ||||| |||| |||| ||||    
T  54118139 acttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  282 tacctta 288  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 13246498 - 13246769
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  13246498 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 13246597  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||     
T  13246598 acatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatg 13246697  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246698 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 15675303 - 15675009
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  15675303 aacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaactt 15675204  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      |||||||||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15675203 cacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattta 15675104  T
Q  200 gcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  15675103 gcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
Q  16 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatat 114  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||||||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  115 ttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca- 213  Q
    || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
Q  214 -taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 288  Q
     ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 13048368 - 13048221
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||||| |||  ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  167 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 288
Target Start/End: Original strand, 33240890 - 33241043
Alignment:
Q  141 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttga 238  Q
    ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttga 33240989  T
Q  239 aaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 288  Q
    ||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  33240990 aaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 31115678 - 31115865
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||    
T  31115678 aacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaactt 31115777  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgg 187  Q
      |||||||||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  31115778 cacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 10644287 - 10644467
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatattta 117  Q
    ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  |||||||||||||||     
T  10644287 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttg 10644386  T
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  10644387 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 47357771 - 47357906
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  |||||| ||||||||    
T  47357771 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcata 47357870  T
Q  167 caaacatatcatcaaagttggagcacgaatttagca 202  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  47357871 caaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  16 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacata- 113  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  114 tttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||| |||||||||||| |||||||| ||| ||||||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  182 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 275  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  276 cccccttacctta 288  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 287
Target Start/End: Original strand, 18169107 - 18169308
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  18169107 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 18169206  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  18169207 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacc 18169306  T
Q  286 tt 287  Q
    ||    
T  18169307 tt 18169308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 7850131 - 7850248
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||||||||||||||  |||||| ||||| ||  ||||  ||||  ||||||||||| ||| || | |||||| ||| ||| |||||||| ||||      
T  7850131 gcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaatacattcattcaaacataacatctc 7850230  T
Q  182 agttggagcacgaattta 199  Q
      ||||||||||||||||    
T  7850231 cattggagcacgaattta 7850248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 19020623 - 19020739
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  19020623 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 19020722  T
Q  187 gagcacgaatttagcaa 203  Q
    |||||||||||||||||    
T  19020723 gagcacgaatttagcaa 19020739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 15044994 - 15045074
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  15044994 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 15045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 198; Significance: 1e-108; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 37279 - 37066
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37279 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatccaactacaacatgtcaaattcatccattttgcacaattttcataacttt 37180  T
Q  101 tcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 200  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37179 tcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 37080  T
Q  201 caacaatcatccat 214  Q
    ||||||| ||||||    
T  37079 caacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 7293066 - 7293279
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7293066 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttt 7293165  T
Q  101 tcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7293166 tcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 7293265  T
Q  201 caacaatcatccat 214  Q
    ||||||| ||||||    
T  7293266 caacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 20 - 329
Target Start/End: Original strand, 3060034 - 3060344
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccatttt-gcacaattttcataacttttcatttttacatattta 117  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| ||||||  ||| |||||||| || || ||||||||||||||||     
T  3060034 aacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttg 3060132  T
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 217  Q
    |||||||||||| ||||||| |  ||||||||| ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| ||||||||     
T  3060133 aacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataag 3060232  T
Q  218 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttca 317  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  3060233 caaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttca 3060332  T
Q  318 ctttagctccta 329  Q
    |||| |||||||    
T  3060333 cttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 16211897 - 16212103
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||||||||| |||||| ||||| || ||||||| ||||||||| |||||||||||||||||||||||||||||     
T  16211897 gcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 16211996  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16211997 agttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccct 16212096  T
Q  282 tacctta 288  Q
    |||||||    
T  16212097 tacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 13037209 - 13036938
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||| ||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  13037209 aacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 13037110  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||| ||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||     
T  13037109 acatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatg 13037010  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13037009 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 11580934 - 11580661
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  11580934 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 11580835  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||     
T  11580834 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatg 11580735  T
Q  218 --caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 288  Q
       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  11580734 caaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 36052795 - 36053003
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||     
T  36052795 gcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 36052894  T
Q  182 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 279  Q
    |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  36052895 agttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccc 36052994  T
Q  280 cttacctta 288  Q
    |||||||||    
T  36052995 cttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 47481226 - 47481031
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||||||||||||| |    
T  47481226 aacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttga 47481127  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  47481126 acatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 18254049 - 18253842
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  18254049 aacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaactt 18253950  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     ||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  18253949 atcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaattta 18253850  T
Q  200 gcaacaat 207  Q
    | ||||||    
T  18253849 gtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||| ||| || |||||||||||||||||||||||||| ||||||||||||||||| || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    ||||||||||| |||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 13321063 - 13321278
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta-caacatgtcaaa-ttcatccattttgcacaattttcataact 98  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| | |||| |  |||| |||| | |||  ||||||||| |||||||    
T  13321063 aacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattcaccaattgagcacaattt-cataact 13321161  T
Q  99 tttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 196  Q
    |  ||||| |||||| ||  ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||    
T  13321162 tgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaat 13321261  T
Q  197 ttagcaacaatcatcca 213  Q
    ||||||||||| |||||    
T  13321262 ttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 82 - 196
Target Start/End: Complemental strand, 16479082 - 16478968
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||      
T  16479082 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgc 16478983  T
Q  182 agttggagcacgaat 196  Q
    |||  ||||||||||    
T  16478982 agtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  182 agttggagcacgaattt 198  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  83 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 182  Q
    |||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  183 gttggagcacgaatttagcaa 203  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  90 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 189  Q
    |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  190 cacgaatttagca 202  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 286
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  86 aattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 185  Q
    |||||| ||||||| ||||||||||||| || |||||| ||||| |||||||||||||  ||||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  186 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 283  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  284 cct 286  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 329
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  222 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 321  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  322 agctccta 329  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  172 atatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  172 atatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  182 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 275  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  276 -cccccttacctta 288  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 288
Target Start/End: Complemental strand, 18980140 - 18979938
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  18980140 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 18980041  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  18980040 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacc 18979941  T
Q  286 tta 288  Q
    |||    
T  18979940 tta 18979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 287
Target Start/End: Complemental strand, 15950910 - 15950709
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  15950910 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 15950811  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  15950810 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacc 15950711  T
Q  286 tt 287  Q
    ||    
T  15950710 tt 15950709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 16915009 - 16914928
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  16915009 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 48622754 - 48622665
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 207  Q
    |||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| |||  |||||||||||||||| ||||    
T  48622754 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaat 48622665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  219 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  273 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 9611474 - 9611555
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  9611474 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9611555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 9839045 - 9839126
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  9839045 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 13377695 - 13377775
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  13377695 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 13377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  256 atgattatgataaagactaacccccttac 284  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 4e-97; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 82 - 336
Target Start/End: Complemental strand, 20627445 - 20627190
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| || || ||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  20627445 gcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcac 20627346  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattatgataaagactaaccccc 280  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||     
T  20627345 agttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccg 20627246  T
Q  281 ttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  20627245 ttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 336
Target Start/End: Complemental strand, 19794899 - 19794581
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  19794899 aacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 19794800  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| ||     
T  19794799 acatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatg 19794700  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttc 316  Q
      ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19794699 caaaaattcatacaacatttg-aaatttacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttc 19794601  T
Q  317 actttagctcctatgcttct 336  Q
    ||||| |||| |||| ||||    
T  19794600 acttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 462806 - 463075
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||||||||||||| |    
T  462806 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttga 462905  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |    
T  462906 acatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagc 463005  T
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  463006 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 36982655 - 36982364
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| || |||| |||| | |||  |||||||||||| |||||    
T  36982655 aacatcaattaacaacaataacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaactt 36982556  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     |||||||||||||||| |||||||||||| |||| ||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  36982555 atcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacgaattta 36982456  T
Q  200 gcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36982455 gcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 43643171 - 43642833
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| | ||||||||| |||||||||||| ||||| | ||  ||||| | |  ||||||| | |||  |||||||||||| |||||    
T  43643171 aacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaattaataacaactaagaaaaattcaccaattgagcacaattttcacaactt 43643072  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      ||||| | | ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  43643071 aacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaattta 43642972  T
Q  200 gcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctcc 297  Q
    |||||||| |||||  ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  43642971 gcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctccttcccttaattatctcc 43642872  T
Q  298 aactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||| |||||||||||||||||| ||||||||| ||||    
T  43642871 aactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 8891310 - 8891581
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  8891310 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 8891409  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||     
T  8891410 acatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatg 8891509  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8891510 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 24341603 - 24341309
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  24341603 aacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaactt 24341504  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      |||||||||||| || ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  24341503 cacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcatgaattta 24341404  T
Q  200 gcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  24341403 gcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 25265522 - 25265390
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| |||||  |||||||||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  25265522 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaa 25265423  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||| ||||||||||||||||||||| ||||||    
T  25265422 agttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 192 - 288
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  192 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 7507975 - 7507894
Alignment:
Q  83 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 164  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 19886781 - 19886661
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| ||| |||| ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19886781 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19886682  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  19886681 agcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 288
Target Start/End: Original strand, 12728529 - 12728731
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  12728529 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 12728628  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  12728629 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacc 12728728  T
Q  286 tta 288  Q
    |||    
T  12728729 tta 12728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 288
Target Start/End: Original strand, 34824612 - 34824814
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  34824612 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 34824711  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  34824712 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataatcactaacccccttacc 34824811  T
Q  286 tta 288  Q
    |||    
T  34824812 tta 34824814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 289
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaa 289  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  277 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  256 atgattatgataaagactaacccccttacctt 287  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 23778164 - 23778048
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| | | |||| ||||| || || |||||||||||||||  || ||| ||||| ||       
T  23778164 tttcataacttaacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcatcaattcatgcataagaaaatagcatcacagcaa 23778065  T
Q  187 gagcacgaatttagcaa 203  Q
    |||||||||||||||||    
T  23778064 gagcacgaatttagcaa 23778048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 24884852 - 24884933
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| | |||||| |||||| |||||||||||||| |||| |||||| |||||    
T  24884852 aacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatatcatcatagttagagcacaaattt 24884933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 329
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  222 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 320  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  321 tagctccta 329  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 68158 - 68238
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  68158 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 68238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 43646055 - 43646139
Alignment:
Q  114 tttaaacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    |||||||||| ||||| ||||||||  || ||||||| | ||| ||||||||| ||||||||||| || | || |||||||||||    
T  43646055 tttaaacatgaaatttcaccaacaacaatccaattatcaacaacttcatgcattcaaacatatcaacataattagagcacgaatt 43646139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 171; Significance: 9e-92; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 1192 - 1462
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| |    
T  1192 aacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 1291  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||      
T  1292 acatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataaga 1391  T
Q  219 aaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1392 aaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 3796 - 3508
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| || | | |||  |||||||||||| |||||    
T  3796 aacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaatttaccaattgagcacaattttcacaactt 3697  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3696 atcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattta 3597  T
Q  200 gcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3596 gcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 167; Significance: 2e-89; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 48729 - 48935
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||| | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  48729 gcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 48828  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48829 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 48928  T
Q  282 tacctta 288  Q
    |||||||    
T  48929 tacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 36210 - 36323
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  |||||||||| ||||    
T  36210 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacata 36309  T
Q  167 caaacatatcatca 180  Q
    |||||||| |||||    
T  36310 caaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 288
Target Start/End: Complemental strand, 154126 - 153924
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  |||||||||| || ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  154126 tttcataacttaacatttatacatactttgaaacatgtaacttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 154027  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  154026 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacc 153927  T
Q  286 tta 288  Q
    |||    
T  153926 tta 153924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 162; Significance: 2e-86; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 171973 - 172242
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |    
T  171973 aacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttga 172072  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||    
T  172073 acatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatc 172172  T
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172173 aaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 177676 - 177945
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |    
T  177676 aacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttga 177775  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||    
T  177776 acatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatc 177875  T
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177876 aaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 156; Significance: 8e-83; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 22 - 288
Target Start/End: Original strand, 41799 - 42066
Alignment:
Q  22 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaac 120  Q
    ||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||||||||||||| | |    
T  41799 catcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagc 41898  T
Q  121 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaa 220  Q
    ||||||||| |||||||||   |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||    
T  41899 atgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaa 41998  T
Q  221 aattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41999 aattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 23507033 - 23507302
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| |    
T  23507033 aacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 23507132  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| |    
T  23507133 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagc 23507232  T
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||    
T  23507233 aaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  51 tcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattat 150  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  151 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 27182742 - 27182471
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  27182742 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 27182643  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||     
T  27182642 acatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatg 27182543  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27182542 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 48 - 212
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 212  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 18531281 - 18530988
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||   ||||||||||| |||||    
T  18531281 aacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaactt 18531182  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      |||||||||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18531181 cacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattta 18531082  T
Q  200 gcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgat---gattatgataaagactaacccccttacctta 288  Q
    |||||||| |||| || || ||| |||||||| ||||||||||| || ||||||||||||   ||||||||| |||||||||||||||||||||    
T  18531081 gcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 22054047 - 22053753
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  22054047 aacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaactt 22053948  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      |||||||||||| || |||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  22053947 cacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaattta 22053848  T
Q  200 gcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  22053847 gcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 34939408 - 34939540
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||||||||||||||  |||||||||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  34939408 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 34939507  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||| ||||||||||||||||||| | ||||||    
T  34939508 agttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  182 agttggagcacgaatttagca 202  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  84 acaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 183  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  184 ttggagcacgaattt 198  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 4200169 - 4199985
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatattta 117  Q
    ||||||||||| ||| |||||| | ||||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||||| ||||| |     
T  4200169 aacatcaattgaacatgaatcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatg 4200070  T
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 202  Q
    |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
T  4200069 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 22366616 - 22366481
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  22366616 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 22366517  T
Q  167 caaacatatcatcaaagttggagcacgaatttagca 202  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  22366516 caaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  182 agttggagcacgaattta 199  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 18778127 - 18777995
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  18778127 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 18778028  T
Q  167 caaacatatcatcaaagttggagcacgaattta 199  Q
    |||||||| ||||| ||   |||||||||||||    
T  18778027 caaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 25426760 - 25426880
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  25426760 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 25426859  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  25426860 agcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 12506 - 12626
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| ||| |||| ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  12506 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 12605  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  12606 agcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 21073715 - 21073595
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  ||| ||||||||||||||||||| |||||     
T  21073715 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcac 21073616  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  21073615 agcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 331  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 32950861 - 32950951
Alignment:
Q  117 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 207  Q
    ||||||||||||| | | |||||||||||||||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 288
Target Start/End: Original strand, 23514698 - 23514900
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  23514698 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 23514797  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| |||  ||||||||||| |  |||||||||||||||    
T  23514798 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttacc 23514897  T
Q  286 tta 288  Q
    |||    
T  23514898 tta 23514900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 10778089 - 10777969
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  10778089 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 10777990  T
Q  187 gagcacgaatttagcaacaat 207  Q
    |||||||||||||||||||||    
T  10777989 gagcacgaatttagcaacaat 10777969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 21310790 - 21310709
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  21310790 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 29918131 - 29918212
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| |||| || |||||||||||||| | |||||||||||||||    
T  29918131 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 288
Target Start/End: Complemental strand, 1219639 - 1219437
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||| ||||| |  || ||| ||||| ||       
T  1219639 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattaatgcacaagaaaatagcatcacagcaa 1219540  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  1219539 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataatcactaacccccttacc 1219440  T
Q  286 tta 288  Q
    |||    
T  1219439 tta 1219437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 23981614 - 23981516
Alignment:
Q  102 catttttacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||| |||||| ||| |||||| || || ||||||||  || ||||||| | ||||| |||||||||||||||||||||| | || ||||||||||||    
T  23981614 catttatacatactttgaacatgcaaattcaccaacaacaattcaattatcaccaatttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 19862375 - 19862456
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||||||||| | || ||||||||||||    
T  19862375 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaattt 19862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 19255 - 19543
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  19255 aacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaactt 19354  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     |||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19355 atcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattta 19454  T
Q  200 gcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  19455 gcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21339 - 21553
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  21339 aacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaactt 21438  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     |||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21439 atcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattta 21538  T
Q  200 gcaacaatcatccat 214  Q
    |||||||| ||||||    
T  21539 gcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 67 - 288
Target Start/End: Complemental strand, 1103 - 882
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||||| |||  |||||||||||| ||||| | |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  1103 aaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 1004  T
Q  167 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgat 266  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| ||||||||||||    
T  1003 caaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgat 904  T
Q  267 aaagactaacccccttacctta 288  Q
    ||||||||||||||||||||||    
T  903 aaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 82 - 286
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| |||||||||| ||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  282 tacct 286  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 151; Significance: 7e-80; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 151; Significance: 7e-80; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  48 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  148 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 24 - 289
Target Start/End: Complemental strand, 37104 - 36836
Alignment:
Q  24 tcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaacat 122  Q
    ||||||| |||||| ||||| |||||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||||||||||||| |||||    
T  37104 tcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacat 37005  T
Q  123 gtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caa 220  Q
    ||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||   ||    
T  37004 gtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaa 36905  T
Q  221 aattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 289  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  36904 aattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 82 - 288
Target Start/End: Complemental strand, 6196 - 5990
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||| | ||||| | |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  6196 gcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 6097  T
Q  182 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 281  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  ||||||||||||||||||||||||||    
T  6096 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaaccccct 5997  T
Q  282 tacctta 288  Q
    |||||||    
T  5996 tacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 7e-77; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 23 - 288
Target Start/End: Original strand, 23153518 - 23153786
Alignment:
Q  23 atcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaca 121  Q
    |||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| ||||    
T  23153518 atcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaaca 23153617  T
Q  122 tgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--ca 219  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||   |    
T  23153618 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaa 23153717  T
Q  220 aaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23153718 aaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 14626249 - 14626045
Alignment:
Q  83 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 182  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  14626249 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 14626150  T
Q  183 gttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 282  Q
    |   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||| ||||||  ||||||||||||    
T  14626149 gcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaaccccctt 14626050  T
Q  283 acctt 287  Q
    |||||    
T  14626049 acctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 1657961 - 1657748
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattttgcacaattttcataactt 99  Q
    |||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | ||| |  |||| || ||| |||  ||||||||||||||||||    
T  1657961 aacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataacttagcaaaatccatcaattgagcacaattttcataactt 1657863  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      |||||||||||| || ||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||| ||||| |||| |||||||||||||    
T  1657862 cacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagagcacgaattta 1657763  T
Q  200 gcaacaatcatccat 214  Q
    |||||||| ||||||    
T  1657762 gcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 35009571 - 35009439
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| |||||  |||||||||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  35009571 gcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcac 35009472  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||| ||||||||||||||||||||| ||||||    
T  35009471 agttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 15862602 - 15862734
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||||||||||||||  ||||| |||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  15862602 gcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 15862701  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||| |||||||||||||| |||||| ||||||    
T  15862702 agttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 289
Target Start/End: Complemental strand, 1650225 - 1650020
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| ||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  1650225 gcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 1650126  T
Q  182 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 280  Q
    |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  1650125 agtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaaccccc 1650029  T
Q  281 ttaccttaa 289  Q
    |||||||||    
T  1650028 ttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 25175680 - 25175815
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  25175680 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25175779  T
Q  167 caaacatatcatcaaagttggagcacgaatttagca 202  Q
    |||||||| || || ||   ||||||||||||||||    
T  25175780 caaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 27654118 - 27653983
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  27654118 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 27654019  T
Q  167 caaacatatcatcaaagttggagcacgaatttagca 202  Q
    ||| |||| ||||| ||   ||||||||||||||||    
T  27654018 caagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 16825879 - 16825752
Alignment:
Q  77 attttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatca--tacaattattatcaattcatgcatacaaacata 174  Q
    |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |  ||||| ||  |||||||||||||||||||||||    
T  16825879 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacata 16825780  T
Q  175 tcatcaaagttggagcacgaatttagca 202  Q
     ||||| ||   ||||||||||||||||    
T  16825779 acatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
Q  16 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatat 114  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  115 tt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 212  Q
    ||  ||||||||||||| ||| |||||||||||||||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  213 at 214  Q
    ||    
T  29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  131 accaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 288
Target Start/End: Original strand, 1556142 - 1556344
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  1556142 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 1556241  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| |||  ||||||||||| |  |||||||||||||||    
T  1556242 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttacc 1556341  T
Q  286 tta 288  Q
    |||    
T  1556342 tta 1556344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 288
Target Start/End: Original strand, 16232029 - 16232231
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||       
T  16232029 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 16232128  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||    
T  16232129 gagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacc 16232228  T
Q  286 tta 288  Q
    |||    
T  16232229 tta 16232231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 18629689 - 18629608
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  18629689 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 29605616 - 29605696
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||| ||||||||  || ||||||| |  ||||||||||| ||||||||||| || | || ||||||||||||    
T  29605616 aacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaattt 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  256 atgattatgataaagactaacccccttacctt 287  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 16887847 - 16887792
Alignment:
Q  144 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||||| ||||||| ||||||||||||||||| |||| |||| ||||||||||||    
T  16887847 caattatcatcaatttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 17083271 - 17083200
Alignment:
Q  125 aatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 196  Q
    ||||| ||||||||  || ||||||| | |||||||||||| |||||||||||||| | || ||||||||||    
T  17083271 aatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcatcataattagagcacgaat 17083200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 35136068 - 35136013
Alignment:
Q  144 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||||| ||||||| |||||||||||||||||||||  |||| ||||||||||||    
T  35136068 caattatcatcaatttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 288
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  258 gattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 12183 - 12450
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||| | |||||||  || ||||| |  |||| |||| | |||| |||||||||||| ||||| ||||||||||| ||||||    
T  12183 aacatcaattgaacaagaatcaaatctcaatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaa 12280  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  12281 acatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatc 12380  T
Q  219 aaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||| |||||||| |||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  12381 aaaatttcatacagcatttg-aaagttacaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 143; Significance: 4e-75; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 26610 - 26340
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| |||| |  ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||||||||||||| |    
T  26610 aacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttga 26511  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||| ||| ||||| |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||     
T  26510 acatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatg 26411  T
Q  218 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26410 aaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 8312 - 8180
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| |||||  |||||||||||| || ||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||     
T  8312 gcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcac 8213  T
Q  182 agttggagcacgaatttagcaacaatcatccat 214  Q
    |||| ||||||||||||||||||||| ||||||    
T  8212 agttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 141; Significance: 7e-74; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 128382 - 128095
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||||| ||| ||||| |  |||| |||  | |||  |||||||||||| |||||    
T  128382 aacatccattaacatccataacatcaattgaacaagaatcaaatctcaatt-aacaacaacctaacaaaattcgccaattgagcacaattttcacaactt 128284  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      ||  |||||| |||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  128283 aacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaattta 128184  T
Q  200 gcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  128183 gcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  90 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 180  Q
    |||||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 272093 - 272362
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    |||| |||||| |||||||||||| |||||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |    
T  272093 aacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttga 272192  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 218  Q
    |||||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||||| | |||||||| ||| ||||||||| | | ||||||||||    
T  272193 acatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatc 272292  T
Q  219 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  272293 aaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 247637 - 247366
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| || | | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  247637 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttga 247538  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||| ||||| |||  ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||     
T  247537 acatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatg 247438  T
Q  218 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247437 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 34350 - 34075
Alignment:
Q  16 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttttcatttttacatat 114  Q
    ||||||||| ||| | ||| |||||||| |||| |||||| ||||||| || ||||||||| |||  | | || || ||||||||  ||||| ||||||     
T  34350 caacaacattaatggaacatgaatcatatctcatttcaacaacaacatatccaaattcatcaattaagtataactt-cataacttaacatttatacatac 34252  T
Q  115 tt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 212  Q
    ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| | ||| ||   |||||||||||||||||||||  | |    
T  34251 tttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttc 34152  T
Q  213 ataatcaaaattcatacaacattt-gaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    || | |  | ||||||||||| |  ||||||  | ||| |||  ||||||||||| |||||||||||||||||||||    
T  34151 atcaacccatttcatacaacaatgagaaaatgcaaaaattgaacatgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 8927 - 9215
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  8927 aacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaactt 9026  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
      |||||||||||| || |||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||| ||||| |  |||||||||||||||    
T  9027 aacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacgaattta 9126  T
Q  200 gcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  9127 gcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 5256 - 4996
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| |||| |  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| |    
T  5256 aacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 5157  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||| ||| |||||||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||     
T  5156 acatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatg 5057  T
Q  218 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 278  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5056 aaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 130; Significance: 2e-67; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 82 - 288
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||||||||||| ||||| | |||| | | ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  182 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 279  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  280 cttacctta 288  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  163 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 260  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  261 tatgataaagactaacccccttacctta 288  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 79731 - 79786
Alignment:
Q  144 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| | ||||||||||    
T  79731 caattatcatcaatttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  256 atgattatgataaagactaacccccttacctt 287  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 123359 - 123087
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||||| || |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  123359 aacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 123260  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||     
T  123259 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatg 123160  T
Q  218 -caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 288  Q
      ||||||||||||||||||| |||||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  123159 caaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 8917 - 9192
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||  ||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || |    
T  8917 aacatcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattga 9016  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taa 216  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||     
T  9017 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattat 9116  T
Q  217 tcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 288  Q
      ||||| ||||| ||||||||||| || ||||    ||||||||||||||||| ||||||||| | |||||||||    
T  9117 gaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 240
Target Start/End: Original strand, 148789 - 149012
Alignment:
Q  20 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaa 118  Q
    ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| |    
T  148789 aacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 148888  T
Q  119 acatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 217  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || ||     
T  148889 acatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatg 148988  T
Q  218 -caaaattcatacaacatttgaaa 240  Q
      ||||||||||||||||||||||    
T  148989 caaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 288
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  188 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 287  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  288 a 288  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 48236 - 48443
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| |||||    
T  48236 aacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaactt 48335  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     ||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  48336 atcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaattta 48435  T
Q  200 gcaacaat 207  Q
    ||||||||    
T  48436 gcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  182 agttggagcacgaatttagcaacaat 207  Q
    ||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 96; Significance: 5e-47; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 13622 - 13769
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||||| |||  |||||||||||| |||||  |||||||||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  13622 aaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 13721  T
Q  167 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  13722 caaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 92; Significance: 1e-44; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 107796 - 108003
Alignment:
Q  1 aacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataactt 99  Q
    |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||| | |||||    
T  107796 aacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaactt 107895  T
Q  100 ttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
     |||||||| || |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  107896 atcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaattta 107995  T
Q  200 gcaacaat 207  Q
    | ||||||    
T  107996 gtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatc-----aattcatgcatacaaacatatc 176  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  177 atcaaagttggagcacgaattt 198  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 199  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 664 - 534
Alignment:
Q  84 acaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 183  Q
    |||||||||| ||||  |||||| | | ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  664 acaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacag 565  T
Q  184 ttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||||||||||| ||||||    
T  564 ttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 41780 - 41911
Alignment:
Q  83 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 182  Q
    ||||||||||| |||||  |||||||||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  41780 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 41879  T
Q  183 gttggagcacgaatttagcaacaatcatccat 214  Q
    ||| ||||||||||||| ||||||| ||||||    
T  41880 gttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  248 aaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 34639 - 34460
Alignment:
Q  36 gaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaacca 134  Q
    |||||||| ||||||||||| ||||| |  |||| |||| | |||  | |||||||||| |||||   ||||||||| | || |||||||||||| ||||    
T  34639 gaatcatatctcaattcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcacca 34540  T
Q  135 acaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
T  34539 acaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 203
Target Start/End: Original strand, 3047 - 3215
Alignment:
Q  36 gaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaacca 134  Q
    |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || |||||||||||| ||||    
T  3047 gaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcacca 3146  T
Q  135 acaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 203  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||| ||   |||||||||||||||||    
T  3147 acaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  182 agttggagcacgaatttagca 202  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 167 - 283
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  182 agttggagcacgaattt 198  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 9469 - 9371
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 180  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  9469 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 16367 - 16269
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 180  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  16367 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 43114 - 43226
Alignment:
Q  67 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 166  Q
    ||||||| | |||| ||||||| ||||||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  43114 aaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 43213  T
Q  167 caaacatatcatc 179  Q
     ||||||| ||||    
T  43214 gaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  83 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 164  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 181  Q
    ||||||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  182 agttggagcacgaatttagca 202  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  82 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 180  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||||| || |||||||||| |||||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 85 - 203
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  85 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 184  Q
    |||| |||||||||| |||||||||||||||| |||||||||||| || |||||||||| |||||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  185 tggagcacgaatttagcaa 203  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  255 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  255 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 330  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 330  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 330  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  83 cacaattttcataacttttcatttt-tacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 164  Q
    |||||||| |||||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  255 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 3360 - 3453
Alignment:
Q  121 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 214  Q
    ||||||||| |||||||||||||||| ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 336  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| | | |||||||||||||||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  187 gagcacgaatttagcaacaat 207  Q
    ||||||||||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 288
Target Start/End: Complemental strand, 10458 - 10256
Alignment:
Q  89 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttg 186  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| ||       
T  10458 tttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaa 10359  T
Q  187 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 285  Q
    ||||||||||||||||||||| || ||| || | |  ||||||||||||  ||||||  | ||| |||  ||||||||||  ||||| ||||||||||||    
T  10358 gagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttacc 10259  T
Q  286 tta 288  Q
    |||    
T  10258 tta 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 94 - 164
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 327  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 331
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 331  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  257 tgattatgataaagactaacccccttaccttaattatc 294  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 45094 - 45244
Alignment:
Q  16 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatat 114  Q
    ||||||||||||| | ||| |||||| | |||| |||||| ||||||| ||||| |||| | |||  | ||||||| || |||||  ||||| ||||||     
T  45094 caacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaattt-caaaacttgacatttatacatac 45192  T
Q  115 tt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 164  Q
    ||  ||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  45193 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatgca 45244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 54480 - 54630
Alignment:
Q  16 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatat 114  Q
    ||||||||||||| | ||| |||||| | |||| |||||| ||||||| ||||| |||| | |||  | ||||||| ||||||||  ||||| ||||||     
T  54480 caacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaattt-cataacttgacatttatacatac 54578  T
Q  115 tt--aaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 164  Q
    ||  ||||||| ||||| ||| |||||||||||||||| |||||||||||||    
T  54579 tttgaaacatgcaatttcacccacaatcatacaattatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 8176 - 8257
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| || || ||||||||  || ||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  8176 aacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 70361 - 70307
Alignment:
Q  145 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  70361 aattatcatcaatttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 442 - 499
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 289
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  256 atgattatgataaagactaacccccttaccttaa 289  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  157 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 104691 - 104623
Alignment:
Q  131 accaacaatcatacaattattatcaattca-tgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    ||||||||  || ||||||| ||||||| | |||||||||||||||||||| |||| ||||| ||||||    
T  104691 accaacaacaattcaattatcatcaatttaatgcatacaaacatatcatcatagttagagcatgaattt 104623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 1427 - 1348
Alignment:
Q  120 catgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| |||| ||||||||||||    
T  1427 catgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 9682 - 9603
Alignment:
Q  120 catgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| |||| ||||||||||||    
T  9682 catgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  245 acaaaatgatgatgattatgataaagactaacccccttacctta 288  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 10854 - 10908
Alignment:
Q  144 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    ||||||| ||||||| |||||||||||||||||||||| || | |||||||||||    
T  10854 caattatcatcaatttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 22476 - 22422
Alignment:
Q  145 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||||| |||||||||||||||||||||| | || ||||||||||||    
T  22476 aattatcatcaatttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 632 - 689
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 2691 - 2772
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  2691 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatcatcataattagagcacgaattt 2772  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 22510 - 22429
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 198  Q
    |||||| || || ||||||||  || ||||||| ||||||| ||||||||||||||||| |||  |||| ||||||||||||    
T  22510 aacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatattatcctagttagagcacgaattt 22429  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  272 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 329  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 2397 - 2317
Alignment:
Q  118 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 197  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  2397 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 2317  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  256 atgattatgataaagactaacccccttacctta 288  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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