View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4492-Insertion-1 (Length: 990)

Name: NF4492-Insertion-1
Description: NF4492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4492-Insertion-1
NF4492-Insertion-1
[»] chr5 (59 HSPs)
chr5 (623-799)||(37433834-37434010)
chr5 (198-436)||(31986722-31986961)
chr5 (8-131)||(37704336-37704459)
chr5 (259-449)||(28857844-28858035)
chr5 (217-382)||(36949148-36949313)
chr5 (8-88)||(37437445-37437525)
chr5 (8-78)||(37698571-37698641)
chr5 (265-380)||(21323894-21324009)
chr5 (265-380)||(31731595-31731710)
chr5 (330-429)||(13582684-13582782)
chr5 (330-449)||(24771351-24771469)
chr5 (314-451)||(36428689-36428828)
chr5 (330-429)||(41858596-41858694)
chr5 (330-436)||(7805067-7805172)
chr5 (330-436)||(14374131-14374236)
chr5 (265-441)||(36942193-36942370)
chr5 (334-443)||(1414049-1414157)
chr5 (330-443)||(36253815-36253927)
chr5 (265-435)||(36937439-36937610)
chr5 (335-441)||(556685-556791)
chr5 (335-441)||(561457-561563)
chr5 (330-443)||(17504942-17505054)
chr5 (805-881)||(37434121-37434198)
chr5 (330-442)||(17510048-17510159)
chr5 (284-441)||(29167919-29168078)
chr5 (330-429)||(24435863-24435961)
chr5 (335-441)||(26667262-26667368)
chr5 (335-441)||(26938859-26938965)
chr5 (265-435)||(13301410-13301584)
chr5 (330-443)||(42019562-42019674)
chr5 (330-449)||(24776806-24776927)
chr5 (335-434)||(32461548-32461647)
chr5 (335-441)||(6514600-6514706)
chr5 (335-441)||(10759819-10759924)
chr5 (335-441)||(12103015-12103121)
chr5 (335-441)||(36423627-36423733)
chr5 (335-441)||(37248794-37248900)
chr5 (216-272)||(15395399-15395456)
chr5 (335-435)||(37652829-37652929)
chr5 (330-429)||(41853551-41853649)
chr5 (366-448)||(1430013-1430095)
chr5 (335-441)||(7451748-7451854)
chr5 (330-443)||(26709091-26709205)
chr5 (330-443)||(26978825-26978939)
chr5 (335-441)||(39518400-39518506)
chr5 (335-441)||(39523039-39523145)
chr5 (335-441)||(42001424-42001530)
chr5 (284-441)||(12501845-12502004)
chr5 (198-272)||(9079255-9079328)
chr5 (335-441)||(12045138-12045244)
chr5 (335-441)||(41996655-41996761)
chr5 (335-380)||(35679874-35679919)
chr5 (824-881)||(37438653-37438710)
chr5 (338-435)||(40147891-40147988)
chr5 (87-131)||(37698461-37698505)
chr5 (335-441)||(3665922-3666028)
chr5 (335-413)||(41587159-41587237)
chr5 (93-130)||(37441613-37441650)
chr5 (335-380)||(37550031-37550076)
[»] chr3 (61 HSPs)
chr3 (203-407)||(795267-795476)
chr3 (208-449)||(1688757-1688999)
chr3 (198-449)||(27605008-27605248)
chr3 (206-405)||(1740970-1741178)
chr3 (259-452)||(2617177-2617372)
chr3 (225-405)||(25023807-25023993)
chr3 (267-392)||(26706823-26706951)
chr3 (284-442)||(21494251-21494408)
chr3 (265-436)||(10586111-10586282)
chr3 (278-449)||(23074352-23074522)
chr3 (265-441)||(3672574-3672751)
chr3 (265-441)||(3692606-3692783)
chr3 (336-442)||(53119517-53119622)
chr3 (336-436)||(20810368-20810467)
chr3 (272-383)||(1689896-1690007)
chr3 (282-449)||(23071488-23071654)
chr3 (330-436)||(13022023-13022128)
chr3 (336-442)||(33089343-33089448)
chr3 (314-429)||(55128793-55128909)
chr3 (330-443)||(17368708-17368820)
chr3 (330-442)||(3476940-3477051)
chr3 (335-441)||(758367-758473)
chr3 (330-443)||(17364052-17364166)
chr3 (335-441)||(23666122-23666228)
chr3 (335-441)||(24038370-24038476)
chr3 (336-442)||(26962049-26962154)
chr3 (330-443)||(15768185-15768297)
chr3 (330-443)||(20090656-20090768)
chr3 (330-443)||(20095781-20095893)
chr3 (330-443)||(34129163-34129275)
chr3 (330-447)||(38436985-38437101)
chr3 (335-440)||(39775727-39775832)
chr3 (330-429)||(17357839-17357939)
chr3 (330-449)||(4117594-4117712)
chr3 (335-418)||(12965872-12965955)
chr3 (273-380)||(31002748-31002854)
chr3 (336-443)||(54270633-54270739)
chr3 (335-441)||(3033632-3033738)
chr3 (335-441)||(3418983-3419089)
chr3 (335-441)||(14438694-14438800)
chr3 (335-441)||(18467213-18467319)
chr3 (335-441)||(20520042-20520148)
chr3 (335-441)||(49971423-49971529)
chr3 (330-443)||(15763024-15763136)
chr3 (335-435)||(55431309-55431409)
chr3 (330-381)||(3482417-3482468)
chr3 (335-441)||(7571217-7571323)
chr3 (268-418)||(7806485-7806633)
chr3 (314-380)||(18472056-18472124)
chr3 (335-406)||(27708959-27709030)
chr3 (335-441)||(8069668-8069773)
chr3 (335-429)||(8883170-8883264)
chr3 (335-380)||(23661463-23661508)
chr3 (359-456)||(53358218-53358314)
chr3 (364-428)||(13474707-13474771)
chr3 (95-131)||(14554724-14554760)
chr3 (335-441)||(29350228-29350334)
chr3 (284-380)||(32474626-32474724)
chr3 (330-436)||(45904443-45904548)
chr3 (330-380)||(45904899-45904948)
chr3 (330-411)||(30341838-30341918)
[»] chr6 (34 HSPs)
chr6 (206-449)||(10642692-10642940)
chr6 (206-435)||(5600839-5601071)
chr6 (246-413)||(22713713-22713880)
chr6 (284-442)||(29325525-29325682)
chr6 (338-442)||(3901902-3902006)
chr6 (336-435)||(12183000-12183099)
chr6 (330-442)||(19478138-19478249)
chr6 (330-443)||(22703360-22703472)
chr6 (330-443)||(29491231-29491343)
chr6 (325-413)||(5740779-5740867)
chr6 (331-442)||(13605087-13605197)
chr6 (335-441)||(11614091-11614197)
chr6 (330-448)||(24192474-24192591)
chr6 (330-443)||(21396688-21396800)
chr6 (330-443)||(22698237-22698349)
chr6 (330-429)||(34142083-34142181)
chr6 (330-429)||(34154699-34154797)
chr6 (330-429)||(34375922-34376020)
chr6 (330-448)||(24191377-24191494)
chr6 (336-442)||(31981550-31981655)
chr6 (336-428)||(2818147-2818238)
chr6 (326-449)||(11956691-11956814)
chr6 (331-442)||(17281558-17281669)
chr6 (335-441)||(6407859-6407965)
chr6 (335-441)||(11570748-11570854)
chr6 (335-413)||(12688989-12689067)
chr6 (335-413)||(21309049-21309127)
chr6 (342-443)||(21401744-21401844)
chr6 (336-440)||(6112973-6113076)
chr6 (335-411)||(17964558-17964634)
chr6 (356-411)||(13660050-13660105)
chr6 (335-434)||(24589163-24589262)
chr6 (335-441)||(8747772-8747878)
chr6 (335-411)||(16836155-16836231)
[»] chr4 (57 HSPs)
chr4 (246-449)||(34644540-34644743)
chr4 (198-448)||(17359520-17359766)
chr4 (210-383)||(3258162-3258335)
chr4 (198-324)||(19724948-19725074)
chr4 (284-429)||(8082975-8083120)
chr4 (331-441)||(24490022-24490132)
chr4 (274-380)||(3997995-3998100)
chr4 (278-392)||(17682451-17682565)
chr4 (338-435)||(10120811-10120907)
chr4 (205-411)||(29236267-29236463)
chr4 (286-394)||(30255530-30255638)
chr4 (357-449)||(39319614-39319706)
chr4 (330-429)||(653046-653144)
chr4 (334-449)||(10318777-10318892)
chr4 (271-411)||(31298323-31298459)
chr4 (336-442)||(47046307-47046412)
chr4 (330-443)||(8980279-8980391)
chr4 (330-443)||(8985399-8985511)
chr4 (330-443)||(13700499-13700611)
chr4 (330-443)||(21299827-21299939)
chr4 (330-443)||(51019367-51019479)
chr4 (330-443)||(54991475-54991587)
chr4 (265-380)||(41816836-41816951)
chr4 (330-449)||(13710652-13710769)
chr4 (22-88)||(16841203-16841272)
chr4 (336-443)||(41393234-41393340)
chr4 (336-449)||(13695142-13695254)
chr4 (330-443)||(21304947-21305059)
chr4 (221-418)||(30564297-30564496)
chr4 (330-443)||(36359283-36359395)
chr4 (330-443)||(39999058-39999170)
chr4 (330-443)||(40004016-40004128)
chr4 (330-443)||(53797618-53797730)
chr4 (330-443)||(54343192-54343304)
chr4 (330-443)||(54348346-54348458)
chr4 (265-380)||(7903034-7903149)
chr4 (330-429)||(36354179-36354277)
chr4 (335-441)||(5271418-5271524)
chr4 (335-441)||(13521991-13522097)
chr4 (335-441)||(31269024-31269130)
chr4 (335-441)||(31273511-31273617)
chr4 (335-441)||(37259876-37259982)
chr4 (335-441)||(37264563-37264669)
chr4 (335-441)||(51697907-51698013)
chr4 (265-381)||(29085747-29085864)
chr4 (335-441)||(8030475-8030581)
chr4 (335-429)||(31729386-31729480)
chr4 (335-413)||(31765904-31765982)
chr4 (335-441)||(33468972-33469078)
chr4 (314-435)||(5928195-5928318)
chr4 (284-441)||(8693701-8693860)
chr4 (330-380)||(9764015-9764065)
chr4 (335-441)||(16421019-16421125)
chr4 (335-441)||(33463355-33463461)
chr4 (335-435)||(47574621-47574721)
chr4 (335-441)||(12878229-12878335)
chr4 (359-449)||(31099260-31099352)
[»] scaffold0027 (1 HSPs)
scaffold0027 (198-392)||(43143-43338)
[»] chr2 (40 HSPs)
chr2 (198-449)||(11658746-11659001)
chr2 (217-409)||(28945191-28945388)
chr2 (206-448)||(39542386-39542617)
chr2 (206-429)||(39542904-39543116)
chr2 (206-355)||(27556640-27556794)
chr2 (265-436)||(19538381-19538552)
chr2 (278-456)||(160016-160194)
chr2 (272-411)||(28855025-28855164)
chr2 (273-436)||(6297823-6297985)
chr2 (331-436)||(42914638-42914742)
chr2 (284-441)||(30650919-30651078)
chr2 (336-418)||(5089292-5089373)
chr2 (335-441)||(10160723-10160829)
chr2 (335-441)||(25497324-25497430)
chr2 (335-441)||(31326729-31326835)
chr2 (330-443)||(42723445-42723557)
chr2 (330-443)||(42728614-42728726)
chr2 (330-443)||(44096291-44096403)
chr2 (330-443)||(44754590-44754702)
chr2 (330-443)||(44759756-44759868)
chr2 (271-441)||(9180658-9180829)
chr2 (338-441)||(29677371-29677474)
chr2 (335-434)||(30658260-30658359)
chr2 (335-441)||(1934992-1935098)
chr2 (335-441)||(7737850-7737956)
chr2 (335-441)||(25478296-25478402)
chr2 (330-443)||(40518466-40518578)
chr2 (271-441)||(9189737-9189908)
chr2 (331-411)||(40392340-40392419)
chr2 (326-385)||(17327453-17327512)
chr2 (284-429)||(18344433-18344580)
chr2 (330-443)||(28751723-28751835)
chr2 (335-441)||(42926758-42926866)
chr2 (202-258)||(22844898-22844954)
chr2 (217-261)||(44683278-44683322)
chr2 (206-285)||(5771076-5771158)
chr2 (198-251)||(30636994-30637047)
chr2 (335-435)||(12796921-12797021)
chr2 (335-435)||(19578413-19578513)
chr2 (335-428)||(35638996-35639089)
[»] chr7 (42 HSPs)
chr7 (206-449)||(7874963-7875210)
chr7 (271-435)||(19640295-19640458)
chr7 (265-436)||(27256238-27256409)
chr7 (267-413)||(24169968-24170114)
chr7 (336-436)||(24528350-24528449)
chr7 (330-442)||(9973452-9973563)
chr7 (330-443)||(16539406-16539518)
chr7 (330-443)||(16626144-16626256)
chr7 (330-443)||(42571934-42572046)
chr7 (335-441)||(4579498-4579604)
chr7 (336-442)||(43892848-43892953)
chr7 (330-443)||(33237991-33238103)
chr7 (330-443)||(47998964-47999076)
chr7 (304-441)||(26341189-26341328)
chr7 (335-441)||(9650966-9651072)
chr7 (330-443)||(21081033-21081147)
chr7 (336-442)||(47177119-47177224)
chr7 (330-411)||(2234624-2234704)
chr7 (330-411)||(19309605-19309685)
chr7 (211-333)||(19687140-19687252)
chr7 (265-381)||(20932642-20932759)
chr7 (330-443)||(32212648-32212760)
chr7 (336-429)||(33226417-33226509)
chr7 (330-443)||(33243168-33243280)
chr7 (330-443)||(47993789-47993901)
chr7 (265-380)||(40865281-40865396)
chr7 (330-429)||(12934400-12934498)
chr7 (330-409)||(17495426-17495504)
chr7 (330-409)||(17557710-17557788)
chr7 (335-434)||(23866065-23866164)
chr7 (339-442)||(28292506-28292607)
chr7 (335-441)||(8076040-8076146)
chr7 (335-429)||(23246932-23247026)
chr7 (335-441)||(4930223-4930329)
chr7 (335-441)||(13314235-13314341)
chr7 (335-441)||(44423136-44423242)
chr7 (335-413)||(44510676-44510754)
chr7 (338-441)||(3357634-3357737)
chr7 (300-429)||(8268295-8268426)
chr7 (335-441)||(27238232-27238338)
chr7 (335-380)||(6590982-6591027)
chr7 (336-433)||(15642232-15642329)
[»] chr1 (41 HSPs)
chr1 (198-447)||(14724232-14724487)
chr1 (198-383)||(25188135-25188319)
chr1 (265-392)||(33055078-33055205)
chr1 (265-436)||(8267758-8267930)
chr1 (330-436)||(10106099-10106204)
chr1 (265-436)||(41097880-41098051)
chr1 (330-436)||(13890809-13890914)
chr1 (209-322)||(13893737-13893850)
chr1 (329-436)||(26651159-26651265)
chr1 (336-436)||(38734271-38734370)
chr1 (263-443)||(11251040-11251219)
chr1 (265-442)||(4632855-4633032)
chr1 (330-443)||(37404410-37404522)
chr1 (331-443)||(34318219-34318330)
chr1 (273-396)||(33054347-33054471)
chr1 (330-436)||(39747159-39747264)
chr1 (330-443)||(36684709-36684821)
chr1 (330-443)||(37409531-37409643)
chr1 (336-436)||(14582095-14582194)
chr1 (330-410)||(48246677-48246756)
chr1 (336-442)||(5602425-5602530)
chr1 (335-441)||(19799012-19799118)
chr1 (335-441)||(40165970-40166076)
chr1 (330-443)||(3584590-3584702)
chr1 (336-429)||(5724982-5725074)
chr1 (330-443)||(27716432-27716544)
chr1 (335-428)||(33301179-33301272)
chr1 (314-441)||(23192794-23192922)
chr1 (335-443)||(47451224-47451332)
chr1 (335-441)||(10135446-10135552)
chr1 (336-443)||(5730094-5730200)
chr1 (338-442)||(19422876-19422983)
chr1 (335-441)||(10140079-10140185)
chr1 (284-380)||(51041409-51041507)
chr1 (347-411)||(27711325-27711388)
chr1 (358-441)||(3094104-3094187)
chr1 (335-434)||(16649612-16649710)
chr1 (347-409)||(11387841-11387902)
chr1 (335-441)||(12259986-12260092)
chr1 (335-441)||(18784548-18784653)
chr1 (335-441)||(26927721-26927827)
[»] chr8 (35 HSPs)
chr8 (199-368)||(15150311-15150485)
chr8 (265-440)||(34818627-34818802)
chr8 (265-440)||(37771703-37771878)
chr8 (330-442)||(19430004-19430115)
chr8 (330-442)||(19435506-19435617)
chr8 (330-442)||(19566153-19566264)
chr8 (330-442)||(19571655-19571766)
chr8 (330-429)||(33616721-33616819)
chr8 (330-436)||(31030524-31030629)
chr8 (330-443)||(43999224-43999336)
chr8 (284-441)||(40125831-40125990)
chr8 (330-428)||(21644075-21644172)
chr8 (330-411)||(42514368-42514448)
chr8 (335-441)||(19166624-19166730)
chr8 (335-441)||(31449865-31449971)
chr8 (335-441)||(44925922-44926028)
chr8 (336-428)||(13584354-13584453)
chr8 (330-443)||(17955783-17955895)
chr8 (338-411)||(24884733-24884805)
chr8 (330-443)||(32015689-32015801)
chr8 (335-435)||(38182236-38182336)
chr8 (338-441)||(1807462-1807565)
chr8 (326-449)||(33848002-33848124)
chr8 (335-441)||(33416537-33416643)
chr8 (335-441)||(34118456-34118562)
chr8 (335-380)||(43302717-43302762)
chr8 (335-418)||(15875667-15875750)
chr8 (265-347)||(25367908-25367991)
chr8 (335-441)||(17025925-17026031)
chr8 (335-441)||(17556417-17556523)
chr8 (335-441)||(18876366-18876471)
chr8 (336-396)||(25367993-25368052)
chr8 (335-418)||(36683592-36683675)
chr8 (335-429)||(1910968-1911062)
chr8 (335-441)||(24090617-24090723)
[»] scaffold0020 (1 HSPs)
scaffold0020 (265-440)||(1154-1329)
[»] scaffold0060 (3 HSPs)
scaffold0060 (265-429)||(52828-52992)
scaffold0060 (265-392)||(47785-47912)
scaffold0060 (330-443)||(36999-37111)
[»] scaffold0061 (1 HSPs)
scaffold0061 (271-380)||(45836-45944)
[»] scaffold0017 (1 HSPs)
scaffold0017 (271-380)||(152843-152951)
[»] scaffold0132 (2 HSPs)
scaffold0132 (330-442)||(2766-2877)
scaffold0132 (330-442)||(10726-10837)
[»] scaffold0011 (2 HSPs)
scaffold0011 (336-436)||(7042-7141)
scaffold0011 (330-429)||(1568-1666)
[»] scaffold0067 (1 HSPs)
scaffold0067 (231-436)||(33861-34068)
[»] scaffold0182 (1 HSPs)
scaffold0182 (314-441)||(9863-9992)
[»] scaffold0014 (2 HSPs)
scaffold0014 (330-443)||(31534-31646)
scaffold0014 (331-443)||(26362-26473)
[»] scaffold0166 (2 HSPs)
scaffold0166 (330-442)||(13734-13845)
scaffold0166 (330-449)||(19189-19310)
[»] scaffold0002 (1 HSPs)
scaffold0002 (284-441)||(4064-4223)
[»] scaffold0352 (1 HSPs)
scaffold0352 (335-441)||(7094-7200)
[»] scaffold0594 (1 HSPs)
scaffold0594 (330-443)||(9202-9314)
[»] scaffold0517 (1 HSPs)
scaffold0517 (330-443)||(3552-3664)
[»] scaffold0055 (1 HSPs)
scaffold0055 (330-443)||(3047-3159)
[»] scaffold0052 (1 HSPs)
scaffold0052 (330-443)||(81376-81488)
[»] scaffold0045 (1 HSPs)
scaffold0045 (335-441)||(83056-83162)
[»] scaffold0057 (1 HSPs)
scaffold0057 (335-413)||(35652-35730)
[»] scaffold0009 (2 HSPs)
scaffold0009 (198-251)||(70466-70519)
scaffold0009 (198-251)||(71626-71679)
[»] scaffold0012 (1 HSPs)
scaffold0012 (335-440)||(166085-166190)


Alignment Details
Target: chr5 (Bit Score: 125; Significance: 7e-64; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 623 - 799
Target Start/End: Original strand, 37433834 - 37434010
Alignment:
Q  623 ttaaataccaagtttttgtggttaattttctttcacatgtgctcagatagtatgataaagtatttgagacaagattcttaacatgtagttggttggtaga 722  Q
    |||||||| | ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37433834 ttaaatactatgttttggtagttaattttctttcacatgtgcttagatagtatgataaagtatttgagacaagatttttaacatgtagttggttggtaga 37433933  T
Q  723 gctgatgcttcctaatgtgaatgaggacatccttgattaaatctcacttcaaatagtcctaggttttagcacatttt 799  Q
    ||||||||||| |||||||||| ||  ||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  37433934 gctgatgcttcttaatgtgaattagagcatccttaattaaatctcacttcaaatagacctaggttttggcacatttt 37434010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 198 - 436
Target Start/End: Complemental strand, 31986961 - 31986722
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatatt-gagggtgttatttctcgaacgatt 296  Q
    |||||| |||||||||| |||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||  |||| ||||||||||||| |||||    
T  31986961 actcctcatgtcccttccgttttgagtggtcttggtaccatatagagtggtttaatcgaatgattaaaccatatcagaggatgttatttctcgatcgatt 31986862  T
Q  297 acttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgt 396  Q
    |||||||||| ||||| ||||||||||  |||||| ||||||||||||||| |||||||||  |||||| ||||||||||| ||||| |||||||||||     
T  31986861 acttacggtgcagtacgtaatcgaacaagtgaactaggttgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgc 31986762  T
Q  397 aaaacgtcttaaagagaacgacttgatcgtgacacaaccc 436  Q
     |||||||||||||| | |||| | |||||||| ||||||    
T  31986761 gaaacgtcttaaagaaagcgaccttatcgtgactcaaccc 31986722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 37704459 - 37704336
Alignment:
Q  8 tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatcctaaatcatcaaaatgcggtccttttttattc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37704459 tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatcctaaatcatcaaaatgcggtccttttttattc 37704360  T
Q  108 tattgccttattttacttttcact 131  Q
    ||||||||||||||||||||||||    
T  37704359 tattgccttattttacttttcact 37704336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 259 - 449
Target Start/End: Complemental strand, 28858035 - 28857844
Alignment:
Q  259 gattaaaccatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcg 358  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | || ||| | |||||||| |||| |||| ||||||||||||||| |||||||| |    
T  28858035 gattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgtg 28857936  T
Q  359 gttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtctt-aaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    |||||| ||||||||||||||||||  ||||||| ||  ||||||||| ||||| | ||||||| ||||||| |||||| ||||||||||||    
T  28857935 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 28857844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 217 - 382
Target Start/End: Complemental strand, 36949313 - 36949148
Alignment:
Q  217 tttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccata-ttgagggtgttatttctcgaacgattacttacggtgtagtaccta 315  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||    
T  36949313 tttcgagtggtcttcgtaccatatagagtggtttaatcaaaagattaaaccatatttgagggtgttatttctcgaacgattatttacggtgtagcacgta 36949214  T
Q  316 atcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaac 382  Q
    || |||||  |||| || ||||||||||| | ||||| | |||||||||||||||||||||||||||    
T  36949213 attgaacatgtgaattgagttgttttatcttagaggc-gtgcggttgttagtctaccttgcacaaac 36949148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 37437525 - 37437445
Alignment:
Q  8 tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatcctaaatcatcaaa 88  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37437525 tttggtccttgccccttagtttcaagttatgtttcctatataaatagaggctaatcatttggtatatcctaaatcatcaaa 37437445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 37698641 - 37698571
Alignment:
Q  8 tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatccta 78  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37698641 tttggtcctttccccgtagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatccta 37698571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 265 - 380
Target Start/End: Original strand, 21323894 - 21324009
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||  | |||||||    
T  21323894 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggc-acacggttgt 21323992  T
Q  364 tagtctaccttgcacaa 380  Q
    |||||||||||||||||    
T  21323993 tagtctaccttgcacaa 21324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 265 - 380
Target Start/End: Complemental strand, 31731710 - 31731595
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||  | |||||||    
T  31731710 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggc-acacggttgt 31731612  T
Q  364 tagtctaccttgcacaa 380  Q
    |||||||||||||||||    
T  31731611 tagtctaccttgcacaa 31731595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 330 - 429
Target Start/End: Original strand, 13582684 - 13582782
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| ||  |||||||||||||||| |||| || |||||||    
T  13582684 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 13582782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 330 - 449
Target Start/End: Original strand, 24771351 - 24771469
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||  |||| ||||||||| | |||| || |||||||    
T  24771351 ctgggttgttttatcctggagacggcgcggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgac 24771449  T
Q  430 acaacccagtaatatcttcg 449  Q
     || ||| ||||||| ||||    
T  24771450 tcatcccggtaatattttcg 24771469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 314 - 451
Target Start/End: Complemental strand, 36428828 - 36428689
Alignment:
Q  314 taatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||||||||||||| | ||||| |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||  || |||||||||||||||    
T  36428828 taatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaaga 36428729  T
Q  412 gaacgacttgatcgtgacacaacccagtaatatcttcgtt 451  Q
    || |||| || ||||||| ||||| ||||| | |||||||    
T  36428728 gagcgacctggtcgtgactcaacctagtaacaacttcgtt 36428689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 41858694 - 41858596
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||| |||||||||||||| | |||| ||||||||||    
T  41858694 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtgac 41858596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 7805172 - 7805067
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||  ||| || |||||||    
T  7805172 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtgac 7805074  T
Q  430 acaaccc 436  Q
     ||||||    
T  7805073 tcaaccc 7805067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 14374236 - 14374131
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  14374236 ctgggctgttttatcctggagacggcgtggttgttagtctaccctgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 14374138  T
Q  430 acaaccc 436  Q
     ||||||    
T  14374137 tcaaccc 14374131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 265 - 441
Target Start/End: Original strand, 36942193 - 36942370
Alignment:
Q  265 accatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttg 362  Q
    |||||||||| ||||| ||| |||||||| ||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||||||||||||||| |||||    
T  36942193 accatattgaaggtgtaatt-ctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttg 36942291  T
Q  363 ttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| ||||| |||||    
T  36942292 atagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 36942370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 334 - 443
Target Start/End: Original strand, 1414049 - 1414157
Alignment:
Q  334 gttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaa 433  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| |||||||||| ||     
T  1414049 gttgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcac 1414147  T
Q  434 cccagtaata 443  Q
    ||||||||||    
T  1414148 cccagtaata 1414157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 36253927 - 36253815
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  36253927 ctgggctgttttatcctggaggcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 36253829  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  36253828 tcaccccggtaata 36253815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 265 - 435
Target Start/End: Original strand, 36937439 - 36937610
Alignment:
Q  265 accatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttg 362  Q
    |||||||||| ||||| ||| |||||||| ||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||||||||||||||| |||||    
T  36937439 accatattgaaggtgtaatt-ctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttg 36937537  T
Q  363 ttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
     |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| |||||    
T  36937538 atagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 36937610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 556791 - 556685
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |  ||||||||||||||||| |||| || ||||||| ||||    
T  556791 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 556692  T
Q  435 ccagtaa 441  Q
    | |||||    
T  556691 ctagtaa 556685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 561563 - 561457
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |  ||||||||||||||||| |||| || ||||||| ||||    
T  561563 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 561464  T
Q  435 ccagtaa 441  Q
    | |||||    
T  561463 ctagtaa 561457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 17505054 - 17504942
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| |||||| || |||||||    
T  17505054 ctgggctgttttatcctggagacgacgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgac 17504956  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  17504955 tcaccccggtaata 17504942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 805 - 881
Target Start/End: Original strand, 37434121 - 37434198
Alignment:
Q  805 ccataaaaact-gaagacagttggataaaaatgttcaaaaacgaagcaataaatttttgagcacattttagaaagtat 881  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  37434121 ccataaaaactagtagacaattggataaaaatgttcaaaaacgaaacaataaagtcttgagcacattttagaaagtat 37434198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 17510159 - 17510048
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  17510159 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 17510061  T
Q  430 acaacccagtaat 442  Q
     || ||| |||||    
T  17510060 tcaccccggtaat 17510048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 284 - 441
Target Start/End: Original strand, 29167919 - 29168078
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactggg--ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||   ||| ||| ||||  |||||||||||||| | | ||  |||||||||||||||||||||| ||||| |||||| ||||||||||     
T  29167919 ttctcgaacgattttctacagtgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaat 29168018  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||| |||||    
T  29168019 tttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 29168078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 330 - 429
Target Start/End: Original strand, 24435863 - 24435961
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||| ||  |||||||||||||||| |||| || |||||||    
T  24435863 ctgggctgttttatcctggagacggcgtggttgatagtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 24435961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 26667368 - 26667262
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  26667368 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 26667269  T
Q  435 ccagtaa 441  Q
    | |||||    
T  26667268 ctagtaa 26667262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 26938965 - 26938859
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  26938965 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 26938866  T
Q  435 ccagtaa 441  Q
    | |||||    
T  26938865 ctagtaa 26938859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 265 - 435
Target Start/End: Original strand, 13301410 - 13301584
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgt---agtacctaatcgaacagttgaactgggt-tgttttatcctggaggcggcgcgg 359  Q
    |||||||| ||||||||||||||| ||||||| |  |||||||    ||||  ||||||||||| |||||||||  |||||||||||||||||  | |||    
T  13301410 accatattagagggtgttatttcttgaacgatcatatacggtggtgcagtatttaatcgaacaggtgaactggggctgttttatcctggaggca-cacgg 13301508  T
Q  360 ttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    |||||||||||||||||||||  |||||||||| ||| |   |||||||||| | |||| || ||||||| |||||    
T  13301509 ttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacc 13301584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 42019674 - 42019562
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  42019674 ctgggctgttttatcctggagacggcacggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 42019576  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  42019575 tcaccccggtaata 42019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 449
Target Start/End: Original strand, 24776806 - 24776927
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgc---ggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgt 426  Q
    ||||| ||||||||||||||| ||||||   ||||| ||||||||||||||||| ||| ||||||| ||  |||||||||||||| | |||| || ||||    
T  24776806 ctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgt 24776904  T
Q  427 gacacaacccagtaatatcttcg 449  Q
    ||| || ||||||||||| ||||    
T  24776905 gactcaccccagtaatattttcg 24776927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 335 - 434
Target Start/End: Original strand, 32461548 - 32461647
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |  ||||||||||||||||| |||| || ||||||| ||||    
T  32461548 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 32461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 6514600 - 6514706
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||| ||  ||||| |||| |   ||||||||||||||||  |||||| ||||||| ||||    
T  6514600 ttgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactcaac 6514699  T
Q  435 ccagtaa 441  Q
    | |||||    
T  6514700 ctagtaa 6514706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 10759819 - 10759924
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |  ||||||||||||| ||| |||| || ||||||| ||||    
T  10759819 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgactcaac 10759917  T
Q  435 ccagtaa 441  Q
    | |||||    
T  10759918 ctagtaa 10759924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 12103121 - 12103015
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || |||| || ||||    
T  12103121 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaactcaac 12103022  T
Q  435 ccagtaa 441  Q
    | |||||    
T  12103021 ctagtaa 12103015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 36423733 - 36423627
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||| |||||||||||| ||||| |||||| ||||||||||  ||||| |||| ||  |||||||||||||||| |||| || ||| ||| ||||    
T  36423733 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactcaac 36423634  T
Q  435 ccagtaa 441  Q
    | |||||    
T  36423633 ctagtaa 36423627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 37248794 - 37248900
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  || ||||||| |   ||| |||||||||||| |||| || ||||||| ||||    
T  37248794 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaac 37248893  T
Q  435 ccagtaa 441  Q
    | |||||    
T  37248894 ctagtaa 37248900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 15395399 - 15395456
Alignment:
Q  216 gtttcgagtggtcttcgtaccatatagagtgg-tttagtcgaacgattaaaccatatt 272  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15395399 gtttcaagtggtcttcgtaccatatagagtggttttaatcgaacgattaaaccatatt 15395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 37652829 - 37652929
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||||| |||| ||||| |||||| ||||||||||  ||||  | ||||   |||||||||||||||| |||| |||||||||| ||||    
T  37652829 ttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaac 37652928  T
Q  435 c 435  Q
    |    
T  37652929 c 37652929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 41853649 - 41853551
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||| | ||| ||||||||||| |||||||| |||||| ||||| ||||||||||  |||||||||||||| | |||| || |||||||    
T  41853649 ctgggctgttttatcgtagagacggcgcggttgctagtctactttgcac-aacttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgac 41853551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 366 - 448
Target Start/End: Original strand, 1430013 - 1430095
Alignment:
Q  366 gtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttc 448  Q
    |||||||||||||||||| || || |||||| |||||||||||||| |||||| |  |||| || ||||| ||||||||||||    
T  1430013 gtctaccttgcacaaactcggatattgtcgtgaaacgtcttaaagaaaacgacatagtcgtaactcaaccaagtaatatcttc 1430095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 7451854 - 7451748
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||  ||||  |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  7451854 ttgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 7451755  T
Q  435 ccagtaa 441  Q
    | |||||    
T  7451754 ctagtaa 7451748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 26709205 - 26709091
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcaca-aacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||| |||||||||||||||  | |||||||| |||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || ||||||    
T  26709205 ctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 26709106  T
Q  429 cacaacccagtaata 443  Q
    | || ||| ||||||    
T  26709105 ctcaccccggtaata 26709091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 26978939 - 26978825
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcaca-aacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||| |||||||||||||||  | |||||||| |||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || ||||||    
T  26978939 ctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 26978840  T
Q  429 cacaacccagtaata 443  Q
    | || ||| ||||||    
T  26978839 ctcaccccggtaata 26978825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 39518506 - 39518400
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| || |||||||  |||||  ||| |   |||||||||||||||| |||| || ||||||| ||||    
T  39518506 ttgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 39518407  T
Q  435 ccagtaa 441  Q
    | |||||    
T  39518406 ctagtaa 39518400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 39523145 - 39523039
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  |||||  ||| |   |||||||||||||||| |||| || ||||||| ||||    
T  39523145 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 39523046  T
Q  435 ccagtaa 441  Q
    | |||||    
T  39523045 ctagtaa 39523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 42001530 - 42001424
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  ||| |||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  42001530 ttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 42001431  T
Q  435 ccagtaa 441  Q
    | |||||    
T  42001430 ctagtaa 42001424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 284 - 441
Target Start/End: Original strand, 12501845 - 12502004
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||   ||| ||| ||||  ||| |||||||||| | ||||| |||||||||||||||||||||| ||||| ||||||   ||||||||     
T  12501845 ttctcgaacgattttctacagtgcagtagttaaccgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgttttgcacaat 12501944  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     ||||| |||| |   |||||||||||||||| |||| || || |||| ||||| |||||    
T  12501945 tttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactcaacctagtaa 12502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 9079328 - 9079255
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatatt 272  Q
    |||| |||| || ||||||||||||||||| ||||||||||||| ||||||||| | ||| ||||||| ||||||    
T  9079328 actctttatatctcttcggtttcgagtggttttcgtaccatataaagtggtttaatagaa-gattaaatcatatt 9079255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 12045138 - 12045244
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||| | ||||||  |||||||||  ||||| |||| |   |||||||||||||||  |||| || ||||||| ||||    
T  12045138 ttgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaac 12045237  T
Q  435 ccagtaa 441  Q
    | |||||    
T  12045238 ctagtaa 12045244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 41996761 - 41996655
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  ||| |||||  ||||| |||| |   |||||||||||||||| | || || ||||||| ||||    
T  41996761 ttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaac 41996662  T
Q  435 ccagtaa 441  Q
    | |||||    
T  41996661 ctagtaa 41996655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 35679874 - 35679919
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  35679874 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 35679919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 824 - 881
Target Start/End: Original strand, 37438653 - 37438710
Alignment:
Q  824 ttggataaaaatgttcaaaaacgaagcaataaatttttgagcacattttagaaagtat 881  Q
    |||||||||||||| |||||| ||||||||||| | ||||||| | ||||||||||||    
T  37438653 ttggataaaaatgtccaaaaatgaagcaataaagtcttgagcataatttagaaagtat 37438710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 40147988 - 40147891
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||| ||||||||||| |||| ||||| |||| |||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactcaacc 40147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 37698505 - 37698461
Alignment:
Q  87 aaatgcggtccttttttattctattgccttattttacttttcact 131  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||    
T  37698505 aaatggggtccttttttattctattgccttattttgcctttcact 37698461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 3666028 - 3665922
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||| |||| |||| ||||| |||||| ||||||||||  ||||| |||| |   ||||||||| |||||| |||| |  ||||||| ||||    
T  3666028 ttgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactcaac 3665929  T
Q  435 ccagtaa 441  Q
    | |||||    
T  3665928 ctagtaa 3665922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 41587159 - 41587237
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  |||   ||||||   ||||||||||||||||    
T  41587159 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagaga 41587237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 37441650 - 37441613
Alignment:
Q  93 ggtccttttttattctattgccttattttacttttcac 130  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  37441650 ggtccttttttattttattgccttattttacctttcac 37441613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 37550031 - 37550076
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    ||||||||||||||||| |||| ||||| |||||| ||||||||||    
T  37550031 ttgttttatcctggaggtggcgtggttgatagtctgccttgcacaa 37550076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 7e-64; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 203 - 407
Target Start/End: Original strand, 795267 - 795476
Alignment:
Q  203 ttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgatt----aaaccatatt-gagggtgttatttctcgaacgatta 297  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||||||||    |||||||||| |||||||||||||||||||||||||    
T  795267 ttatgtcccgtcgatttcgagtggtctacgtaccatatagagtggtttaatcgaacgattgattaaaccatatttgagggtgttatttctcgaacgatta 795366  T
Q  298 cttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgta 397  Q
    ||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||  || ||||||||     
T  795367 cttacggtgcagtacgtaatcgaacaggtgaactgggctgttttatcctggaggcggcacggttgttagtctaccttgcataaactctggcagtgtcgtg 795466  T
Q  398 aaacgtctta 407  Q
     |||||||||    
T  795467 caacgtctta 795476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 208 - 449
Target Start/End: Original strand, 1688757 - 1688999
Alignment:
Q  208 tcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatatt-gagggtgttatttctcgaacgattacttacggtg 306  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1688757 tccctttggtttcgagtggtcttcgtaccatatagaatggtttaattgaacgattaaatcatatttgagggtgttatttctcgaacgattacttacggtg 1688856  T
Q  307 tagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtctt 406  Q
     ||||| ||||||||||| |||||| |  | |||||||||  | |||||||| |||||| ||||||||||||||||| |||||||| || ||||||||||    
T  1688857 cagtacgtaatcgaacaggtgaactagactattttatcctaaacgcggcgcgattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtctt 1688956  T
Q  407 aaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    ||||| | |||| || |||||||  ||| |  |||||||||||    
T  1688957 aaagaaagcgacctggtcgtgacttaactcgttaatatcttcg 1688999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 198 - 449
Target Start/End: Original strand, 27605008 - 27605248
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgatta 297  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |           ||||||||||||||||||||||||||| |||||    
T  27605008 actccttatgttccttcggtttcgagtggtcttcataccatatagagtggtttatt-----------accatattgagggtgttatttctcgaatgatta 27605096  T
Q  298 cttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgta 397  Q
    ||||||||| | ||| ||||||||||| |||||   | ||||||||||| ||||||| |  ||||||||||||||||||||||||| ||||||||  |      
T  27605097 cttacggtgcaatacataatcgaacaggtgaaccaagctgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcg 27605196  T
Q  398 aaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    ||| |||||||||||| ||||||| ||||||| |||||  ||||||| ||||    
T  27605197 aaatgtcttaaagagagcgacttggtcgtgactcaacctggtaatatattcg 27605248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 206 - 405
Target Start/End: Original strand, 1740970 - 1741178
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtac---catatagagtggtttagtcgaacgatt----aaaccatatt--gagggtgttatttctcgaacgatt 296  Q
    |||||| ||||||||||||| ||| |||||   ||||| |||||||||| ||||||||||    ||||||||||  ||||||||||||||||||||||||    
T  1740970 tgtcccgtcggtttcgagtgttctacgtacggccatattgagtggtttaatcgaacgattgattaaaccatattttgagggtgttatttctcgaacgatt 1741069  T
Q  297 acttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgt 396  Q
    |||||||||| ||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||||| | | |||||||||||||  ||||||||||     
T  1741070 acttacggtgcagtacgtaatcaaacaggtgaacttggttgttttatcctggaggcggcgcggttgttaatttgccttgcacaaactcaggtagtgtcgc 1741169  T
Q  397 aaaacgtct 405  Q
     ||||||||    
T  1741170 gaaacgtct 1741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 259 - 452
Target Start/End: Original strand, 2617177 - 2617372
Alignment:
Q  259 gattaaaccatattg--agggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcg 356  Q
    ||||||||||||||   || ||||||||||| ||||||||||||||||||  |||| |||||||||||  | ||| |  |||||||||||||||||||||    
T  2617177 gattaaaccatatttttagagtgttatttctagaacgattacttacggtgcggtacataatcgaacaggcggactagactgttttatcctggaggcggcg 2617276  T
Q  357 cggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcgttg 452  Q
    ||||||||||||||||||||||||||| | |||||| ||  |||||||||||||| | |||| || | ||||| |||||| |||||||||||||||    
T  2617277 cggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaaccctgtaatatcttcgttg 2617372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 25023807 - 25023993
Alignment:
Q  225 ggtcttcgtaccatatagagtggtttagtcgaacgatt----aaaccatatt--gagggtgttatttctcgaacgattacttacggtgtagtacctaatc 318  Q
    ||||| |||||| | | |||||||||| ||||||||||    ||||||||||  ||| ||||||||||| |||||||||||||||||| ||||| |||||    
T  25023807 ggtctacgtaccgttttgagtggtttaatcgaacgattgatcaaaccatattttgagtgtgttatttctagaacgattacttacggtgcagtacgtaatc 25023906  T
Q  319 gaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtct 405  Q
    |||||  |||| |||| |  | ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  25023907 gaacaagtgaattgggcttgtatatcctggaggcggcacggttgttagtctaccttgcacaaactgaggtagtgtcgtgaaacgtct 25023993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 26706951 - 26706823
Alignment:
Q  267 catattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgt---tttatcctggaggcggcgcggttgt 363  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||| | ||||||||||| ||||||||  |||   ||||||||||||||||||| |||||    
T  26706951 catattgagggtgttatttctcgaaccattacttacagtgcagtgcgtaatcgaacaggtgaactggactgtaattttatcctggaggcggcgcagttgt 26706852  T
Q  364 tagtctaccttgcacaaacttgggtagtg 392  Q
    ||||||||||||||||||||||| |||||    
T  26706851 tagtctaccttgcacaaacttggatagtg 26706823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 284 - 442
Target Start/End: Original strand, 21494251 - 21494408
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaact 383  Q
    ||||||||| ||||| ||| ||| | ||| |||| ||||||| |||||| | |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  21494251 ttctcgaacaattacatactgtgcaatacgtaattgaacagt-gaactgagctgttttatcccggagacggcgcggttgttagtctaccttgcacaaact 21494349  T
Q  384 tgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaat 442  Q
    |||||| |||||| | || ||||||||||| |||| || ||||||| ||| ||||||||    
T  21494350 tgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactcaatccagtaat 21494408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 265 - 436
Target Start/End: Original strand, 10586111 - 10586282
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| ||||  | ||||||||| ||||||||| |||||||||||||||||  | |||||||    
T  10586111 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttgatcgaacaggtgaactgggctgttttatcctggaggc-acacggttgt 10586209  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccc 436  Q
    |||||||||||||||||  | |||||||| ||| |   |||||||||| | |||| || ||||||| ||||||    
T  10586210 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 10586282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 278 - 449
Target Start/End: Original strand, 23074352 - 23074522
Alignment:
Q  278 tgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgca 377  Q
    ||||||||||||||| | || |||||||| ||||| ||||||||||| |||| ||| |  ||||||| |||| || ||||| |||||||| |||||| ||    
T  23074352 tgttatttctcgaacaagtatttacggtgcagtacgtaatcgaacaggtgaaatggcta-ttttatcttggatgcagcgcgtttgttagtataccttaca 23074450  T
Q  378 caaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    |||||||||||| ||  | ||||||||||||||| | ||||||| || ||||||| ||   |||||||||||    
T  23074451 caaacttgggtattgctgcaaaacgtcttaaagaaagcgacttggtcatgacacagcctgataatatcttcg 23074522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 265 - 441
Target Start/End: Complemental strand, 3672751 - 3672574
Alignment:
Q  265 accatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttg 362  Q
    |||||||||| ||||| ||| |||||||| ||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||||||||||||||| |||||    
T  3672751 accatattgaaggtgtaatt-ctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttg 3672653  T
Q  363 ttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| ||||| |||||    
T  3672652 atagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 3672574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 265 - 441
Target Start/End: Complemental strand, 3692783 - 3692606
Alignment:
Q  265 accatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttg 362  Q
    |||||||||| ||||| ||| |||||||| ||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||||||||||||||| |||||    
T  3692783 accatattgaaggtgtaatt-ctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttg 3692685  T
Q  363 ttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| ||||| |||||    
T  3692684 atagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 3692606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 336 - 442
Target Start/End: Complemental strand, 53119622 - 53119517
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||| ||  |||||||||||||||| |||| |||||||||| |||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacc 53119524  T
Q  436 cagtaat 442  Q
    | |||||    
T  53119523 cggtaat 53119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 336 - 436
Target Start/End: Complemental strand, 20810467 - 20810368
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||  |  ||||||||||||||||||||| || ||||||| |||||    
T  20810467 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 20810369  T

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Target: chr3; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 272 - 383
Target Start/End: Original strand, 1689896 - 1690007
Alignment:
Q  272 tgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctac 371  Q
    ||||||||||||||||| ||||||||||||||||| || || ||||||||||| ||||| |||  ||||| ||  ||||| |||| || |||||||||||    
T  1689896 tgagggtgttatttctcaaacgattacttacggtgcagcacgtaatcgaacaggtgaaccgggcagttttgtctaggaggtggcgtggatgttagtctac 1689995  T
Q  372 cttgcacaaact 383  Q
     |||||||||||    
T  1689996 tttgcacaaact 1690007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 282 - 449
Target Start/End: Original strand, 23071488 - 23071654
Alignment:
Q  282 atttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||||| ||| |||| ||||| ||||||||||| | || ||  |  ||||||| ||||||| || || |||||||| |||||| ||||||    
T  23071488 atttctcgaacgattatttaaggtgcagtacgtaatcgaacaggtaaaatgacta-ttttatcttggaggcagcacgtttgttagtataccttacacaaa 23071586  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    |||||||| || || ||||||||||||||| ||||| ||| || |||| |||||   |||||||||||    
T  23071587 cttgggtattgccgcaaaacgtcttaaagaaaacgatttggtcatgactcaacctgataatatcttcg 23071654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 13022128 - 13022023
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||| ||||| ||| |||| || |||||||    
T  13022128 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtgac 13022030  T
Q  430 acaaccc 436  Q
     ||||||    
T  13022029 tcaaccc 13022023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 33089343 - 33089448
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||| |||| |||||||| ||  |||||||||||||||| |||| || ||||||| |||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 33089441  T
Q  436 cagtaat 442  Q
    | |||||    
T  33089442 cggtaat 33089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 314 - 429
Target Start/End: Complemental strand, 55128909 - 55128793
Alignment:
Q  314 taatcgaacagttgaa--ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||||| |||||||||  ||||| ||||||||||||||| ||||||||||| ||||||||||| ||| ||||| ||||||| ||  ||||||||||||||    
T  55128909 taatcgtacagttgaaatctgggctgttttatcctggagacggcgcggttgctagtctaccttacac-aacttaggtagtgccgcgaaacgtcttaaaga 55128811  T
Q  412 gaacgacttgatcgtgac 429  Q
     |||||| || |||||||    
T  55128810 aaacgacctggtcgtgac 55128793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 17368820 - 17368708
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  17368820 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 17368722  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  17368721 tcaccccggtaata 17368708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 3476940 - 3477051
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  3476940 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 3477038  T
Q  430 acaacccagtaat 442  Q
     || ||| |||||    
T  3477039 tcaccccggtaat 3477051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 758367 - 758473
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  |||||||||| |   |||||||||||||||| |||  || ||||||| ||||    
T  758367 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaac 758466  T
Q  435 ccagtaa 441  Q
    | |||||    
T  758467 ctagtaa 758473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 17364166 - 17364052
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcaca-aacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || ||||||    
T  17364166 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 17364067  T
Q  429 cacaacccagtaata 443  Q
    | || ||| ||||||    
T  17364066 ctcaccccggtaata 17364052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 23666122 - 23666228
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  23666122 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 23666221  T
Q  435 ccagtaa 441  Q
    | |||||    
T  23666222 ctagtaa 23666228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 24038370 - 24038476
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  24038370 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 24038469  T
Q  435 ccagtaa 441  Q
    | |||||    
T  24038470 ctagtaa 24038476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 336 - 442
Target Start/End: Complemental strand, 26962154 - 26962049
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||| | ||||||||||||||||||| |||||| |||||| |   |||||||||||||||| |||  || ||||||| |||||    
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcac-aacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 26962056  T
Q  436 cagtaat 442  Q
    |||||||    
T  26962055 cagtaat 26962049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 15768185 - 15768297
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |  |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  15768185 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-agttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 15768283  T
Q  430 acaacccagtaata 443  Q
     || ||||||||||    
T  15768284 tcatcccagtaata 15768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 20090656 - 20090768
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  20090656 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 20090754  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  20090755 tcatcccggtaata 20090768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 20095781 - 20095893
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  20095781 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 20095879  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  20095880 tcatcccggtaata 20095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 34129163 - 34129275
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || |||||||    
T  34129163 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 34129261  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  34129262 tcagcccggtaata 34129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 447
Target Start/End: Original strand, 38436985 - 38437101
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||| ||| ||||||| ||||| |   |||||||||||||| |  ||| ||||||||||    
T  38436985 ctgggctgttttatcctggagacggcgtggttgttagtctacctttcac-aacttggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtgac 38437083  T
Q  430 acaacccagtaatatctt 447  Q
     |||||| ||||| ||||    
T  38437084 tcaacccggtaatttctt 38437101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 335 - 440
Target Start/End: Original strand, 39775727 - 39775832
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  39775727 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 39775826  T
Q  435 ccagta 440  Q
    | ||||    
T  39775827 ctagta 39775832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 17357939 - 17357839
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcaca-aacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || ||||||    
T  17357939 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtga 17357840  T
Q  429 c 429  Q
    |    
T  17357839 c 17357839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 330 - 449
Target Start/End: Original strand, 4117594 - 4117712
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||  ||| ||||||| || | |||| || |||||||    
T  4117594 ctgggctgttttatcctggagacagcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtgac 4117692  T
Q  430 acaacccagtaatatcttcg 449  Q
     || ||||||||||| ||||    
T  4117693 tcaccccagtaatattttcg 4117712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 12965872 - 12965955
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgac 418  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| | |||||||||||||||||| ||||    
T  12965872 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgac 12965955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 31002854 - 31002748
Alignment:
Q  273 gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctacc 372  Q
    ||||||||||||||||||||||| |  || |||| ||||  ||||| ||||| |||||| || ||||||||||||||||   | ||||||||||||||||    
T  31002854 gagggtgttatttctcgaacgatcatatatggtgcagtatttaatcaaacaggtgaactaggctgttttatcctggagg-tacacggttgttagtctacc 31002756  T
Q  373 ttgcacaa 380  Q
    ||||||||    
T  31002755 ttgcacaa 31002748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 336 - 443
Target Start/End: Complemental strand, 54270739 - 54270633
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  ||| |||||||||| | |||| || ||||||| || ||    
T  54270739 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactcaccc 54270641  T
Q  436 cagtaata 443  Q
    | ||||||    
T  54270640 cggtaata 54270633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 3033738 - 3033632
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||| ||||||| | ||||| |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| ||||    
T  3033738 ttgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaac 3033639  T
Q  435 ccagtaa 441  Q
    | |||||    
T  3033638 ctagtaa 3033632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 3419089 - 3418983
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||| ||| |||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| ||||||| ||||||| ||||    
T  3419089 ttgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgactcaac 3418990  T
Q  435 ccagtaa 441  Q
    | |||||    
T  3418989 ctagtaa 3418983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 14438694 - 14438800
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| | |||| ||||||||||  |||||||||| |   |||||||||||||||  |||| || ||||||| ||||    
T  14438694 ttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaac 14438793  T
Q  435 ccagtaa 441  Q
    | |||||    
T  14438794 ctagtaa 14438800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 18467319 - 18467213
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||  |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  18467319 ttgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 18467220  T
Q  435 ccagtaa 441  Q
    | |||||    
T  18467219 ctagtaa 18467213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 20520148 - 20520042
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||| ||||||||||| ||||| |||||| |||||||||| |||||| |||| |   ||||||||||||||||  ||| || ||||||| ||||    
T  20520148 ttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactcaac 20520049  T
Q  435 ccagtaa 441  Q
    | |||||    
T  20520048 ctagtaa 20520042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 49971423 - 49971529
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| | ||| |||||| ||||||||||  |||| ||||| |   |||||||||||||||| |||| || ||||||| ||||    
T  49971423 ttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactcaac 49971522  T
Q  435 ccagtaa 441  Q
    | |||||    
T  49971523 ctagtaa 49971529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 15763024 - 15763136
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |  |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  15763024 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-agttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 15763122  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  15763123 tcatcccggtaata 15763136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 335 - 435
Target Start/End: Complemental strand, 55431409 - 55431309
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||| ||  || |  ||||||   |||||||||||||||| |||| |||||||||| ||||    
T  55431409 ttgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaac 55431310  T
Q  435 c 435  Q
    |    
T  55431309 c 55431309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 330 - 381
Target Start/End: Original strand, 3482417 - 3482468
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  3482417 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaaa 3482468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 7571217 - 7571323
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| | ||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  7571217 ttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 7571316  T
Q  435 ccagtaa 441  Q
    | |||||    
T  7571317 ctagtaa 7571323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 268 - 418
Target Start/End: Original strand, 7806485 - 7806633
Alignment:
Q  268 atattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaac-agttgaactgggttgttttatcctggaggcggcgcggttgttag 366  Q
    ||||||||||||||| |||| ||||| |||  || ||||||  |  |||||| || | |||||||| ||||||||||||| ||||| ||| ||||| |||    
T  7806485 atattgagggtgttaattcttgaacggttatctatggtgtaaaaggtaatcgcacaatttgaactgagttgttttatcctcgaggcagcgtggttgatag 7806584  T
Q  367 tctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgac 418  Q
    |||||||   ||||  || ||||||||||| || ||||||||||||| ||||    
T  7806585 tctacct---acaattttaggtagtgtcgtgaatcgtcttaaagagagcgac 7806633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 380
Target Start/End: Complemental strand, 18472124 - 18472056
Alignment:
Q  314 taatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    |||||||||||||| | ||||| |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  18472124 taatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 18472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 27709030 - 27708959
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtctt 406  Q
    |||||||||||||||||||||| ||||| |||||||||||||| ||  ||||| |||| | | |||||||||    
T  27709030 ttgttttatcctggaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacgtctt 27708959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 8069773 - 8069668
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  ||||||| || ||||  |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  8069773 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcac-aatttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 8069675  T
Q  435 ccagtaa 441  Q
    | |||||    
T  8069674 ctagtaa 8069668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 429
Target Start/End: Complemental strand, 8883264 - 8883170
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    |||||||||||||||||| ||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || |||||||    
T  8883264 ttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 8883170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 23661463 - 23661508
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  23661463 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 23661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 53358314 - 53358218
Alignment:
Q  359 gttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcgttgatga 456  Q
    |||||||||||| ||||| |||||  || ||| ||||| |||||||||||||| | |||| ||  |||||| ||||||| ||||||||||| ||||||    
T  53358314 gttgttagtctaacttgc-caaacgaggttagcgtcgtgaaacgtcttaaagaaagcgacctggccgtgactcaacccattaatatcttcgatgatga 53358218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 13474707 - 13474771
Alignment:
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    |||||||||||||||||  ||||||||||| |   ||||||||||||| ||||||||| ||||||    
T  13474707 tagtctaccttgcacaattttgggtagtgttgagtaacgtcttaaagaaaacgacttggtcgtga 13474771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 14554760 - 14554724
Alignment:
Q  95 tccttttttattctattgccttattttacttttcact 131  Q
    ||||||||||||||||||||||||||||| |||||||    
T  14554760 tccttttttattctattgccttattttacctttcact 14554724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 29350334 - 29350228
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||  ||| | | |||| ||||||||||  ||||| |||| |   |||||||||||||| | |||| || ||||||| ||||    
T  29350334 ttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactcaac 29350235  T
Q  435 ccagtaa 441  Q
    | |||||    
T  29350234 ctagtaa 29350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 32474626 - 32474724
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    |||||||||||||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||||||||| ||||| ||||| ||||||  |||||||||    
T  32474626 ttctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggagacggcgtggttgatagtctgtcttgcacaa 32474724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 45904443 - 45904548
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| |||||||||||| ||||  | ||||||||||||||||||||||||  | ||||||||  || |   |||||||||| |||||| || |||||||    
T  45904443 ctgggctgttttatcctgaaggca-cacggttgttagtctaccttgcacaatttcgggtagtgctgtgatttgtcttaaagaaaacgacatggtcgtgac 45904541  T
Q  430 acaaccc 436  Q
     ||||||    
T  45904542 tcaaccc 45904548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 45904899 - 45904948
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||||    
T  45904899 ctgggttgttttatcctggaggc-acacggttgttagtctaccctgcacaa 45904948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 30341838 - 30341918
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    ||||| |||||||||||||||  || ||||||| ||||||||||| ||| || || ||||||| ||  ||||||||||||||    
T  30341838 ctgggctgttttatcctggagatggtgcggttgctagtctaccttacac-aatttaggtagtgccgcgaaacgtcttaaaga 30341918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 3e-63; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 206 - 449
Target Start/End: Complemental strand, 10642940 - 10642692
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgatt----aaaccatatt-gagggtgttatttctcgaacgattactt 300  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||    |||||||||| ||||||||||||||| ||||||||||||    
T  10642940 tgtcccgtcggtttcgactggtctacgtaccatatagagtggtttaatcgaacgattgattaaaccatatttgagggtgttatttctggaacgattactt 10642841  T
Q  301 acggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaa 400  Q
    |||||| ||||| ||||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| || || ||||| |   |||    
T  10642840 acggtgcagtacgtaatcgaacaagtgaactgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaa 10642741  T
Q  401 cgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    ||||||||||| | |||| |  ||||||| |||||| ||||||||||||    
T  10642740 cgtcttaaagaaagcgacattgtcgtgactcaacccggtaatatcttcg 10642692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 206 - 435
Target Start/End: Original strand, 5600839 - 5601071
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatatt-gagggtgttatttctcgaacgattacttacgg 304  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||  || |||||||||| ||||||||||||||||||||||||| ||||||    
T  5600839 tgtcccttcgatttcgagtggtcttcgtaccatatagagtggtttaatcgaaaaatcaaaccatatttgagggtgttatttctcgaacgattagttacgg 5600938  T
Q  305 tgt--agtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacg 402  Q
    ||   ||||| ||||||||||  |||| |||  ||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||  |||||    
T  5600939 tgcgcagtacgtaatcgaacatgtgaattggactgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacg 5601038  T
Q  403 tcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||| | |||| || ||||||| |||||    
T  5601039 tcttaaagaaagcgacctggtcgtgactcaacc 5601071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 246 - 413
Target Start/End: Complemental strand, 22713880 - 22713713
Alignment:
Q  246 ggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcc 345  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||| |||| |||||  ||||||| | | ||||||||    
T  22713880 ggtttaatcgaacgattaaaccatattgaggatgttatttttcgaacgattacttacggtgcaatacgtaattgaacaagtgaactgagctattttatcc 22713781  T
Q  346 tggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    || ||| |||||||||||||||||| |||||||||||| | ||||||  | |||||||||||||||||    
T  22713780 tgaaggtggcgcggttgttagtctatcttgcacaaactcgagtagtgctgcaaaacgtcttaaagaga 22713713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 284 - 442
Target Start/End: Complemental strand, 29325682 - 29325525
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaact 383  Q
    ||||||||| ||||| ||  ||| ||||| |||| ||||||| || ||||| | ||||||| |||||||| | | |||||||||||||||||||||||||    
T  29325682 ttctcgaacaattacataatgtgcagtacgtaattgaacagt-gatctgggctattttatcttggaggcgtcacagttgttagtctaccttgcacaaact 29325584  T
Q  384 tgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaat 442  Q
    | |||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||    
T  29325583 taggtagtgtcgtaaaacgtcttaaaaagagcgacttgatcgtgactcaacccggtaat 29325525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 338 - 442
Target Start/End: Complemental strand, 3902006 - 3901902
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccca 437  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||||||||||||||||| |||| || ||||||| ||||||     
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccg 3901907  T
Q  438 gtaat 442  Q
    |||||    
T  3901906 gtaat 3901902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 336 - 435
Target Start/End: Original strand, 12183000 - 12183099
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||| |||| || ||||||| |||||    
T  12183000 tgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 12183099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 19478249 - 19478138
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  19478249 ctgggctgttttatcgtggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 19478151  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  19478150 tcaacccggtaat 19478138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 22703360 - 22703472
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| |||||| | ||||||||    
T  22703360 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaaacgacataatcgtgac 22703458  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  22703459 tcaccccggtaata 22703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 29491231 - 29491343
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | ||||||| |||||||    
T  29491231 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacttggtcgtgac 29491329  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  29491330 tcaccccggtaata 29491343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 325 - 413
Target Start/End: Original strand, 5740779 - 5740867
Alignment:
Q  325 ttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    |||||||| | | ||||||||| | ||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  5740779 ttgaactgagctattttatcctagtggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtcttaaagaga 5740867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 331 - 442
Target Start/End: Original strand, 13605087 - 13605197
Alignment:
Q  331 tgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgaca 430  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| | || |  |||||||     
T  13605087 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgact 13605185  T
Q  431 caacccagtaat 442  Q
    |||||| |||||    
T  13605186 caacccggtaat 13605197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 11614091 - 11614197
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||| | |||| | |||||||| ||||||||||| || | |||||||| ||||    
T  11614091 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgccataaaacgttttaaagagaacaacctcatcgtgactcaac 11614190  T
Q  435 ccagtaa 441  Q
    | |||||    
T  11614191 ctagtaa 11614197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 330 - 448
Target Start/End: Original strand, 24192474 - 24192591
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||  ||||||| ||  |||||||||||||| | |||| || |||||||    
T  24192474 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 24192572  T
Q  430 acaacccagtaatatcttc 448  Q
     || ||| |||||| ||||    
T  24192573 tcaccccggtaatagcttc 24192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 21396800 - 21396688
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| |||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  21396800 ctgggctgttttatcctggagatggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 21396702  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  21396701 tcaccccggtaata 21396688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 22698237 - 22698349
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  22698237 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 22698335  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  22698336 tcatcccggtaata 22698349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 34142181 - 34142083
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| | |   |||||||||||||| | |||| || |||||||    
T  34142181 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgac 34142083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 34154797 - 34154699
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| | |   |||||||||||||| | |||| || |||||||    
T  34154797 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgac 34154699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 34376020 - 34375922
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| || ||||| |||||| ||||| ||||||| ||  |||||||||||||| | |||| ||||||||||    
T  34376020 ctgggctgttttatcctggagacggcgcggttgctaatctacgttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgac 34375922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 330 - 448
Target Start/End: Original strand, 24191377 - 24191494
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||  ||||||||||||||| ||||  ||||||| ||  |||||||||||||| | |||| || |||||||    
T  24191377 ctgggctgttttatcctggagacggcgcggttactagtctaccttgcac-aactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 24191475  T
Q  430 acaacccagtaatatcttc 448  Q
     || ||| |||||| ||||    
T  24191476 tcaccccggtaatagcttc 24191494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 336 - 442
Target Start/End: Complemental strand, 31981655 - 31981550
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || ||||||| || ||    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 31981557  T
Q  436 cagtaat 442  Q
    | |||||    
T  31981556 cggtaat 31981550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 336 - 428
Target Start/End: Original strand, 2818147 - 2818238
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||||||||||||| ||||||||||  ||||||||||||||| ||||| ||||||  || ||||||||||||||| | |||| || ||||||    
T  2818147 tgttttatcctggagacggcgcggtttctagtctaccttgcac-aacttaggtagtaacgcaaaacgtcttaaagaaagcgacctggtcgtga 2818238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 326 - 449
Target Start/End: Original strand, 11956691 - 11956814
Alignment:
Q  326 tgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcg 425  Q
    ||||||||| ||||||| | |||||| || |  |||||||||||||||||||||||||| |  ||| || | |||||||||||||||| |||| || ||     
T  11956691 tgaactgggatgttttaacttggaggtggtgttgttgttagtctaccttgcacaaacttcgtaagtatcatgaaacgtcttaaagagagcgacctggtca 11956790  T
Q  426 tgacacaacccagtaatatcttcg 449  Q
    |||| ||||||  |||| ||||||    
T  11956791 tgactcaacccgataatctcttcg 11956814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 331 - 442
Target Start/End: Original strand, 17281558 - 17281669
Alignment:
Q  331 tgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgaca 430  Q
    |||| |||||||||||  |||||  ||||||||||||||||||| ||||||   |||||||| ||  |||||||||||||| | |||| || |||||||     
T  17281558 tgggctgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgact 17281657  T
Q  431 caacccagtaat 442  Q
    |||||| |||||    
T  17281658 caacccggtaat 17281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 6407859 - 6407965
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| | ||| ||||  ||||| |||| |   ||||||||| |||||| |||| |||||||||| ||||    
T  6407859 ttgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactcaac 6407958  T
Q  435 ccagtaa 441  Q
    | |||||    
T  6407959 ctagtaa 6407965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 11570748 - 11570854
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| | |||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || | ||||| ||||    
T  11570748 ttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaac 11570847  T
Q  435 ccagtaa 441  Q
    | |||||    
T  11570848 ctagtaa 11570854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 12689067 - 12688989
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    |||||||||||||||| ||||| ||||| |||||| ||||||||||  ||||| ||| ||  |||||||||||||||||    
T  12689067 ttgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagaga 12688989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 21309127 - 21309049
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    |||||||||||||||||||||| ||||| |||||| | ||||||||  ||||| |||| | | ||||||||||||||||    
T  21309127 ttgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagaga 21309049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 342 - 443
Target Start/End: Complemental strand, 21401844 - 21401744
Alignment:
Q  342 atcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
    ||||||||| ||||||||||| ||||||||||| ||| ||||| ||||||| ||  |||||||||||||| | |||| || ||||||| || ||| ||||    
T  21401844 atcctggagacggcgcggttgctagtctaccttccac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcatcccggtaa 21401746  T
Q  442 ta 443  Q
    ||    
T  21401745 ta 21401744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 440
Target Start/End: Original strand, 6112973 - 6113076
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||  |  |||| |||||| |  ||||||||||| | | || |||||||||| |||||    
T  6112973 tgttttatcctggaggcg-cacggttattagtctaccttgcacaatttcaggtaatgtcgtgattcgtcttaaagaaagcaacctgatcgtgactcaacc 6113071  T
Q  436 cagta 440  Q
    |||||    
T  6113072 cagta 6113076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 17964558 - 17964634
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  |||| ||||| |   ||||||||||||||    
T  17964558 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 13660105 - 13660050
Alignment:
Q  356 gcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||||||||||| ||||||||||||| || |||| |||||| ||||||||||||||    
T  13660105 gcggttgttagtttaccttgcacaaaattaggtaatgtcgtgaaacgtcttaaaga 13660050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 335 - 434
Target Start/End: Original strand, 24589163 - 24589262
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||| ||||| ||||| ||||||| |||||||||  ||||  ||||||   |||||| ||||||||| |||  |||||||||| ||||    
T  24589163 ttgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactcaac 24589262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 8747878 - 8747772
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||||||||||  |||| ||| ||  |||||||||  ||||| ||||||    ||||||||||||||| |||| || ||||||| ||||    
T  8747878 ttgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaac 8747779  T
Q  435 ccagtaa 441  Q
    | |||||    
T  8747778 ctagtaa 8747772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 16836155 - 16836231
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||||||||||||||||||||| ||||| |||||| ||||| ||||  ||||| |||| |   ||||||||||||||    
T  16836155 ttgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 3e-63; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 246 - 449
Target Start/End: Complemental strand, 34644743 - 34644540
Alignment:
Q  246 ggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcc 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||| ||| | ||||||||||    
T  34644743 ggtttaatcgaacgattaaaccatattgagggtgttatttctcgaacggttacttacggtgcagtacgtaatcgaacaggtgagctgagctgttttatcc 34644644  T
Q  346 tggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatc 445  Q
    || ||||||||||||||||||| |||||| |||||||| || ||||||||  |||||||||||||| | |||| |||||||||| |||||| ||||||||    
T  34644643 tgtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactcaacccggtaatatc 34644544  T
Q  446 ttcg 449  Q
    ||||    
T  34644543 ttcg 34644540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 198 - 448
Target Start/End: Complemental strand, 17359766 - 17359520
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatatt-gagggtgttatttctcgaacgatt 296  Q
    |||||||  ||| |||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| || |||||| ||||||||| ||||    
T  17359766 actccttccgtctcttcggtttcgagtagtcttcgtaccatatagagtggtttaatggaacgattaaaccatatttgaaggtgttgtttctcgaatgatt 17359667  T
Q  297 acttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgt 396  Q
    || ||||||| | ||| ||||||||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||||| |||||||| ||     
T  17359666 acatacggtgcaatacgtaatcgaacaggtgaactgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgg 17359567  T
Q  397 aaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttc 448  Q
     |||||||||||||| | |     ||||||||| |||||| |||||||||||    
T  17359566 gaaacgtcttaaagaaagc-----gatcgtgactcaacccggtaatatcttc 17359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 210 - 383
Target Start/End: Complemental strand, 3258335 - 3258162
Alignment:
Q  210 ccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgattacttacggtgtag 309  Q
    ||||| |||| ||||||||||| ||| ||||||||||||||| |  ||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||     
T  3258335 ccttccgttttgagtggtcttcatactatatagagtggtttaatttaactattaaaccatattgatggtgttatttctcgaacaattacttacggtataa 3258236  T
Q  310 tacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaact 383  Q
    ||| |||||| |||| ||||||| ||||||||||| | ||||| || |||||||||||||||| ||||||||||    
T  3258235 tacataatcgtacaggtgaactgagttgttttatcttagaggcagcacggttgttagtctaccatgcacaaact 3258162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 198 - 324
Target Start/End: Complemental strand, 19725074 - 19724948
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgatta 297  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| | ||||||||||||||||||||||    
T  19725074 actccttctgtcccttcagtttcgagtggtcttcgtaccatatagagtggtttaaacgaacaattaaaccatattaaaggtgttatttctcgaacgatta 19724975  T
Q  298 cttacggtgtagtacctaatcgaacag 324  Q
    | ||||||| ||||| |||||||||||    
T  19724974 catacggtgcagtacgtaatcgaacag 19724948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 284 - 429
Target Start/End: Original strand, 8082975 - 8083120
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcg-aacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaac 382  Q
    ||||||| ||||||| ||  ||| ||||| |||||| |||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  8082975 ttctcgagcgattacatattgtgcagtacgtaatcgtaacagt-gatctgggctgttttatcttggaggcggcgcggttgttagtctaccttgcactaac 8083073  T
Q  383 ttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    |||| ||||| ||| |||||||||||||||| |||| ||||||||||    
T  8083074 ttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtgac 8083120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 331 - 441
Target Start/End: Complemental strand, 24490132 - 24490022
Alignment:
Q  331 tgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgaca 430  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||||| |||  || |||||||     
T  24490132 tgggctgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgact 24490033  T
Q  431 caacccagtaa 441  Q
    |||||| ||||    
T  24490032 caacccggtaa 24490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 274 - 380
Target Start/End: Original strand, 3997995 - 3998100
Alignment:
Q  274 agggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctacct 373  Q
    |||||||||||||||||||||| |  ||||||| ||||  ||||||||||| |||||||||||||||||||||||||||  | ||||||||||||||| |    
T  3997995 agggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggttgttttatcctggaggc-acacggttgttagtctactt 3998093  T
Q  374 tgcacaa 380  Q
    |||||||    
T  3998094 tgcacaa 3998100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 278 - 392
Target Start/End: Original strand, 17682451 - 17682565
Alignment:
Q  278 tgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgca 377  Q
    |||||||||| |||| |||||||||||| |||||| |||||| |||  ||||||| | ||||||||||||||||| || |||||| ||| ||||||||||    
T  17682451 tgttatttctagaactattacttacggtatagtacgtaatcgcacatgtgaactgagctgttttatcctggaggcagcacggttgatagcctaccttgca 17682550  T
Q  378 caaacttgggtagtg 392  Q
    |||| ||||||||||    
T  17682551 caaatttgggtagtg 17682565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 10120811 - 10120907
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| |||||||||| |||||    
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacc 10120907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 205 - 411
Target Start/End: Complemental strand, 29236463 - 29236267
Alignment:
Q  205 atgtcccttcggtttcgagtggtcttcgtaccatat-agagtggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgattacttacg 303  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||           || |||||||||| |||||||||| |||||||||||||||||    
T  29236463 atgtcccttcggtttcgagtggtctttgtaccatatgagagtggttt-----------tataccatattgaaggtgttatttttcgaacgattacttacg 29236375  T
Q  304 gtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgt 403  Q
    ||  | ||| ||||||||||   ||| | | |||||  |||||  | |||||||||||| |||||||||||| ||||| |||  ||||||||| ||||||    
T  29236374 gtacaatacgtaatcgaacatgggaattagattgttaaatcctaaaagcggcgcggttgatagtctaccttgaacaaatttgaatagtgtcgtgaaacgt 29236275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 30255530 - 30255638
Alignment:
Q  286 ctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttg 385  Q
    ||||||||||||||||||||| ||||| ||||||||| | ||||||| |||||||||  ||| || |||||| ||||||||||| | |||||||||||||    
T  30255530 ctcgaacgattacttacggtgcagtacttaatcgaactggtgaactgtgttgttttagtctgaagacggcgcagttgttagtcttctttgcacaaacttg 30255629  T
Q  386 ggtagtgtc 394  Q
     ||||||||    
T  30255630 agtagtgtc 30255638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 357 - 449
Target Start/End: Complemental strand, 39319706 - 39319614
Alignment:
Q  357 cggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||||||||||| | |||| |||||||||| |||||| ||||| ||||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactcaacccggtaatctcttcg 39319614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 653144 - 653046
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| ||  |||||||||||||||| |||| || |||||||    
T  653144 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 653046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 334 - 449
Target Start/End: Original strand, 10318777 - 10318892
Alignment:
Q  334 gttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaa 433  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||   |||  ||| |||||||||||| |||| || ||||||| |||    
T  10318777 gttgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactcaa 10318876  T
Q  434 cccagtaatatcttcg 449  Q
    ||| ||||| ||||||    
T  10318877 cccggtaatttcttcg 10318892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 271 - 411
Target Start/End: Original strand, 31298323 - 31298459
Alignment:
Q  271 ttgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtcta 370  Q
    |||| |||||||||||||||||||||| ||||||||   ||| ||||||||    |||| |||  |||||||||||||||||| | | ||||||||||||    
T  31298323 ttgatggtgttatttctcgaacgattatttacggtgcgatacttaatcgaag---tgaattggactgttttatcctggaggcg-cacagttgttagtcta 31298418  T
Q  371 ccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    ||||||||||||| | |||||||| | ||||||||||||||    
T  31298419 ccttgcacaaactcgagtagtgtcatgaaacgtcttaaaga 31298459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 47046307 - 47046412
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| |||||| || ||||||| || ||    
T  47046307 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccc 47046405  T
Q  436 cagtaat 442  Q
    | |||||    
T  47046406 cggtaat 47046412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 8980279 - 8980391
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  8980279 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 8980377  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  8980378 tcaccccggtaata 8980391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 8985399 - 8985511
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  8985399 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 8985497  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  8985498 tcaccccggtaata 8985511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 13700611 - 13700499
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  13700611 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 13700513  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  13700512 tcaccccggtaata 13700499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 21299827 - 21299939
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  21299827 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 21299925  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  21299926 tcaccccggtaata 21299939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 51019367 - 51019479
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  51019367 ctgggatgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 51019465  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  51019466 tcaccccggtaata 51019479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 54991587 - 54991475
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  54991587 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 54991489  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  54991488 tcaccccggtaata 54991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 265 - 380
Target Start/End: Complemental strand, 41816951 - 41816836
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||||| ||| |||| |||| |||||||||||| | || |||  ||||||||||| |||||  | |||||||    
T  41816951 accatattagagggtgttatttctcgaacgattatttatggtgcagtatctaatcgaacaggtaaattggactgttttatcctagaggc-tcacggttgt 41816853  T
Q  364 tagtctaccttgcacaa 380  Q
    ||| |||||||||||||    
T  41816852 tagcctaccttgcacaa 41816836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 330 - 449
Target Start/End: Complemental strand, 13710769 - 13710652
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  13710769 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgac-tggtcgtgac 13710672  T
Q  430 acaacccagtaatatcttcg 449  Q
     || ||| ||||||| ||||    
T  13710671 tcaccccggtaatattttcg 13710652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 16841203 - 16841272
Alignment:
Q  22 cttagtttcaggttatgtttcctatataaata---gaggctaatcaattggtatatcctaaatcatcaaa 88  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||||||||||    
T  16841203 cttagtttcaggttatgtttcctatataaatagaggaggctaatcagttggtatatcgtaaatcatcaaa 16841272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 336 - 443
Target Start/End: Complemental strand, 41393340 - 41393234
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || ||||||| || ||    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 41393242  T
Q  436 cagtaata 443  Q
    | ||||||    
T  41393241 cggtaata 41393234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 336 - 449
Target Start/End: Complemental strand, 13695254 - 13695142
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||| ||||||||| | |||| || ||||||| || ||    
T  13695254 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcaccc 13695156  T
Q  436 cagtaatatcttcg 449  Q
    | ||||||| ||||    
T  13695155 cggtaatattttcg 13695142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 21304947 - 21305059
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  ||| |||||||||| | |||| || |||||||    
T  21304947 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtcgtgac 21305045  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  21305046 tcaccccggtaata 21305059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 221 - 418
Target Start/End: Original strand, 30564297 - 30564496
Alignment:
Q  221 gagtggtcttcgtaccatatagagtggttt-agtcgaacgattaaaccatattgag--ggtgttatttctcgaacgattacttacggtgtagtacctaat 317  Q
    ||||||||| ||||||||||| |||||||| | ||||| ||||||||||||||     |||||   ||||| ||| ||||| ||  ||| || |||||||    
T  30564297 gagtggtctacgtaccatataaagtggttttaatcgaatgattaaaccatattttttaggtgtatattctcaaacaattacatattgtgcagcacctaat 30564396  T
Q  318 cgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacga 417  Q
      |||| | |||||| | ||||||||||| |||||||| |  |||||||||||||||||||||| |||||||||| ||  |||||||||| ||||| |||    
T  30564397 taaacact-gaactgagctgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcga 30564495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 36359395 - 36359283
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  36359395 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 36359297  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  36359296 tcatcccggtaata 36359283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 39999170 - 39999058
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  39999170 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 39999072  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  39999071 tcatcccggtaata 39999058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 40004128 - 40004016
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  40004128 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 40004030  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  40004029 tcatcccggtaata 40004016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 53797730 - 53797618
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || |||||||    
T  53797730 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 53797632  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  53797631 tcaccccggtaata 53797618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 54343304 - 54343192
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| |||||||||||| || ||||||||||| ||||||||||||||| || | |||||||| ||  |||||||||||||||| |||| || |||||||    
T  54343304 ctgggctgttttatcctgtagacggcgcggttgctagtctaccttgcac-aattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 54343206  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  54343205 tcatcccggtaata 54343192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 54348458 - 54348346
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  54348458 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 54348360  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  54348359 tcatcccggtaata 54348346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 265 - 380
Target Start/End: Original strand, 7903034 - 7903149
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||| ||||||||||||||||||| |  ||||||| ||||  ||||||||||| |||||| || |||||||||||| ||||  | | |||||    
T  7903034 accatattagagagtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactaggctgttttatcctgaaggc-acaccgttgt 7903132  T
Q  364 tagtctaccttgcacaa 380  Q
    |||||||||||||||||    
T  7903133 tagtctaccttgcacaa 7903149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 36354277 - 36354179
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  36354277 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 36354179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 5271418 - 5271524
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  5271418 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 5271517  T
Q  435 ccagtaa 441  Q
    | |||||    
T  5271518 ctagtaa 5271524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 13521991 - 13522097
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  13521991 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 13522090  T
Q  435 ccagtaa 441  Q
    | |||||    
T  13522091 ctagtaa 13522097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 31269130 - 31269024
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  || || |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  31269130 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 31269031  T
Q  435 ccagtaa 441  Q
    | |||||    
T  31269030 ctagtaa 31269024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 31273617 - 31273511
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  31273617 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 31273518  T
Q  435 ccagtaa 441  Q
    | |||||    
T  31273517 ctagtaa 31273511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 37259876 - 37259982
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||| |||||| |   |||||||||||||| | |||| || ||||||| ||||    
T  37259876 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactcaac 37259975  T
Q  435 ccagtaa 441  Q
    | |||||    
T  37259976 ctagtaa 37259982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 37264563 - 37264669
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||| ||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  37264563 ttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 37264662  T
Q  435 ccagtaa 441  Q
    | |||||    
T  37264663 ctagtaa 37264669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 51698013 - 51697907
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||| | |||||| | |||||||||||| ||| |||  || ||||||| ||||    
T  51698013 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtcttaaaaagagcgatctggtcgtgactcaac 51697914  T
Q  435 ccagtaa 441  Q
    | |||||    
T  51697913 ctagtaa 51697907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 29085864 - 29085747
Alignment:
Q  265 accatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaac-agttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| ||||| ||| || || | ||||| ||   ||||||||| ||||||||||||||||      
T  29085864 accacattgaggatgttatttctcaaacgattacttacggtgaagtacgtaaacgcacaatttgaattgatatgttttatcttggaggcggcgcggttta 29085765  T
Q  364 tagtctaccttgcacaaa 381  Q
    |||||||  |||||||||    
T  29085764 tagtctaatttgcacaaa 29085747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 8030475 - 8030581
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||| |||  |||| ||||||| |||||||||  ||||| |||| |  ||||||||||||||||| |||| |||| ||||  ||||    
T  8030475 ttgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctgattgtgattcaac 8030574  T
Q  435 ccagtaa 441  Q
    | |||||    
T  8030575 ctagtaa 8030581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 31729386 - 31729480
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    |||||||||||||||||||||| | ||| | |||| ||||||||||  |||||||||| |   |||||||||||||||| |||| ||||| ||||    
T  31729386 ttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctgatcatgac 31729480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 31765982 - 31765904
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   ||||||||||||||||    
T  31765982 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaga 31765904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 33468972 - 33469078
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||| |||||| |||| |||||  ||||| ||||||||||  ||||| |||| |  |||||||||||||||||||||| |  ||||||| ||||    
T  33468972 ttgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactcaac 33469071  T
Q  435 ccagtaa 441  Q
    | |||||    
T  33469072 ctagtaa 33469078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 5928195 - 5928318
Alignment:
Q  314 taatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | ||||| |||||| ||||||||||  ||| | |||| |   |||| |||||||||    
T  5928195 taatcgaacagttgcagctgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaaga 5928294  T
Q  412 gaacgacttgatcgtgacacaacc 435  Q
    || |||| || ||||||| |||||    
T  5928295 gagcgacctggtcgtgactcaacc 5928318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 284 - 441
Target Start/End: Complemental strand, 8693860 - 8693701
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||   ||| ||| ||||  |||||||||||||| | ||| | |||||||||||| ||||||||| ||||| |||| |  |||||||||     
T  8693860 ttctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaat 8693761  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     |||||||| | |   |||||||||||||||| |||| || ||||||| ||||| |||||    
T  8693760 tttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 8693701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 9764015 - 9764065
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    ||||| ||||||||||| ||| ||| |||||||||||||||||||||||||    
T  9764015 ctgggctgttttatcctagagacggtgcggttgttagtctaccttgcacaa 9764065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 16421125 - 16421019
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||| |||||||| ||||| |||||| ||||||||||  ||||| |||| |   ||| ||||||| |||| |||| || ||||||| ||||    
T  16421125 ttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgactcaac 16421026  T
Q  435 ccagtaa 441  Q
    | |||||    
T  16421025 ctagtaa 16421019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 33463355 - 33463461
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| |||||  | ||| ||||||||||  ||||  |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  33463355 ttgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 33463454  T
Q  435 ccagtaa 441  Q
    | |||||    
T  33463455 ctagtaa 33463461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 335 - 435
Target Start/End: Complemental strand, 47574721 - 47574621
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||| |||||| | ||| || | |  |||||||||  ||||||||||||   |||||||||||||||| |||| |||| ||||| ||||    
T  47574721 ttgttttatcctggatgcggcgtgattgatattttgtcttgcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacctgattgtgactcaac 47574622  T
Q  435 c 435  Q
    |    
T  47574621 c 47574621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 12878335 - 12878229
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||| ||||||| |||| | ||| |||||| | ||||||||  |||   ||||||   |||||||||||||||| |||| |||||||||| ||||    
T  12878335 ttgttttattctggaggtggcgtgattgatagtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaac 12878236  T
Q  435 ccagtaa 441  Q
    | |||||    
T  12878235 ctagtaa 12878229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 31099352 - 31099260
Alignment:
Q  359 gttgttagtctaccttgcacaaacttgggtagtgt--cgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    |||| |||||||||||||||||  ||||| |||||   || ||||||||| |||||| ||||||| ||||||| ||||||  |||| ||||||    
T  31099352 gttgatagtctaccttgcacaactttgggcagtgtgctgtgaaacgtcttgaagagagcgacttggtcgtgacccaacccgataatctcttcg 31099260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 112; Significance: 4e-56; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 198 - 392
Target Start/End: Complemental strand, 43338 - 43143
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatattgagggtgtt-atttctcgaacgatt 296  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | || ||| |||||||||| ||||    
T  43338 actcattatgtccattcggtttcgagtggtcttcgtaccatatagagtggtttaatcaaacgattaaaccatatttaaggggtttatttctcgaatgatt 43239  T
Q  297 acttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtg 392  Q
    |||||||||||||||| |||||||| |||| |||  |||||||||||||| ||| |||| ||||||||| | ||| ||||||||||||||||||||    
T  43238 acttacggtgtagtacgtaatcgaatagttaaacaaggttgttttatcctagagacggcacggttgttaatttacattgcacaaacttgggtagtg 43143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 198 - 449
Target Start/End: Original strand, 11658746 - 11659001
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaa----cgattaaaccatatt-gagggtgttatttctcgaac 292  Q
    ||||||| |||||| ||||||||||||| ||| ||||||||||||||||||||| |||||    ||||||| ||||||| |||||||||||||||||| |    
T  11658746 actccttttgtcccgtcggtttcgagtgatctacgtaccatatagagtggtttaatcgaatgatcgattaagccatatttgagggtgttatttctcga-c 11658844  T
Q  293 gattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtg 392  Q
    || ||||||||||| | ||| ||||||||||| ||||||||  ||||||||| ||||||||| || ||||||||||||||||||||||| | | ||||||    
T  11658845 gactacttacggtgcaatacgtaatcgaacaggtgaactggactgttttatcatggaggcggtgcagttgttagtctaccttgcacaaattcgagtagtg 11658944  T
Q  393 tcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
     ||| ||| |||||||||| | ||||||| || |||| |||||   |||||||||||    
T  11658945 ccgtgaaatgtcttaaagaaagcgacttggtcatgactcaacctgataatatcttcg 11659001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 28945388 - 28945191
Alignment:
Q  217 tttcgagtggtcttcgtaccatatagagtggtttagtcgaacgatt----aaaccatatt-gagggtgttatttctcgaacgattacttacggtgtagta 311  Q
    |||||| |||||| |||||| | |||||||||||| ||||||||||    |||||||||| ||||||||||||||| ||| |||||||||||||| |||     
T  28945388 tttcgaatggtctacgtaccgtgtagagtggtttaatcgaacgattgattaaaccatatttgagggtgttatttctagaatgattacttacggtgcagtg 28945289  T
Q  312 cctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaa 409  Q
    | ||||||||||| || | || | |||||||||||||||||  ||||||||||||| ||||||||||||||| | |||||| ||  ||||||||||||    
T  28945288 cgtaatcgaacaggtggattgagctgttttatcctggaggcaacgcggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaa 28945191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 206 - 448
Target Start/End: Original strand, 39542386 - 39542617
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgattacttacggt 305  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| |           |||||||||||||||||||||||  |||||||||||| |||    
T  39542386 tgtcccttcggtttttagtggtcttcgtaccatatagagtggtttaat-----------accatattgagggtgttatttcttcaacgattacttatggt 39542474  T
Q  306 gtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtct 405  Q
    | | ||  ||||||||||| |||||  |||||| ||||||||||||| |||| |||||||||||||||| |||||| |   ||||||| || ||||||||    
T  39542475 gcaatatgtaatcgaacaggtgaacaaggttgtcttatcctggaggcagcgcagttgttagtctaccttacacaaattcaagtagtgttgtgaaacgtct 39542574  T
Q  406 taaagagaacgacttgatcgtgacacaacccagtaatatcttc 448  Q
    ||||||||  |||||  ||||||| |||||  ||||| |||||    
T  39542575 taaagagagtgacttagtcgtgactcaacctggtaatctcttc 39542617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 206 - 429
Target Start/End: Complemental strand, 39543116 - 39542904
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgattacttacggt 305  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||| |           |||||| |||||||||||||||| ||||||||||||| |||    
T  39543116 tgtcccttcgattttgagtggtcttcgtaccatataaagtggtttaat-----------accatactgagggtgttatttcttgaacgattacttatggt 39543028  T
Q  306 gtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtc-taccttgcacaaacttgggtagtgtcgtaaaacgtc 404  Q
    | ||||| ||||||||||| | ||||||| | |||||||||||||||   ||||||||||||| |||||| ||||||||   |||||| ||| |||||||    
T  39543027 gcagtacgtaatcgaacag-taaactgggctattttatcctggaggcaatgcggttgttagtcttaccttacacaaactcatgtagtgccgtgaaacgtc 39542929  T
Q  405 ttaaagagaacgacttgatcgtgac 429  Q
    ||||||||| |||| ||||||||||    
T  39542928 ttaaagagagcgacctgatcgtgac 39542904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 206 - 355
Target Start/End: Complemental strand, 27556794 - 27556640
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgatt----aaaccata-ttgagggtgttatttctcgaacgattactt 300  Q
    |||||| ||||||||| ||||||||| ||||||| ||||||||||| ||||||||||    |||||||| ||||||||||||||||||||||||||||||    
T  27556794 tgtcccgtcggtttcgggtggtcttcataccatagagagtggtttaatcgaacgattgattaaaccatacttgagggtgttatttctcgaacgattactt 27556695  T
Q  301 acggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggc 355  Q
    |||||| | ||| |||| |||||  |||||||| |||||||||| ||||||||||    
T  27556694 acggtgcaatacgtaattgaacatgtgaactggattgttttatcatggaggcggc 27556640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 265 - 436
Target Start/End: Complemental strand, 19538552 - 19538381
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||  |||||  |  |||||||||||  |||| || | |||||    
T  19538552 accatattagagagtgttatttctcgaacgattatttacggtgtagtacttaatcgaacaagtgaaccagactgttttatcctaaaggc-gcacagttgt 19538454  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccc 436  Q
    |||||||||||||||||||| || ||||| ||| ||| |||||||||| | |||| || ||||||| ||||||    
T  19538453 tagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactcaaccc 19538381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 278 - 456
Target Start/End: Complemental strand, 160194 - 160016
Alignment:
Q  278 tgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgca 377  Q
    ||||||||||| ||||||||||||||||| | ||| ||||  || || |||| ||   |||||||||  ||||||| |||||||| ||| ||||||||||    
T  160194 tgttatttctcaaacgattacttacggtgcaatacataattaaataggtgaattgaactgttttatctcggaggcgacgcggttgatagcctaccttgca 160095  T
Q  378 caaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcgttgatga 456  Q
    |||  |||||||||||||| |||||| ||||||||| |||| || ||||| | ||||| |||||| |||||| ||||||    
T  160094 caattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaacctagtaatctcttcgctgatga 160016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 411
Target Start/End: Complemental strand, 28855164 - 28855025
Alignment:
Q  272 tgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaact-gggttgttttatcctggaggcggcgcggttgttagtcta 370  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||   | | |||||||| || ||   ||||||||||||    
T  28855164 tgagggtgttatttctcgaacgattatttacggtgtagtacttaatcgaacaggtgaactaggggcttctaatcctgga-gccgcatagttgttagtcta 28855066  T
Q  371 ccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    ||||| |||||||||| ||||| ||| ||||||||||||||    
T  28855065 ccttgtacaaacttggatagtgccgtgaaacgtcttaaaga 28855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 273 - 436
Target Start/End: Original strand, 6297823 - 6297985
Alignment:
Q  273 gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctacc 372  Q
    ||||||||||||||||||||||| |  ||||||| ||||  ||||||||||| |||||| || |||||||||||||||||  | ||||||||||||||||    
T  6297823 gagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactaggatgttttatcctggaggc-acacggttgttagtctacc 6297921  T
Q  373 ttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccc 436  Q
    ||||||||  | |||||||| ||| |   |||||||||| | |||| || ||||||| ||||||    
T  6297922 ttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 6297985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 331 - 436
Target Start/End: Complemental strand, 42914742 - 42914638
Alignment:
Q  331 tgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgaca 430  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||||| || |||||||     
T  42914742 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgact 42914644  T
Q  431 caaccc 436  Q
    ||||||    
T  42914643 caaccc 42914638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 284 - 441
Target Start/End: Complemental strand, 30651078 - 30650919
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||   ||||||| ||||  |||||||||||||| | ||||| |||||||||| ||||||||||| ||||| |||||| ||||||||||     
T  30651078 ttctcgaacgattttctacggtgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaat 30650979  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     ||||| |||| |   |||||||||||||||| |||  || ||||||| ||||| |||||    
T  30650978 tttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaa 30650919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 5089373 - 5089292
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgac 418  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||| ||  |||||||||||||||| ||||    
T  5089373 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaagagagcgac 5089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 10160723 - 10160829
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  10160723 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 10160822  T
Q  435 ccagtaa 441  Q
    | |||||    
T  10160823 ctagtaa 10160829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 25497324 - 25497430
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||| ||||| |||||    |||||||||||||||| |||| || ||||||| ||||    
T  25497324 ttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgactcaac 25497423  T
Q  435 ccagtaa 441  Q
    | |||||    
T  25497424 ctagtaa 25497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 31326835 - 31326729
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||||| |||| ||||| |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| ||||    
T  31326835 ttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgtgactcaac 31326736  T
Q  435 ccagtaa 441  Q
    | |||||    
T  31326735 ctagtaa 31326729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 42723445 - 42723557
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  42723445 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 42723543  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  42723544 tcatcccggtaata 42723557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 42728614 - 42728726
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  42728614 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 42728712  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  42728713 tcatcccggtaata 42728726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 44096403 - 44096291
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  44096403 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 44096305  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  44096304 tcatcccggtaata 44096291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 44754590 - 44754702
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  44754590 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 44754688  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  44754689 tcatcccggtaata 44754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 44759756 - 44759868
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  44759756 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 44759854  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  44759855 tcatcccggtaata 44759868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 271 - 441
Target Start/End: Original strand, 9180658 - 9180829
Alignment:
Q  271 ttgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtc 368  Q
    |||||||||| ||| |||||||||||   ||| ||| ||||  ||||| |||||||| | ||||| |||||||||||||||||||||| ||||| |||||    
T  9180658 ttgagggtgtaatt-ctcgaacgattttctacagtgcagtagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtc 9180756  T
Q  369 taccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
    | ||||||||||  ||||  |||| |   |||||||||||||||| |||| || ||||||| ||||| |||||    
T  9180757 tgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 9180829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 338 - 441
Target Start/End: Complemental strand, 29677474 - 29677371
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccca 437  Q
    ||||||||||||||||||| ||||| |||||| | ||||||||  ||||| |||| |   |||||||||||||||| |||| |||||||||| ||||| |    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactcaaccta 29677375  T
Q  438 gtaa 441  Q
    ||||    
T  29677374 gtaa 29677371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 335 - 434
Target Start/End: Complemental strand, 30658359 - 30658260
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||| |||||| |   |||||||||||||||| |||| || ||||||| ||||    
T  30658359 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 30658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 1934992 - 1935098
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  1934992 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 1935091  T
Q  435 ccagtaa 441  Q
    | |||||    
T  1935092 ctagtaa 1935098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 7737850 - 7737956
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |  ||||| ||||||||||| |||| || ||||||| ||||    
T  7737850 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactcaac 7737949  T
Q  435 ccagtaa 441  Q
    | |||||    
T  7737950 ctagtaa 7737956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 25478296 - 25478402
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||| |||||||||||| ||||| |||||| ||||||||||  ||||| ||||||   |||||||||||||||| |||| || | ||||| ||||    
T  25478296 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgactcaac 25478395  T
Q  435 ccagtaa 441  Q
    | |||||    
T  25478396 ctagtaa 25478402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 40518466 - 40518578
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||||  | || ||||||| ||  |||||||||||||| | |||| || |||||||    
T  40518466 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-tatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 40518564  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  40518565 tcaccccggtaata 40518578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 441
Target Start/End: Original strand, 9189737 - 9189908
Alignment:
Q  271 ttgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtc 368  Q
    |||||||||| ||| |||||||||||   ||| ||| ||||  ||||| |||||||| | ||||| |||||||||||||||||||||| ||||| |||||    
T  9189737 ttgagggtgtaatt-ctcgaacgattttctacagtgcagtagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtc 9189835  T
Q  369 taccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
    | ||||||||||  ||||  |||| |   |||||||||||||||| | || || ||||||| ||||| |||||    
T  9189836 tgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacctagtaa 9189908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 40392419 - 40392340
Alignment:
Q  331 tgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||| ||||||||||||||| ||||| ||||| ||||||||||||||| ||||| ||||||| ||  ||||||||||||||    
T  40392419 tgggctgttttatcctggagacggcgtggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaaga 40392340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 17327512 - 17327453
Alignment:
Q  326 tgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttg 385  Q
    ||||||||  ||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  17327512 tgaactggactgttttatcctggaggcggcgcgattgttggtctaccttacacaaacttg 17327453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 284 - 429
Target Start/End: Complemental strand, 18344580 - 18344433
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||||||||| ||||| ||||  |||||| ||||||||||     
T  18344580 ttctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggagccggcgtggttaatagtctgccttgcacaat 18344481  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
     ||||| |||| |   |||||||||||||||| |||| || |||||||    
T  18344480 tttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 18344433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 28751723 - 28751835
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||| ||||||| | ||||||||||||| ||||| ||||||| ||  |||||||| ||||| | |||| || |||||||    
T  28751723 ctgggctgttttatcctggagacggtgcggttgcttgtctaccttgcac-aacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtgac 28751821  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  28751822 tcaccccggtaata 28751835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 42926758 - 42926866
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaac--gtcttaaagagaacgacttgatcgtgacaca 432  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||  ||||| |||| |   ||||  |||||||||||| || | |||||||||| ||    
T  42926758 ttgtattatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctgatcgtgactca 42926857  T
Q  433 acccagtaa 441  Q
    ||| |||||    
T  42926858 acctagtaa 42926866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 22844954 - 22844898
Alignment:
Q  202 cttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaac 258  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||| |||| ||||||    
T  22844954 cttacgtcccttcggtttcgagtggtctttgtatcatatagagtgatttaatcgaac 22844898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 44683322 - 44683278
Alignment:
Q  217 tttcgagtggtcttcgtaccatatagagtggtttagtcgaacgat 261  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  44683322 tttcgagtggtcttcgtaccatatagagtggtttaattgaacgat 44683278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 5771158 - 5771076
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtaccatata--gagtggtttagtcgaacgattaaaccata-ttgagggtgttattt 285  Q
    |||| ||||| ||||||||| | |||||||||||||  |||||||||| || || |||||||||||| |||||||||||||||    
T  5771158 tgtcacttcgttttcgagtgattttcgtaccatatatagagtggtttaatcaaatgattaaaccatatttgagggtgttattt 5771076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 30637047 - 30636994
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggttta 251  Q
    ||||||| |||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  30637047 actccttctgtcccatcggttttgagcggtcttcgtaccgtatagagtggttta 30636994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 335 - 435
Target Start/End: Complemental strand, 12797021 - 12796921
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||| ||||| ||||| ||||||  |||| ||||  ||||| |||| |  ||||||||||||||||| |||  || ||||||| ||||    
T  12797021 ttgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaac 12796922  T
Q  435 c 435  Q
    |    
T  12796921 c 12796921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 19578413 - 19578513
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||| ||||||||| ||  ||||| |||||| ||||||||||  || ||||||| |  ||||||||||||||||| |||  || ||||||| ||||    
T  19578413 ttgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaac 19578512  T
Q  435 c 435  Q
    |    
T  19578513 c 19578513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 335 - 428
Target Start/End: Original strand, 35638996 - 35639089
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    |||||||||||||||||||||| ||||| ||  ||  |||||||||  ||||| |||| |   |||||||||||| ||| |||| |||||||||    
T  35638996 ttgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaaagagcgacctgatcgtga 35639089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 4e-50; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 206 - 449
Target Start/End: Original strand, 7874963 - 7875210
Alignment:
Q  206 tgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatatt-gagggtgttatttctcgaacgattacttacgg 304  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  7874963 tgtcccttcggtttcgggtggccttcgtaccatatagactggtttaatcgaacaattaaaccatatttgaggatgttatttctcgaacgattacttacgg 7875062  T
Q  305 tgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtg---tcgtaaaac 401  Q
    || ||||| |||| || ||  ||| ||||  || ||||||||| ||||||||| ||||||||||||| ||||||||||| | ||||||   | || ||||    
T  7875063 tgcagtacgtaattgatcaagtgagctggactgctttatcctgcaggcggcgcagttgttagtctacgttgcacaaactcgagtagtgatattgtgaaac 7875162  T
Q  402 gtcttaaagagaacgacttgatcgtgacacaacccagtaatatcttcg 449  Q
    |||||||||| | |||| ||||| | || |||||  ||||||||||||    
T  7875163 gtcttaaagaaagcgacctgatcattactcaacctggtaatatcttcg 7875210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 19640458 - 19640295
Alignment:
Q  271 ttgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtcta 370  Q
    ||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||| | ||||||||||||||||| || ||||| ||||||||    
T  19640458 ttgagggtgttatctctcgaacgattatttacggtgcagtacgtaatcgaacaggtgaactgagctgttttatcctggaggc-gcacggttcttagtcta 19640360  T
Q  371 ccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||| ||||| |||||| |||||||||||||| |  ||| |||||||||| |||||    
T  19640359 ccttgcacaaactcgggtaatgtcgtgaaacgtcttaaagaaagagacatgatcgtgactcaacc 19640295  T

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Target: chr7; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 265 - 436
Target Start/End: Complemental strand, 27256409 - 27256238
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| | ||  ||||||||||| ||||||||| |||||||||||||||||  | |||||||    
T  27256409 accatattagagggtgttatttctcgaacgatcatatacggtgcaatatttaatcgaacaggtgaactgggctgttttatcctggaggc-acacggttgt 27256311  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccc 436  Q
    |||||||||||||||||  | |||||||| ||| |   |||||||||| | |||| || ||||||| ||||||    
T  27256310 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 27256238  T

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Target: chr7; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 267 - 413
Target Start/End: Original strand, 24169968 - 24170114
Alignment:
Q  267 catattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttag 366  Q
    |||||||||||| |||||||||| | | ||||||| |||| ||||| |||||||| |  |||| ||| ||||||| ||||||| ||||| |||||||||     
T  24169968 catattgagggttttatttctcgcatgtttacttatggtgaagtacgtaatcgaaaaagtgaattggattgttttttcctggatgcggcacggttgttat 24170067  T
Q  367 tctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
     |||||||||||||| | || || |||||| ||||||||||||||||    
T  24170068 cctaccttgcacaaattcggatactgtcgtgaaacgtcttaaagaga 24170114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 336 - 436
Target Start/End: Complemental strand, 24528449 - 24528350
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| || || ||||||||||||||||| |||| || ||||||| |||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 24528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 9973563 - 9973452
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| ||||| ||  |||||||||||||| | |||| || |||||||    
T  9973563 ctgggttgttttatcctggagacggcgtggttgttcgtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 9973465  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  9973464 tcaacccggtaat 9973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 16539406 - 16539518
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  16539406 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 16539504  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  16539505 tcaccccggtaata 16539518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 16626256 - 16626144
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  16626256 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 16626158  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  16626157 tcaccccggtaata 16626144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 42572046 - 42571934
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  42572046 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 42571948  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  42571947 tcaccccggtaata 42571934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 4579604 - 4579498
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  4579604 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 4579505  T
Q  435 ccagtaa 441  Q
    | |||||    
T  4579504 ctagtaa 4579498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 336 - 442
Target Start/End: Complemental strand, 43892953 - 43892848
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||||||||| |||| |||||||||| ||||| ||||||| ||| |||||||||||||| | |||| || ||||||| || ||    
T  43892953 tgttttatcctggagacggcgcggttgctagtttaccttgcac-aacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 43892855  T
Q  436 cagtaat 442  Q
    | |||||    
T  43892854 cggtaat 43892848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 33238103 - 33237991
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  33238103 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 33238005  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  33238004 tcatcccggtaata 33237991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 47999076 - 47998964
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  47999076 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 47998978  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  47998977 tcatcccggtaata 47998964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 304 - 441
Target Start/End: Complemental strand, 26341328 - 26341189
Alignment:
Q  304 gtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaac 401  Q
    ||||||||  |||||||||||||| | ||||  |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||     
T  26341328 gtgtagtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaat 26341229  T
Q  402 gtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
    |||||||||||| |||| || ||||||| ||||| |||||    
T  26341228 gtcttaaagagagcgacctggtcgtgactcaacctagtaa 26341189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 9650966 - 9651072
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  9650966 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 9651065  T
Q  435 ccagtaa 441  Q
    | |||||    
T  9651066 ctagtaa 9651072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 21081033 - 21081147
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcaca-aacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||| ||||||||||||||| ||| ||||||| |||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || ||||||    
T  21081033 ctgggctgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21081132  T
Q  429 cacaacccagtaata 443  Q
    | || ||| ||||||    
T  21081133 ctcaccccggtaata 21081147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 47177119 - 47177224
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    |||||||||||| || ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || ||||||| || ||    
T  47177119 tgttttatcctgaagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 47177217  T
Q  436 cagtaat 442  Q
    | |||||    
T  47177218 cggtaat 47177224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 2234624 - 2234704
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||| ||  ||||||||||||||    
T  2234624 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaaga 2234704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 19309605 - 19309685
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||| ||| ||  ||||||||||||||    
T  19309605 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtggtgccgcgaaacgtcttaaaga 19309685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 211 - 333
Target Start/End: Complemental strand, 19687252 - 19687140
Alignment:
Q  211 cttcggtttcgagtggtcttcgtaccatata-gagtggtttagtcgaacgattaaaccatattgagggtgttatttctcgaacgattacttacggtgtag 309  Q
    |||||||||||||| |||||||||||||||| |||||||||| |           ||||||||||| ||||||||||||||||||||||||||  || ||    
T  19687252 cttcggtttcgagtagtcttcgtaccatataagagtggtttaat-----------accatattgagagtgttatttctcgaacgattacttaccatgcag 19687164  T
Q  310 tacctaatcgaacagttgaactgg 333  Q
    ||| ||||||| ||| ||||||||    
T  19687163 tacttaatcgatcaggtgaactgg 19687140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 381
Target Start/End: Original strand, 20932642 - 20932759
Alignment:
Q  265 accatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaaca-gttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||  |||| |||||  ||||| |||||||||||||| |||  || | |||||||     
T  20932642 accatattgaaggtgttatttctcgaacgattacttacgatgcagtatgtaattgaacacattgaattgggttgttttatcttggttgcagtgcggttga 20932741  T
Q  364 tagtctaccttgcacaaa 381  Q
    |||  |||||| ||||||    
T  20932742 tagcttaccttacacaaa 20932759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 32212648 - 32212760
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| | ||||||||| ||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || |||||||    
T  32212648 ctgggctgttttatcctggagacagcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 32212746  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  32212747 tcaccccggtaata 32212760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 33226509 - 33226417
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||||||||||| | ||||| ||||||||||||||||||||  ||||| ||||||| ||  |||||||||||||||| |||| || |||||||    
T  33226509 tgttttatcctggtgacggcgtggttgttagtctaccttgca-taacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 33226417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 33243280 - 33243168
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  ||||||||||||||||  ||| || |||||||    
T  33243280 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgtgac 33243182  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  33243181 tcatcccggtaata 33243168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 47993901 - 47993789
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || | |||||    
T  47993901 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgtgac 47993803  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  47993802 tcatcccggtaata 47993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 380
Target Start/End: Original strand, 40865281 - 40865396
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  || |||| | ||   ||||||| || ||||||| | |||||||||||||||||  | |||||||    
T  40865281 accatattagagggtgttatttctcgaacgatcatatatggtgcaatattcaatcgaataggtgaactgcgctgttttatcctggaggca-cacggttgt 40865379  T
Q  364 tagtctaccttgcacaa 380  Q
    |||||||||||||||||    
T  40865380 tagtctaccttgcacaa 40865396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 12934498 - 12934400
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||  ||||||| ||  ||| |||||||||| | |||| || |||||||    
T  12934498 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgac 12934400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 17495504 - 17495426
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaa 409  Q
    ||||| ||||||||| ||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  ||||||||||||    
T  17495504 ctgggctgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaa 17495426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 17557710 - 17557788
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaa 409  Q
    ||||| ||||||||| ||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  ||||||||||||    
T  17557710 ctgggctgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaa 17557788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 335 - 434
Target Start/End: Complemental strand, 23866164 - 23866065
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  23866164 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 23866065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 339 - 442
Target Start/End: Original strand, 28292506 - 28292607
Alignment:
Q  339 tttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccag 438  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||| ||  |||||||||||| ||| |||| || |||||||  ||||| |    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtgacttaacccgg 28292603  T
Q  439 taat 442  Q
    ||||    
T  28292604 taat 28292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 8076146 - 8076040
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||| ||| ||||| ||||||  |||||||||  || || |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  8076146 ttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 8076047  T
Q  435 ccagtaa 441  Q
    |||||||    
T  8076046 ccagtaa 8076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 23246932 - 23247026
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||| ||||||||||| |||| || |||||||    
T  23246932 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgac 23247026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 4930329 - 4930223
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||| |  ||| |||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  4930329 ttgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 4930230  T
Q  435 ccagtaa 441  Q
    | |||||    
T  4930229 ctagtaa 4930223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 13314235 - 13314341
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||||||| || || || |||||||||||||||||  ||||| |||  |   |||||||||||||||| |||  || ||||||| ||||    
T  13314235 ttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactcaac 13314334  T
Q  435 ccagtaa 441  Q
    | |||||    
T  13314335 ctagtaa 13314341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 44423136 - 44423242
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||||||||||  |||| |||||| ||||| ||||  ||||  |||| |   |||||||||||||||| |||  |||||||||| ||||    
T  44423136 ttgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaac 44423235  T
Q  435 ccagtaa 441  Q
    | |||||    
T  44423236 ctagtaa 44423242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 44510676 - 44510754
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||  |||| |  |||||||||||||||||    
T  44510676 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagaga 44510754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 441
Target Start/End: Original strand, 3357634 - 3357737
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccca 437  Q
    ||||||| ||||| ||||| ||||| |||||| ||||||||||  |||||  ||  ||  |||||||||||||||| |||| || ||||||| ||||| |    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactcaaccta 3357733  T
Q  438 gtaa 441  Q
    ||||    
T  3357734 gtaa 3357737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 8268426 - 8268295
Alignment:
Q  300 tacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgta 397  Q
    ||||||| ||||  |||||||||||||| | ||||  |||||||||| |||||| |||| ||||| ||||||  |||||||||  ||||  |||| |  |    
T  8268426 tacggtgcagtagttaatcgaacagttgtagctggacttgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccaca 8268327  T
Q  398 aaacgtcttaaagagaacgacttgatcgtgac 429  Q
    |||||||||||||||| |||| || |||||||    
T  8268326 aaacgtcttaaagagagcgacctggtcgtgac 8268295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 27238338 - 27238232
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||| || |||||||| | ||| |||||| |||| |||||  ||| | |||| |  ||||||||||||||||| |||| || ||||||| ||||    
T  27238338 ttgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 27238239  T
Q  435 ccagtaa 441  Q
    | |||||    
T  27238238 ctagtaa 27238232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 6590982 - 6591027
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    ||||||||||||| |||||||| ||||| |||||| ||||||||||    
T  6590982 ttgttttatcctgaaggcggcgtggttgatagtctgccttgcacaa 6591027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 15642329 - 15642232
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaa 433  Q
    |||||| ||||||||||| ||  |||| |||| |  ||| |||||  |||| ||||||| | |||||||||||| ||| |||| ||||||||||||||    
T  15642329 tgttttgtcctggaggcgacgtagttgatagtttgtcttccacaattttggatagtgtcatgaaacgtcttaaaaagagcgacctgatcgtgacacaa 15642232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 2e-48; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 198 - 447
Target Start/End: Complemental strand, 14724487 - 14724232
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaa----cgattaaaccata-ttgagggtgttatttctcgaac 292  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| |||| |||||||||||||||||    
T  14724487 actccttctgtcccatcggtttcgagtggtcttcgtaccatatagagtggtttaatcgaacgatcgattaaaccatatttgacggtgttatttctcgaac 14724388  T
Q  293 gattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcgg-cgcggttgttagtctaccttgcacaaacttgggtagt 391  Q
    |||||||||  ||  | ||| ||||||||||  ||| ||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||  | ||||    
T  14724387 gattacttatagtacaatacataatcgaacatgtgatctgtgttgttttatcctggaggcggtcacggttgttagtctaccttgtacaaactcagatagt 14724288  T
Q  392 gtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaatatctt 447  Q
    | |  |||||||  |||||| |||||| || | ||||||||| |  ||||||||||    
T  14724287 gccacaaaacgtagtaaagaaaacgacctggttgtgacacaatcatgtaatatctt 14724232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 198 - 383
Target Start/End: Original strand, 25188135 - 25188319
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccata-ttgagggtgttatttctcgaacgatt 296  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| ||||| ||||||||||||||  | ||||||      
T  25188135 actccttttgtcccttcggtttcgagtggtcttcgtaccatattgagtggtttaatcaaacgattaacccatatttgagggtgttatt--tagaacgagc 25188232  T
Q  297 acttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaact 383  Q
    |||||||||| | ||| ||||||||||  ||||||| ||||||||||| ||||| || | |||||||||||||||||||||||||||    
T  25188233 acttacggtgcaatacataatcgaacatgtgaactgagttgttttatcttggagacgacacggttgttagtctaccttgcacaaact 25188319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 33055205 - 33055078
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| |||||||||||||||||||| |||| ||||| || ||||| ||||||||||| ||||||||| ||||||||||||||||| || ||||||     
T  33055205 accatattagagggtgttatttctcgaacaattatttacgatgcagtacttaatcgaacaggtgaactgggctgttttatcctggaggc-gcacggttga 33055107  T
Q  364 tagtctaccttgcacaaacttgggtagtg 392  Q
    |||||||||||||||||||| ||||||||    
T  33055106 tagtctaccttgcacaaactcgggtagtg 33055078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 265 - 436
Target Start/End: Original strand, 8267758 - 8267930
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||||| |||| ||| | ||| ||||||||||  ||||||||||||||||||| |||||||  | |  ||||    
T  8267758 accatattagagggtgttatttctcgaacgattatttacagtgcaatacttaatcgaacatgtgaactgggttgttttatcttggaggc-acacaattgt 8267856  T
Q  364 tagtctaccttgcacaaacttgggtagtgtc-gtaaaacgtcttaaagagaacgacttgatcgtgacacaaccc 436  Q
    |||||||||||||||||||| || ||||||| || |||||||||||||| | |||| || ||||||| ||||||    
T  8267857 tagtctaccttgcacaaactcggatagtgtcggtgaaacgtcttaaagaaagcgacctggtcgtgactcaaccc 8267930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 10106204 - 10106099
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  10106204 ctgggttgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 10106106  T
Q  430 acaaccc 436  Q
     ||||||    
T  10106105 tcaaccc 10106099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 265 - 436
Target Start/End: Original strand, 41097880 - 41098051
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| |||| |||||||||||||||||| |  ||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||  | |||||||    
T  41097880 accatattagaggatgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggc-acacggttgt 41097978  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccc 436  Q
    |||||||||||||||||  | |||||||| ||| |   |||||||||| | |||| || ||||||| ||||||    
T  41097979 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 41098051  T

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Target: chr1; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 13890914 - 13890809
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |||| || |||||||    
T  13890914 ctgggctgttttatcctggagacggtgtggttgttagtctaccttgcac-aacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtgac 13890816  T
Q  430 acaaccc 436  Q
     ||||||    
T  13890815 tcaaccc 13890809  T

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Target: chr1; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 13893850 - 13893737
Alignment:
Q  209 cccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaacgattaaaccatatt-gagggtgttatttctcgaacgattacttacggtgt 307  Q
    ||||||||| | | ||||||||||||| ||||||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||||| |||| |||     
T  13893850 cccttcggtcttgtgtggtcttcgtac-atatagagtggtttaatcaaacaattaaaccatatttgagggtgttatttctcgaacgattatttacagtgc 13893752  T
Q  308 agtacctaatcgaac 322  Q
    || ||||||||||||    
T  13893751 agcacctaatcgaac 13893737  T

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Target: chr1; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 26651159 - 26651265
Alignment:
Q  329 actgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||  ||| || ||||||    
T  26651159 actgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtga 26651257  T
Q  429 cacaaccc 436  Q
    | ||||||    
T  26651258 ctcaaccc 26651265  T

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Target: chr1; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 336 - 436
Target Start/End: Complemental strand, 38734370 - 38734271
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||| ||  |||||||||||||||| |||| || ||||||| |||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 38734272  T

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Target: chr1; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 263 - 443
Target Start/End: Original strand, 11251040 - 11251219
Alignment:
Q  263 aaaccatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagtt-gaa-ctgggttgttttatcctggaggcggcgcggt 360  Q
    |||||||||||||| ||||||| ||||| ||||||||  | ||| |||   |||||| |||||| ||| ||||| ||||||||||||||| |||||||||    
T  11251040 aaaccatattgagg-tgttatt-ctcgagcgattactggcagtgcagtctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggt 11251137  T
Q  361 tgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaata 443  Q
    || ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || ||||||| || ||| ||||||    
T  11251138 tgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaata 11251219  T

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Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 4632855 - 4633032
Alignment:
Q  265 accatattgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgtt 364  Q
    ||||||| |||||||||||||||| ||| |||| ||||| || ||| | ||||||||||  |||||| || || |||||| |||||| | || | ||| |    
T  4632855 accatatcgagggtgttatttctcaaactattatttacgatgcagtgcgtaatcgaacaagtgaactagggtggtttatcatggaggagtcgtgattgat 4632954  T
Q  365 agtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaat 442  Q
    |  |||||||||||||| | || ||||| || ||||||||||||||||| |||| |  ||||||| ||||| ||||||    
T  4632955 aacctaccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaat 4633032  T

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Target: chr1; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 37404410 - 37404522
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  37404410 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 37404508  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  37404509 tcaccccggtaata 37404522  T

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Target: chr1; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 34318219 - 34318330
Alignment:
Q  331 tgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgaca 430  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| ||||||| |||||||     
T  34318219 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgact 34318317  T
Q  431 caacccagtaata 443  Q
    || ||| ||||||    
T  34318318 catcccggtaata 34318330  T

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Target: chr1; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 273 - 396
Target Start/End: Original strand, 33054347 - 33054471
Alignment:
Q  273 gagggtgttatttctcgaacgattacttacggtgtag--tacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtcta 370  Q
    |||| |||||||||||||||||||| |||||||| |   ||| ||||||||||| |||| |||  |||||||||| ||||| | | |||||| |||||||    
T  33054347 gaggctgttatttctcgaacgattatttacggtgcatgatacttaatcgaacaggtgaattggactgttttatcccggaggtg-cacggttgatagtcta 33054445  T
Q  371 ccttgcacaaacttgggtagtgtcgt 396  Q
    ||||||||||||| | ||||||||||    
T  33054446 ccttgcacaaactcgagtagtgtcgt 33054471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 39747159 - 39747264
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| || || ||||| ||||||||||||||| ||||||||||||| ||  |||||||||||||||| | || || |||||||    
T  39747159 ctgggctgttttatcctggagacgacgtggttgctagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtgac 39747257  T
Q  430 acaaccc 436  Q
     ||||||    
T  39747258 tcaaccc 39747264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 36684709 - 36684821
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  36684709 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 36684807  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  36684808 tcatcccggtaata 36684821  T

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Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 37409531 - 37409643
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||  ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  37409531 ctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 37409629  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  37409630 tcaccccggtaata 37409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 336 - 436
Target Start/End: Complemental strand, 14582194 - 14582095
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||| | ||||||||||||||||||||| |||| |||||||| ||  |||| ||||||||||| |||| ||||||| || |||||    
T  14582194 tgttttatcctggagacggtgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaactcaacc 14582096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 48246677 - 48246756
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaag 410  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||    
T  48246677 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaag 48246756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 5602425 - 5602530
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||| |||| ||||||||  |  |||||||||||||||| |||  || ||||||| |||||    
T  5602425 tgttttatcttggagacggcgtggttgttagtctaccttgcac-aactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 5602523  T
Q  436 cagtaat 442  Q
    | |||||    
T  5602524 cggtaat 5602530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 19799012 - 19799118
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  |||| ||||| |   |||||||||||||||| |||  |||||||||| ||||    
T  19799012 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaac 19799111  T
Q  435 ccagtaa 441  Q
    | |||||    
T  19799112 ctagtaa 19799118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 40166076 - 40165970
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||| |||||||||  ||||||||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  40166076 ttgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaac 40165977  T
Q  435 ccagtaa 441  Q
    | |||||    
T  40165976 ctagtaa 40165970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 3584702 - 3584590
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||  ||  |||||||||||||| | |||| || |||||||    
T  3584702 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgac 3584604  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  3584603 tcaccccggtaata 3584590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 5725074 - 5724982
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || |||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 5724982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 27716544 - 27716432
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| || ||| |||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  27716544 ctgggctgttttatcctggagacgacgctgttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 27716446  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  27716445 tcaccccggtaata 27716432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 428
Target Start/End: Original strand, 33301179 - 33301272
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   ||||||||||||||||||||| || ||||||    
T  33301179 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtga 33301272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 314 - 441
Target Start/End: Original strand, 23192794 - 23192922
Alignment:
Q  314 taatcgaacagttgaa-ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagag 412  Q
    |||||||||| ||| | |||| ||||||||||||||||| |||| ||||| |||||| ||||| ||||  ||||| |||| |   |||||||||||||||    
T  23192794 taatcgaacaattgtagctggcttgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagag 23192893  T
Q  413 aacgacttgatcgtgacacaacccagtaa 441  Q
    | |||| || ||||||| ||||| |||||    
T  23192894 agcgacctggtcgtgactcaacctagtaa 23192922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 335 - 443
Target Start/End: Original strand, 47451224 - 47451332
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||| ||||||||||| ||||| ||||||  |||||||||  || || |||| | | |||||||||||||||| |||| || ||||||| ||||    
T  47451224 ttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaac 47451323  T
Q  435 ccagtaata 443  Q
    | |||||||    
T  47451324 ctagtaata 47451332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 10135552 - 10135446
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||| ||||||||| ||||| | |||| ||||||||||  || ||||||| |   |||||||||||||||| |||| || ||||||| ||||    
T  10135552 ttgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 10135453  T
Q  435 ccagtaa 441  Q
    | |||||    
T  10135452 ctagtaa 10135446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 336 - 443
Target Start/End: Complemental strand, 5730200 - 5730094
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||| || || ||||||  ||  |||||||||||||| | |||| || ||||||| || ||    
T  5730200 tgttttatcctggagacggtgcggttgctagtctaccttgcac-aatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 5730102  T
Q  436 cagtaata 443  Q
    | ||||||    
T  5730101 cggtaata 5730094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 338 - 442
Target Start/End: Original strand, 19422876 - 19422983
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctacct----tgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaa 433  Q
    |||||||||||||  ||||  |||||||||||||||    ||||||| |||||||||||  |  |||||||||||||||| |||  |||||||||| |||    
T  19422876 ttttatcctggagatggcgtagttgttagtctacctaccttgcacaa-cttgggtagtgcagcgaaacgtcttaaagagagcgatctgatcgtgactcaa 19422974  T
Q  434 cccagtaat 442  Q
    |||||||||    
T  19422975 cccagtaat 19422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 10140185 - 10140079
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||| |||| |||| ||||| | |||| ||||||||||  ||| |||||| |   |||||| ||||||||| |||| |||||||||| ||||    
T  10140185 ttgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgactcaac 10140086  T
Q  435 ccagtaa 441  Q
    | |||||    
T  10140085 ctagtaa 10140079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 51041409 - 51041507
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    |||||||||||||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||| ||||||||||| ||||| |||||| ||||||||||    
T  51041409 ttctcgaacgattttctacagtgcagtaattaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaa 51041507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 27711388 - 27711325
Alignment:
Q  347 ggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  ||||||||||||||    
T  27711388 ggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaaga 27711325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 358 - 441
Target Start/End: Complemental strand, 3094187 - 3094104
Alignment:
Q  358 ggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
    ||||| |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| ||||| |||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 3094104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 434
Target Start/End: Original strand, 16649612 - 16649710
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||| |||||||||| ||||| ||||||| |||||||||  ||||  |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  16649612 ttgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtg-ccacaaacgtcttaaagagagcgacctggtcgtgactcaac 16649710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 11387841 - 11387902
Alignment:
Q  347 ggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaa 409  Q
    |||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  ||||||||||||    
T  11387841 ggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaa 11387902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 12260092 - 12259986
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||  || ||||| ||||| ||||||  |||||||||  ||||| ||||||   |||||||||||||||| |||| || ||||| | ||||    
T  12260092 ttgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctcaac 12259993  T
Q  435 ccagtaa 441  Q
    | |||||    
T  12259992 caagtaa 12259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 18784548 - 18784653
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||| |||||||||||| ||||| |||||| ||||||||||  || || |||| |   ||| |||||||| ||| |||| |||||||||| ||||    
T  18784548 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactcaac 18784646  T
Q  435 ccagtaa 441  Q
    | |||||    
T  18784647 ctagtaa 18784653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 26927721 - 26927827
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||  | ||||||||| ||||| |||||| ||||||||||  ||||| | || |   |||||||||||||||| ||||||  ||||||| ||||    
T  26927721 ttgttttattttagaggcggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacgtcttaaagagagcgacttagtcgtgactcaac 26927820  T
Q  435 ccagtaa 441  Q
    | |||||    
T  26927821 ctagtaa 26927827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 5e-31; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 15150485 - 15150311
Alignment:
Q  199 ctccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggtttagtcgaac----gattaaaccatatt-gagggtgttatttctcgaacg 293  Q
    |||||| |||||| ||| ||| ||||||| ||||||||||||||||||||||| | ||||    |||||||||||||| |||||| |||||| |||||||    
T  15150485 ctccttctgtcccgtcgtttttgagtggttttcgtaccatatagagtggtttaatggaactatcgattaaaccatatttgagggttttatttttcgaacg 15150386  T
Q  294 attacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtc 368  Q
    ||| |||||| || |||||  |||||||||  |||| |||| |||||||||||||||| | ||||||||||||||    
T  15150385 attgcttacgatgcagtacgcaatcgaacatgtgaattgggctgttttatcctggaggtgccgcggttgttagtc 15150311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 265 - 440
Target Start/End: Original strand, 34818627 - 34818802
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| ||||  ||||||||||| ||||||| |||||||||||||||||||  | || ||||    
T  34818627 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgagttgttttatcctggaggc-acacgattgt 34818725  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagta 440  Q
    |||||||||||||||||  | |||||||||||| |   |||||||||| | |||| || ||||||| ||||||||||    
T  34818726 tagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccagta 34818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 265 - 440
Target Start/End: Complemental strand, 37771878 - 37771703
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||| |||  |||  ||||||||||| |||||||||||||||||||||||||||  | |||||||    
T  37771878 accatattagagggtgttatttctcgaacgatcatatacagtgccgtatttaatcgaacaggtgaactgggttgttttatcctggaggc-acacggttgt 37771780  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagta 440  Q
    ||||||||||| |||||  | |||||||| ||| |   |||||||||| | |||| || ||||||| ||||||||||    
T  37771779 tagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccagta 37771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 19430115 - 19430004
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  19430115 ctgggctgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 19430017  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  19430016 tcaacccggtaat 19430004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 19435617 - 19435506
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  19435617 ctgggctgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 19435519  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  19435518 tcaacccggtaat 19435506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 19566264 - 19566153
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  19566264 ctgggctgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 19566166  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  19566165 tcaacccggtaat 19566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 19571766 - 19571655
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  19571766 ctgggctgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 19571668  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  19571667 tcaacccggtaat 19571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 330 - 429
Target Start/End: Original strand, 33616721 - 33616819
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  33616721 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 33616819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 31030629 - 31030524
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||  || |||||||||||||  |||||||||||||||| |||| || |||||||    
T  31030629 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgca-taatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtgac 31030531  T
Q  430 acaaccc 436  Q
     ||||||    
T  31030530 tcaaccc 31030524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 43999224 - 43999336
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| |||||| |||| ||||||||||||||| || || ||||||| ||  |||||| ||||||| |||||| ||||||||||    
T  43999224 ctgggctgttttatcctggagacggcgcagttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgttttaaagaaaacgacctgatcgtgac 43999322  T
Q  430 acaacccagtaata 443  Q
     |||||||||||||    
T  43999323 tcaacccagtaata 43999336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 284 - 441
Target Start/End: Original strand, 40125831 - 40125990
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||   ||||||| ||||  |||||||||||||| | ||||| |||||||||| ||||||||||| ||||| |||||| ||||||||||     
T  40125831 ttctcgaacgattttctacggtgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaat 40125930  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     ||||| |||| |   |||||||||||||||| |||  || ||||||| ||||| |||||    
T  40125931 tttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaa 40125990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 330 - 428
Target Start/End: Original strand, 21644075 - 21644172
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || ||||||    
T  21644075 ctgggctgttttatcctggagtcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21644172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 42514368 - 42514448
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  ||||||||||||||    
T  42514368 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaaga 42514448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 19166730 - 19166624
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| || |||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  19166730 ttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaac 19166631  T
Q  435 ccagtaa 441  Q
    | |||||    
T  19166630 ctagtaa 19166624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 31449865 - 31449971
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  31449865 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 31449964  T
Q  435 ccagtaa 441  Q
    | |||||    
T  31449965 ctagtaa 31449971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 44925922 - 44926028
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||| ||||||||| |||| || ||||||| ||||    
T  44925922 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaac 44926021  T
Q  435 ccagtaa 441  Q
    | |||||    
T  44926022 ctagtaa 44926028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 428
Target Start/End: Complemental strand, 13584453 - 13584354
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcaca-------aacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtga 428  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||       ||||||||||||| ||  |||||||||||||||| |||| || ||||||    
T  13584453 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 13584354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 17955783 - 17955895
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||| ||  |||||||||||| | | |||| || |||||||    
T  17955783 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgac 17955881  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  17955882 tcaccccggtaata 17955895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 411
Target Start/End: Complemental strand, 24884805 - 24884733
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  24884805 ttttatcctggagacggcgtggttgctagtctaccttgcac-aacttaggtagtgccgcaaaacgtcttaaaga 24884733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 32015801 - 32015689
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| |   |||||||||||||||| |||| || |||||||    
T  32015801 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 32015703  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  32015702 tcatcccggtaata 32015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 38182236 - 38182336
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| || ||| |||||||||| |||||| |||| |   |||||| ||||||||| |||| || ||||||| ||||    
T  38182236 ttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaac 38182335  T
Q  435 c 435  Q
    |    
T  38182336 c 38182336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 338 - 441
Target Start/End: Complemental strand, 1807565 - 1807462
Alignment:
Q  338 ttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaaccca 437  Q
    ||||||||| ||||||||| ||||| |||||| ||||||||||  ||||| ||||||   |||||||||||||||| |||| |  ||||||| ||||| |    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactcaaccta 1807466  T
Q  438 gtaa 441  Q
    ||||    
T  1807465 gtaa 1807462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 326 - 449
Target Start/End: Complemental strand, 33848124 - 33848002
Alignment:
Q  326 tgaactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcg 425  Q
    |||| |||||||||||||| | |||||| | | |||||| ||| |||||||||||||| |||||||| ||  |||| | || |||| ||| || ||||||    
T  33848124 tgaattgggttgttttatcgtagaggcgacactgttgttggtccaccttgcacaaactcgggtagtggcgcgaaacattttgaagaaaactacctgatcg 33848025  T
Q  426 tgacacaacccagtaatatcttcg 449  Q
    |||| |||||| ||||||||||||    
T  33848024 tgactcaaccc-gtaatatcttcg 33848002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 33416643 - 33416537
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||| ||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  33416643 ttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgactcaac 33416544  T
Q  435 ccagtaa 441  Q
    | |||||    
T  33416543 ctagtaa 33416537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 34118562 - 34118456
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||  ||||| || ||||| |||||| ||||||||||  ||||| |||| | | |||||||||||||||| |||| || ||||||| ||||    
T  34118562 ttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaac 34118463  T
Q  435 ccagtaa 441  Q
    | |||||    
T  34118462 ctagtaa 34118456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 43302717 - 43302762
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaa 380  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||    
T  43302717 ttgttttatcctggaggcggcgtggttgatagtctaccttgcacaa 43302762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 15875667 - 15875750
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgac 418  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   ||||||| |||||||| ||||    
T  15875667 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgac 15875750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 25367908 - 25367991
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctg 347  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| | ||  ||||||||||| |||||| || ||||||||||||    
T  25367908 accatattagagggtgttatttctcgaacgatcatatacggtgcaatatttaatcgaacaggtgaactaggctgttttatcctg 25367991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 17026031 - 17025925
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||||||| || | ||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  17026031 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 17025932  T
Q  435 ccagtaa 441  Q
    | |||||    
T  17025931 ctagtaa 17025925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 17556523 - 17556417
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    ||||||||||||||||||| || | ||| ||||||  |||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  17556523 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 17556424  T
Q  435 ccagtaa 441  Q
    | |||||    
T  17556423 ctagtaa 17556417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 18876366 - 18876471
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||||  ||||| |||| |   |||||||||||| ||| |||| || ||||||| ||||    
T  18876366 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaac 18876464  T
Q  435 ccagtaa 441  Q
    | |||||    
T  18876465 ctagtaa 18876471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 25367993 - 25368052
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgt 396  Q
    |||||||||||||||||  | ||||||||||||||||||||||||  | ||||||||||||    
T  25367993 tgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgtcgt 25368052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 36683675 - 36683592
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgac 418  Q
    |||||||||||||||||| ||| ||||| |||||| |||| |||||  ||||| |||| |   |||||||||||||||| ||||    
T  36683675 ttgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgac 36683592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 1910968 - 1911062
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||||||| |||||||| ||| ||||| |||||| | ||||||||  |||  ||||| |   |||||||||||||||| |||| ||||||||||    
T  1910968 ttgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 1911062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 24090723 - 24090617
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||| |||||||| || | ||| || ||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  24090723 ttgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 24090624  T
Q  435 ccagtaa 441  Q
    | |||||    
T  24090623 ctagtaa 24090617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 65; Significance: 5e-28; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 265 - 440
Target Start/End: Original strand, 1154 - 1329
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| ||||  ||||||||||| ||||||||| ||||||||| |||||||  | |||||||    
T  1154 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcttggaggc-acacggttgt 1252  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagta 440  Q
    |||||||||||||||||  | |||||||| ||| |   |||||||||| | |||| || ||||||| ||||||||||    
T  1253 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccagta 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 62; Significance: 3e-26; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 265 - 429
Target Start/End: Original strand, 52828 - 52992
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| ||||  |||||||||||  |||||||| |||||||||||||||||  | |||||||    
T  52828 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacagacgaactgggctgttttatcctggaggc-acacggttgt 52926  T
Q  364 tagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    |||||||||||||| ||  |||||||||||||| |   |||||||||| | |||| | ||||||||    
T  52927 tagtctaccttgcataattttgggtagtgtcgtgatttgtcttaaagaaagcgacctaatcgtgac 52992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 47785 - 47912
Alignment:
Q  265 accatatt-gagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgt 363  Q
    |||||||| ||||||||||||||||||||||| |  ||||||| ||||  |||||||||||  |||||||| ||||||||||| |||||  | |||||||    
T  47785 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggcgaactgggctgttttatccttgaggc-acacggttgt 47883  T
Q  364 tagtctaccttgcacaaacttgggtagtg 392  Q
    |||||||||||||||||  ||||||||||    
T  47884 tagtctaccttgcacaattttgggtagtg 47912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 37111 - 36999
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||| ||  |||||||||||||| | |||| || |||||||    
T  37111 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 37013  T
Q  430 acaacccagtaata 443  Q
     || ||||||||||    
T  37012 tcaccccagtaata 36999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 271 - 380
Target Start/End: Complemental strand, 45944 - 45836
Alignment:
Q  271 ttgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtcta 370  Q
    ||||||||||||||||||||||||| |  ||||||| ||||  |||| |||||| ||||||||| |||||||||||||||||  | ||||||||||||||    
T  45944 ttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtgaactgggctgttttatcctggaggc-acacggttgttagtcta 45846  T
Q  371 ccttgcacaa 380  Q
    ||||||||||    
T  45845 ccttgcacaa 45836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 271 - 380
Target Start/End: Original strand, 152843 - 152951
Alignment:
Q  271 ttgagggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttgaactgggttgttttatcctggaggcggcgcggttgttagtcta 370  Q
    ||||||||||||||||||||||||| |  ||||||| ||||  |||| |||||| ||||||||| |||||||||||||||||  | ||||||||||||||    
T  152843 ttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtgaactgggctgttttatcctggaggc-acacggttgttagtcta 152941  T
Q  371 ccttgcacaa 380  Q
    ||||||||||    
T  152942 ccttgcacaa 152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 2766 - 2877
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||   |||||||||||||||  |||| || |||||||    
T  2766 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 2864  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  2865 tcaacccggtaat 2877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 10726 - 10837
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||   |||||||||||||||  |||| || |||||||    
T  10726 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 10824  T
Q  430 acaacccagtaat 442  Q
     |||||| |||||    
T  10825 tcaacccggtaat 10837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 336 - 436
Target Start/End: Complemental strand, 7141 - 7042
Alignment:
Q  336 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacc 435  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||||||| || |||| || |||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaactcaacc 7043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 1666 - 1568
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||| || |||||||    
T  1666 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 231 - 436
Target Start/End: Original strand, 33861 - 34068
Alignment:
Q  231 cgtaccatatagagtggttt-agtcgaacgattaaaccatattgag--ggtgttatttctcgaacgattacttacggtgtagtacctaatcgaacagttg 327  Q
    |||||||||| ||||||||| | |||||||||||| |||||||     |||||   ||||||||| ||||| ||  ||| ||||| |||| ||| ||| |    
T  33861 cgtaccatattgagtggttttaatcgaacgattaagccatattttttaggtgtatattctcgaacaattacatattgtgcagtacgtaattgaaaagt-g 33959  T
Q  328 aactgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtg 427  Q
    | || ||||||||||||||| ||| || |||||||||| ||||||||| |||||||| ||||||| ||  |||||||||||||||| |||| || |||||    
T  33960 atctaggttgttttatcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 34059  T
Q  428 acacaaccc 436  Q
    || ||||||    
T  34060 actcaaccc 34068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 314 - 441
Target Start/End: Original strand, 9863 - 9992
Alignment:
Q  314 taatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaaga 411  Q
    |||||||||||||| | ||||| |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   ||||||||||||||    
T  9863 taatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaaga 9962  T
Q  412 gaacgacttgatcgtgacacaacccagtaa 441  Q
    || |||| || ||||||| ||||| |||||    
T  9963 gagcgacctggtcgtgactcaacctagtaa 9992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 31646 - 31534
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  31646 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 31548  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  31547 tcaccccggtaata 31534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 26473 - 26362
Alignment:
Q  331 tgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgaca 430  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||||||||||| ||     
T  26473 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacttgatcgtaact 26375  T
Q  431 caacccagtaata 443  Q
    || ||| ||||||    
T  26374 catcccggtaata 26362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 13734 - 13845
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  13734 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 13832  T
Q  430 acaacccagtaat 442  Q
     || ||| |||||    
T  13833 tcaccccggtaat 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 449
Target Start/End: Original strand, 19189 - 19310
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgc---ggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgt 426  Q
    ||||| ||||||||||||||| ||||||   ||||| ||||||||||||||||| ||| ||||||| ||  |||||||||||||| | |||| || ||||    
T  19189 ctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgt 19287  T
Q  427 gacacaacccagtaatatcttcg 449  Q
    ||| || ||||||||||| ||||    
T  19288 gactcaccccagtaatattttcg 19310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 284 - 441
Target Start/End: Complemental strand, 4223 - 4064
Alignment:
Q  284 ttctcgaacgattacttacggtgtagtacctaatcgaacagttgaa-ctggg-ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaa 381  Q
    |||||||||||||   ||| ||| ||||  |||||||||||||| | ||||| |||||||||||||||||||||| ||||| |||||| ||||||||||     
T  4223 ttctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaat 4124  T
Q  382 cttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaacccagtaa 441  Q
     ||||| |||| |   ||| |||||||||||| |||| || ||||||| ||||| |||||    
T  4123 tttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaa 4064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 7200 - 7094
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| |   |||||||||||||||| |||| || ||||||| ||||    
T  7200 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 7101  T
Q  435 ccagtaa 441  Q
    | |||||    
T  7100 ctagtaa 7094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 9202 - 9314
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| |||||| |||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  9202 ctgggctgttttatcctggagacggcgcggttgctagtcttccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 9300  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  9301 tcaccccggtaata 9314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 3664 - 3552
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||  ||||||||||| ||||||||||||||| ||||| ||||||| ||  |||||||||||||| | |||| || |||||||    
T  3664 ctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 3566  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  3565 tcaccccggtaata 3552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 3159 - 3047
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  3159 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 3061  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  3060 tcatcccggtaata 3047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 81376 - 81488
Alignment:
Q  330 ctgggttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgac 429  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| ||  |||||||||||||||| |||| || |||||||    
T  81376 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 81474  T
Q  430 acaacccagtaata 443  Q
     || ||| ||||||    
T  81475 tcatcccggtaata 81488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 83162 - 83056
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||  ||||| |||||| ||||||| ||  |||||| |||||   |||||||||||||||| |||| || ||||||| ||||    
T  83162 ttgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactcaac 83063  T
Q  435 ccagtaa 441  Q
    | |||||    
T  83062 ctagtaa 83056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 35730 - 35652
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagaga 413  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||  ||||  ||||||   ||||||||||||||||    
T  35730 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagaga 35652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 70466 - 70519
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggttta 251  Q
    |||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  70466 actcgttatgtccctttggttttgagtggtcttcataccatatagagtggttta 70519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 71679 - 71626
Alignment:
Q  198 actccttatgtcccttcggtttcgagtggtcttcgtaccatatagagtggttta 251  Q
    ||||||| |||||||| | ||| ||| ||||||||||||||||| |||||||||    
T  71679 actccttctgtccctttgattttgagcggtcttcgtaccatatacagtggttta 71626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 335 - 440
Target Start/End: Original strand, 166085 - 166190
Alignment:
Q  335 ttgttttatcctggaggcggcgcggttgttagtctaccttgcacaaacttgggtagtgtcgtaaaacgtcttaaagagaacgacttgatcgtgacacaac 434  Q
    |||||||||||||||||||||| ||||| |||| |  |||||||||  || || |||| |   |||||||||||||||| |||| || | ||||| ||||    
T  166085 ttgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaac 166184  T
Q  435 ccagta 440  Q
    | ||||    
T  166185 ctagta 166190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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