View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4492-Insertion-3 (Length: 866)

Name: NF4492-Insertion-3
Description: NF4492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4492-Insertion-3
NF4492-Insertion-3
[»] chr3 (63 HSPs)
chr3 (7-248)||(49784831-49785072)
chr3 (602-751)||(8541285-8541434)
chr3 (433-580)||(8541285-8541432)
chr3 (755-866)||(49784727-49784838)
chr3 (466-580)||(47278053-47278167)
chr3 (597-752)||(47278050-47278205)
chr3 (126-248)||(1302041-1302162)
chr3 (127-248)||(6852750-6852870)
chr3 (127-248)||(10584656-10584776)
chr3 (128-248)||(8465036-8465155)
chr3 (130-248)||(4050094-4050211)
chr3 (130-248)||(4055228-4055345)
chr3 (130-248)||(5481289-5481406)
chr3 (130-248)||(6857856-6857973)
chr3 (130-248)||(10672739-10672856)
chr3 (130-248)||(10677852-10677969)
chr3 (127-248)||(33702397-33702517)
chr3 (132-248)||(20891434-20891550)
chr3 (134-248)||(10591100-10591213)
chr3 (130-248)||(31081308-31081425)
chr3 (130-248)||(31076201-31076320)
chr3 (244-422)||(47278235-47278413)
chr3 (130-224)||(8458621-8458715)
chr3 (130-224)||(269486-269580)
chr3 (127-248)||(5457814-5457929)
chr3 (249-350)||(8541097-8541199)
chr3 (652-751)||(50769955-50770054)
chr3 (759-866)||(29827644-29827751)
chr3 (483-580)||(50769957-50770054)
chr3 (755-830)||(1302155-1302230)
chr3 (755-830)||(4050026-4050101)
chr3 (755-830)||(4055160-4055235)
chr3 (755-830)||(5481399-5481474)
chr3 (755-830)||(10672849-10672924)
chr3 (755-830)||(10677962-10678037)
chr3 (755-830)||(31076313-31076388)
chr3 (755-830)||(31081418-31081493)
chr3 (755-830)||(5457922-5457997)
chr3 (755-830)||(6852863-6852938)
chr3 (755-830)||(6857966-6858041)
chr3 (755-830)||(10584769-10584844)
chr3 (755-830)||(10591206-10591281)
chr3 (755-830)||(33702510-33702585)
chr3 (758-830)||(8458530-8458602)
chr3 (657-753)||(27813719-27813815)
chr3 (129-248)||(3187245-3187364)
chr3 (755-830)||(8464968-8465043)
chr3 (173-242)||(18023978-18024047)
chr3 (488-580)||(27813719-27813811)
chr3 (130-186)||(29827829-29827885)
chr3 (130-181)||(18023914-18023965)
chr3 (759-830)||(29827621-29827692)
chr3 (759-830)||(49784704-49784775)
chr3 (782-830)||(20891354-20891402)
chr3 (178-233)||(18023390-18023445)
chr3 (771-830)||(20891281-20891340)
chr3 (788-866)||(29827703-29827781)
chr3 (694-754)||(19466133-19466193)
chr3 (249-290)||(27813512-27813554)
chr3 (685-755)||(47648995-47649065)
chr3 (685-754)||(4221355-4221424)
chr3 (773-830)||(18023468-18023525)
chr3 (805-862)||(49784790-49784847)
[»] chr2 (36 HSPs)
chr2 (249-580)||(7497030-7497375)
chr2 (130-248)||(17720327-17720444)
chr2 (635-726)||(7497264-7497354)
chr2 (130-248)||(14917183-14917300)
chr2 (128-248)||(30283249-30283368)
chr2 (130-248)||(17720000-17720117)
chr2 (130-248)||(39178885-39179002)
chr2 (130-248)||(45120673-45120790)
chr2 (652-751)||(26823103-26823202)
chr2 (760-866)||(20892207-20892313)
chr2 (483-580)||(26823103-26823200)
chr2 (755-830)||(14917293-14917368)
chr2 (755-830)||(30283361-30283436)
chr2 (755-830)||(45120605-45120680)
chr2 (652-754)||(43822599-43822701)
chr2 (483-580)||(43822604-43822701)
chr2 (759-855)||(716506-716602)
chr2 (755-830)||(17720437-17720512)
chr2 (645-754)||(13284041-13284150)
chr2 (799-858)||(42780422-42780481)
chr2 (130-184)||(42780542-42780596)
chr2 (758-814)||(20892264-20892320)
chr2 (758-830)||(42780391-42780463)
chr2 (249-318)||(43822900-43822970)
chr2 (755-800)||(39178847-39178892)
chr2 (692-756)||(2641977-2642040)
chr2 (476-558)||(13284068-13284150)
chr2 (166-212)||(42780494-42780540)
chr2 (254-322)||(13284264-13284333)
chr2 (166-215)||(20892154-20892203)
chr2 (645-754)||(32164634-32164743)
chr2 (678-754)||(4580554-4580630)
chr2 (129-212)||(716634-716716)
chr2 (652-754)||(13764839-13764941)
chr2 (249-322)||(32164923-32164996)
chr2 (698-755)||(40934652-40934709)
[»] scaffold0648 (3 HSPs)
scaffold0648 (442-580)||(4378-4516)
scaffold0648 (597-754)||(4373-4530)
scaffold0648 (249-367)||(4531-4650)
[»] scaffold0274 (3 HSPs)
scaffold0274 (442-580)||(3848-3986)
scaffold0274 (597-754)||(3843-4000)
scaffold0274 (249-367)||(4001-4120)
[»] chr4 (79 HSPs)
chr4 (442-580)||(31835470-31835608)
chr4 (597-754)||(31835465-31835622)
chr4 (130-246)||(32429034-32429150)
chr4 (606-754)||(16207203-16207351)
chr4 (442-580)||(16207208-16207346)
chr4 (130-248)||(3424114-3424231)
chr4 (130-248)||(35091201-35091318)
chr4 (249-422)||(31835654-31835820)
chr4 (128-248)||(35096314-35096433)
chr4 (759-866)||(25618163-25618270)
chr4 (755-866)||(32429145-32429256)
chr4 (244-422)||(35187515-35187694)
chr4 (755-866)||(3409460-3409571)
chr4 (672-754)||(27993623-27993705)
chr4 (249-358)||(16204740-16204850)
chr4 (755-844)||(18716743-18716832)
chr4 (466-580)||(35187337-35187446)
chr4 (755-838)||(18671099-18671182)
chr4 (597-761)||(35187325-35187484)
chr4 (755-844)||(18737416-18737505)
chr4 (503-580)||(27993628-27993705)
chr4 (657-756)||(22910775-22910874)
chr4 (657-756)||(22967648-22967747)
chr4 (174-248)||(3409393-3409467)
chr4 (755-861)||(3424224-3424330)
chr4 (166-248)||(18716825-18716907)
chr4 (166-248)||(18737498-18737580)
chr4 (488-580)||(22910782-22910874)
chr4 (488-580)||(22967648-22967740)
chr4 (249-344)||(27993699-27993795)
chr4 (788-866)||(47071632-47071710)
chr4 (788-866)||(54859062-54859140)
chr4 (130-203)||(34279254-34279327)
chr4 (139-212)||(54858987-54859060)
chr4 (755-830)||(35091133-35091208)
chr4 (755-830)||(35096246-35096321)
chr4 (759-861)||(34279369-34279471)
chr4 (788-855)||(14643630-14643697)
chr4 (354-429)||(16207096-16207171)
chr4 (181-248)||(18671175-18671242)
chr4 (130-187)||(22119073-22119130)
chr4 (758-830)||(3409522-3409594)
chr4 (130-186)||(14643526-14643582)
chr4 (758-830)||(18716698-18716770)
chr4 (758-830)||(18737371-18737443)
chr4 (130-186)||(47071758-47071814)
chr4 (758-830)||(54859091-54859163)
chr4 (130-212)||(34128122-34128205)
chr4 (788-866)||(34279339-34279417)
chr4 (657-727)||(42841724-42841794)
chr4 (488-565)||(42841717-42841794)
chr4 (251-322)||(8823590-8823662)
chr4 (758-830)||(47071609-47071681)
chr4 (788-866)||(22118948-22119026)
chr4 (128-186)||(34601823-34601881)
chr4 (759-816)||(30019763-30019820)
chr4 (758-830)||(14643659-14643731)
chr4 (758-830)||(18671048-18671120)
chr4 (128-188)||(25618048-25618108)
chr4 (758-830)||(32429207-32429279)
chr4 (130-177)||(3409329-3409376)
chr4 (759-830)||(22118925-22118996)
chr4 (783-866)||(25618128-25618211)
chr4 (166-212)||(14643582-14643628)
chr4 (166-212)||(30019692-30019738)
chr4 (249-320)||(42841995-42842065)
chr4 (652-725)||(45071265-45071338)
chr4 (758-830)||(25618221-25618293)
chr4 (798-866)||(30019743-30019811)
chr4 (758-830)||(34279427-34279499)
chr4 (128-186)||(30019636-30019692)
chr4 (134-172)||(18716920-18716958)
chr4 (134-172)||(18737596-18737634)
chr4 (652-753)||(19090449-19090550)
chr4 (252-290)||(45071008-45071046)
chr4 (166-212)||(47071712-47071758)
chr4 (684-725)||(5232311-5232352)
chr4 (805-866)||(32429136-32429197)
chr4 (483-556)||(45071265-45071338)
[»] chr8 (41 HSPs)
chr8 (609-754)||(8643254-8643399)
chr8 (440-580)||(8643259-8643399)
chr8 (130-248)||(18493978-18494095)
chr8 (130-248)||(14318416-14318533)
chr8 (130-248)||(26981676-26981793)
chr8 (130-248)||(26986790-26986907)
chr8 (130-248)||(34108517-34108634)
chr8 (130-248)||(14314712-14314829)
chr8 (166-248)||(10340754-10340836)
chr8 (652-754)||(19922231-19922335)
chr8 (755-830)||(14314822-14314897)
chr8 (755-830)||(14318526-14318601)
chr8 (755-830)||(18494088-18494163)
chr8 (755-830)||(26986900-26986975)
chr8 (755-830)||(34108449-34108524)
chr8 (755-830)||(26981786-26981861)
chr8 (652-754)||(39580590-39580692)
chr8 (129-211)||(43956650-43956732)
chr8 (249-310)||(39582061-39582122)
chr8 (758-830)||(10340881-10340953)
chr8 (762-830)||(18608568-18608636)
chr8 (483-547)||(19922271-19922335)
chr8 (758-830)||(43956764-43956836)
chr8 (788-866)||(18608535-18608613)
chr8 (483-580)||(39580595-39580692)
chr8 (755-866)||(10340829-10340930)
chr8 (760-816)||(25953090-25953147)
chr8 (638-719)||(40308468-40308549)
chr8 (670-754)||(412195-412279)
chr8 (129-177)||(10340697-10340745)
chr8 (249-328)||(37044968-37045048)
chr8 (758-830)||(1782036-1782105)
chr8 (165-203)||(18608487-18608525)
chr8 (469-547)||(40308471-40308549)
chr8 (133-177)||(18608435-18608479)
chr8 (759-866)||(25953030-25953138)
chr8 (695-754)||(5572543-5572602)
chr8 (695-753)||(24887989-24888047)
chr8 (501-538)||(412242-412279)
chr8 (253-290)||(19779884-19779921)
chr8 (684-729)||(42446708-42446753)
[»] chr6 (39 HSPs)
chr6 (439-578)||(29968422-29968561)
chr6 (605-747)||(29968422-29968564)
chr6 (250-422)||(29968603-29968777)
chr6 (130-248)||(21276059-21276176)
chr6 (131-215)||(11182989-11183073)
chr6 (759-866)||(24508716-24508823)
chr6 (755-830)||(21275991-21276066)
chr6 (130-186)||(21936408-21936464)
chr6 (759-866)||(21937807-21937914)
chr6 (652-727)||(32218117-32218192)
chr6 (483-560)||(32218115-32218192)
chr6 (759-830)||(20752053-20752124)
chr6 (759-866)||(21936542-21936649)
chr6 (759-830)||(21937784-21937855)
chr6 (759-830)||(24508775-24508846)
chr6 (652-727)||(34884329-34884404)
chr6 (132-186)||(12909621-12909675)
chr6 (132-186)||(12934728-12934782)
chr6 (249-317)||(19292934-19293003)
chr6 (130-215)||(21937943-21938028)
chr6 (483-560)||(34884327-34884404)
chr6 (759-866)||(20751994-20752101)
chr6 (764-830)||(21936606-21936672)
chr6 (130-203)||(20751881-20751953)
chr6 (784-844)||(11183068-11183128)
chr6 (652-754)||(19292649-19292751)
chr6 (483-580)||(19292654-19292751)
chr6 (788-861)||(21936512-21936585)
chr6 (652-756)||(3419172-3419276)
chr6 (652-755)||(19078683-19078784)
chr6 (695-754)||(30590215-30590274)
chr6 (166-212)||(12909575-12909621)
chr6 (166-212)||(12934682-12934728)
chr6 (248-329)||(19079193-19079274)
chr6 (249-317)||(3418990-3419059)
chr6 (250-324)||(10172510-10172586)
chr6 (761-830)||(11183104-11183173)
chr6 (758-830)||(24509918-24509993)
chr6 (758-839)||(24509971-24510051)
[»] chr1 (64 HSPs)
chr1 (129-244)||(43359091-43359206)
chr1 (130-248)||(28598595-28598712)
chr1 (477-580)||(25160460-25160563)
chr1 (130-248)||(28574583-28574700)
chr1 (646-755)||(25160454-25160563)
chr1 (755-866)||(43358984-43359094)
chr1 (129-248)||(3468354-3468472)
chr1 (761-844)||(10185893-10185976)
chr1 (759-866)||(10186437-10186544)
chr1 (759-866)||(21431537-21431644)
chr1 (780-866)||(16051426-16051512)
chr1 (130-203)||(16051515-16051588)
chr1 (755-830)||(3468286-3468361)
chr1 (759-830)||(16051403-16051474)
chr1 (755-830)||(28574515-28574590)
chr1 (755-830)||(28598527-28598602)
chr1 (160-242)||(3701295-3701377)
chr1 (166-242)||(17414359-17414435)
chr1 (249-324)||(25160634-25160709)
chr1 (784-866)||(1188052-1188134)
chr1 (168-242)||(3696169-3696243)
chr1 (244-324)||(43671419-43671499)
chr1 (758-830)||(21431595-21431667)
chr1 (651-754)||(39864680-39864784)
chr1 (758-830)||(43358961-43359033)
chr1 (759-830)||(1188029-1188100)
chr1 (131-186)||(17414304-17414359)
chr1 (759-830)||(19311031-19311102)
chr1 (482-580)||(39864680-39864779)
chr1 (132-186)||(13654676-13654730)
chr1 (788-866)||(19311054-19311132)
chr1 (132-186)||(35653036-35653090)
chr1 (130-186)||(1188333-1188389)
chr1 (759-830)||(10186496-10186567)
chr1 (653-727)||(4198463-4198537)
chr1 (136-186)||(19311180-19311230)
chr1 (252-317)||(4198205-4198270)
chr1 (130-187)||(21430777-21430833)
chr1 (763-828)||(35653172-35653237)
chr1 (249-317)||(16632295-16632368)
chr1 (761-861)||(35626366-35626465)
chr1 (166-210)||(35653090-35653134)
chr1 (653-725)||(36565603-36565675)
chr1 (784-855)||(1188218-1188289)
chr1 (759-830)||(13654527-13654598)
chr1 (248-318)||(46671518-46671589)
chr1 (484-558)||(4198463-4198537)
chr1 (166-212)||(19311134-19311180)
chr1 (693-755)||(47476551-47476613)
chr1 (166-215)||(1188129-1188178)
chr1 (141-186)||(10186056-10186101)
chr1 (270-323)||(39864443-39864496)
chr1 (484-556)||(36565603-36565675)
chr1 (678-754)||(50432559-50432635)
chr1 (143-186)||(1188178-1188221)
chr1 (129-184)||(3696110-3696165)
chr1 (695-754)||(3712798-3712857)
chr1 (172-203)||(44523933-44523964)
chr1 (792-866)||(10185930-10186004)
chr1 (166-208)||(10186359-10186401)
chr1 (695-756)||(49915798-49915857)
chr1 (677-754)||(16632109-16632186)
chr1 (697-754)||(25244867-25244924)
chr1 (249-317)||(36565778-36565847)
[»] chr7 (40 HSPs)
chr7 (130-248)||(26056420-26056537)
chr7 (130-248)||(26065779-26065896)
chr7 (130-248)||(12857075-12857192)
chr7 (130-248)||(26051307-26051424)
chr7 (130-248)||(26060666-26060783)
chr7 (130-248)||(12851962-12852079)
chr7 (463-580)||(4038501-4038618)
chr7 (164-248)||(14610615-14610698)
chr7 (755-830)||(12851894-12851969)
chr7 (755-830)||(12857007-12857082)
chr7 (755-830)||(14610547-14610622)
chr7 (755-830)||(26051239-26051314)
chr7 (755-830)||(26056352-26056427)
chr7 (755-830)||(26060598-26060673)
chr7 (755-830)||(26065711-26065786)
chr7 (632-754)||(4038501-4038623)
chr7 (489-580)||(23328915-23329006)
chr7 (658-751)||(23328915-23329008)
chr7 (652-753)||(49016809-49016910)
chr7 (130-186)||(2248853-2248909)
chr7 (483-579)||(49016814-49016910)
chr7 (248-328)||(49017022-49017104)
chr7 (761-830)||(5440217-5440286)
chr7 (761-830)||(5449227-5449296)
chr7 (249-328)||(44970071-44970151)
chr7 (130-184)||(4181276-4181330)
chr7 (255-324)||(23328648-23328718)
chr7 (674-727)||(11907589-11907642)
chr7 (678-754)||(12467574-12467650)
chr7 (652-724)||(17756831-17756903)
chr7 (249-328)||(27400248-27400327)
chr7 (249-328)||(11907738-11907820)
chr7 (249-322)||(21809295-21809368)
chr7 (684-754)||(30682584-30682654)
chr7 (804-866)||(35352221-35352283)
chr7 (249-317)||(1076071-1076140)
chr7 (249-309)||(4038363-4038424)
chr7 (505-558)||(11907589-11907642)
chr7 (483-560)||(17756831-17756908)
chr7 (685-754)||(21267826-21267895)
[»] chr5 (47 HSPs)
chr5 (130-248)||(9872225-9872342)
chr5 (130-248)||(9877340-9877457)
chr5 (130-248)||(39904131-39904248)
chr5 (755-866)||(2023194-2023305)
chr5 (130-248)||(39909244-39909361)
chr5 (130-212)||(13556105-13556187)
chr5 (130-186)||(43540564-43540620)
chr5 (755-830)||(9872335-9872410)
chr5 (755-830)||(9877450-9877525)
chr5 (135-210)||(24091794-24091869)
chr5 (759-850)||(35368757-35368848)
chr5 (755-830)||(39909176-39909251)
chr5 (652-755)||(4428673-4428776)
chr5 (759-830)||(13556219-13556290)
chr5 (755-830)||(39904063-39904138)
chr5 (652-754)||(20645585-20645687)
chr5 (166-223)||(2024354-2024411)
chr5 (483-560)||(4428699-4428776)
chr5 (249-317)||(37022969-37023038)
chr5 (130-177)||(2024420-2024467)
chr5 (250-324)||(14028295-14028370)
chr5 (633-724)||(16967126-16967217)
chr5 (684-754)||(37022786-37022856)
chr5 (483-580)||(20645590-20645687)
chr5 (758-830)||(2023171-2023243)
chr5 (464-560)||(16967121-16967217)
chr5 (162-206)||(43401906-43401950)
chr5 (130-181)||(4555967-4556018)
chr5 (759-830)||(35368816-35368887)
chr5 (758-865)||(43379625-43379732)
chr5 (274-324)||(28480713-28480763)
chr5 (760-830)||(43540699-43540768)
chr5 (249-317)||(4428886-4428955)
chr5 (694-755)||(19645457-19645518)
chr5 (249-324)||(20645836-20645910)
chr5 (698-758)||(2866760-2866820)
chr5 (168-248)||(4555880-4555960)
chr5 (694-754)||(16717204-16717264)
chr5 (788-844)||(43540668-43540724)
chr5 (128-187)||(35368621-35368680)
chr5 (759-830)||(43379601-43379672)
chr5 (788-866)||(13556189-13556267)
chr5 (788-866)||(35368727-35368805)
chr5 (166-212)||(43540620-43540666)
chr5 (215-248)||(2023298-2023331)
chr5 (665-730)||(14028045-14028110)
chr5 (515-580)||(37022791-37022856)
[»] scaffold0223 (2 HSPs)
scaffold0223 (130-248)||(1820-1937)
scaffold0223 (755-830)||(1930-2005)
[»] scaffold0006 (5 HSPs)
scaffold0006 (652-754)||(230547-230649)
scaffold0006 (132-186)||(144437-144491)
scaffold0006 (483-580)||(230547-230644)
scaffold0006 (249-317)||(230291-230359)
scaffold0006 (759-830)||(144288-144359)
[»] scaffold0005 (4 HSPs)
scaffold0005 (788-855)||(173595-173662)
scaffold0005 (130-186)||(173710-173766)
scaffold0005 (758-830)||(173561-173633)
scaffold0005 (166-212)||(173664-173710)
[»] scaffold0542 (2 HSPs)
scaffold0542 (694-755)||(9678-9739)
scaffold0542 (525-558)||(9706-9739)
[»] scaffold0097 (1 HSPs)
scaffold0097 (645-755)||(47228-47338)


Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-114; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 7 - 248
Target Start/End: Complemental strand, 49785072 - 49784831
Alignment:
Q  7 accagcaactgtgaaacaatgttcatttgtttctcggcatattcacgcaacatataagaaagagatcattgtcggacgtaaaagttgatcgacatatcat 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  49785072 accagcaactgtgaaacaatgttcatttgtttctcgtcatattcacgcaacatataagaaagagatcattgtcggatgtaaaagttgatctacatatcat 49784973  T
Q  107 cttatgagtttctatgagtattatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatat 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||    
T  49784972 cttatgagtttctatgagtattatgttggtgatttccaaaataatagaatcactttaaaaccaaaagttgtaactcttcatggaaatcattcatatacat 49784873  T
Q  207 tggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  49784872 tggaacattattatttattgatagataatgaaccatgacatt 49784831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 602 - 751
Target Start/End: Original strand, 8541285 - 8541434
Alignment:
Q  602 tcctagcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatat 701  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  8541285 tcctagcaggaattgaaccggggtcctgtaagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatgttgtttaaaacggtttaatat 8541384  T
Q  702 atattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    ||||||||||||||||||| |||||| | ||||||| |||||||||||||    
T  8541385 atattccacaaatatttggtaccccctagaaatgatatcaagatccgcca 8541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 433 - 580
Target Start/End: Original strand, 8541285 - 8541432
Alignment:
Q  433 tcctaacaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatat 532  Q
    ||||| ||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  8541285 tcctagcaggaattgaaccggggtcctgtaagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatgttgtttaaaacggtttaatat 8541384  T
Q  533 atattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  8541385 atattccacaaatatttggtaccccctagaaatgatatcaagatccgc 8541432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 755 - 866
Target Start/End: Complemental strand, 49784838 - 49784727
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaa 854  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  49784838 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcataataaaccatatcattgattcaagtgtatatgatcataagctttggcaa 49784739  T
Q  855 atgggtgcttaa 866  Q
    ||||||||||||    
T  49784738 atgggtgcttaa 49784727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 466 - 580
Target Start/End: Complemental strand, 47278167 - 47278053
Alignment:
Q  466 taaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaat 565  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47278167 taaaatcaaacatttgcaccaccacactagtatacaacattgtataatgtttgaaacgttttaatatatattccacaaatatttggcacccccgagaaat 47278068  T
Q  566 gatatcaagatccgc 580  Q
    | |||||||||||||    
T  47278067 ggtatcaagatccgc 47278053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 597 - 752
Target Start/End: Complemental strand, 47278205 - 47278050
Alignment:
Q  597 aaagatcctagcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgtttt 696  Q
    |||| |||||||| ||||  ||||||| || | | || ||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||    
T  47278205 aaagctcctagcaagaatcaaaccggcatcctttaagataaaatcaaacatttgcaccaccacactagtatacaacattgtataatgtttgaaacgtttt 47278106  T
Q  697 aatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccac 752  Q
    ||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||    
T  47278105 aatatatattccacaaatatttggcacccccgagaaatggtatcaagatccgccac 47278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 1302041 - 1302162
Alignment:
Q  126 attatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatc 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  1302041 attatgttggtaatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatatattggaacattattatttat- 1302139  T
Q  226 gatagataatgaaccatgacatt 248  Q
     ||  ||||||||||||||||||    
T  1302140 tattaataatgaaccatgacatt 1302162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 127 - 248
Target Start/End: Original strand, 6852750 - 6852870
Alignment:
Q  127 ttatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcg 226  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||      
T  6852750 ttatgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-t 6852848  T
Q  227 atagataatgaaccatgacatt 248  Q
    ||  ||||||||||||||||||    
T  6852849 attaataatgaaccatgacatt 6852870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 127 - 248
Target Start/End: Original strand, 10584656 - 10584776
Alignment:
Q  127 ttatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcg 226  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||      
T  10584656 ttatgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-t 10584754  T
Q  227 atagataatgaaccatgacatt 248  Q
    ||  ||||||||||||||||||    
T  10584755 attaataatgaaccatgacatt 10584776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 128 - 248
Target Start/End: Complemental strand, 8465155 - 8465036
Alignment:
Q  128 tatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcga 227  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  |    
T  8465155 tatgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-ta 8465057  T
Q  228 tagataatgaaccatgacatt 248  Q
    |  ||||||||||||||||||    
T  8465056 ttaataatgaaccatgacatt 8465036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 4050211 - 4050094
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  4050211 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 4050113  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  4050112 aataatgaaccatgacatt 4050094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 4055345 - 4055228
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  4055345 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 4055247  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  4055246 aataatgaaccatgacatt 4055228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 5481289 - 5481406
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  5481289 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 5481387  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  5481388 aataatgaaccatgacatt 5481406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 6857856 - 6857973
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  6857856 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 6857954  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  6857955 aataatgaaccatgacatt 6857973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 10672739 - 10672856
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  10672739 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 10672837  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  10672838 aataatgaaccatgacatt 10672856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 10677852 - 10677969
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  10677852 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 10677950  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  10677951 aataatgaaccatgacatt 10677969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 127 - 248
Target Start/End: Original strand, 33702397 - 33702517
Alignment:
Q  127 ttatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcg 226  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||      
T  33702397 ttatgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacataggaacattattatttat-t 33702495  T
Q  227 atagataatgaaccatgacatt 248  Q
    ||  ||||||||||||||||||    
T  33702496 attaataatgaaccatgacatt 33702517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 20891550 - 20891434
Alignment:
Q  132 ttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgataga 231  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| || |||||||||||  ||||||    
T  20891550 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgagaatcattcatatacattgaaaaattattatttactgataga 20891451  T
Q  232 taatgaaccatgacatt 248  Q
    ||||||||||| |||||    
T  20891450 taatgaaccataacatt 20891434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 10591100 - 10591213
Alignment:
Q  134 ggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagata 233  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||  |||    
T  10591100 ggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tattaata 10591198  T
Q  234 atgaaccatgacatt 248  Q
    |||||||||||||||    
T  10591199 atgaaccatgacatt 10591213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 31081308 - 31081425
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  31081308 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtgactcttcatgggaaccattcatatacattggaacattattatttat-tatt 31081406  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  31081407 aataatgaaccatgacatt 31081425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 31076201 - 31076320
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcg-at 228  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| || |||||||||| |||||||||||||||||||| | ||    
T  31076201 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtgactcttcatggaaaccattcatatacattggaacattattatttattgtat 31076300  T
Q  229 agataatgaaccatgacatt 248  Q
      ||||||||||||||||||    
T  31076301 taataatgaaccatgacatt 31076320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 244 - 422
Target Start/End: Complemental strand, 47278413 - 47278235
Alignment:
Q  244 acattcaggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttg 342  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||| ||||  ||||||||||||||||||||||||| | ||| | |||||||| ||    
T  47278413 acatgcaggggcggatctctttagagacccccaggtgccactgcaccc-ccaatatttatataaatatcatattaggcataatatttacagtatgtgatg 47278315  T
Q  343 tagttccagcggttacgaagtctgtgaattagttaatgttcctgtgttcgatcccttgtcactctctttttatatttttt 422  Q
      |||| |||||||||||||||||| ||| |||||||  ||  | ||| ||||||||| ||| |||||||||||||||||    
T  47278314 gtgttctagcggttacgaagtctgtaaataagttaattgtcacgggtttgatcccttggcaccctctttttatatttttt 47278235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 8458715 - 8458621
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttat 224  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8458715 tgttggtgatttccaaaataatggaatcactttagaactaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat 8458621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 269580 - 269486
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttat 224  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||| |||| || |||||||||||||||||||||||||||||||    
T  269580 tgttggtgatttccaaaataatggaatcactttagaatcaaaagttgtagctctttatggaaaccattcatatatattggaacattattatttat 269486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 127 - 248
Target Start/End: Original strand, 5457814 - 5457929
Alignment:
Q  127 ttatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcg 226  Q
    ||||||||||||||||||||||||| ||||     ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||      
T  5457814 ttatgttggtgatttccaaaataatggaat-----tagaatcaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-t 5457907  T
Q  227 atagataatgaaccatgacatt 248  Q
    ||  ||||||||||||||||||    
T  5457908 attaataatgaaccatgacatt 5457929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 249 - 350
Target Start/End: Original strand, 8541097 - 8541199
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttgtagtt 347  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||| ||| | ||||| |||||||||||| |||    
T  8541097 caggggcggatctctttagagacccccaggtgccactgcaccccccaacatttatataaatatcatattagtcataatattcacagtatgtgttgtcgtt 8541196  T
Q  348 cca 350  Q
    |||    
T  8541197 cca 8541199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 652 - 751
Target Start/End: Complemental strand, 50770054 - 50769955
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| ||||||||||||||||||| |||||| ||| |||||||||| ||||||||| ||||||||||||||||||| |||||| |  |||||||||||||    
T  50770054 accatcacaccagtttacaatattatatattttttaaaacgttttactatatattctacaaatatttggcacccccgataaataaactcaagatccgcca 50769955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 759 - 866
Target Start/End: Complemental strand, 29827751 - 29827644
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||||||||||||||| |||||||||||| ||||  ||||||||||||||| || |||| |||||||||| |||| ||||||  |||||||||  |    
T  29827751 cattgattcaagtgtatatgattataacatttgacaaattggtgcttaatgaaccttagcattgattcaagtgtgtatggtcataatctttggcaaaatg 29827652  T
Q  859 gtgcttaa 866  Q
    ||||||||    
T  29827651 gtgcttaa 29827644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 580
Target Start/End: Complemental strand, 50770054 - 50769957
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||| ||||||||||||||||||| |||||| ||| |||||||||| ||||||||| |||||||| |||||||||||| |||| |  |||||||||||    
T  50770054 accatcacaccagtttacaatattatatattttttaaaacgttttactatatattctacaaatatttggcacccccgataaataaactcaagatccgc 50769957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 1302155 - 1302230
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  1302155 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 1302230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 4050101 - 4050026
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  4050101 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 4050026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 4055235 - 4055160
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  4055235 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 4055160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 5481399 - 5481474
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  5481399 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaagt 5481474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 10672849 - 10672924
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  10672849 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 10672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 10677962 - 10678037
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  10677962 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 10678037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 31076313 - 31076388
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  31076313 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 31076388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 31081418 - 31081493
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  31081418 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 31081493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 5457922 - 5457997
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||  |||| ||||||||    
T  5457922 atgacattgattcaagtatatatggttataacccttggcaaaagggtgcttaatgaatcatgacattgattcaagt 5457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 6852863 - 6852938
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||  |||| ||||||||    
T  6852863 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttgatgaatcatggcattgattcaagt 6852938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 6857966 - 6858041
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||  |||| ||||||||    
T  6857966 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttgatgaatcatggcattgattcaagt 6858041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 10584769 - 10584844
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  10584769 atgacattgattcaaatatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 10584844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 10591206 - 10591281
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||  |||| ||||||||    
T  10591206 atgacattgattcaagtatatatggttataacctttggtaaaagggtgcttaatgaatcatggcattgattcaagt 10591281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 33702510 - 33702585
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  33702510 atgacattgattcaagtatataaggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 33702585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 8458602 - 8458530
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||  |||| ||||||||    
T  8458602 acattgattcaagtatatatggttataacctttggcaaaagggtggttaatgaatcatggcattgattcaagt 8458530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 657 - 753
Target Start/End: Original strand, 27813719 - 27813815
Alignment:
Q  657 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccact 753  Q
    ||||||||||||||||||| |||||  |||||||| ||||| ||||||||| ||||||||||| ||| ||| | |||| |  |||||||||||||||    
T  27813719 cacaccagtttacaatattatatatcttttgaaactttttagtatatattctacaaatatttgacactcccgaaaaataaactcaagatccgccact 27813815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 3187245 - 3187364
Alignment:
Q  129 atgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgat 228  Q
    ||||| |||||||  |||| ||| |||||| |||| || |||||||||||| | || ||| |||||||||||||  ||||||||| |||||||||  |||    
T  3187245 atgtttgtgatttttaaaacaattgaatcactttaaaatcaaaagttgtaattttttatgagaatcattcatatgcattggaacaatattatttactgat 3187344  T
Q  229 agataatgaaccatgacatt 248  Q
    ||||||||||| || |||||    
T  3187345 agataatgaactataacatt 3187364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 8465043 - 8464968
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||| |||||| |||||||||||||| |||||||||| ||||||||||||| |||  |||| ||||||||    
T  8465043 atgacattgactcaagtatatatggttataacctttggcaaaatggtgcttaatgaatcatgacattgattcaagt 8464968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 18023978 - 18024047
Alignment:
Q  173 gttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccat 242  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||  |||||||| | ||||||    
T  18023978 gttgtaactcttcataggaatcaatcatatacattggaacattattatttactgatagatattaaaccat 18024047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 488 - 580
Target Start/End: Original strand, 27813719 - 27813811
Alignment:
Q  488 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    ||||||||||||||||||| |||||  |||||||| ||||| ||||||||| |||||||| || ||| ||||| |||| |  |||||||||||    
T  27813719 cacaccagtttacaatattatatatcttttgaaactttttagtatatattctacaaatatttgacactcccgaaaaataaactcaagatccgc 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 29827885 - 29827829
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||||| ||| |||||| ||||||| |||||||||||||||||||    
T  29827885 tgttggtgatttccaaaagaatggaatcactttagaatcaaaagttgtaactcttca 29827829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 18023914 - 18023965
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaact 181  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  18023914 tgttggtgatttccaaaataatggaatcactttataaccaaaagttgtaact 18023965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 29827692 - 29827621
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||| |||||| ||||  |||||||||| ||||||||||||| |||| |||| ||||||||    
T  29827692 cattgattcaagtgtgtatggtcataatctttggcaaaatggtgcttaatgaatcataacattgattcaagt 29827621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 49784775 - 49784704
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| | ||||  ||||||||| |||||||||||||| |||| |||| ||||||||    
T  49784775 cattgattcaagtgtatatgatcataagctttggcaaatgggtgcttaatgaatcataacattgattcaagt 49784704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 830
Target Start/End: Complemental strand, 20891402 - 20891354
Alignment:
Q  782 ataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  20891402 ataacctttggcaaaagggtgcttaatgaaccatagcattgattcaagt 20891354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 18023390 - 18023445
Alignment:
Q  178 aactcttcatgggaatcattcatatatattggaacattattatttatcgatagata 233  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||  ||||||||    
T  18023390 aacttttcataggaatcattcatatatattagaacattattatttactgatagata 18023445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 771 - 830
Target Start/End: Complemental strand, 20891340 - 20891281
Alignment:
Q  771 tgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||| | ||||| ||||||||| || ||||||||||||||||||||| ||||||||    
T  20891340 tgtatatgatcataacctttggcaaatggttgcttaatgaaccatatcattgattcaagt 20891281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 788 - 866
Target Start/End: Complemental strand, 29827781 - 29827703
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||||||||  |||| |||||||||| |  |||| ||||||||||||||||| |||| ||||| ||||| |||||||||    
T  29827781 tttggcaaacaggtgtttaatgaacctttgcattgattcaagtgtatatgattataacatttgacaaattggtgcttaa 29827703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 694 - 754
Target Start/End: Complemental strand, 19466193 - 19466133
Alignment:
Q  694 tttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||||||||||||   |||||||||||||||||||||||  | |||||||||| ||||||    
T  19466193 tttaatatatattcataaaatatttggcacccccaataaaaaaattcaagatccaccactg 19466133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 27813512 - 27813554
Alignment:
Q  249 caggggcggatctctttagaga-ccccaggtgctactgcaccc 290  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  27813512 caggggcggatctctttagagacccccaggtgccactgcaccc 27813554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 47649065 - 47648995
Alignment:
Q  685 ttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactga 755  Q
    |||||||  |||||||||||||||| | | ||||||||||||||| || | |  |||||||||||||||||    
T  47649065 ttgaaaccatttaatatatattccatagaaatttggcacccccaagaatttaactcaagatccgccactga 47648995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 754
Target Start/End: Original strand, 4221355 - 4221424
Alignment:
Q  685 ttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||  ||||||||||||| || | |  |||||||||||||| |||| | |||||||||||||||||    
T  4221355 ttgaaactgtttaatatatatttcatagaagtttggcacccccaacaaattaattcaagatccgccactg 4221424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 773 - 830
Target Start/End: Original strand, 18023468 - 18023525
Alignment:
Q  773 tatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||| |||||  |||| ||| |||||||||||||| ||||||||| ||||||||    
T  18023468 tatatggtcataaccgttggtaaaggggtgcttaatgaatcatatcattgattcaagt 18023525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 805 - 862
Target Start/End: Complemental strand, 49784847 - 49784790
Alignment:
Q  805 taatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgc 862  Q
    |||||||||||  |||| ||||||||||||||| | |||| |||||||||| ||||||    
T  49784847 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagggtgc 49784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 1e-55; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 249 - 580
Target Start/End: Original strand, 7497030 - 7497375
Alignment:
Q  249 caggggcggatctctttagagaccccaggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcata-gtatgtgttgtagtt 347  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||| | ||| | | ||||||| ||  |||    
T  7497030 caggggcggatctctttagagaccccaggtgccactggaccccccaacatttatataaatatcatattaggcataatatttacaagtatgtgatggtgtt 7497129  T
Q  348 ccagcggttacgaagtctgtgaattagttaatgttcctgtgttcgatcccttgtcactctctttttatattttttcaccgaa-------------agatc 434  Q
    |||||||||||||||||||| ||| |||||||  ||  |  |||||||| ||| |||  ||||||||||||| |||||||||             | | |    
T  7497130 ccagcggttacgaagtctgtaaataagttaattgtcacggtttcgatcctttggcaccgtctttttatatttgttcaccgaattcttgatattttatacc 7497229  T
Q  435 ctaacag---gaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaata 531  Q
     ||| ||   |||| ||||| || || | | || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7497230 ataaaagcaagaatcgaaccagcatcctataagataaaatcaaacatttgcaccaccacaccagtttacaatat-gtatattgtttgaaacgttttaata 7497328  T
Q  532 tatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||||||||||||||| ||||| ||||||| |||| |||||||||||||    
T  7497329 tatattccacaaatatttggca-ccccgag-aatggtatcaagatccgc 7497375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 17720327 - 17720444
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  17720327 tgttggtgatttccaaaataatagaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 17720425  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  17720426 aataatgaaccatgacatt 17720444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 635 - 726
Target Start/End: Original strand, 7497264 - 7497354
Alignment:
Q  635 taaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccc 726  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7497264 taaaatcaaacatttgcaccaccacaccagtttacaatat-gtatattgtttgaaacgttttaatatatattccacaaatatttggcacccc 7497354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 14917183 - 14917300
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  14917183 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 14917281  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  14917282 aataatgaaccatgacatt 14917300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 128 - 248
Target Start/End: Original strand, 30283249 - 30283368
Alignment:
Q  128 tatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcga 227  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||  |    
T  30283249 tatgttggtgatttccaaaataatggaatcattttagaaccaaaagttgtaactcttcatgggaaccattcatgtacattggaacattattatttat-ta 30283347  T
Q  228 tagataatgaaccatgacatt 248  Q
    | |||| ||||||||||||||    
T  30283348 ttgatactgaaccatgacatt 30283368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 17720000 - 17720117
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||  ||     
T  17720000 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaactattcatatacattggaacattattatttat-tatt 17720098  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  17720099 aataatgaaccatgacatt 17720117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 39179002 - 39178885
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  39179002 tgttggtgatttccaaaataatggaatcactttagaactaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 39178904  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  39178903 aataatgaaccatgacatt 39178885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 45120790 - 45120673
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||| |||||||||| |||| |||||||||||||||  ||     
T  45120790 tgttggtgatttccaaaataatggaatcactttagaattaaaagttgtaactcttcatgggaaccattcatatacattgaaacattattatttat-tatt 45120692  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  45120691 aataatgaaccatgacatt 45120673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 652 - 751
Target Start/End: Original strand, 26823103 - 26823202
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| ||||||||||||||||||| |||||| ||| |||||||||| ||||||||| ||||||||||||||||||| |||||| |  |||||||||||||    
T  26823103 accatcacaccagtttacaatattatatattttttaaaacgttttactatatattctacaaatatttggcacccccgataaataaactcaagatccgcca 26823202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 760 - 866
Target Start/End: Original strand, 20892207 - 20892313
Alignment:
Q  760 attgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatggg 859  Q
    ||||||||||||||||||| | || |||||||||||  | ||| ||||||||||||| |||| |||||||||||||||||||||| ||||| ||||  ||    
T  20892207 attgattcaagtgtatatgatcatgacatttggcaagtgagtgattaatgaaccataacattgattcaagtgtatatgatcataacatttgccaaaaagg 20892306  T
Q  860 tgcttaa 866  Q
    |||||||    
T  20892307 tgcttaa 20892313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 580
Target Start/End: Original strand, 26823103 - 26823200
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||| ||||||||||||||||||| |||||| ||| |||||||||| ||||||||| |||||||| |||||||||||| |||| |  |||||||||||    
T  26823103 accatcacaccagtttacaatattatatattttttaaaacgttttactatatattctacaaatatttggcacccccgataaataaactcaagatccgc 26823200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 14917293 - 14917368
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  14917293 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 14917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 30283361 - 30283436
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||  ||| ||||||||    
T  30283361 atgacattgattcaagtatatatggttataatctttggcaaaagggtgcttaatgaaccataatattgattcaagt 30283436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 45120680 - 45120605
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  45120680 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaagt 45120605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 652 - 754
Target Start/End: Complemental strand, 43822701 - 43822599
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| ||||||| |||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||  |||||| | |||| |  |||||||||||||    
T  43822701 accatcacaccaatttaaaattttgtatattttttgaaacgttttaatatatattctacaaatatttgcaacccccgagaaataaactcaagatccgcca 43822602  T
Q  752 ctg 754  Q
    |||    
T  43822601 ctg 43822599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 483 - 580
Target Start/End: Complemental strand, 43822701 - 43822604
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||| ||||||| |||| ||| ||||||||| |||||||||||||||||||||||| |||||||| ||  ||||||||||||| |  |||||||||||    
T  43822701 accatcacaccaatttaaaattttgtatattttttgaaacgttttaatatatattctacaaatatttgcaacccccgagaaataaactcaagatccgc 43822604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 759 - 855
Target Start/End: Complemental strand, 716602 - 716506
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaa 855  Q
    |||||||||||||||||||| ||||||| ||||| ||| |||||||||||||| | || |||| ||||||| || |||||||||||  |||||||||    
T  716602 cattgattcaagtgtatatgattataacctttggtaaaggggtgcttaatgaagcttagcattgattcaagagtgtatgatcataacctttggcaaa 716506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 17720437 - 17720512
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  17720437 atgacattgattgaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 17720512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 645 - 754
Target Start/End: Complemental strand, 13284150 - 13284041
Alignment:
Q  645 catttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaaga 744  Q
    |||||| ||||| |||||||||||| || ||||| ||| |||||||   ||||||||||||| || ||||||||||||||||||||   |  ||||||||    
T  13284150 catttgtaccactacaccagtttactatgttgtacattatttgaaaacgtttaatatatatttcataaatatttggcacccccaattttttttttcaaga 13284051  T
Q  745 tccgccactg 754  Q
    ||||||||||    
T  13284050 tccgccactg 13284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 799 - 858
Target Start/End: Complemental strand, 42780481 - 42780422
Alignment:
Q  799 ggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||  ||||||||||||    
T  42780481 ggtgcttaatgaaccataacattgattcaagtgtatatgatcataacctttggcaaatgg 42780422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 42780596 - 42780542
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactctt 184  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  42780596 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgttactctt 42780542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 758 - 814
Target Start/End: Original strand, 20892264 - 20892320
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaacca 814  Q
    ||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||||    
T  20892264 acattgattcaagtgtatatgatcataacatttgccaaaaaggtgcttaatgaacca 20892320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 42780463 - 42780391
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||||||||| ||  ||||||||||||||| |||| ||||||||    
T  42780463 acattgattcaagtgtatatgatcataacctttggcaaatggtggcttaatgaaccataacattgattcaagt 42780391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 43822970 - 43822900
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattag 318  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| ||||  |||||||| ||||||||||||    
T  43822970 caggggcggatctcttcagagacccccaggtgccactgcaccccccaaattttatatatatatcatattag 43822900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 755 - 800
Target Start/End: Complemental strand, 39178892 - 39178847
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaaggg 800  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||    
T  39178892 atgacattgattcaagtatatatggttataacctttggcaaaaggg 39178847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 756
Target Start/End: Complemental strand, 2642040 - 2641977
Alignment:
Q  692 gttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactgat 756  Q
    |||||||||||||||||| ||||||||||||  || |||||||||| ||||||||||| ||||||    
T  2642040 gttttaatatatattccataaatatttggca-tcctaataaatgatatcaagatccgcaactgat 2641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 558
Target Start/End: Complemental strand, 13284150 - 13284068
Alignment:
Q  476 catttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcaccccc 558  Q
    |||||| ||||| |||||||||||| || ||||| ||| |||||||   ||||||||||||| || |||||| ||||||||||    
T  13284150 catttgtaccactacaccagtttactatgttgtacattatttgaaaacgtttaatatatatttcataaatatttggcaccccc 13284068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 42780540 - 42780494
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  42780540 accaaaagttgtaactcttcatgagaatctttcatatacattggaac 42780494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 13284333 - 13284264
Alignment:
Q  254 gcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcat 322  Q
    |||||||||||| |||||||| |||||| ||||||||| |||   || ||||||||||||||||||||||    
T  13284333 gcggatctctttggagacccccaggtgccactgcacccaccagttttgatataaatatcatattaggcat 13284264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 20892154 - 20892203
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaacatt 215  Q
    ||||| ||||||||||||||||| ||| |||||||||| |||||||||||    
T  20892154 accaagagttgtaactcttcatgagaaccattcatatacattggaacatt 20892203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 754
Target Start/End: Complemental strand, 32164743 - 32164634
Alignment:
Q  645 catttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaaga 744  Q
    |||||| ||||| |||||||||||| || ||||| ||| |||||||    |||||||||||| || ||||| ||||||||||| | |  |  ||||||||    
T  32164743 catttgtaccactacaccagtttactatgttgtacattatttgaaaacgcttaatatatatttcataaatagttggcacccccgaaatttattttcaaga 32164644  T
Q  745 tccgccactg 754  Q
    ||||||||||    
T  32164643 tccgccactg 32164634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 678 - 754
Target Start/End: Complemental strand, 4580630 - 4580554
Alignment:
Q  678 atattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||| ||||||||  ||||||||||||| || | ||||||||||||||||| || | |  ||||||||||||||||    
T  4580630 atattttttgaaaccatttaatatatatttcatatatatttggcacccccaacaatttaactcaagatccgccactg 4580554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 716716 - 716634
Alignment:
Q  129 atgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    |||||| ||||||  |||||||| |||||| ||||||   |||||||||||||||| ||| ||||| |||||||| ||||||||    
T  716716 atgttgatgatttttaaaataatggaatcattttagatt-aaaagttgtaactctttatgtgaatctttcatatacattggaac 716634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 754
Target Start/End: Original strand, 13764839 - 13764941
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    ||||||||||||||| ||||| ||| | ||  |||||| |  |||||||||||||   |||||||||||||||||| | |||  |  |||||||||||||    
T  13764839 accaccacaccagttaacaatgttgcacatcttttgaatctgtttaatatatatttttcaaatatttggcacccccgaaaaaaaaactcaagatccgcca 13764938  T
Q  752 ctg 754  Q
    |||    
T  13764939 ctg 13764941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 32164996 - 32164923
Alignment:
Q  249 caggggcggatctctttagagaccccaggtgctactgcaccctccaacgtttatataaatatcatattaggcat 322  Q
    |||||| |||||||||| |||||||||||||| |||| |||| | |   || |||||||||| |||||||||||    
T  32164996 caggggtggatctctttggagaccccaggtgccactgtacccccgagttttgatataaatattatattaggcat 32164923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 755
Target Start/End: Complemental strand, 40934709 - 40934652
Alignment:
Q  698 atatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactga 755  Q
    |||||||||| | ||||||||||||||||||  |||  | ||||||||||||||||||    
T  40934709 atatatattctaaaaatatttggcacccccagaaaaaaagttcaagatccgccactga 40934652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0648 (Bit Score: 107; Significance: 3e-53; HSPs: 3)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 442 - 580
Target Start/End: Complemental strand, 4516 - 4378
Alignment:
Q  442 gaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccac 541  Q
    ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  4516 gaattgaaccggcatcatgtaagtcaaaatcaaacatttgcaccaccacaccagtttacaacattgtatattgattgaaacgttttaatatatattccac 4417  T
Q  542 aaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    || ||| ||||||||||||||||||||||||||||||||    
T  4416 aattatttggcacccccgagaaatgatatcaagatccgc 4378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0648; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 597 - 754
Target Start/End: Complemental strand, 4530 - 4373
Alignment:
Q  597 aaagatcctagcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgtttt 696  Q
    |||| ||| |||| ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4530 aaagctcccagcaagaattgaaccggcatcatgtaagtcaaaatcaaacatttgcaccaccacaccagtttacaacattgtatattgattgaaacgtttt 4431  T
Q  697 aatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  4430 aatatatattccacaattatttggcacccccgagaaatgatatcaagatccgccactg 4373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0648; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 4650 - 4531
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttgtagtt 347  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||| | |||||||||||||||||  |||    
T  4650 caggggcggatctctttagagacccccaggtgccactgcaccccccaacatttatataaatatcatattaggcataatattcatagtatgtgttggtgtt 4551  T
Q  348 ccagcggttacgaagtctgt 367  Q
    ||||||||||||||||||||    
T  4550 ccagcggttacgaagtctgt 4531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 107; Significance: 3e-53; HSPs: 3)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 442 - 580
Target Start/End: Complemental strand, 3986 - 3848
Alignment:
Q  442 gaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccac 541  Q
    ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  3986 gaattgaaccggcatcatgtaagtcaaaatcaaacatttgcaccaccacaccagtttacaacattgtatattgattgaaacgttttaatatatattccac 3887  T
Q  542 aaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    || ||| ||||||||||||||||||||||||||||||||    
T  3886 aattatttggcacccccgagaaatgatatcaagatccgc 3848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 597 - 754
Target Start/End: Complemental strand, 4000 - 3843
Alignment:
Q  597 aaagatcctagcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgtttt 696  Q
    |||| ||| |||| ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4000 aaagctcccagcaagaattgaaccggcatcatgtaagtcaaaatcaaacatttgcaccaccacaccagtttacaacattgtatattgattgaaacgtttt 3901  T
Q  697 aatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  3900 aatatatattccacaattatttggcacccccgagaaatgatatcaagatccgccactg 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 4120 - 4001
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttgtagtt 347  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||| | |||||||||||||||||  |||    
T  4120 caggggcggatctctttagagacccccaggtgccactgcaccccccaacatttatataaatatcatattaggcataatattcatagtatgtgttggtgtt 4021  T
Q  348 ccagcggttacgaagtctgt 367  Q
    ||||||||||||||||||||    
T  4020 ccagcggttacgaagtctgt 4001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 2e-48; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 442 - 580
Target Start/End: Complemental strand, 31835608 - 31835470
Alignment:
Q  442 gaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccac 541  Q
    ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||||    
T  31835608 gaattgaaccggcatcctgtaagtcaaaatcaaacatttgcaccaccacaccagtttacaataatgtattatgattgaaacgttttaatatatattccac 31835509  T
Q  542 aaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    || ||| ||||||||||||||||||||||||||||||||    
T  31835508 aattatttggcacccccgagaaatgatatcaagatccgc 31835470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 597 - 754
Target Start/End: Complemental strand, 31835622 - 31835465
Alignment:
Q  597 aaagatcctagcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgtttt 696  Q
    |||| ||| |||| ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||||| |||||  || ||||||||||||    
T  31835622 aaagctcccagcaagaattgaaccggcatcctgtaagtcaaaatcaaacatttgcaccaccacaccagtttacaataatgtattatgattgaaacgtttt 31835523  T
Q  697 aatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  31835522 aatatatattccacaattatttggcacccccgagaaatgatatcaagatccgccactg 31835465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 32429034 - 32429150
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  32429034 tgttggtgatttccaaaataatggaatcactttagaaccaagagttgtaactcttcatggaaatcattcatatacattggaacattattatttattgata 32429133  T
Q  230 gataatgaaccatgaca 246  Q
    |||||||||||||||||    
T  32429134 gataatgaaccatgaca 32429150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 606 - 754
Target Start/End: Original strand, 16207203 - 16207351
Alignment:
Q  606 agcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatat 705  Q
    |||| |||||||| |||| || | | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  16207203 agcaagaattgaatcggcatcctctaagtgaaaatcaaacattttcaccaccacaccagtttacaatattgtatattttttgaaacattttaatatatat 16207302  T
Q  706 tccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||||| |||| || | ||||||| ||||||||||||||||    
T  16207303 tccacaaatatttgacacctccgaaaaatgatatcaagatccgccactg 16207351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 442 - 580
Target Start/End: Original strand, 16207208 - 16207346
Alignment:
Q  442 gaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccac 541  Q
    |||||||| |||| || | | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  16207208 gaattgaatcggcatcctctaagtgaaaatcaaacattttcaccaccacaccagtttacaatattgtatattttttgaaacattttaatatatattccac 16207307  T
Q  542 aaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||||| || |||| |||| |||||||||||||||||||    
T  16207308 aaatatttgacacctccgaaaaatgatatcaagatccgc 16207346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 3424114 - 3424231
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||||||||| ||||    
T  3424114 tgtttgtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgagaacca-tcatatacattggaacattattatttattgata 3424212  T
Q  230 gataatgaaccatgacatt 248  Q
    |||||||||||||||||||    
T  3424213 gataatgaaccatgacatt 3424231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 35091318 - 35091201
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  35091318 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 35091220  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  35091219 aataatgaaccatgacatt 35091201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 249 - 422
Target Start/End: Complemental strand, 31835820 - 31835654
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttgtagtt 347  Q
    |||||||||||||||||||||||||| ||||        |||| ||||| ||||||||||||||||||||||||| | ||| |||||||||||||  |||    
T  31835820 caggggcggatctctttagagacccccaggt--------accccccaacatttatataaatatcatattaggcataatatttatagtatgtgttggtgtt 31835729  T
Q  348 ccagcggttacgaagtctgtgaattagttaatgttcctgtgttcgatcccttgtcactctctttttatatttttt 422  Q
    ||||| |||||||||||||| ||| |||| ||| ||||||||||||||||||| ||| |||||||||||||||||    
T  31835728 ccagctgttacgaagtctgtaaatcagttgatggtcctgtgttcgatcccttggcaccctctttttatatttttt 31835654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 128 - 248
Target Start/End: Complemental strand, 35096433 - 35096314
Alignment:
Q  128 tatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcga 227  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  |    
T  35096433 tatgttggtgatttccaaaataatggaatcactttagaacaaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-ta 35096335  T
Q  228 tagataatgaaccatgacatt 248  Q
    |  ||||||||||||||||||    
T  35096334 ttaataatgaaccatgacatt 35096314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 759 - 866
Target Start/End: Original strand, 25618163 - 25618270
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||| |||| |||    
T  25618163 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccataacattgattcaagtgtatatgatcataacctttcgcaactgg 25618262  T
Q  859 gtgcttaa 866  Q
     |||||||    
T  25618263 atgcttaa 25618270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 755 - 866
Target Start/End: Original strand, 32429145 - 32429256
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaa 854  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||  |||| |||    
T  32429145 atgacaatgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaatcataacattgattcaagtgtatatgatcataacctttgacaa 32429244  T
Q  855 atgggtgcttaa 866  Q
    | ||||||||||    
T  32429245 aggggtgcttaa 32429256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 244 - 422
Target Start/End: Complemental strand, 35187694 - 35187515
Alignment:
Q  244 acattcaggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttg 342  Q
    |||| |||||||||||||||||||||||||| || ||| ||||||||| || || ||||||||||||||||||||||||| | ||| |||||||||| ||    
T  35187694 acatccaggggcggatctctttagagacccccagatgccactgcaccccccgacatttatataaatatcatattaggcataatatttatagtatgtgatg 35187595  T
Q  343 tagttccagcggttacgaagtctgtgaattagttaatgttcctgtgttcgatcccttgtcactctctttttatatttttt 422  Q
      ||||||||||||| ||||||||| ||| |||||||  ||  | |||| |||||||| ||| |||||||||||||||||    
T  35187594 gtgttccagcggttatgaagtctgtaaataagttaattgtcacgggttcaatcccttggcaccctctttttatatttttt 35187515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 755 - 866
Target Start/End: Original strand, 3409460 - 3409571
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaa 854  Q
    ||||||||||||||| ||| ||| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||  ||||||||    
T  3409460 atgacattgattcaaatgtgtatagttataacctttggcaaaagggtacttaatgaaccataacattgattcaagtgtatatgatcataacctttggcaa 3409559  T
Q  855 atgggtgcttaa 866  Q
    | ||||||||||    
T  3409560 aggggtgcttaa 3409571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 672 - 754
Target Start/End: Complemental strand, 27993705 - 27993623
Alignment:
Q  672 tattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  27993705 tattgtatattatttgaaacgttttaatatatattccacaaatatttggcacccccaaaaaatgatatcaagatccgccactg 27993623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 16204740 - 16204850
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttgtagtt 347  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| |||||| ||  | |||||||||||| |||    
T  16204740 caggggcggatctctttagagacccccaggtgccactgcaccccccaacgtttatataaatatcatattatgcatgatatgtacagtatgtgttgttgtt 16204839  T
Q  348 ccagcggttac 358  Q
    |||| ||||||    
T  16204840 ccagtggttac 16204850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 755 - 844
Target Start/End: Complemental strand, 18716832 - 18716743
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataa 844  Q
    |||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||| |||| ||||||||||||||||||||||    
T  18716832 atgacattgattcaagtgtatatggttataacctttggccaaatagtgcttaatgaaccataacattgattcaagtgtatatgatcataa 18716743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 466 - 580
Target Start/End: Complemental strand, 35187446 - 35187337
Alignment:
Q  466 taaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaat 565  Q
    ||||||||||||||||||||||||||| |||||||||    ||||| | | |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  35187446 taaaatcaaacatttgcaccaccacactagtttacaa----gtatact-tgtgaaacgttttaatatatattccataaatatttggcacccccgagaaat 35187352  T
Q  566 gatatcaagatccgc 580  Q
    | |||||||||||||    
T  35187351 ggtatcaagatccgc 35187337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 755 - 838
Target Start/End: Complemental strand, 18671182 - 18671099
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatga 838  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  18671182 atgacattgatttaagtgtatatggttataacctttggcaaaatggtgcttaatgaaccataacattgattcaagtgtatatga 18671099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 597 - 761
Target Start/End: Complemental strand, 35187484 - 35187325
Alignment:
Q  597 aaagatcctagcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgtttt 696  Q
    |||| |||||||| |||| ||| |||| || | | || ||||||||||||||||||||||||||| |||||||||    ||||| | | |||||||||||    
T  35187484 aaagctcctagcaagaatcgaatcggcatcctttaagataaaatcaaacatttgcaccaccacactagtttacaa----gtatact-tgtgaaacgtttt 35187390  T
Q  697 aatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactgatgacat 761  Q
    ||||||||||||| ||||||||||||||||| | ||||| | ||||||||||||| |||| ||||    
T  35187389 aatatatattccataaatatttggcacccccgagaaatggtatcaagatccgccattgattacat 35187325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 755 - 844
Target Start/End: Complemental strand, 18737505 - 18737416
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataa 844  Q
    ||||||||||||||||||||||| |||||||| |||||| |||  ||||||||||||||||| |||| ||||||||||||||||||||||    
T  18737505 atgacattgattcaagtgtatattgttataacctttggctaaattgtgcttaatgaaccataacattgattcaagtgtatatgatcataa 18737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 580
Target Start/End: Complemental strand, 27993705 - 27993628
Alignment:
Q  503 tattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  27993705 tattgtatattatttgaaacgttttaatatatattccacaaatatttggcacccccaaaaaatgatatcaagatccgc 27993628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 657 - 756
Target Start/End: Complemental strand, 22910874 - 22910775
Alignment:
Q  657 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactgat 756  Q
    ||||||| |||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| | |||| |  ||||||||||||||||||    
T  22910874 cacaccaatttacaatattgtatattttttgaaactttttagtatatattctacaaatatttggcacccccgagaaataaactcaagatccgccactgat 22910775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 657 - 756
Target Start/End: Original strand, 22967648 - 22967747
Alignment:
Q  657 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactgat 756  Q
    ||||||| |||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| | |||| |  ||||||||||||||||||    
T  22967648 cacaccaatttacaatattgtatattttttgaaactttttagtatatattctacaaatatttggcacccccgagaaataaactcaagatccgccactgat 22967747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 3409393 - 3409467
Alignment:
Q  174 ttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3409393 ttgtaactcttcatgagaaccattcatatacattggaacattattatttattgatagataatgaaccatgacatt 3409467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 755 - 861
Target Start/End: Original strand, 3424224 - 3424330
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaa 854  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||  ||||||||||||  |||| |||    
T  3424224 atgacattgattcaaatgtgtatggttataacctttggcaaaagggtgcttaatgaaccataacattgatttaagtcgatatgatcataacctttgacaa 3424323  T
Q  855 atgggtg 861  Q
    | |||||    
T  3424324 aggggtg 3424330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 18716907 - 18716825
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  18716907 accaagagttgtaactcttcatgggaaccattcatatacattggtacattattatttagtgatagataatgaaccatgacatt 18716825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 18737580 - 18737498
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  18737580 accaagagttgtaactcttcatgggaaccattcatatacattggtacattattatttagtgatagataatgaaccatgacatt 18737498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 580
Target Start/End: Complemental strand, 22910874 - 22910782
Alignment:
Q  488 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    ||||||| |||||||||||||||||| |||||||| ||||| ||||||||| |||||||| ||||||||||||||||| |  |||||||||||    
T  22910874 cacaccaatttacaatattgtatattttttgaaactttttagtatatattctacaaatatttggcacccccgagaaataaactcaagatccgc 22910782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 580
Target Start/End: Original strand, 22967648 - 22967740
Alignment:
Q  488 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    ||||||| |||||||||||||||||| |||||||| ||||| ||||||||| |||||||| ||||||||||||||||| |  |||||||||||    
T  22967648 cacaccaatttacaatattgtatattttttgaaactttttagtatatattctacaaatatttggcacccccgagaaataaactcaagatccgc 22967740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 249 - 344
Target Start/End: Complemental strand, 27993795 - 27993699
Alignment:
Q  249 caggggcggatctctttagagaccccag-gtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagtatgtgttgta 344  Q
    |||||||||||||||||||||||||||  |||  ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  27993795 caggggcggatctctttagagaccccaaagtgtcactgcaccccccaacttttatataaatatcatattaggcatgatattcacagtatgtattgta 27993699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 788 - 866
Target Start/End: Complemental strand, 47071710 - 47071632
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||| |||||||    
T  47071710 tttggcaaatgggtgcttaatgaaccataacattgattcaagtgtatatgatcataacctttggcaaatggatgcttaa 47071632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 788 - 866
Target Start/End: Original strand, 54859062 - 54859140
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| |||||||    
T  54859062 tttggcaaaagggtgcttaatgaaacataacattgattcaagtgtatatgatcataacctttggcaaatggatgcttaa 54859140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 34279254 - 34279327
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatata 203  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  || |||||||||||||||||||||||    
T  34279254 tgttggtgatttccaaaataatggaatcactttagaaccaaaagtttcaattcttcatgggaatcattcatata 34279327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 54858987 - 54859060
Alignment:
Q  139 tttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  54858987 tttccaaaataatagaatcactttacaaccaaaaattgtaactcttcattggaatcattcatatacattggaac 54859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 35091208 - 35091133
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  35091208 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 35091133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 35096321 - 35096246
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  35096321 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 35096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 759 - 861
Target Start/End: Original strand, 34279369 - 34279471
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||||||||||||||| ||||||| ||||||||| | ||||||||| |||| || |||| ||| ||||||||||||||||||  ||||| ||| ||    
T  34279369 cattgattcaagtgtatatgattataacctttggcaaatgagtgcttaataaaccttaacattgatttaagtgtatatgatcataacctttggtaaaagg 34279468  T
Q  859 gtg 861  Q
    |||    
T  34279469 gtg 34279471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 855
Target Start/End: Original strand, 14643630 - 14643697
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaa 855  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||||||| ||||| ||||    
T  14643630 tttggcaaaagggtgcttaatgaaccttaacattgattcaagtgtatatgatcataacatttgacaaa 14643697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 354 - 429
Target Start/End: Original strand, 16207096 - 16207171
Alignment:
Q  354 gttacgaagtctgtgaattagttaatgttcctgtgttcgatcccttgtcactctctttttatattttttcaccgaa 429  Q
    ||||||| |||||||||| |||||||| || |||||| ||||||||| ||| ||||||||||||||||||||||||    
T  16207096 gttacgaggtctgtgaatcagttaatggtcttgtgtttgatcccttggcaccctctttttatattttttcaccgaa 16207171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 18671242 - 18671175
Alignment:
Q  181 tcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    |||||||||||| |||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||    
T  18671242 tcttcatgggaaccattcatatacattggtacattattatttattgataaataatgaaccatgacatt 18671175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 22119130 - 22119073
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcat 187  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  22119130 tgttggtgattttcaaaataatggaatcactttagaaccaaaagttgtaactcttcat 22119073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 3409522 - 3409594
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||||||||| |||||||||||||| |||| |||| ||||||||    
T  3409522 acattgattcaagtgtatatgatcataacctttggcaaaggggtgcttaatgaatcatagcattgattcaagt 3409594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 14643526 - 14643582
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  14643526 tgttggtgatttacaaaataattgaatcactttagaaccaaaagttgtaactcttca 14643582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 18716770 - 18716698
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||||| ||||| | |||||||||||||||||||| ||||||||    
T  18716770 acattgattcaagtgtatatgatcataacttttggtaaaagagagcttaatgaaccatatcattgattcaagt 18716698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 18737443 - 18737371
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||||| ||||| | |||||||||||||||||||| ||||||||    
T  18737443 acattgattcaagtgtatatgatcataacttttggtaaaagagagcttaatgaaccatatcattgattcaagt 18737371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 47071814 - 47071758
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  47071814 tgttggtgatttccaaaataatggaatcactttacaaccaaaagttgtaactcttca 47071758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 54859091 - 54859163
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||||||||| || |||||||||||||||| |||| ||||||||    
T  54859091 acattgattcaagtgtatatgatcataacctttggcaaatggatgcttaatgaaccataacattgattcaagt 54859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 34128122 - 34128205
Alignment:
Q  130 tgttggtgatttccaaaa-taatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    |||||||||||||||||| | || |||||| ||||||||||||||||||||||||   || ||||| |||||||||||||||||    
T  34128122 tgttggtgatttccaaaaattatggaatcattttagaaccaaaagttgtaactctctgtgagaatctttcatatatattggaac 34128205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 866
Target Start/End: Original strand, 34279339 - 34279417
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||| |||| |||||||||||||||| || |||| ||||||||||||||||| ||||  ||||||||||| ||||||||    
T  34279339 tttgacaaatgggtgcttaatgaaccttagcattgattcaagtgtatatgattataacctttggcaaatgagtgcttaa 34279417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 657 - 727
Target Start/End: Complemental strand, 42841794 - 42841724
Alignment:
Q  657 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcaccccc 727  Q
    |||||||||||||||||||||||||  ||| |||| ||||| ||||||||| |||||||||||| ||||||    
T  42841794 cacaccagtttacaatattgtatatctttttaaactttttagtatatattctacaaatatttggtaccccc 42841724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 565
Target Start/End: Complemental strand, 42841794 - 42841717
Alignment:
Q  488 cacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaat 565  Q
    |||||||||||||||||||||||||  ||| |||| ||||| ||||||||| |||||||| ||| |||||||| ||||    
T  42841794 cacaccagtttacaatattgtatatctttttaaactttttagtatatattctacaaatatttggtacccccgaaaaat 42841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 8823662 - 8823590
Alignment:
Q  251 ggggcggatctctttagagaccc-caggtgctactgcaccctccaacgtttatataaatatcatattaggcat 322  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |||   || ||||||||||||||||||||||    
T  8823662 ggggcggatctctttagagaccctcaggtgccactgcaccccccagttttgatataaatatcatattaggcat 8823590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 47071681 - 47071609
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||||||||| || |||||||||||||||  |||| ||||||||    
T  47071681 acattgattcaagtgtatatgatcataacctttggcaaatggatgcttaatgaaccattgcattgattcaagt 47071609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 788 - 866
Target Start/End: Complemental strand, 22119026 - 22118948
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    ||||||||| |||||||||||||||| || |||| ||||||||||||||||||  ||  || |||||| ||||||||||    
T  22119026 tttggcaaatgggtgcttaatgaaccttagcattgattcaagtgtatatgatcgcaaccttcggcaaaggggtgcttaa 22118948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 34601823 - 34601881
Alignment:
Q  128 tatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||||||||||||| |||||||| |||||| |||||||| ||||||||||||| ||||    
T  34601823 tatgttggtgatttctaaaataatggaatcattttagaactaaaagttgtaacttttca 34601881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 759 - 816
Target Start/End: Original strand, 30019763 - 30019820
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccata 816  Q
    ||||||||||||||| |||| | ||||| |||||||||| ||||||||||||||||||    
T  30019763 cattgattcaagtgtgtatgatcataacctttggcaaaaaggtgcttaatgaaccata 30019820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 14643659 - 14643731
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | |||||||||| |||| | ||| |||||||||| || |||| ||||||||    
T  14643659 acattgattcaagtgtatatgatcataacatttgacaaaggagtgtttaatgaaccttagcattgattcaagt 14643731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 18671120 - 18671048
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||||   ||||| ||||| ||||| | ||||||||||||||| |||| ||||||||    
T  18671120 acattgattcaagtgtatatgaagataacctttggtaaaagagggcttaatgaaccatagcattgattcaagt 18671048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 25618048 - 25618108
Alignment:
Q  128 tatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatg 188  Q
    |||||||||||||||||||||| | |||||| |||||||| || |||||||||| ||||||    
T  25618048 tatgttggtgatttccaaaatattggaatcactttagaactaagagttgtaactgttcatg 25618108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 32429207 - 32429279
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| |||| |||| |||||||||||||| |||  |||| ||||||||    
T  32429207 acattgattcaagtgtatatgatcataacctttgacaaaggggtgcttaatgaatcatggcattgattcaagt 32429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 3409329 - 3409376
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgt 177  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||    
T  3409329 tgttggtgatttccaaaataatggaatcactttagaactaaaagttgt 3409376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 22118996 - 22118925
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| |   ||| || |||||| |||||||||||||||||||| ||| ||||||||    
T  22118996 cattgattcaagtgtatatgatcgcaaccttcggcaaaggggtgcttaatgaaccatattattcattcaagt 22118925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 783 - 866
Target Start/End: Original strand, 25618128 - 25618211
Alignment:
Q  783 taacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||| |||| ||||||||| ||||||||||  |  |||| ||||||||||||||| | |||| |||||||||| ||||||||||    
T  25618128 taacctttgacaaaagggttcttaatgaacttttgcattgattcaagtgtatatggttataacatttggcaaaagggtgcttaa 25618211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 14643582 - 14643628
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  14643582 accaagagttgtaactattcatgggaatcattcatatacattggaac 14643628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 30019692 - 30019738
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  30019692 accaagagttgtaactcttcatgggaatctttcatatacattggaac 30019738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 42842065 - 42841995
Alignment:
Q  249 caggggcggatctctttagagaccc-caggtgctactgcaccctccaacgtttatataaatatcatattaggc 320  Q
    ||||| ||||||||||||||||||| || |||| |||||||||  || | |||||||||||||||||||||||    
T  42842065 cagggacggatctctttagagacccgcaagtgccactgcaccc--cagcttttatataaatatcatattaggc 42841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 45071265 - 45071338
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcaccc 725  Q
    ||||||||||||||| ||||| ||| | ||| ||||||||  ||||||||||||||  ||||||||| ||||||    
T  45071265 accaccacaccagttaacaatgttgcacattttttgaaactatttaatatatattcttcaaatattttgcaccc 45071338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 25618221 - 25618293
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||| ||||  || ||||||||||| |||| |||| ||||||||    
T  25618221 acattgattcaagtgtatatgatcataacctttcgcaactggatgcttaatgaatcataacattgattcaagt 25618293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 798 - 866
Target Start/End: Original strand, 30019743 - 30019811
Alignment:
Q  798 gggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||||||||||||||| |  |||| |||||||||| |||||||||||  |||||||||  |||||||||    
T  30019743 gggtgcttaatgaacctttgcattgattcaagtgtgtatgatcataacctttggcaaaaaggtgcttaa 30019811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 34279427 - 34279499
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||| ||||||||||| | ||||| ||||| ||||||||| | ||| ||||||| |||| ||||||||    
T  34279427 acattgatttaagtgtatatgatcataacctttggtaaaagggtgttcaattaaccataacattgattcaagt 34279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 30019636 - 30019692
Alignment:
Q  128 tatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||||||||||||| |||||||| |||||| ||||||| |  ||||||||||||||||    
T  30019636 tatgttggtgatttctaaaataatggaatcactttagaatc--aagttgtaactcttca 30019692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 18716958 - 18716920
Alignment:
Q  134 ggtgatttccaaaataatagaatcaatttagaaccaaaa 172  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  18716958 ggtgatttccaaaataatggaatcagtttagaaccaaaa 18716920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 18737634 - 18737596
Alignment:
Q  134 ggtgatttccaaaataatagaatcaatttagaaccaaaa 172  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  18737634 ggtgatttccaaaataatggaatcagtttagaaccaaaa 18737596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 753
Target Start/End: Complemental strand, 19090550 - 19090449
Alignment:
Q  652 accaccacaccagtttacaatattgtatatt-gtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcc 750  Q
    ||||||||||||||| |  |||||| ||||| |||| ||||  |||| ||| ||||||||||||||||| ||||||||| |||  | ||||||||||| |    
T  19090550 accaccacaccagttcattatattg-atatttgtttaaaactgtttagtatttattccacaaatatttgacacccccaacaaaataattcaagatccgtc 19090452  T
Q  751 act 753  Q
    |||    
T  19090451 act 19090449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 45071008 - 45071046
Alignment:
Q  252 gggcggatctctttagagaccccaggtgctactgcaccc 290  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  45071008 gggcggatctctttggagaccccaggtgccactgcaccc 45071046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 47071758 - 47071712
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| |||||||||||||||||  ||||||||||||| ||||||||    
T  47071758 accaagagttgtaactcttcatgaaaatcattcatatacattggaac 47071712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Complemental strand, 5232352 - 5232311
Alignment:
Q  684 tttgaaacgttttaatatatattccacaaatatttggcaccc 725  Q
    ||||||||  |||||||||||||||| |||||||||||||||    
T  5232352 tttgaaactgtttaatatatattccataaatatttggcaccc 5232311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 805 - 866
Target Start/End: Original strand, 32429136 - 32429197
Alignment:
Q  805 taatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||||||||||  || | ||||||||||||||| | |||| |||||||||| ||||||||||    
T  32429136 taatgaaccatgacaatgattcaagtgtatatggttataacatttggcaaaagggtgcttaa 32429197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 556
Target Start/End: Original strand, 45071265 - 45071338
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcaccc 556  Q
    ||||||||||||||| ||||| ||| | ||| ||||||||  ||||||||||||||  ||||||| | ||||||    
T  45071265 accaccacaccagttaacaatgttgcacattttttgaaactatttaatatatattcttcaaatattttgcaccc 45071338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 8e-48; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 609 - 754
Target Start/End: Complemental strand, 8643399 - 8643254
Alignment:
Q  609 aggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattcc 708  Q
    ||||||||||||||| || | |  |||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8643399 aggaattgaaccggcatcctttatgttacaatcaaacatttgcaccttcacaccagtttacaatattgtatattgtttgaaacgttttaatatatattcg 8643300  T
Q  709 acaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||    
T  8643299 acaaatatttggcacctccaaaaaatgatatcaagatccgccactg 8643254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 440 - 580
Target Start/End: Complemental strand, 8643399 - 8643259
Alignment:
Q  440 aggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattcc 539  Q
    ||||||||||||||| || | |  |||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8643399 aggaattgaaccggcatcctttatgttacaatcaaacatttgcaccttcacaccagtttacaatattgtatattgtttgaaacgttttaatatatattcg 8643300  T
Q  540 acaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||||||| ||||||| || | |||||||||||||||||||    
T  8643299 acaaatatttggcacctccaaaaaatgatatcaagatccgc 8643259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 18493978 - 18494095
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  18493978 tgttggtgatttccaaaataatggaatcaatttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 18494076  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  18494077 aataatgaaccatgacatt 18494095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 14318416 - 14318533
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  14318416 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 14318514  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  14318515 aataatgaaccatgacatt 14318533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 26981676 - 26981793
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  26981676 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 26981774  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  26981775 aataatgaaccatgacatt 26981793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 26986790 - 26986907
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  26986790 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 26986888  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  26986889 aataatgaaccatgacatt 26986907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 34108634 - 34108517
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  34108634 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 34108536  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  34108535 aataatgaaccatgacatt 34108517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 14314712 - 14314829
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||| ||||||||| |||| | ||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||  ||     
T  14314712 tgttggtgattttcaaaataatggaattactttagaaccaaaagttgtaactcttaatgggaaccattcgtatacattggaacattattatttat-tatt 14314810  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  14314811 aataatgaaccatgacatt 14314829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 10340754 - 10340836
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    ||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  10340754 accaagagttgtaactcttcatggaaaccattcatatacattggaacattattatttattgatagataatgaaccatgacatt 10340836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 652 - 754
Target Start/End: Complemental strand, 19922335 - 19922231
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaata--tttggcacccccaataaatgatttcaagatccgc 749  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||| |||||||  |||||||| ||||| |||| |  |||||||||||    
T  19922335 accatcacaccagtttacaattttgtatattttttgaaacgttttagtatatattctacaaatatttttggcactcccaagaaataaactcaagatccgc 19922236  T
Q  750 cactg 754  Q
    |||||    
T  19922235 cactg 19922231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 14314822 - 14314897
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  14314822 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 14314897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 14318526 - 14318601
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  14318526 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 14318601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 18494088 - 18494163
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  18494088 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaagt 18494163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 26986900 - 26986975
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  26986900 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 26986975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 34108524 - 34108449
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  34108524 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaagt 34108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 26981786 - 26981861
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  26981786 atgacattgattcaagtatatacggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 26981861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 652 - 754
Target Start/End: Complemental strand, 39580692 - 39580590
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| |||||||||||||||||||| ||| | |||||||| ||||| ||||||||| ||||||||||||| ||| | | |||| |  |||||||||||||    
T  39580692 accatcacaccagtttacaatattggataatttttgaaactttttagtatatattctacaaatatttggctccctcgacaaataaactcaagatccgcca 39580593  T
Q  752 ctg 754  Q
    |||    
T  39580592 ctg 39580590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 43956650 - 43956732
Alignment:
Q  129 atgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaa 211  Q
    |||||||||||||  |||||||| |||||| ||||||| ||| |||||||||||||||||| |||| |||||||| |||||||    
T  43956650 atgttggtgatttttaaaataatggaatcactttagaatcaagagttgtaactcttcatggaaatctttcatatacattggaa 43956732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 39582122 - 39582061
Alignment:
Q  249 caggggcggatctctttagagaccccaggtgctactgcaccctccaacgtttatataaatat 310  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  39582122 caggggcgaatctctttagagatcccaggtgccactgcaccctccaacctttatataaatat 39582061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 10340881 - 10340953
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| |||| ||||||||||||||||||| |||| |||| ||||||||    
T  10340881 acattgattcaagtgtatatgatcataacctttgacaaaagggtgcttaatgaatcatagcattgattcaagt 10340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 762 - 830
Target Start/End: Original strand, 18608568 - 18608636
Alignment:
Q  762 tgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||||||||||||| |||| ||||||||    
T  18608568 tgattcaagtgtatatgttcataacctttggcaaaggggtgcttaatgaaccataacattgattcaagt 18608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 483 - 547
Target Start/End: Complemental strand, 19922335 - 19922271
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatat 547  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||    
T  19922335 accatcacaccagtttacaattttgtatattttttgaaacgttttagtatatattctacaaatat 19922271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 43956764 - 43956836
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||| |||||||| ||||||| |||||||||| ||||||||||||| |||| |||| ||||||||    
T  43956764 acattgattcaaatgtatatgattataacctttggcaaaaaggtgcttaatgaatcatagcattgattcaagt 43956836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 866
Target Start/End: Original strand, 18608535 - 18608613
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    ||||||||| |||||||| |||||||||| || | ||||||||||||||| ||||||  ||||||||| ||||||||||    
T  18608535 tttggcaaaggggtgcttgatgaaccatagcagtgattcaagtgtatatgttcataacctttggcaaaggggtgcttaa 18608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 580
Target Start/End: Complemental strand, 39580692 - 39580595
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||| |||||||||||||||||||| ||| | |||||||| ||||| ||||||||| |||||||| |||| ||| ||| |||| |  |||||||||||    
T  39580692 accatcacaccagtttacaatattggataatttttgaaactttttagtatatattctacaaatatttggctccctcgacaaataaactcaagatccgc 39580595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 755 - 866
Target Start/End: Original strand, 10340829 - 10340930
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaa 854  Q
    ||||||||||||||||||| |||||||||||| ||||||          |||||||| |||| |||| ||||||||||||||||||||||  |||| |||    
T  10340829 atgacattgattcaagtgtgtatggttataacctttggc----------ttaatgaatcataacattgattcaagtgtatatgatcataacctttgacaa 10340918  T
Q  855 atgggtgcttaa 866  Q
    | ||||||||||    
T  10340919 aagggtgcttaa 10340930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 760 - 816
Target Start/End: Original strand, 25953090 - 25953147
Alignment:
Q  760 attgattcaagtgtatatggttataacattt-ggcaaaagggtgcttaatgaaccata 816  Q
    ||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||    
T  25953090 attgattcaagtgtatatgatcataacattttggcaaaaggatgcttaatgaaccata 25953147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 719
Target Start/End: Complemental strand, 40308549 - 40308468
Alignment:
Q  638 aatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttg 719  Q
    |||||| || ||| ||||||||||||  |||||| |||||||||| | ||||||  | ||||||||||||||||||||||||    
T  40308549 aatcaagcaattgtaccaccacaccaacttacaacattgtatattttctgaaaccgtctaatatatattccacaaatatttg 40308468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 754
Target Start/End: Complemental strand, 412279 - 412195
Alignment:
Q  670 aatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||||||||||| |||||||||||||| ||||||||| | || |||||| ||| ||||| |||| |  |||||||||| |||||    
T  412279 aatattgtatattttttgaaacgttttagtatatattctaaaactatttgacactcccaaaaaataaactcaagatccgtcactg 412195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 10340697 - 10340745
Alignment:
Q  129 atgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgt 177  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  10340697 atgttggtgatttcccaaataatggaatcactttagaaccaaaagttgt 10340745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 37044968 - 37045048
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacatt 328  Q
    |||||||| ||||||| | ||||||| |||||| ||||||||| ||||| |||||||||||| |||||||| ||| |||||    
T  37044968 caggggcgaatctcttcatagacccccaggtgccactgcaccccccaacatttatataaatagcatattagccataacatt 37045048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 1782105 - 1782036
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||||   ||||||||| | ||| | ||||||||||||||||| |||| ||||||||    
T  1782105 acattgattcaagtgtatatg---ataacatttagaaaatgcgtgcttaatgaaccataacattgattcaagt 1782036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 18608487 - 18608525
Alignment:
Q  165 aaccaaaagttgtaactcttcatgggaatcattcatata 203  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  18608487 aaccaagagttgtaactcttcatgggaatcattcatata 18608525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 547
Target Start/End: Complemental strand, 40308549 - 40308471
Alignment:
Q  469 aatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatat 547  Q
    |||||| || ||| ||||||||||||  |||||| |||||||||| | ||||||  | |||||||||||||||||||||    
T  40308549 aatcaagcaattgtaccaccacaccaacttacaacattgtatattttctgaaaccgtctaatatatattccacaaatat 40308471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 18608435 - 18608479
Alignment:
Q  133 tggtgatttccaaaataatagaatcaatttagaaccaaaagttgt 177  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||    
T  18608435 tggtgatttccaaaataatggaatcactttagaactaaaagttgt 18608479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 866
Target Start/End: Original strand, 25953030 - 25953138
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataaga-tttggcaaatg 857  Q
    |||||||||||||||||||  | || |  ||||||||  | |||||| ||||||| ||  ||| |||||||||||||||||||||| | ||||||||| |    
T  25953030 cattgattcaagtgtatattatcatgagctttggcaattgagtgcttgatgaaccttaatattgattcaagtgtatatgatcataacattttggcaaaag 25953129  T
Q  858 ggtgcttaa 866  Q
    | |||||||    
T  25953130 gatgcttaa 25953138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 695 - 754
Target Start/End: Complemental strand, 5572602 - 5572543
Alignment:
Q  695 ttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||| || | |  ||||||||||||||||||  |||||||||||||||||||    
T  5572602 ttaatatatatttcatacaattttggcacccccaataaaatatttcaagatccgccactg 5572543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 695 - 753
Target Start/End: Complemental strand, 24888047 - 24887989
Alignment:
Q  695 ttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccact 753  Q
    ||||||||||||||| |||  |||||||||||||| |||| |  |||||||||||||||    
T  24888047 ttaatatatattccataaaattttggcacccccaacaaattaactcaagatccgccact 24887989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 538
Target Start/End: Complemental strand, 412279 - 412242
Alignment:
Q  501 aatattgtatattgtttgaaacgttttaatatatattc 538  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  412279 aatattgtatattttttgaaacgttttagtatatattc 412242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 290
Target Start/End: Complemental strand, 19779921 - 19779884
Alignment:
Q  253 ggcggatctctttagagaccccaggtgctactgcaccc 290  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  19779921 ggcggatctcttcagagaccccaggtgccactgcaccc 19779884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 729
Target Start/End: Complemental strand, 42446753 - 42446708
Alignment:
Q  684 tttgaaacgttttaatatatattccacaaatatttggcacccccaa 729  Q
    ||||||||  |||||||||||||||| |||||||||| ||||||||    
T  42446753 tttgaaactgtttaatatatattccataaatatttggtacccccaa 42446708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 1e-46; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 439 - 578
Target Start/End: Complemental strand, 29968561 - 29968422
Alignment:
Q  439 caggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattc 538  Q
    |||||||||||| |||||| | |  |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29968561 caggaattgaacaggcgtcctttatgttacaatcaaacatttgcacctccataccagtttacaatattgtatattgtttgaaacgttttaatatatattc 29968462  T
Q  539 cacaaatatctggcacccccgagaaatgatatcaagatcc 578  Q
    ||||||||| || ||||||||| |||||||||||||||||    
T  29968461 cacaaatatttgacacccccgaaaaatgatatcaagatcc 29968422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 605 - 747
Target Start/End: Complemental strand, 29968564 - 29968422
Alignment:
Q  605 tagcaggaattgaaccggcgtcttgttagttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatata 704  Q
    ||||||||||||||| |||||| | |  |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29968564 tagcaggaattgaacaggcgtcctttatgttacaatcaaacatttgcacctccataccagtttacaatattgtatattgtttgaaacgttttaatatata 29968465  T
Q  705 ttccacaaatatttggcacccccaataaatgatttcaagatcc 747  Q
    ||||||||||||||| ||||||| | ||||||| |||||||||    
T  29968464 ttccacaaatatttgacacccccgaaaaatgatatcaagatcc 29968422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 250 - 422
Target Start/End: Complemental strand, 29968777 - 29968603
Alignment:
Q  250 aggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattcatagta-tgtgttgtagtt 347  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||| | ||| |||||| |||||||| |||    
T  29968777 aggggcggatctctttagagacccccaggtgccactgcaccccccaacttttatataaatatcatattaggcattatattaatagtaatgtgttgttgtt 29968678  T
Q  348 ccagcggttacgaagtctgtgaattagttaatgttcctgtgttcgatcccttgtcactctctttttatatttttt 422  Q
    |||||||||| | ||||||||||| |||||||| |||| | |||||||||||| ||| || ||| ||||||||||    
T  29968677 ccagcggttatgcagtctgtgaatcagttaatggtcctctcttcgatcccttggcaccctttttctatatttttt 29968603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 21276176 - 21276059
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  21276176 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 21276078  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  21276077 aataatgaaccatgacatt 21276059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 11182989 - 11183073
Alignment:
Q  131 gttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacatt 215  Q
    |||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||    
T  11182989 gttggtcatttctaaaataatggaatcaatttagaaccaaatgttgtaactcttcatggaaatctttcatatacattggaacatt 11183073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 759 - 866
Target Start/End: Original strand, 24508716 - 24508823
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||||||||||||||| | || || ||||| ||| ||||| |||||||||| || |||||||||||||||||| ||||||||  ||||||||| ||    
T  24508716 cattgattcaagtgtatatgatcatgacctttggtaaaggggtgtttaatgaaccttagcattaattcaagtgtataagatcataacctttggcaaaagg 24508815  T
Q  859 gtgcttaa 866  Q
    ||||||||    
T  24508816 gtgcttaa 24508823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 21276066 - 21275991
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  21276066 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 21275991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 21936408 - 21936464
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  21936408 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 21936464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 759 - 866
Target Start/End: Complemental strand, 21937914 - 21937807
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||||||||||||||| | || || ||||| ||| ||||| ||||| |||  ||||||| ||||||||||||||||||||||  ||||||||| ||    
T  21937914 cattgattcaagtgtatatgatcatgacctttggaaaaggggtgtttaattaactttatcattgattcaagtgtatatgatcataacctttggcaaaagg 21937815  T
Q  859 gtgcttaa 866  Q
    ||| ||||    
T  21937814 gtgtttaa 21937807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 652 - 727
Target Start/End: Complemental strand, 32218192 - 32218117
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcaccccc 727  Q
    |||||||||||||||||||| |||||||||| || |||||  |||||||||||||||||||||||||  |||||||    
T  32218192 accaccacaccagtttacaacattgtatatttttcgaaacagtttaatatatattccacaaatatttatcaccccc 32218117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 32218192 - 32218115
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccga 560  Q
    |||||||||||||||||||| |||||||||| || |||||  ||||||||||||||||||||||| |  |||||||||    
T  32218192 accaccacaccagtttacaacattgtatatttttcgaaacagtttaatatatattccacaaatatttatcacccccga 32218115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 759 - 830
Target Start/End: Original strand, 20752053 - 20752124
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||||  ||||| |||| ||||| |||||||||||||||||| |||| ||||||||    
T  20752053 cattgattcaagtgtatatggccataacctttgacaaaatggtgcttaatgaaccataacattgattcaagt 20752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 759 - 866
Target Start/End: Original strand, 21936542 - 21936649
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    ||||||||||||| |||||| | || || ||||||||| ||||| ||| |||||| ||  ||| ||||||||||||||||||||||  |||||||||  |    
T  21936542 cattgattcaagtttatatgatcatgacctttggcaaaggggtgtttagtgaaccttagaatttattcaagtgtatatgatcataacctttggcaaaaag 21936641  T
Q  859 gtgcttaa 866  Q
    ||||||||    
T  21936642 gtgcttaa 21936649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 21937855 - 21937784
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||  |||| ||||||||    
T  21937855 cattgattcaagtgtatatgatcataacctttggcaaaagggtgtttaatgaaccatcacattgattcaagt 21937784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 759 - 830
Target Start/End: Original strand, 24508775 - 24508846
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||| ||||||||||||| | | ||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  24508775 cattaattcaagtgtataagatcataacctttggcaaaagggtgcttaatgaaccataacattgattcaagt 24508846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 652 - 727
Target Start/End: Complemental strand, 34884404 - 34884329
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcaccccc 727  Q
    ||||||||||||||| ||||||||| | ||| ||||||||  ||||||||||||||  ||||||||||||||||||    
T  34884404 accaccacaccagttaacaatattgaacattttttgaaactgtttaatatatattcttcaaatatttggcaccccc 34884329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 12909675 - 12909621
Alignment:
Q  132 ttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||||||||||    
T  12909675 ttggtgatttctaaaataatggaatcactttagaaccaaaagttgtaactcttca 12909621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 12934782 - 12934728
Alignment:
Q  132 ttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  12934782 ttggtgatttccaaaataatggaatcactctagaaccaaaagttgtaactcttca 12934728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 19293003 - 19292934
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| ||||| |||||||||||| |||||||    
T  19293003 caggggcggatctcttcagagacccccaggtgccactgcaccccccaacatttatataaatagcatatta 19292934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 21938028 - 21937943
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacatt 215  Q
    |||||||||||||||||||||| |||||| |||||||||| ||  ||||||||||||||  |||  ||| |||| |||||||||||    
T  21938028 tgttggtgatttccaaaataatggaatcattttagaaccataatatgtaactcttcatgaaaatatttcgtatacattggaacatt 21937943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 34884404 - 34884327
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccga 560  Q
    ||||||||||||||| ||||||||| | ||| ||||||||  ||||||||||||||  ||||||| ||||||||||||    
T  34884404 accaccacaccagttaacaatattgaacattttttgaaactgtttaatatatattcttcaaatatttggcacccccga 34884327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 759 - 866
Target Start/End: Original strand, 20751994 - 20752101
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    ||||| |||||||||||||  ||||||| |||| |||| ||||| |||||||||| || |||| |||||||||||||||  |||||  |||| ||||  |    
T  20751994 cattggttcaagtgtatattattataacctttgacaaaggggtgtttaatgaaccttagcattgattcaagtgtatatggccataacctttgacaaaatg 20752093  T
Q  859 gtgcttaa 866  Q
    ||||||||    
T  20752094 gtgcttaa 20752101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 764 - 830
Target Start/End: Original strand, 21936606 - 21936672
Alignment:
Q  764 attcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||| | ||||| |||||||||| |||||||||| ||||||| |||| ||||||||    
T  21936606 attcaagtgtatatgatcataacctttggcaaaaaggtgcttaataaaccataacattgattcaagt 21936672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 20751881 - 20751953
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatata 203  Q
    |||||||||||||||||||||| || ||| ||||| | ||||||||||||||||||||| ||| | ||||||||    
T  20751881 tgttggtgatttccaaaataatggattcactttag-atcaaaagttgtaactcttcatgagaacctttcatata 20751953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 784 - 844
Target Start/End: Original strand, 11183068 - 11183128
Alignment:
Q  784 aacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataa 844  Q
    ||||||||||||| |||| ||||||||||| || | || ||||||||||||||||||||||    
T  11183068 aacatttggcaaaggggtacttaatgaaccttagccttgattcaagtgtatatgatcataa 11183128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 754
Target Start/End: Complemental strand, 19292751 - 19292649
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| ||||||| ||| ||||||||  || | |||||||||||||| ||||||||| | || | |||||||||||| | |||| |  |||||||||||||    
T  19292751 accatcacaccaatttgcaatattgattaatttttgaaacgttttagtatatattctaaaactctttggcacccccgagaaataaactcaagatccgcca 19292652  T
Q  752 ctg 754  Q
    |||    
T  19292651 ctg 19292649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 580
Target Start/End: Complemental strand, 19292751 - 19292654
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||| ||||||| ||| ||||||||  || | |||||||||||||| ||||||||| | || | | ||||||||||||||||| |  |||||||||||    
T  19292751 accatcacaccaatttgcaatattgattaatttttgaaacgttttagtatatattctaaaactctttggcacccccgagaaataaactcaagatccgc 19292654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 788 - 861
Target Start/End: Original strand, 21936512 - 21936585
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtg 861  Q
    ||||||||| |||||||||||||||| |  |||| |||||||| ||||||||||| |  ||||||||| |||||    
T  21936512 tttggcaaatgggtgcttaatgaacctttgcattgattcaagtttatatgatcatgacctttggcaaaggggtg 21936585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 756
Target Start/End: Original strand, 3419172 - 3419276
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    ||||||||||||||| ||||| ||| | ||  |||||| |  |||||||||||||   |||||||||||||||||| | |||  |  |||||||||||||    
T  3419172 accaccacaccagttaacaatgttgcacatcttttgaatctgtttaatatatatttttcaaatatttggcacccccgaaaaaaaaactcaagatccgcca 3419271  T
Q  752 ctgat 756  Q
    |||||    
T  3419272 ctgat 3419276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 755
Target Start/End: Complemental strand, 19078784 - 19078683
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||||||||| |||||||||||||||||  | ||| |||| |||||  || |||| || ||||||||||||||||||| |||  |  | |||||||||||    
T  19078784 accaccacactagtttacaatattgtattcttttttaaacttttta--atgtatttcataaatatttggcacccccaagaaagaaacttaagatccgcca 19078687  T
Q  752 ctga 755  Q
    ||||    
T  19078686 ctga 19078683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 695 - 754
Target Start/End: Complemental strand, 30590274 - 30590215
Alignment:
Q  695 ttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||||||||||| || |||||||||||||||||| |||  |  ||||||||||||||||    
T  30590274 ttaatatatattctacgaatatttggcacccccaaaaaaataactcaagatccgccactg 30590215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 12909621 - 12909575
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| |||||||||| |||||| |||||||||||||| ||||||||    
T  12909621 accaagagttgtaacttttcatgagaatcattcatatacattggaac 12909575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 12934728 - 12934682
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| |||||||||| |||||| |||||||||||||| ||||||||    
T  12934728 accaagagttgtaacttttcatgagaatcattcatatacattggaac 12934682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 19079274 - 19079193
Alignment:
Q  248 tcaggggcggatctctttagagaccccag-gtgctactgcaccctccaacgtttatataaatatcatattaggcatgacattc 329  Q
    ||||||||||||||||| ||||||||  | |||| | ||||||| ||||| |||| |||||||||||||||| ||||| ||||    
T  19079274 tcaggggcggatctcttcagagacccacgagtgccattgcaccc-ccaacttttagataaatatcatattagccatgatattc 19079193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 3418990 - 3419059
Alignment:
Q  249 caggggcggatctctttagaga-ccccaggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    ||||||||||||||||| |||| |||||| ||| ||||||||| |||   ||||||||||| ||||||||    
T  3418990 caggggcggatctctttggagacccccagatgccactgcaccccccagtttttatataaatttcatatta 3419059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 10172510 - 10172586
Alignment:
Q  250 aggggcggatctctttagagacc--ccaggtgctactgcaccctccaacgtttatataaatatcatattaggcatga 324  Q
    ||||||| ||||||| |||||||  |||||||| ||||||||||||||  | ||||||||| | |||||| ||||||    
T  10172510 aggggcgaatctcttcagagacctcccaggtgccactgcaccctccaatttatatataaattttatattatgcatga 10172586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 761 - 830
Target Start/End: Original strand, 11183104 - 11183173
Alignment:
Q  761 ttgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||| | ||||| |||| |||| || || ||||||||||||| || | ||||||||    
T  11183104 ttgattcaagtgtatatgatcataacctttgacaaagggatgtttaatgaaccataacactgattcaagt 11183173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 24509993 - 24509918
Alignment:
Q  758 acattgattcaagtgtatatggttat---aacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||| ||||||||||||||| | ||   |||||||| |||||| ||| ||||||||||||| |||| ||||||||    
T  24509993 acattaattcaagtgtatatgatgatcataacatttgacaaaagtgtgtttaatgaaccataacattgattcaagt 24509918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 839
Target Start/End: Complemental strand, 24510051 - 24509971
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgat 839  Q
    ||||| ||||||||||||||  | || |  |||| |||||||||  |||||||||| || ||||||||||||||||||||||    
T  24510051 acattaattcaagtgtatataatcatgatctttgacaaaagggta-ttaatgaaccttaacattaattcaagtgtatatgat 24509971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 8e-42; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 43359206 - 43359091
Alignment:
Q  129 atgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgat 228  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  43359206 atgttggtgatttccaaaataatggaatcactttagaaccaagagttgtaactcttcatgagaatcattcatatacattggaacattattatttattgat 43359107  T
Q  229 agataatgaaccatga 244  Q
     |||||||||||||||    
T  43359106 tgataatgaaccatga 43359091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 28598712 - 28598595
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  28598712 tgttggtgatttccaaaataatggaatcaatttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 28598614  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  28598613 aataatgaaccatgacatt 28598595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 477 - 580
Target Start/End: Complemental strand, 25160563 - 25160460
Alignment:
Q  477 atttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagat 576  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  25160563 atttgcacctccacaccaatttacaatattgtatattgtttgaaatgttttaatatatattccacaaatatttggcacccccgtgaaatgatatcaagat 25160464  T
Q  577 ccgc 580  Q
    ||||    
T  25160463 ccgc 25160460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 28574700 - 28574583
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  28574700 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 28574602  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  28574601 aataatgaaccatgacatt 28574583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 646 - 755
Target Start/End: Complemental strand, 25160563 - 25160454
Alignment:
Q  646 atttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagat 745  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||| |||||||    
T  25160563 atttgcacctccacaccaatttacaatattgtatattgtttgaaatgttttaatatatattccacaaatatttggcacccccgtgaaatgatatcaagat 25160464  T
Q  746 ccgccactga 755  Q
    ||||||||||    
T  25160463 ccgccactga 25160454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 755 - 866
Target Start/End: Complemental strand, 43359094 - 43358984
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaa 854  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||  ||||||||    
T  43359094 atgatattgattcaagtgtatatggttataacatttggcaaaagggtgc-taatgaaccataacattgattcaagtgtatatgatcataacctttggcaa 43358996  T
Q  855 atgggtgcttaa 866  Q
    | ||||||||||    
T  43358995 aggggtgcttaa 43358984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 3468472 - 3468354
Alignment:
Q  129 atgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgat 228  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||  ||    
T  3468472 atgttggtgatttccaaaataatggaatcattttagaatcaaaagttgtaattcttcataggaaccattcatatacattggaacattattatttat-tat 3468374  T
Q  229 agataatgaaccatgacatt 248  Q
      ||||||||||||||||||    
T  3468373 taataatgaaccatgacatt 3468354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 761 - 844
Target Start/End: Complemental strand, 10185976 - 10185893
Alignment:
Q  761 ttgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataa 844  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  10185976 ttgattcaagtgtatatggttataacctttggcaaaaaggtgcttaatgaaccatatcattgattcaagtatatatgatcataa 10185893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 759 - 866
Target Start/End: Original strand, 10186437 - 10186544
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||| |||| ||||||||| |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  |||| |||| ||    
T  10186437 cattgattgaagtttatatggttgtaacttttggcaaaagggtgcttaatgaaccatagcattgattcaagtgtatatgatcataacctttgacaaaggg 10186536  T
Q  859 gtgcttaa 866  Q
    ||||||||    
T  10186537 gtgcttaa 10186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 759 - 866
Target Start/End: Original strand, 21431537 - 21431644
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgg 858  Q
    |||||||||||||||||||  ||||||| ||||||||| |||||||| ||||||| || |||| |||||||||| |||||||||||  ||||||||| ||    
T  21431537 cattgattcaagtgtatataattataacctttggcaaatgggtgcttgatgaaccttaacattgattcaagtgtgtatgatcataacctttggcaaaagg 21431636  T
Q  859 gtgcttaa 866  Q
    ||||||||    
T  21431637 gtgcttaa 21431644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 780 - 866
Target Start/End: Complemental strand, 16051512 - 16051426
Alignment:
Q  780 ttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    ||||||||||||| ||| || | |||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  16051512 ttataacatttggtaaatggatacttaatgaaccatagcattgattcaagtgtatatgatcataacatttggcaaatgagtgcttaa 16051426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 16051588 - 16051515
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatata 203  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  16051588 tgttggtgatttctaaaataatggaatcactttagaaccaaaagttataactctttatgggaatcattcatata 16051515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 3468361 - 3468286
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  3468361 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaagt 3468286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 16051474 - 16051403
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  16051474 cattgattcaagtgtatatgatcataacatttggcaaatgagtgcttaatgaaccatatcattgattcaagt 16051403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 28574590 - 28574515
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  28574590 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 28574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 28598602 - 28598527
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  28598602 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 28598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 3701295 - 3701377
Alignment:
Q  160 tttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccat 242  Q
    ||||||||||||||||||||||||| || |||| |||||||||| ||| |||||||||||||||   ||||||||||||||||    
T  3701295 tttagaaccaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataatgaaccat 3701377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 17414359 - 17414435
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccat 242  Q
    ||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||||   ||||||||||||||||    
T  17414359 accaaaagttgtaactcttcattagaatcattcatatacattagaacattattatttactaatagataatgaaccat 17414435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 25160709 - 25160634
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatga 324  Q
    |||||||||||||||||||||||||| |||||| ||||||||| || || |||||||||||||||||||||||||||    
T  25160709 caggggcggatctctttagagacccctaggtgccactgcaccc-ccgacttttatataaatatcatattaggcatga 25160634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 784 - 866
Target Start/End: Complemental strand, 1188134 - 1188052
Alignment:
Q  784 aacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||||||||||||||| || |||||||||| || |||| || |||||||||||||||||||  ||||||||||||||| ||||    
T  1188134 aacatttggcaaaaggatgattaatgaaccttagcattgatacaagtgtatatgatcataacctttggcaaatgggtgtttaa 1188052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 3696169 - 3696243
Alignment:
Q  168 caaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccat 242  Q
    ||||||||| |||| ||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||||||    
T  3696169 caaaagttgcaacttttcatgggaatcattcatatacattaaaacattattatttaccgataaataatgaaccat 3696243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 43671499 - 43671419
Alignment:
Q  244 acattcaggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatga 324  Q
    |||| |||| ||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||| ||||    
T  43671499 acatccaggagcggatctctttagagacccccaggtgccactgcaccc-ccaacctttatataaatatcatattaggtatga 43671419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Original strand, 21431595 - 21431667
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||| |||| | ||||| ||||||||||||||||||||||||||||| |||| ||| ||||    
T  21431595 acattgattcaagtgtgtatgatcataacctttggcaaaagggtgcttaatgaaccataacattgatttaagt 21431667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 651 - 754
Target Start/End: Original strand, 39864680 - 39864784
Alignment:
Q  651 caccaccacaccagtttacaatattgtatattgttt-gaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgc 749  Q
    ||||| |||| ||||| ||||||||||||||  ||| ||||| ||||| ||||||||| ||||||||||||||||||| | |||| |  |||||||||||    
T  39864680 caccatcacagcagttcacaatattgtatataattttgaaactttttagtatatattctacaaatatttggcacccccgagaaataaactcaagatccgc 39864779  T
Q  750 cactg 754  Q
    |||||    
T  39864780 cactg 39864784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 43359033 - 43358961
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| ||||||||| |||||||||||||| |||| |||| ||||||||    
T  43359033 acattgattcaagtgtatatgatcataacctttggcaaaggggtgcttaatgaatcatagcattgattcaagt 43358961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 1188100 - 1188029
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||| |||||||||||| | ||||| ||||||||| ||||| ||||||||||||| |||||||||||||    
T  1188100 cattgatacaagtgtatatgatcataacctttggcaaatgggtgtttaatgaaccataacattaattcaagt 1188029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 17414304 - 17414359
Alignment:
Q  131 gttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  17414304 gttggtgatttccaaaataatggaatcactttagaaccaaaacttgtaactcttca 17414359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 19311102 - 19311031
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||||||||||| ||| |||| ||||||||    
T  19311102 cattgattcaagtgtatatgatcataacctttggtaaaagggtgcttaatgaactataacattgattcaagt 19311031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 482 - 580
Target Start/End: Original strand, 39864680 - 39864779
Alignment:
Q  482 caccaccacaccagtttacaatattgtatattgttt-gaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    ||||| |||| ||||| ||||||||||||||  ||| ||||| ||||| ||||||||| |||||||| ||||||||||||||||| |  |||||||||||    
T  39864680 caccatcacagcagttcacaatattgtatataattttgaaactttttagtatatattctacaaatatttggcacccccgagaaataaactcaagatccgc 39864779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 13654730 - 13654676
Alignment:
Q  132 ttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  13654730 ttggtaatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 13654676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 866
Target Start/End: Complemental strand, 19311132 - 19311054
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    ||||||||| |||||| ||||||||| || |||| ||||||||||||||||||||||  ||||| ||| ||||||||||    
T  19311132 tttggcaaaggggtgcataatgaaccttagcattgattcaagtgtatatgatcataacctttggtaaaagggtgcttaa 19311054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 35653036 - 35653090
Alignment:
Q  132 ttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  35653036 ttggtgatttccaaaataatggaatcactttggaaccaaaagttgtaactcttca 35653090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 1188389 - 1188333
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||    
T  1188389 tgttggtgatttccaaaataatggaatcactttagaaccaaaaattgtaacttttca 1188333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 759 - 830
Target Start/End: Original strand, 10186496 - 10186567
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| | ||||| |||| |||| ||||||||||||||||||| ||||  |||||||    
T  10186496 cattgattcaagtgtatatgatcataacctttgacaaaggggtgcttaatgaaccatagcattggttcaagt 10186567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 653 - 727
Target Start/End: Original strand, 4198463 - 4198537
Alignment:
Q  653 ccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcaccccc 727  Q
    |||||||||||||| ||||||||||| ||| ||| ||||  ||||||||||||||   |||||||||||||||||    
T  4198463 ccaccacaccagttaacaatattgtacattttttaaaactgtttaatatatattctttaaatatttggcaccccc 4198537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 19311230 - 19311180
Alignment:
Q  136 tgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  19311230 tgatttccaaaataatggaatcactttataaccaaaagttgtaactcttca 19311180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 4198205 - 4198270
Alignment:
Q  252 gggcggatctctttagagaccccaggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    |||||||||||||| |||||||||||||| ||||||||| |||   ||||||||||| ||||||||    
T  4198205 gggcggatctctttggagaccccaggtgccactgcaccccccaggttttatataaatttcatatta 4198270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 21430777 - 21430833
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcat 187  Q
    |||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||    
T  21430777 tgttggtgattttcaaaataatagaatcattttag-atcaaaagttgtaactcttcat 21430833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 763 - 828
Target Start/End: Original strand, 35653172 - 35653237
Alignment:
Q  763 gattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaa 828  Q
    |||||||||||||||| | ||||| |||| |||| | |||||||||||||||||||||| ||||||    
T  35653172 gattcaagtgtatatgatcataacctttgacaaaggagtgcttaatgaaccatatcattgattcaa 35653237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 16632368 - 16632295
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccc----tccaacgtttatataaatatcatatta 317  Q
    ||||||| |||||||||||||||||| |||||| |||||||||    |||||| ||||||||||||||||||||    
T  16632368 caggggcagatctctttagagacccccaggtgccactgcaccccccctccaacctttatataaatatcatatta 16632295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 761 - 861
Target Start/End: Complemental strand, 35626465 - 35626366
Alignment:
Q  761 ttgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggt 860  Q
    |||||||||||||||||| ||||||| |||| ||||| |||  |||||||||| || |||| ||||||| || ||| |||||||  ||||||||| ||||    
T  35626465 ttgattcaagtgtatatgattataacctttgacaaaa-ggtatttaatgaaccttagcattgattcaagagtgtataatcataacttttggcaaaagggt 35626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 35653090 - 35653134
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattgga 210  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||    
T  35653090 accaagagttgtaacacttcatgggaatcattcatatatattgga 35653134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 725
Target Start/End: Complemental strand, 36565675 - 36565603
Alignment:
Q  653 ccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcaccc 725  Q
    |||||||||||||| ||||||||| | ||| ||||||||  ||||||||||||||  |||||||||| |||||    
T  36565675 ccaccacaccagttaacaatattgaacattttttgaaactgtttaatatatattcttcaaatatttgacaccc 36565603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 784 - 855
Target Start/End: Complemental strand, 1188289 - 1188218
Alignment:
Q  784 aacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaa 855  Q
    |||||||||||||||| ||||||||||| | || |||| || ||||||||||| |||||||  |||||||||    
T  1188289 aacatttggcaaaaggatgcttaatgaatcttaacattgatacaagtgtatattatcataacctttggcaaa 1188218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 13654598 - 13654527
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||| |||||||| |||| | |||||  ||||||||||||| |||||||||||||| |||| ||||||||    
T  13654598 cattgactcaagtgtgtatgatcataacccttggcaaaagggtacttaatgaaccataacattgattcaagt 13654527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 46671589 - 46671518
Alignment:
Q  248 tcaggggcggatctctttagaga-ccccaggtgctactgcaccctccaacgtttatataaatatcatattag 318  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||| ||||  |||||||| ||| ||||||||    
T  46671589 tcaggggcggatctcttcagagacccccaggtgccactgcaccccccaaattttatatatataacatattag 46671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 558
Target Start/End: Original strand, 4198463 - 4198537
Alignment:
Q  484 ccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcaccccc 558  Q
    |||||||||||||| ||||||||||| ||| ||| ||||  ||||||||||||||   |||||| ||||||||||    
T  4198463 ccaccacaccagttaacaatattgtacattttttaaaactgtttaatatatattctttaaatatttggcaccccc 4198537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 19311180 - 19311134
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  19311180 accaagagttgtaactcttcatgggaatctttcatatacattggaac 19311134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 693 - 755
Target Start/End: Original strand, 47476551 - 47476613
Alignment:
Q  693 ttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactga 755  Q
    |||| |||||||||||||||||||||| ||||||||| |||  |  |||||||||||||||||    
T  47476551 tttttatatatattccacaaatatttgacacccccaacaaaaaaactcaagatccgccactga 47476613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 1188178 - 1188129
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaacatt 215  Q
    ||||| |||||||||| |||||||||||| |||||||| |||||||||||    
T  1188178 accaagagttgtaactattcatgggaatctttcatatacattggaacatt 1188129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 10186101 - 10186056
Alignment:
Q  141 tccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  10186101 tccaaaataatggaatcactttagaatcaaaagttgtaactcttca 10186056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 39864443 - 39864496
Alignment:
Q  270 accccaggtgctactgcaccctccaacgtttatataaatatcatattaggcatg 323  Q
    |||||| |||| |||||||||  |||| ||||||||||||||||||||||||||    
T  39864443 accccaagtgccactgcacccctcaacctttatataaatatcatattaggcatg 39864496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 556
Target Start/End: Complemental strand, 36565675 - 36565603
Alignment:
Q  484 ccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcaccc 556  Q
    |||||||||||||| ||||||||| | ||| ||||||||  ||||||||||||||  ||||||| || |||||    
T  36565675 ccaccacaccagttaacaatattgaacattttttgaaactgtttaatatatattcttcaaatatttgacaccc 36565603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 678 - 754
Target Start/End: Original strand, 50432559 - 50432635
Alignment:
Q  678 atattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||| ||||||||  |||||||||||||||| | ||||||||||||||||| || | |  ||||||||||| ||||    
T  50432559 atattttttgaaaccatttaatatatattccatatatatttggcacccccaacaatttaactcaagatccgcaactg 50432635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 1188221 - 1188178
Alignment:
Q  143 caaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||    
T  1188221 caaaataatggaatcactttagaaccaaaagttgtaacttttca 1188178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 3696110 - 3696165
Alignment:
Q  129 atgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactctt 184  Q
    |||||||| ||||| |||||||| |||||| ||| ||| |||||||||||||||||    
T  3696110 atgttggtaatttctaaaataatggaatcactttggaatcaaaagttgtaactctt 3696165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 695 - 754
Target Start/End: Original strand, 3712798 - 3712857
Alignment:
Q  695 ttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||||||||||| || |||||||||||||||||| |||  |  ||||||||||||||||    
T  3712798 ttaatatatattctacgaatatttggcacccccaaaaaaataactcaagatccgccactg 3712857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 44523933 - 44523964
Alignment:
Q  172 agttgtaactcttcatgggaatcattcatata 203  Q
    ||||||||||||||||||||||||||||||||    
T  44523933 agttgtaactcttcatgggaatcattcatata 44523964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 792 - 866
Target Start/End: Complemental strand, 10186004 - 10185930
Alignment:
Q  792 gcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    ||||| |||||||||||||||| || | || ||||||||||||||| | ||||  |||||||||  |||||||||    
T  10186004 gcaaatgggtgcttaatgaaccttagcgttgattcaagtgtatatggttataacctttggcaaaaaggtgcttaa 10185930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 10186359 - 10186401
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattg 208  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||    
T  10186359 accaagagttgtaactcttcatgggaatctttcatatacattg 10186401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 695 - 756
Target Start/End: Original strand, 49915798 - 49915857
Alignment:
Q  695 ttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactgat 756  Q
    ||||||||||||| || ||||||||||||||| || |||  | |||||||||||||||||||    
T  49915798 ttaatatatattctaccaatatttggcaccccaaaaaaa--aattcaagatccgccactgat 49915857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 754
Target Start/End: Complemental strand, 16632186 - 16632109
Alignment:
Q  677 tatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||| |||||||| || || ||||||||| ||||||||| |||||| || | |||| |  ||||||||||||||||    
T  16632186 tatattttttgaaactttatagtatatattctacaaatattaggcacctccgagaaataaactcaagatccgccactg 16632109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 754
Target Start/End: Original strand, 25244867 - 25244924
Alignment:
Q  697 aatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||||||||| ||||||||||||||||||||| |||  |  | ||||||||||||||    
T  25244867 aatatatattctacaaatatttggcacccccaacaaaataagttaagatccgccactg 25244924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 36565847 - 36565778
Alignment:
Q  249 caggggcggatctctttagaga-ccccaggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    |||||||||||||||||  ||| |||||||||| ||||||||| |||   ||||||||||| ||||||||    
T  36565847 caggggcggatctctttgaagatccccaggtgccactgcaccccccagattttatataaatttcatatta 36565778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 3e-41; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 26056537 - 26056420
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  26056537 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 26056439  T
Q  230 gataatgaaccatgacatt 248  Q
    |||||||||||||||||||    
T  26056438 gataatgaaccatgacatt 26056420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 26065896 - 26065779
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  26065896 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 26065798  T
Q  230 gataatgaaccatgacatt 248  Q
    |||||||||||||||||||    
T  26065797 gataatgaaccatgacatt 26065779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 12857192 - 12857075
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  12857192 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 12857094  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  12857093 aataatgaaccatgacatt 12857075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 26051424 - 26051307
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  26051424 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 26051326  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  26051325 aataatgaaccatgacatt 26051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 26060783 - 26060666
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  26060783 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 26060685  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  26060684 aataatgaaccatgacatt 26060666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 12852079 - 12851962
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||  ||     
T  12852079 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattgttacattattatttat-tatt 12851981  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  12851980 aataatgaaccatgacatt 12851962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 463 - 580
Target Start/End: Original strand, 4038501 - 4038618
Alignment:
Q  463 agttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgaga 562  Q
    |||||||||||  ||  |||||||| |||||| ||||||||||  ||||||||||||||| || |||||||||||||| ||||||||||| |||||||||    
T  4038501 agttaaaatcatgcaactgcaccactacaccaatttacaatatcctatattgtttgaaactttataatatatattccagaaatatctggcgcccccgaga 4038600  T
Q  563 aatgatatcaagatccgc 580  Q
    ||| |  |||||||||||    
T  4038601 aataaactcaagatccgc 4038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 14610698 - 14610615
Alignment:
Q  164 gaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||    
T  14610698 gaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tattaataatgaaccatgacatt 14610615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 12851969 - 12851894
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  12851969 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaagt 12851894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 12857082 - 12857007
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  12857082 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 12857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 14610622 - 14610547
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  14610622 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 14610547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 26051314 - 26051239
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  26051314 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 26051239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 26056427 - 26056352
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  26056427 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 26056352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 26060673 - 26060598
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  26060673 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 26060598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 26065786 - 26065711
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  26065786 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 26065711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 632 - 754
Target Start/End: Original strand, 4038501 - 4038623
Alignment:
Q  632 agttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaata 731  Q
    |||||||||||  ||  |||||||| |||||| ||||||||||  ||||||||||||||| || |||||||||||||| |||||| |||| ||||| | |    
T  4038501 agttaaaatcatgcaactgcaccactacaccaatttacaatatcctatattgtttgaaactttataatatatattccagaaatatctggcgcccccgaga 4038600  T
Q  732 aatgatttcaagatccgccactg 754  Q
    ||| |  ||||||||||||||||    
T  4038601 aataaactcaagatccgccactg 4038623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 489 - 580
Target Start/End: Original strand, 23328915 - 23329006
Alignment:
Q  489 acaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||||||||||||| ||||||||||  ||||||| ||||| ||||||||| |||||||| |||||||| |||||||| |  |||||||||||    
T  23328915 acaccagtttacaaaattgtatatttcttgaaactttttagtatatattctacaaatatttggcaccctcgagaaataaactcaagatccgc 23329006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 23328915 - 23329008
Alignment:
Q  658 acaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||||||||||||| ||||||||||  ||||||| ||||| ||||||||| ||||||||||||||||| | | |||| |  |||||||||||||    
T  23328915 acaccagtttacaaaattgtatatttcttgaaactttttagtatatattctacaaatatttggcaccctcgagaaataaactcaagatccgcca 23329008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 652 - 753
Target Start/End: Complemental strand, 49016910 - 49016809
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| ||||||| |||||||||||||||||  |||||||||||||| ||||||||| | || |||||| ||||||| | |||| |  |||||||||| ||    
T  49016910 accatcacaccaatttacaatattgtatatattttgaaacgttttagtatatattctaaaactatttgacacccccgaaaaataaactcaagatccgtca 49016811  T
Q  752 ct 753  Q
    ||    
T  49016810 ct 49016809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 2248853 - 2248909
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||    
T  2248853 tgttggtgatttctaaaataatggaatcactttagaaccaaaagtagtaactcttca 2248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 483 - 579
Target Start/End: Complemental strand, 49016910 - 49016814
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccg 579  Q
    |||| ||||||| |||||||||||||||||  |||||||||||||| ||||||||| | || ||| || ||||||||| |||| |  ||||||||||    
T  49016910 accatcacaccaatttacaatattgtatatattttgaaacgttttagtatatattctaaaactatttgacacccccgaaaaataaactcaagatccg 49016814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 49017104 - 49017022
Alignment:
Q  248 tcaggggcggatctctttagaga-ccccaggtgctactgca-ccctccaacgtttatataaatatcatattaggcatgacatt 328  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||| ||| | |||||||||||| |||||||| ||| |||||    
T  49017104 tcaggggcggatctctttagagacccccaggtgccactgcacccccccagcatttatataaatagcatattagccataacatt 49017022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 761 - 830
Target Start/End: Original strand, 5440217 - 5440286
Alignment:
Q  761 ttgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||| ||||||||||||| ||||| ||||| ||| ||||| ||||||||||||| |||| ||||||||    
T  5440217 ttgatttaagtgtatatggtcataacttttgggaaaggggtgattaatgaaccataacattgattcaagt 5440286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 761 - 830
Target Start/End: Original strand, 5449227 - 5449296
Alignment:
Q  761 ttgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||| ||||||||||||| ||||| ||||| ||| ||||| ||||||||||||| |||| ||||||||    
T  5449227 ttgatttaagtgtatatggtcataacttttgggaaaggggtgattaatgaaccataacattgattcaagt 5449296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 44970071 - 44970151
Alignment:
Q  249 caggggcggatctctttagagac-cccaggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacatt 328  Q
    |||||||||||||||| |||||| ||||||||| ||||||||| |||   | ||||||||| |||||||| ||||||||||    
T  44970071 caggggcggatctcttcagagactcccaggtgccactgcaccccccagtttatatataaatttcatattatgcatgacatt 44970151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 4181276 - 4181330
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactctt 184  Q
    |||||||||||||||||||||| |||||| |||| || ||||||||| |||||||    
T  4181276 tgttggtgatttccaaaataatggaatcactttaaaatcaaaagttgcaactctt 4181330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 23328648 - 23328718
Alignment:
Q  255 cggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatga 324  Q
    |||||||||||||||||||| |||||| |||||||||  || | |||||| |||| |||||||||||||||    
T  23328648 cggatctctttagagacccccaggtgccactgcacccctcagcctttatacaaatgtcatattaggcatga 23328718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 727
Target Start/End: Complemental strand, 11907642 - 11907589
Alignment:
Q  674 ttgtatattgtttgaaacgttttaatatatattccacaaatatttggcaccccc 727  Q
    ||||||||| |||||||||||||| ||||| ||| | |||||||||||||||||    
T  11907642 ttgtatattttttgaaacgttttagtatatgttctaaaaatatttggcaccccc 11907589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 678 - 754
Target Start/End: Complemental strand, 12467650 - 12467574
Alignment:
Q  678 atattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||| ||||||||  |||||||||||||||| | || |||||||||||||| || | |  ||||||||||||||||    
T  12467650 atattttttgaaaccatttaatatatattccatatatgtttggcacccccaacaatttaactcaagatccgccactg 12467574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 724
Target Start/End: Original strand, 17756831 - 17756903
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacc 724  Q
    ||||||||||||||| |||||  || | ||| ||||||||  ||||||||||||||  |||||||||||||||    
T  17756831 accaccacaccagttaacaatgatgcacattttttgaaactgtttaatatatattcttcaaatatttggcacc 17756903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 27400248 - 27400327
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatgacatt 328  Q
    ||||| |||||||||| ||||||||| |||||  ||||||||| ||||| |||||||||||| |||||||| ||| |||||    
T  27400248 cagggacggatctcttcagagacccccaggtgtcactgcaccc-ccaacatttatataaatagcatattagccataacatt 27400327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 328
Target Start/End: Complemental strand, 11907820 - 11907738
Alignment:
Q  249 caggggcggatctctttagagac-cccaggtgctactgcaccctccaac--gtttatataaatatcatattaggcatgacatt 328  Q
    |||||||||||||||| |||||| ||||||||| ||||||||| |||||   |||||||||||| || ||||| ||| |||||    
T  11907820 caggggcggatctcttcagagactcccaggtgccactgcaccccccaacatttttatataaatagcacattagccataacatt 11907738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 21809368 - 21809295
Alignment:
Q  249 caggggcggatctctttagagaccc-caggtgctactgcaccctccaacgtttatataaatatcatattaggcat 322  Q
    ||||||||||||||||| |||| || ||||||| ||||||||| |||   || ||||||||||||||||||||||    
T  21809368 caggggcggatctctttggagatcctcaggtgccactgcaccc-ccagttttgatataaatatcatattaggcat 21809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 754
Target Start/End: Original strand, 30682584 - 30682654
Alignment:
Q  684 tttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    ||||||||  |||||||| |||||||||||||||||||||| |||| |||  |  |||||||| |||||||    
T  30682584 tttgaaactgtttaatatttattccacaaatatttggcacctccaacaaaataactcaagatctgccactg 30682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 804 - 866
Target Start/End: Original strand, 35352221 - 35352283
Alignment:
Q  804 ttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||||||| |||| |||| |||||||||||||| |||||||  ||||  ||||||||||||||    
T  35352221 ttaatgaatcataacattgattcaagtgtatataatcataacctttgataaatgggtgcttaa 35352283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 1076140 - 1076071
Alignment:
Q  249 caggggcggatctctttagaga-ccccaggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    ||||||||||||||||| |||| |||||| ||| ||||||||| |||   ||||||||||| ||||||||    
T  1076140 caggggcggatctctttggagacccccagatgccactgcaccccccagtttttatataaatttcatatta 1076071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 4038363 - 4038424
Alignment:
Q  249 caggggcggatctctttagagaccc-caggtgctactgcaccctccaacgtttatataaata 309  Q
    ||||||||||||||| ||||||||| || |||| ||||||||| ||||  ||||||||||||    
T  4038363 caggggcggatctctgtagagacccacatgtgccactgcacccaccaaattttatataaata 4038424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 11907642 - 11907589
Alignment:
Q  505 ttgtatattgtttgaaacgttttaatatatattccacaaatatctggcaccccc 558  Q
    ||||||||| |||||||||||||| ||||| ||| | |||||| ||||||||||    
T  11907642 ttgtatattttttgaaacgttttagtatatgttctaaaaatatttggcaccccc 11907589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 560
Target Start/End: Original strand, 17756831 - 17756908
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccga 560  Q
    ||||||||||||||| |||||  || | ||| ||||||||  ||||||||||||||  ||||||| ||||||| ||||    
T  17756831 accaccacaccagttaacaatgatgcacattttttgaaactgtttaatatatattcttcaaatatttggcacctccga 17756908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 754
Target Start/End: Original strand, 21267826 - 21267895
Alignment:
Q  685 ttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||  |||||||||||||| | | | ||||||||||||||| || | | |||||||||||||||||    
T  21267826 ttgaaaccatttaatatatattctatagaaatttggcacccccaagaatttaattcaagatccgccactg 21267895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 7e-39; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 9872225 - 9872342
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  9872225 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 9872323  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  9872324 aataatgaaccatgacatt 9872342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 9877340 - 9877457
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  9877340 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 9877438  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  9877439 aataatgaaccatgacatt 9877457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 39904248 - 39904131
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||     
T  39904248 tgttggtgatttccaaaataattgaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat-tatt 39904150  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  39904149 aataatgaaccatgacatt 39904131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 755 - 866
Target Start/End: Complemental strand, 2023305 - 2023194
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaa 854  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||  |||| |||    
T  2023305 atgacattgattcaagtgtgtatggttataacctttggcaaaagggtgcttaatgaatcataacattgattcaagtgtatatgatcataacctttgacaa 2023206  T
Q  855 atgggtgcttaa 866  Q
    ||||||| ||||    
T  2023205 atgggtgtttaa 2023194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 39909361 - 39909244
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||  || |||||||||| ||||||||||||||||||||  ||     
T  39909361 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcgtgtaaaccattcatatacattggaacattattatttat-tatt 39909263  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  39909262 aataatgaaccatgacatt 39909244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 13556105 - 13556187
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    |||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  13556105 tgttggtgatttccaaaataatggaatcactttaaaaccaagagttgtaactcttcatgggaatctttcatatacattggaac 13556187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 43540564 - 43540620
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43540564 tgttggtgatttccaaaataattgaatcaatttagaaccaaaagttgtaactcttca 43540620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 9872335 - 9872410
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  9872335 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 9872410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 9877450 - 9877525
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  9877450 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 9877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 24091794 - 24091869
Alignment:
Q  135 gtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattgga 210  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| ||||| |||||||| ||||||    
T  24091794 gtgatttccaaaataatagaatcactttagaaccaagagttgtaactctttatgagaatctttcatatacattgga 24091869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 759 - 850
Target Start/End: Original strand, 35368757 - 35368848
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttg 850  Q
    |||||||| ||||||||||| ||||||| |||| ||||  ||||||||||||||| || |||| |||||||||||||||||||||| |||||    
T  35368757 cattgatttaagtgtatatgattataacctttgacaaagaggtgcttaatgaaccttagcattgattcaagtgtatatgatcataacatttg 35368848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 39909251 - 39909176
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  39909251 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 39909176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 652 - 755
Target Start/End: Complemental strand, 4428776 - 4428673
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    ||||||||||||||| ||||||||| ||||| ||| ||||  ||||||||||||||  |||||||||||||||||| | |||  | |||||||||| |||    
T  4428776 accaccacaccagttaacaatattgaatattttttaaaactgtttaatatatattcttcaaatatttggcacccccgaaaaaaaaattcaagatccacca 4428677  T
Q  752 ctga 755  Q
    ||||    
T  4428676 ctga 4428673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 759 - 830
Target Start/End: Original strand, 13556219 - 13556290
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||| |||| ||||||||    
T  13556219 cattgattcaagtgtatatgattataacctttggcaaaaaggtgcttaatgaatcatagcattgattcaagt 13556290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 39904138 - 39904063
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||| |||  |||| ||||||||    
T  39904138 atgacattgattcaagtatatatggttataacctttggcaaaatagtgcttaatgaatcatggcattgattcaagt 39904063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 652 - 754
Target Start/End: Complemental strand, 20645687 - 20645585
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| |||| || |||||||| ||||||||| |||||||| ||||| ||||||||| ||||||||||||||| ||  | |||| |  |||||||||||||    
T  20645687 accatcacatcaatttacaattttgtatattctttgaaacattttagtatatattctacaaatatttggcactccttagaaataaactcaagatccgcca 20645588  T
Q  752 ctg 754  Q
    |||    
T  20645587 ctg 20645585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 2024411 - 2024354
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaacattattattta 223  Q
    ||||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  2024411 accaagagttgtaactcttcacgggaaccattcatatacattggaacattattattta 2024354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 4428776 - 4428699
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccga 560  Q
    ||||||||||||||| ||||||||| ||||| ||| ||||  ||||||||||||||  ||||||| ||||||||||||    
T  4428776 accaccacaccagttaacaatattgaatattttttaaaactgtttaatatatattcttcaaatatttggcacccccga 4428699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 37023038 - 37022969
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| ||||| |||||||||||| |||||||    
T  37023038 caggggcggatctcttcagagacccccaggtgccactgcaccccccaacatttatataaataacatatta 37022969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 2024467 - 2024420
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgt 177  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  2024467 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgt 2024420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 14028370 - 14028295
Alignment:
Q  250 aggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatattaggcatga 324  Q
    |||||||||||||||| |||||||| |||||| ||||||||| |||   || ||||||||||||||||||||||||    
T  14028370 aggggcggatctctttggagacccccaggtgcaactgcaccccccagttttaatataaatatcatattaggcatga 14028295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 633 - 724
Target Start/End: Complemental strand, 16967217 - 16967126
Alignment:
Q  633 gttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacc 724  Q
    |||| |||||| || ||| || || |||||||||||| ||| | |||||| ||||||||  |||||||||||||| ||||||||||||||||    
T  16967217 gttacaatcaagcaattgtacgactacaccagtttactatactatatattttttgaaaccgtttaatatatattcaacaaatatttggcacc 16967126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 684 - 754
Target Start/End: Complemental strand, 37022856 - 37022786
Alignment:
Q  684 tttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||||| ||||||||| | || |||||||||||||||| |||| |  ||||||||||||||||    
T  37022856 tttgaaacgttttagtatatattctaaaactatttggcacccccaagaaataaactcaagatccgccactg 37022786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 483 - 580
Target Start/End: Complemental strand, 20645687 - 20645590
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||| |||| || |||||||| ||||||||| |||||||| ||||| ||||||||| |||||||| |||||| ||  |||||| |  |||||||||||    
T  20645687 accatcacatcaatttacaattttgtatattctttgaaacattttagtatatattctacaaatatttggcactccttagaaataaactcaagatccgc 20645590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 2023243 - 2023171
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | ||||| |||| |||| ||||| |||||||| |||| |||| ||||||||    
T  2023243 acattgattcaagtgtatatgatcataacctttgacaaatgggtgtttaatgaatcataacattgattcaagt 2023171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 560
Target Start/End: Complemental strand, 16967217 - 16967121
Alignment:
Q  464 gttaaaatcaaacatttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccga 560  Q
    |||| |||||| || ||| || || |||||||||||| ||| | |||||| ||||||||  |||||||||||||| |||||||| ||||||| ||||    
T  16967217 gttacaatcaagcaattgtacgactacaccagtttactatactatatattttttgaaaccgtttaatatatattcaacaaatatttggcacctccga 16967121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 43401906 - 43401950
Alignment:
Q  162 tagaaccaaaagttgtaactcttcatgggaatcattcatatatat 206  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  43401906 tagaaccaaaagttgtaactcatcatggaaatcattcatatatat 43401950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 4556018 - 4555967
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaact 181  Q
    |||||||||||||||||||||| |||||| |||||||  |||||||||||||    
T  4556018 tgttggtgatttccaaaataatggaatcactttagaattaaaagttgtaact 4555967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 759 - 830
Target Start/End: Original strand, 35368816 - 35368887
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| | ||||||||||  |||| |||| |||||||| |||| |||| ||||||||    
T  35368816 cattgattcaagtgtatatgatcataacatttgataaaaaggtgtttaatgaatcataacattgattcaagt 35368887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 758 - 865
Target Start/End: Complemental strand, 43379732 - 43379625
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatg 857  Q
    ||||||||| ||| ||||||| | ||||| ||||| |||  | || |||||||||| || |||| ||||||||||||||||||||||  ||||| ||| |    
T  43379732 acattgatttaagcgtatatgatcataacttttggtaaagtgatgtttaatgaaccgtagcattgattcaagtgtatatgatcataaactttggtaaaag 43379633  T
Q  858 ggtgctta 865  Q
     |||||||    
T  43379632 agtgctta 43379625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 28480763 - 28480713
Alignment:
Q  274 caggtgctactgcaccctccaacgtttatataaatatcatattaggcatga 324  Q
    ||||||| ||||||||  ||||| |||||||||||||||||||||||||||    
T  28480763 caggtgccactgcacctcccaacttttatataaatatcatattaggcatga 28480713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 760 - 830
Target Start/End: Original strand, 43540699 - 43540768
Alignment:
Q  760 attgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||| | ||||| |||| ||||| |||||||||||||||||| |||| | ||||||    
T  43540699 attgattcaagtgtatatgatcataacctttgacaaaa-ggtgcttaatgaaccataacattgactcaagt 43540768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 4428955 - 4428886
Alignment:
Q  249 caggggcggatctctttagagacccc-aggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    ||||||||||||||||| |||||||| |||||| ||||||||| |||   ||||||||||| ||||||||    
T  4428955 caggggcggatctctttggagacccctaggtgccactgcaccccccagattttatataaatttcatatta 4428886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 19645457 - 19645518
Alignment:
Q  694 tttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactga 755  Q
    |||||||||||||||| |||  |||||||||||||| |||| |  |||||||||||||||||    
T  19645457 tttaatatatattccataaaagtttggcacccccaacaaattaactcaagatccgccactga 19645518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 20645910 - 20645836
Alignment:
Q  249 caggggcggatctctttagagacccca-ggtgctactgcaccctccaacgtttatataaatatcatattaggcatga 324  Q
    |||||||| |||||||||||||||||  ||||| |||||||||  || | ||||||||||||| |||||||||||||    
T  20645910 caggggcgaatctctttagagaccccctggtgccactgcaccc--cagcctttatataaatatgatattaggcatga 20645836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 698 - 758
Target Start/End: Complemental strand, 2866820 - 2866760
Alignment:
Q  698 atatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactgatga 758  Q
    |||||||||| | ||||||||||||||||||  |||  | |||||||||||||||||||||    
T  2866820 atatatattctaaaaatatttggcacccccagaaaaaaagttcaagatccgccactgatga 2866760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 4555960 - 4555880
Alignment:
Q  168 caaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgatagataatgaaccatgacatt 248  Q
    |||||||| || ||||||| || ||||||||||||| |||| || |||||||||||   ||||||| |||||||| |||||    
T  4555960 caaaagttatacctcttcacggaaatcattcatatacattgaaaaattattatttacttatagatagtgaaccataacatt 4555880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 694 - 754
Target Start/End: Original strand, 16717204 - 16717264
Alignment:
Q  694 tttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactg 754  Q
    |||||||||||||||| |||  |||||||||||||| |||| |  ||||||||||||||||    
T  16717204 tttaatatatattccataaaagtttggcacccccaacaaattaactcaagatccgccactg 16717264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 788 - 844
Target Start/End: Original strand, 43540668 - 43540724
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataa 844  Q
    ||||||||| |||||||||||||| | ||  ||| ||||||||||||||||||||||    
T  43540668 tttggcaaaggggtgcttaatgaatcttagtattgattcaagtgtatatgatcataa 43540724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 35368621 - 35368680
Alignment:
Q  128 tatgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcat 187  Q
    ||||||||| ||||| |||| ||| |||||| ||||||| |||||||||||||| |||||    
T  35368621 tatgttggtaatttctaaaagaatggaatcactttagaatcaaaagttgtaacttttcat 35368680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 43379672 - 43379601
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||||||||||||||||| | ||||  ||||| ||||| ||||||| |||| |||| |||| ||||||||    
T  43379672 cattgattcaagtgtatatgatcataaactttggtaaaagagtgcttagtgaatcataacattgattcaagt 43379601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 788 - 866
Target Start/End: Original strand, 13556189 - 13556267
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    |||||||||  ||||||||||||||  |  |||| ||||||||||||||||| ||||  |||||||||  |||||||||    
T  13556189 tttggcaaataggtgcttaatgaacatttgcattgattcaagtgtatatgattataacctttggcaaaaaggtgcttaa 13556267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 788 - 866
Target Start/End: Original strand, 35368727 - 35368805
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaatgggtgcttaa 866  Q
    ||||||||| | |||||||||||||| || |||| ||| ||||||||||||| ||||  |||| ||||  |||||||||    
T  35368727 tttggcaaatgagtgcttaatgaaccttagcattgatttaagtgtatatgattataacctttgacaaagaggtgcttaa 35368805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 43540620 - 43540666
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| |||||||||||||||||| ||| ||||||||| ||||||||    
T  43540620 accaagagttgtaactcttcatggtaattattcatatacattggaac 43540666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 2023331 - 2023298
Alignment:
Q  215 tattatttatcgatagataatgaaccatgacatt 248  Q
    |||||||||| |||||||||||||||||||||||    
T  2023331 tattatttattgatagataatgaaccatgacatt 2023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 730
Target Start/End: Complemental strand, 14028110 - 14028045
Alignment:
Q  665 tttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaat 730  Q
    ||||| |||||||||||| || |||||  ||||||||||| | || ||||||||| ||||||||||    
T  14028110 tttactatattgtatattcttggaaaccgtttaatatataattcataaatatttgacacccccaat 14028045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 580
Target Start/End: Complemental strand, 37022856 - 37022791
Alignment:
Q  515 tttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||||||||||||| ||||||||| | || ||| |||||||||| |||||| |  |||||||||||    
T  37022856 tttgaaacgttttagtatatattctaaaactatttggcacccccaagaaataaactcaagatccgc 37022791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 1820 - 1937
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttcatgggaatcattcatatatattggaacattattatttatcgata 229  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||| |||||||  ||     
T  1820 tgttggtgattttcaaaataatggaatcactttagaaccaaaagttgtatctcttcatgggaaccattcatatacattggaacattactatttat-tatt 1918  T
Q  230 gataatgaaccatgacatt 248  Q
     ||||||||||||||||||    
T  1919 aataatgaaccatgacatt 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 755 - 830
Target Start/End: Original strand, 1930 - 2005
Alignment:
Q  755 atgacattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||| ||||||||    
T  1930 atgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 51; Significance: 9e-20; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 652 - 754
Target Start/End: Original strand, 230547 - 230649
Alignment:
Q  652 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgcca 751  Q
    |||| ||||||||||| ||| ||| |||||| |||||||||||||| ||||||||| | || |||||||||||||||| |||| |  |||||||||||||    
T  230547 accatcacaccagtttgcaaaattatatattttttgaaacgttttagtatatattctaaaactatttggcacccccaagaaataaactcaagatccgcca 230646  T
Q  752 ctg 754  Q
    |||    
T  230647 ctg 230649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 144491 - 144437
Alignment:
Q  132 ttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  144491 ttggtaatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 580
Target Start/End: Original strand, 230547 - 230644
Alignment:
Q  483 accaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatctggcacccccgagaaatgatatcaagatccgc 580  Q
    |||| ||||||||||| ||| ||| |||||| |||||||||||||| ||||||||| | || ||| |||||||||| |||||| |  |||||||||||    
T  230547 accatcacaccagtttgcaaaattatatattttttgaaacgttttagtatatattctaaaactatttggcacccccaagaaataaactcaagatccgc 230644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 230291 - 230359
Alignment:
Q  249 caggggcggatctctttagaga-ccccaggtgctactgcaccctccaacgtttatataaatatcatatta 317  Q
    |||||||||||||||||||||| |||||||||  ||||||||| ||||| |||||||||||| |||||||    
T  230291 caggggcggatctctttagagacccccaggtgtcactgcaccc-ccaacatttatataaatagcatatta 230359  T

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Target: scaffold0006; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 144359 - 144288
Alignment:
Q  759 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    |||||| |||||||| |||| | |||||  ||||||||||||| |||||||||||||| |||| ||||||||    
T  144359 cattgactcaagtgtgtatgatcataacccttggcaaaagggtacttaatgaaccataacattgattcaagt 144288  T

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Target: scaffold0005 (Bit Score: 48; Significance: 6e-18; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 855
Target Start/End: Complemental strand, 173662 - 173595
Alignment:
Q  788 tttggcaaaagggtgcttaatgaaccatatcattaattcaagtgtatatgatcataagatttggcaaa 855  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||||||| ||||| ||||    
T  173662 tttggcaaaagggtgcttaatgaaccttaacattgattcaagtgtatatgatcataacatttgacaaa 173595  T

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Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 173766 - 173710
Alignment:
Q  130 tgttggtgatttccaaaataatagaatcaatttagaaccaaaagttgtaactcttca 186  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  173766 tgttggtgatttacaaaataattgaatcactttagaaccaaaagttgtaactcttca 173710  T

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Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 830
Target Start/End: Complemental strand, 173633 - 173561
Alignment:
Q  758 acattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccatatcattaattcaagt 830  Q
    ||||||||||||||||||||| | |||||||||| |||| | ||| |||||||||| || |||| ||||||||    
T  173633 acattgattcaagtgtatatgatcataacatttgacaaaggagtgtttaatgaaccttagcattgattcaagt 173561  T

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Target: scaffold0005; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 173710 - 173664
Alignment:
Q  166 accaaaagttgtaactcttcatgggaatcattcatatatattggaac 212  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  173710 accaagagttgtaactattcatgggaatcattcatatacattggaac 173664  T

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Target: scaffold0542 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 9739 - 9678
Alignment:
Q  694 tttaatatatattccacaaatatttggcacccccaataaatgatttcaagatccgccactga 755  Q
    ||||||||||||||||||||||||||||||||||||    |  |||||||||||||||||||    
T  9739 tttaatatatattccacaaatatttggcacccccaaatttttctttcaagatccgccactga 9678  T

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Target: scaffold0542; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Complemental strand, 9739 - 9706
Alignment:
Q  525 tttaatatatattccacaaatatctggcaccccc 558  Q
    ||||||||||||||||||||||| ||||||||||    
T  9739 tttaatatatattccacaaatatttggcaccccc 9706  T

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Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 755
Target Start/End: Complemental strand, 47338 - 47228
Alignment:
Q  645 catttgcaccaccacaccagtttacaatattgtatattgtttgaaacgttttaatatatattccacaaatatttggcacccccaataaatgatttcaaga 744  Q
    |||||| ||||| |||| ||||||| ||  |||| ||| |||||||   ||||||||||||| || ||||||||||||||||| ||   |  ||||||||    
T  47338 catttgtaccactacactagtttactatggtgtacattatttgaaaacgtttaatatatatttcataaatatttggcacccccgattttttttttcaaga 47239  T
Q  745 tccgccactga 755  Q
    |||||||||||    
T  47238 tccgccactga 47228  T

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