View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4493-Insertion-10 (Length: 482)
Name: NF4493-Insertion-10
Description: NF4493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4493-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 7 - 482
Target Start/End: Original strand, 43331208 - 43331683
Alignment:
| Q |
7 |
ataagtatatagtaagaacaataagtgatttatactatactttgaataagctctaggagccgtttgaattttgatgatgtgtagattctggtcccttcac |
106 |
Q |
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| T |
43331208 |
ataagtatatagtaagaacaataagtgatttatactatactttgaataagctctaggagccgtttgaattttgatgatgtgtagattatgttcccttcac |
43331307 |
T |
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| Q |
107 |
cttagaccattgatttagttttcatatagccggctaaattgtttttaattatgtgaccaaaattatttgcctaattaaggtactctaagtagcttttatt |
206 |
Q |
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| T |
43331308 |
cttagaccattgatttagttttcatatagccggctaaattgtttttaattatgtgaccaaaattgtttgcctaattaaggtactctaagtaacttttatt |
43331407 |
T |
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| Q |
207 |
atttatatcattccttttgtggtagccatgtggctcctttttcatcacctcttgttacttttccctcctttctttcttgataagaacattgtcgcctaac |
306 |
Q |
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| T |
43331408 |
atttatatcattccttttgtggtagccatgtggctcctttttcatcacctcttgttacttttccctcctttctttcttgataagaacattgtcgcctaac |
43331507 |
T |
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| Q |
307 |
caacaattttatacattgcataaatgcaaaaccatatataatcattgaccactaactaaaaagagaggccttttataaaatcaatttgataaagatagag |
406 |
Q |
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| T |
43331508 |
caacaattttatacattgcataaatgcaaaaccatatataatcattgaccactaactaaaaagagaggccttttataaaatcaatttgataaagatagag |
43331607 |
T |
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| Q |
407 |
gaaaggaccacacattcttgttttagagtgattttaaccgaacactgaacactcataaacttttttcttagattgg |
482 |
Q |
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| T |
43331608 |
gaaaggaccacacatccttgttttagagtgattttaaccgaacactgaacactcataaacttttttcttagattgg |
43331683 |
T |
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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 157
Target Start/End: Original strand, 1048458 - 1048489
Alignment:
| Q |
126 |
tttcatatagccggctaaattgtttttaatta |
157 |
Q |
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| T |
1048458 |
tttcatatagccggctaaattgtttttaatta |
1048489 |
T |
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