View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4494-Insertion-4 (Length: 664)
Name: NF4494-Insertion-4
Description: NF4494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4494-Insertion-4 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 548; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 548; E-Value: 0
Query Start/End: Original strand, 15 - 635
Target Start/End: Original strand, 30774750 - 30775372
Alignment:
| Q |
15 |
agcagtaccatatccttttgtcatcttcacaggtagagaagtattcctaggaattaccacatccatggtgcctcgattcactgaaataccaagcgacaaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||| |
|
|
| T |
30774750 |
agcagtaccatatccttttgtcatcttcacaggtagagaagtattcctaggaattaccacatccatggtgtcttgattcactgaaataccaagtgacaaa |
30774849 |
T |
 |
| Q |
115 |
ggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30774850 |
ggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggat |
30774949 |
T |
 |
| Q |
215 |
tgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctac |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30774950 |
tgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctac |
30775049 |
T |
 |
| Q |
315 |
actactcttgtccacctttgaatcagtaaaacaactcttaacagtc--tatacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtg |
412 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30775050 |
actactcttgtctacctttgaatcagtaagacaactctcaacagtctgtatacactcattaaaaaggtccatattgatttcctcaaacttgacacgagtg |
30775149 |
T |
 |
| Q |
413 |
attgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttc |
512 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30775150 |
attgatgaagaaaagtcaatgtcttgaaataaattatctatctcaacaaatgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttc |
30775249 |
T |
 |
| Q |
513 |
tcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctc |
612 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30775250 |
tcaactgtctcaaagctcttggattcccggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtaattcaacattctgttatcaaagtcctc |
30775349 |
T |
 |
| Q |
613 |
tcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
30775350 |
tcccccgatgtgagtgtttccag |
30775372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 101 - 445
Target Start/End: Original strand, 35132040 - 35132387
Alignment:
| Q |
101 |
taccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaac |
200 |
Q |
| |
|
||||||| |||||||| || ||||| | | |||||||||||| |||| || ||||||| |||||| | ||||||||| || |||||||| | || || |
|
|
| T |
35132040 |
taccaagagacaaaggtgtaacatcctgtaacaccaactttggaacattttttatgcctttactcaacaaagcagcctgaactgctgccccataagctac |
35132139 |
T |
 |
| Q |
201 |
tgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaaga |
300 |
Q |
| |
|
|||||||| || || |||||||||||||| |||||||| ||||| || || ||||||| | |||||||||||||||||||||||| || || |||||| |
|
|
| T |
35132140 |
agcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaaga |
35132239 |
T |
 |
| Q |
301 |
acaatatcatctacac-tactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
|||| ||||||||| | | |||||||||| ||| | |||| | | |||||||| || || | ||||||| ||||||||||| ||| ||||||||| |
|
|
| T |
35132240 |
acaacatcatctacccttgctcttgtccatcttagcatcaatgagacaactctctacggtattcatacactcattaaaaaggtctgcattcatttcctca |
35132339 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaa |
445 |
Q |
| |
|
|||||| | || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
35132340 |
aacttggcgcgattgattgatgaagaaaaatcaatgccttgaaataaa |
35132387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 100 - 429
Target Start/End: Complemental strand, 9336476 - 9336145
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| |||||||| || || |||||||||| |||||||||||| | |||||| || |||||||| || | || || |
|
|
| T |
9336476 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttgggcgcattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaa |
9336377 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| |||||||| || ||||| | | || | || |||||||| ||||| || | |||||||||| |||||||| ||||||||||| || ||||| ||||| |
|
|
| T |
9336376 |
cagcctcatctgggttgatacccatgaataattccttccccttgaaaaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaag |
9336277 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
|||||||||||| | | ||||||||| | ||||||||| | | ||| | | |||| | | ||||||| || |||| |||||| || | ||||||| |
|
|
| T |
9336276 |
aacaatatcatcaatattactcttgtatatctttgaatccctgagacaggtgtcaacaatattcatacactcattgaaaaagtccatgttaagttcctca |
9336177 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtc |
429 |
Q |
| |
|
|| ||| || |||||||||||||||||||||| |
|
|
| T |
9336176 |
aatttggcacgagtgattgatgaagaaaagtc |
9336145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 543 - 633
Target Start/End: Original strand, 35132476 - 35132566
Alignment:
| Q |
543 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttcc |
633 |
Q |
| |
|
||||||| || |||||||| |||| || || | |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
35132476 |
taatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttcc |
35132566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 23597068 - 23596953
Alignment:
| Q |
202 |
gcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaa |
301 |
Q |
| |
|
||||||||||| ||||||||||| || | ||||||||||||||||||| |||| |||| || || ||||||||||||| || || || ||||||| |
|
|
| T |
23597068 |
gcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaa |
23596969 |
T |
 |
| Q |
302 |
caatatcatctacact |
317 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
23596968 |
caacatcatcaacact |
23596953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 310
Target Start/End: Complemental strand, 23588257 - 23588108
Alignment:
| Q |
161 |
cactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatag |
260 |
Q |
| |
|
||||||| | |||||| ||||| |||||||| | | ||| || ||||| || ||||||||||| || | ||||| ||||||||||||| |||| || |
|
|
| T |
23588257 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
23588158 |
T |
 |
| Q |
261 |
ttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcat |
310 |
Q |
| |
|
|| || || ||||||||||||| || ||||| |||||||||| ||||| |
|
|
| T |
23588157 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacatcat |
23588108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 100 - 638
Target Start/End: Complemental strand, 16662577 - 16662037
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| ||||| ||||| || |||||||||||||| ||||| ||| |||||||||||||||||| | |||||| || ||||||||||| | || || |
|
|
| T |
16662577 |
ataccaagtgacaatggggtaacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaa |
16662478 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||||| || || |||||||| |
|
|
| T |
16662477 |
cagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaag |
16662378 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
||||||||||| ||||| | |||||||| ||||||||| ||||||||||| |||| ||| ||||||| |||||||||| ||||||||||||| ||| |
|
|
| T |
16662377 |
aacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggcccatattgatttcttca |
16662278 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcct |
497 |
Q |
| |
|
||||||||| |||||| ||||| ||| ||||||||| | | |||||| ||| ||||||| | |||| || ||||| |||||||||||||| |||| |
|
|
| T |
16662277 |
aacttgacacgagtgagtgatgtagagaagtcaatgtcctcgtataaataatcaatctcaatagcggtgaccaatttgaaagagagtgtccttttcgcct |
16662178 |
T |
 |
| Q |
498 |
tttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattct |
597 |
Q |
| |
|
||||||| | |||||||||| ||||| |||||||||| | || || ||||| ||||||||| | |||||||| | |||||||||||||||||||| |
|
|
| T |
16662177 |
tttcacaagaagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattct |
16662078 |
T |
 |
| Q |
598 |
gttatcaaagtcctctcccccgatgtgagtgtttccagaag |
638 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16662077 |
gttatcaaagtcctctcccccgaggtgagtgtttccagaag |
16662037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 100 - 633
Target Start/End: Complemental strand, 16658102 - 16657567
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||||||||| ||||| ||||||| || |||||| | |||| ||||||||| |||||||||||| | |||||| || |||||||| |||| || || |
|
|
| T |
16658102 |
ataccaagcgacaatggggtaacatctctcaacaccaaatctgggacattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaa |
16658003 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| || ||||| || ||||| || ||||| |||||||| || ||||| || | ||||||| ||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
16658002 |
cagcttcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaag |
16657903 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
||||| ||||| | | || ||| || |||||||||| || |||| ||| |||||| | ||||||| || ||||| |||||||| ||||||||| |
|
|
| T |
16657902 |
aacaacgtcatcaatatcaccaatgtgcatctttgaatcacgaagacaattctcaacagttttcatacactcattgaaaagatccatattaatttcctca |
16657803 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcct |
497 |
Q |
| |
|
|||||| || | ||||||||||||||||||||||| || ||||||||| ||||| ||||||| | |||| ||| || ||||||||||| |||||| |
|
|
| T |
16657802 |
aacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccc |
16657703 |
T |
 |
| Q |
498 |
tttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattct |
597 |
Q |
| |
|
| |||||||||||||||||| ||||| ||||||| | | | |||||||| || |||||| | | ||| ||||||||||||||||||| | |||| |
|
|
| T |
16657702 |
tctcacatgcagttctcaacctcctcaaggctcttgagttcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttct |
16657603 |
T |
 |
| Q |
598 |
gttatcaaagtcctctcccccgatgtgagtgtttcc |
633 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||| |
|
|
| T |
16657602 |
gttatcaaagtcctctcccccaaggtgagtgtttcc |
16657567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 130 - 635
Target Start/End: Original strand, 14703021 - 14703528
Alignment:
| Q |
130 |
agcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcaca |
229 |
Q |
| |
|
||||||||||| || ||||||| | | |||||||||| | ||||||||| ||||||||||| | || || || |||||||| || ||||| ||||||| |
|
|
| T |
14703021 |
agcaccaacttcggaacattcttgacgtcttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcaca |
14703120 |
T |
 |
| Q |
230 |
aatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccac |
329 |
Q |
| |
|
| |||||||| | ||| || | | |||| || ||| ||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
14703121 |
actccttcccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatctactctactcttgtccat |
14703220 |
T |
 |
| Q |
330 |
ctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaag |
427 |
Q |
| |
|
||| | |||| ||| |||||||| |||| ||| | ||||| ||||||| ||||||||| ||||| ||||||||| | | |||| |||||||||||| |
|
|
| T |
14703221 |
cttagcatcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttcaaacttggccctattgatcgatgaagaaaag |
14703320 |
T |
 |
| Q |
428 |
tcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaag |
527 |
Q |
| |
|
||||||| |||||||||| ||||| ||||| | | | || || | ||| || ||||| ||||||||| | || || || |||||||| || || | |
|
|
| T |
14703321 |
tcaatgcattgaaataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaagg |
14703420 |
T |
 |
| Q |
528 |
ctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagt |
627 |
Q |
| |
|
|| |||||| | ||||||||| |||| || |||| || || | ||||||||||||| |||||||||||| |||||||||||||||| |||||| |
|
|
| T |
14703421 |
cttttggatttccactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagtcctctcccccgaggtgagt |
14703520 |
T |
 |
| Q |
628 |
gtttccag |
635 |
Q |
| |
|
|||||||| |
|
|
| T |
14703521 |
gtttccag |
14703528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 103 - 635
Target Start/End: Original strand, 7541812 - 7542346
Alignment:
| Q |
103 |
ccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactg |
202 |
Q |
| |
|
||||| |||||||| || ||||| |||||||||||||||| || ||||||| |||| ||||||| | |||||||| ||||||||||| | || ||| | |
|
|
| T |
7541812 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgcagcctgaacagctgccccataagcaacag |
7541911 |
T |
 |
| Q |
203 |
cctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaac |
302 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| |||||||| || | ||||| | || ||| |||||||||| ||||| || |||||||| || |
|
|
| T |
7541912 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
7542011 |
T |
 |
| Q |
303 |
aatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtc--tatacacttgttaaaaaggtccatattgatttcctcaaac |
400 |
Q |
| |
|
|| |||||||| | |||||||||| || | |||| ||| ||| || |||| || ||||||| ||||||||| |||||||| || ||||||||| |
|
|
| T |
7542012 |
aacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatattcatctcctcaaac |
7542111 |
T |
 |
| Q |
401 |
ttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcctttt |
500 |
Q |
| |
|
||| | | |||| |||||||||||||||||||||||||||||| ||||| ||||| | | | | || ||| || |||| ||||||||| | | |
|
|
| T |
7542112 |
ttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaatagtggcaacaacaaggaaagaaagtgatctttttgccctct |
7542211 |
T |
 |
| Q |
501 |
cacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgtt |
600 |
Q |
| |
|
|||| |||||||||||| ||||| ||| |||||| | |||||||||| |||||||| |||| || || | ||||||||||||| |||||| || |
|
|
| T |
7542212 |
cacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgccattctatt |
7542311 |
T |
 |
| Q |
601 |
atcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
||||||||| ||||| || | ||||||||| |||| |
|
|
| T |
7542312 |
atcaaagtcttctccaccaaggtgagtgttgccag |
7542346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 101 - 458
Target Start/End: Original strand, 11998992 - 11999350
Alignment:
| Q |
101 |
taccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaac |
200 |
Q |
| |
|
||||||| |||||||| || ||||| ||| |||||| ||||| ||||||||| |||||||||| | |||||| || ||||||||||| | || || |
|
|
| T |
11998992 |
taccaagagacaaaggagtaacatcctgcaacaccaaatttggaacattcttaacatcttcactcaacaaagcagcttgaacagctgccccataagctac |
11999091 |
T |
 |
| Q |
201 |
tgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaaga |
300 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||| ||||| || | | | ||||| | || ||||||||| |||||||||| ||||| ||||| |
|
|
| T |
11999092 |
agcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggactttggga-tcctagaagatccaccaacaagt |
11999190 |
T |
 |
| Q |
301 |
acaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
398 |
Q |
| |
|
|||| |||||||| | |||||||||||| ||||| ||| ||| |||||||| |||||||| ||||| | |||| ||| || | ||| | |||||||| |
|
|
| T |
11999191 |
acaacatcatctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaa |
11999290 |
T |
 |
| Q |
399 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
458 |
Q |
| |
|
|||| | || |||| ||||||||||| |||||||||||||||||| ||||| ||||| |
|
|
| T |
11999291 |
actttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
11999350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 101 - 458
Target Start/End: Complemental strand, 12259165 - 12258806
Alignment:
| Q |
101 |
taccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaac |
200 |
Q |
| |
|
||||||| |||||||| || ||||| ||||| |||||||||| |||||| || ||||||| || | ||||||||| | ||| ||||| || || |
|
|
| T |
12259165 |
taccaagagacaaaggtgtaacatcctgcagctccaactttggaacattctggatatcttcacttaacaaagcagcctgaatagccgccccaaaagctac |
12259066 |
T |
 |
| Q |
201 |
tgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaaga |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||| || ||||| ||||| |||| | ||||| | |||||||||| ||||||||||||| ||||| ||||| |
|
|
| T |
12259065 |
agcctcatcaggattaatgctcttgcacaactctttccccttgaaaaaatcctgtaatagctgctgcactttgagaatcctagaagacccacctacaagg |
12258966 |
T |
 |
| Q |
301 |
acaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
398 |
Q |
| |
|
|||| |||||||||| ||||||||||| || | ||| |||| |||||||| |||||||| || || | || ||||| |||| ||| |||||||||| |
|
|
| T |
12258965 |
acaacatcatctacattactcttgtccgtgttagcatccgtaagacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttcctcaa |
12258866 |
T |
 |
| Q |
399 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
458 |
Q |
| |
|
||||| || || ||||||||| |||||| |||||||| | | ||||| ||||||||||| |
|
|
| T |
12258865 |
acttggcacgattgattgatgcagaaaaatcaatgccatcacataaagaatctatctcaa |
12258806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 635
Target Start/End: Original strand, 43624927 - 43625532
Alignment:
| Q |
32 |
ttgtcatcttcacaggtagagaagtattcctaggaattaccacatccatggtgcctcgattcactgaaataccaagcgacaaaggggtgacatctcgcag |
131 |
Q |
| |
|
||||| |||| ||||||| |||||||||||||||||| |||||| |||| |||| || | | |||||||| ||||||||||| ||||||||||| |
|
|
| T |
43624927 |
ttgtcttcttgacaggtacagaagtattcctaggaatcaccacactcatgacacctcccttgtttaagataccaagtgacaaaggggtaacatctcgcag |
43625026 |
T |
 |
| Q |
132 |
caccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaa |
231 |
Q |
| |
|
|||||| ||||| ||||||||||||||| |||||| | |||||||||||||||||| || | || ||| ||||||||||| || ||||| | ||| | |
|
|
| T |
43625027 |
caccaattttggaacattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgctttcgcatgat |
43625126 |
T |
 |
| Q |
232 |
tccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacct |
331 |
Q |
| |
|
|||||||| ||||| || | |||| || | | ||||| ||||| ||||| || || || ||||| |||| ||| | | | ||||||||||| || |
|
|
| T |
43625127 |
tccttccccttgaaaaactcctgcaacagctgttttacttttggaattctagaggagccgccaacaaggacaacatcgtggatagcactcttgtccaact |
43625226 |
T |
 |
| Q |
332 |
ttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtc |
429 |
Q |
| |
|
| | |||| ||| ||||||||||||||| | | ||||| ||| ||||| |||||||| ||||| ||||| ||| || |||||||||||||| | ||||| |
|
|
| T |
43625227 |
tggcatcaataagacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtc |
43625326 |
T |
 |
| Q |
430 |
aatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagct |
529 |
Q |
| |
|
||| || | |||||| ||||| ||||| | | ||| | || || |||||||||||| | | || ||||| ||||||||| ||| | ||| |
|
|
| T |
43625327 |
aataccacggaataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggct |
43625426 |
T |
 |
| Q |
530 |
cttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgt |
629 |
Q |
| |
|
|||| | | |||| ||||| ||||||||| ||| |||||| ||| |||||||||||| |||||| | ||||||||||||||| || | |||||||| |
|
|
| T |
43625427 |
cttgagtttccaataatatccacattgttcttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgt |
43625526 |
T |
 |
| Q |
630 |
ttccag |
635 |
Q |
| |
|
|||||| |
|
|
| T |
43625527 |
ttccag |
43625532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 109 - 458
Target Start/End: Complemental strand, 12245982 - 12245631
Alignment:
| Q |
109 |
gacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcat |
208 |
Q |
| |
|
|||||||| || ||||| ||| |||||| ||||| ||||||||| ||| |||||| | |||||| || ||||||||||| | || ||| ||||| | |
|
|
| T |
12245982 |
gacaaaggagtaacatcctgcaacaccaaatttggaacattcttaacatctttactcaacaaagcagcttgaacagctgccccataagcaacagcctcgt |
12245883 |
T |
 |
| Q |
209 |
caggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatc |
308 |
Q |
| |
|
|||| || |||||||||||||| |||||||| ||||| || | | ||||| | || |||||||||||||||||||| ||||| ||||| |||| ||| |
|
|
| T |
12245882 |
cagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaatc |
12245783 |
T |
 |
| Q |
309 |
atctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgaca |
406 |
Q |
| |
|
||||| | |||||||||||| ||||| ||| ||| |||||||| |||||||| ||||| | |||| ||| || | ||| | |||||||||||| | |
|
|
| T |
12245782 |
atctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaactttgcc |
12245683 |
T |
 |
| Q |
407 |
tgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
458 |
Q |
| |
|
|| |||| ||||||||||| |||||||||||||||||| ||||| ||||| |
|
|
| T |
12245682 |
cgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
12245631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 220 - 458
Target Start/End: Original strand, 12234392 - 12234632
Alignment:
| Q |
220 |
ctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactac |
319 |
Q |
| |
|
|||||||||| |||||||| ||||| |||| ||||||||| ||||||||||||||||||||| || || || | ||| |||| ||||| || |||| |
|
|
| T |
12234392 |
ctcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggacccgccaataaggacaacttcatccaccctac |
12234491 |
T |
 |
| Q |
320 |
tcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattga |
417 |
Q |
| |
|
| ||||||| ||| | |||| ||| |||||||| |||| ||| ||||||| ||| ||| |||||||| ||||||||||||||| | | |||| || |
|
|
| T |
12234492 |
ttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaataagaagatccatattcatttcctcaaacttggccctattgatcga |
12234591 |
T |
 |
| Q |
418 |
tgaagaaaagtcaatgccttgaaataaattatctatctcaa |
458 |
Q |
| |
|
||||||||| |||||||||| ||||||| ||||| ||||| |
|
|
| T |
12234592 |
tgaagaaaaatcaatgccttcaaataaagaatctacctcaa |
12234632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 633
Target Start/End: Original strand, 12234753 - 12234807
Alignment:
| Q |
579 |
caaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttcc |
633 |
Q |
| |
|
||| |||||| | ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12234753 |
caaggtagtttaccattctgttatcaaagtcctctcccccgaggtgagtgtttcc |
12234807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 635
Target Start/End: Complemental strand, 12245535 - 12245454
Alignment:
| Q |
554 |
ttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
|||||||| |||| || |||| | |||||||||| | |||||| |||||||| |||||||| || | |||||||||||||| |
|
|
| T |
12245535 |
ttgttctttctcttgaactcctgtgcaaagtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccag |
12245454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 635
Target Start/End: Complemental strand, 12258710 - 12258629
Alignment:
| Q |
554 |
ttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
|||||||| |||| || || ||||||||||| ||| |||||| ||||||||||||||||| || | ||| |||||||||| |
|
|
| T |
12258710 |
ttgttctttctcttgaactcttctacaaagtaactcaccattctattatcaaagtcctctcctccaaggtgcgtgtttccag |
12258629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 184; Significance: 3e-99; HSPs: 38)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 43 - 635
Target Start/End: Complemental strand, 8586348 - 8585754
Alignment:
| Q |
43 |
acaggtagagaagtattcctaggaattaccacatccatggtgcctcgattcactgaaataccaagcgacaaaggggtgacatctcgcagcaccaactttg |
142 |
Q |
| |
|
||||||| || ||||||||||||||| |||||| |||| | ||| || |||| |||||||| |||| |||||| ||||||||||||||||| |||| |
|
|
| T |
8586348 |
acaggtacagtagtattcctaggaataaccacagccataatatctccatggcctgagataccaagtgacagaggggtaacatctcgcagcaccaagtttg |
8586249 |
T |
 |
| Q |
143 |
gggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccatt |
242 |
Q |
| |
|
| | ||||||| | ||| || || | || |||||| || || ||||| || ||| |||||||||||||||||| ||||||| ||||| |||||||| |
|
|
| T |
8586248 |
gaactttcttaaagtctttacacagcaaagaagcctgaactgcagccccactagcaacagcctcatcaggattgatgttcttgcataaatctttcccatt |
8586149 |
T |
 |
| Q |
243 |
gaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatcagta |
342 |
Q |
| |
|
|||||| | || |||||||||||| ||||||||||| || || || ||||||||||| |||||||| ||||||| | |||| || | ||| ||||| ||| |
|
|
| T |
8586148 |
gaagaagtcactcaatagttcctgtactttgggaattctggacgagccaccgacaaggacaatatcgtctacaccattcttctctatcttagaatcggta |
8586049 |
T |
 |
| Q |
343 |
aaacaactcttaacag--tctatacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaa |
440 |
Q |
| |
|
| |||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || || | ||| | | |
|
|
| T |
8586048 |
agacaactctcaacagtatttatacactcattaaaaaggtccatattgatttcctcaaacttgacacgcgtgattgatgaagagaaatcgacgccctcac |
8585949 |
T |
 |
| Q |
441 |
ataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcg |
540 |
Q |
| |
|
|||||| ||| || |||| | | |||| || ||||| || |||||||||||||||||||||||||| ||||| ||| | |||||||||||||| | |
|
|
| T |
8585948 |
ataaataatcaatttcaatagtagtgaccaatttgaaagaaagtgtcctttttgccttttcacatgccgttcttaaccgcctcaaagctcttgggttctt |
8585849 |
T |
 |
| Q |
541 |
ggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| ||||||| |
|
|
| T |
8585848 |
agtaatatccacattgttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttccag |
8585754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 43 - 598
Target Start/End: Original strand, 8616204 - 8616764
Alignment:
| Q |
43 |
acaggtagagaagtattcctaggaattaccacatccatggtgcctcgattcactgaaataccaagcgacaaaggggtgacatctcgcagcaccaactttg |
142 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| ||| | ||| || ||| | |||||||| |||| |||||| |||||||||||| |||| |||| |
|
|
| T |
8616204 |
acaggtacagaagtattcctaggaatcaccacactcataatatctcctttgactaagataccaagtgacagaggggtaacatctcgcagcgccaagtttg |
8616303 |
T |
 |
| Q |
143 |
gggcattcttaatgccttcact---caatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttccc |
239 |
Q |
| |
|
| ||||||||| | || | | ||| | ||||||||| || |||||||| || ||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8616304 |
gaacattcttaaagtctgtagtacccaacaaagcagcctgaactgctgccccactagcaacagcctcatcaggattgatgttcttgcacaaatccttccc |
8616403 |
T |
 |
| Q |
240 |
attgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatca |
339 |
Q |
| |
|
|| ||| || | || |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| || | ||| |||||| |
|
|
| T |
8616404 |
atcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccaccgacaagaacaatatcatctacactactcttctctatcttagaatca |
8616503 |
T |
 |
| Q |
340 |
gtaaaacaactcttaacagtc--tatacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgcctt |
437 |
Q |
| |
|
|||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || || ||||| | |
|
|
| T |
8616504 |
ttaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgatttcctcaaacttaacacgagtgattgatgaagagaaatcgatgccct |
8616603 |
T |
 |
| Q |
438 |
gaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatc |
537 |
Q |
| |
|
| |||||| ||| ||||||| | | |||| || ||||| || || ||| ||| |||||||| ||||||||| ||||| | ||||| | |||||| | |
|
|
| T |
8616604 |
cacataaataatcaatctcaatagtagtgaccaatttgaatgaaagcatccgtttcgccttttcgcatgcagttttcaaccgcctcaacgatcttgggtt |
8616703 |
T |
 |
| Q |
538 |
gcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctg |
598 |
Q |
| |
|
| ||||| ||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
8616704 |
cctagtaatatccacattgttcttcctcttaaaatcctcaacaaagtagttcaacattctg |
8616764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 132 - 635
Target Start/End: Complemental strand, 27831428 - 27830923
Alignment:
| Q |
132 |
caccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaa |
231 |
Q |
| |
|
|||||| ||||| ||||| ||||| | |||||||| | ||||||||| |||||||| || || ||| |||||||||||||||||||||||||||||| |
|
|
| T |
27831428 |
caccaagtttggaacattcataatgtcatcactcaacaaagcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaa |
27831329 |
T |
 |
| Q |
232 |
tccttcccattgaagaaattacgc-aatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacc |
330 |
Q |
| |
|
||||| || ||||| ||| | ||| ||||| | |||||||||||||||||| ||||| ||||| ||||| |||| |||||||| |||||||||||||| | |
|
|
| T |
27831328 |
tcctttcccttgaa-aaagtccgccaatagctgctgcactttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatc |
27831230 |
T |
 |
| Q |
331 |
tttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagt |
428 |
Q |
| |
|
|| || ||||| | |||||||| |||||||| ||||| | || ||||||||||||||||||||||||||||| || ||||||| |||| | |||| |
|
|
| T |
27831229 |
ttagagtcagtgagacaactctcaacagtctccatacattcattgaaaaggtccatattgatttcctcaaactttgcacgagtgatcattgaaaagaagt |
27831130 |
T |
 |
| Q |
429 |
caatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagc |
528 |
Q |
| |
|
||||||| | |||||| ||||||||||| | | ||| || || |||||||||||||||||||| |||||| ||||||| | ||||| || |
|
|
| T |
27831129 |
caatgccctcaaataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggc |
27831030 |
T |
 |
| Q |
529 |
tcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtg |
628 |
Q |
| |
|
|||||| | | |||||||||| | |||||| |||| || |||| ||||| ||||||| ||| || ||||||||||||||||| || | ||||||| |
|
|
| T |
27831029 |
tcttgggttcccactaatgtccactcttttcttcttcttgaacacctccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtgagtg |
27830930 |
T |
 |
| Q |
629 |
tttccag |
635 |
Q |
| |
|
||||||| |
|
|
| T |
27830929 |
tttccag |
27830923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 101 - 634
Target Start/End: Original strand, 6789096 - 6789631
Alignment:
| Q |
101 |
taccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaac |
200 |
Q |
| |
|
||||||| ||||| || || |||||| |||||||||| ||||| || ||||| |||||| ||||| | |||||||||||||||||| |||| || ||| |
|
|
| T |
6789096 |
taccaagagacaacggtgtaacatcttgcagcaccaagtttggaacactcttagagccttcgctcaacaaagcagcctggacagctgcaccgtaagcaac |
6789195 |
T |
 |
| Q |
201 |
tgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaaga |
300 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| || |||| | | ||||||||| |||||||||||||| |||||||| ||||| ||||| |
|
|
| T |
6789196 |
agcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccaccaacaagg |
6789295 |
T |
 |
| Q |
301 |
acaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
398 |
Q |
| |
|
|||| ||||| |||| |||||||||||| ||| | ||| || |||||||| ||| |||| ||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
6789296 |
acaacatcatttacaatactcttgtccatcttagcgtcaacaagacaactctcaacggtcttcatacactcattaaaaatatccatattgatttcctcaa |
6789395 |
T |
 |
| Q |
399 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcctt |
498 |
Q |
| |
|
||||| | |||| | ||||||| ||||| ||||| ||||||||| |||| ||||| | | |||| | || |||||| |||||| ||| | |
|
|
| T |
6789396 |
acttggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccct |
6789495 |
T |
 |
| Q |
499 |
ttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctg |
598 |
Q |
| |
|
|||||| |||||||||||| ||| || || |||| | | ||||| ||||| ||||||||| ||||||| |||||| |||||||||| | || || | |
|
|
| T |
6789496 |
ttcacacgcagttctcaaccttcttaaggcccttgagtttccagtaatatccactttgttcttcctcttaaactcctctgcaaagtagtttaccaatcgg |
6789595 |
T |
 |
| Q |
599 |
ttatcaaagtcctctcccccgatgtgagtgtttcca |
634 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
6789596 |
ttatcaaagtcctctcctccgaggtgagtgtttcca |
6789631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 99 - 630
Target Start/End: Complemental strand, 10494960 - 10494427
Alignment:
| Q |
99 |
aataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaa |
198 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| |||||||| || ||| ||||||||| |||||||||||| | ||||||||| |||||||| || | || | |
|
|
| T |
10494960 |
aataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagca |
10494861 |
T |
 |
| Q |
199 |
actgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaa |
298 |
Q |
| |
|
|| |||||||| || ||||| | | || | || |||||||| ||||| || | ||||||| ||||||||||||||||||||||| || ||||| |||| |
|
|
| T |
10494860 |
acagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaa |
10494761 |
T |
 |
| Q |
299 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
396 |
Q |
| |
|
||||||||||||| | | | |||||| | ||||||||| | | |||||| | |||| | | ||||||| | | |||| ||| ||||| |||||||| |
|
|
| T |
10494760 |
gaacaatatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctc |
10494661 |
T |
 |
| Q |
397 |
aaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcc |
496 |
Q |
| |
|
||| ||| || |||||||||||||||||||||| || || ||||||| ||| | |||||| | |||| ||| || |||||| ||||||||||| |
|
|
| T |
10494660 |
aaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgcc |
10494561 |
T |
 |
| Q |
497 |
ttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattc |
596 |
Q |
| |
|
| ||||| |||||||||||| || || | | |||||| | | ||||||||||| |||||| | || || ||||| ||||| || |||| ||||| |
|
|
| T |
10494560 |
ctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattc |
10494461 |
T |
 |
| Q |
597 |
tgttatcaaagtcctctcccccgatgtgagtgtt |
630 |
Q |
| |
|
||||||| |||||||||||||| | ||||||||| |
|
|
| T |
10494460 |
tgttatcgaagtcctctcccccaaggtgagtgtt |
10494427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 100 - 638
Target Start/End: Original strand, 8658946 - 8659486
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| ||||| ||||| |||||| |||||||||| |||||| ||||||||| ||||| || || | |||||| || | |||||| || | || || |
|
|
| T |
8658946 |
ataccaagtgacaatggggtaacatcttgcagcaccaagtttgggacattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaa |
8659045 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| |||||||| || ||||| |||||| | ||| ||||| ||| | | ||||||| || |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
8659046 |
cagcctcatctgggttgatactcttgtataaaaccttctttgggaaaaggtcttgcaatagatcttgcactttgggaatcctagacgaaccacccacaag |
8659145 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
||||||||| || | | |||| | | | |||||||| ||| |||||||| |||||| | ||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
8659146 |
aacaatatcgtcaatatcactcatctgtatttttgaatcgctaagacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctca |
8659245 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcct |
497 |
Q |
| |
|
||| || || |||||||| ||||| | ||||| || || ||||||||| ||| | ||||||| | |||| ||| || ||||||||||| |||||| |
|
|
| T |
8659246 |
aacctggcacgagtgattaatgaacagaagtctattccctgaaataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccc |
8659345 |
T |
 |
| Q |
498 |
tttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattct |
597 |
Q |
| |
|
| ||||| |||||||||||| || || | | |||| | | |||||||||| || |||||| | || || ||||||||||||||||||| |||||| |
|
|
| T |
8659346 |
tctcacaggcagttctcaacctccttaaggattttgggttaccactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattct |
8659445 |
T |
 |
| Q |
598 |
gttatcaaagtcctctcccccgatgtgagtgtttccagaag |
638 |
Q |
| |
|
| |||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
8659446 |
gctatcaaagtcctctcctccaaggtgagtgtttccagaag |
8659486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 171 - 517
Target Start/End: Original strand, 17267593 - 17267941
Alignment:
| Q |
171 |
agcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcact |
270 |
Q |
| |
|
||||||||| ||||| || || | || ||| ||||||||||| ||||| || ||||| || |||||||| |||||||| || ||||||||| ||||||| |
|
|
| T |
17267593 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcact |
17267692 |
T |
 |
| Q |
271 |
ttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacact |
368 |
Q |
| |
|
|| |||||||||||||| ||||| ||||| |||| |||||| || || |||||||| | ||| | |||| ||| ||| ||| |||| ||| || |||| |
|
|
| T |
17267693 |
ttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcact |
17267792 |
T |
 |
| Q |
369 |
tgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgag |
468 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| || |||||||||| |||||||| |||| || | ||||||| |||| ||||||| | || | |
|
|
| T |
17267793 |
catcaaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgtctacctcaacattggtcac |
17267892 |
T |
 |
| Q |
469 |
aaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaac |
517 |
Q |
| |
|
| | ||| || |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17267893 |
agaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaac |
17267941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 100 - 445
Target Start/End: Original strand, 8545216 - 8545563
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||| |||||| |||||||| || ||||||||| | |||||||||||||||||| || | || || |
|
|
| T |
8545216 |
ataccaagtgacaaaggggtaacatctcgtagcaccatgtttgggacattcttattgtcttcactcagcaaagcagcctggacagctgcaccataagcaa |
8545315 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| ||||||||||| || ||||||||||| || |||||||| || || || | | ||||| | |||||| ||||||||||||||||| || ||||| |
|
|
| T |
8545316 |
cagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccgccaacaag |
8545415 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaaca--gtctatacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
|||| |||||||||||||| |||||||| ||| | |||| || ||||| |||||| ||| |||||||| | ||| ||||||||||| | || |||| |
|
|
| T |
8545416 |
gacaacatcatctacactacccttgtccatcttagcatcaacaagacaacaattaacagtgtccatacacttttcaaagaggtccatattcaattgctca |
8545515 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaa |
445 |
Q |
| |
|
|||||| | ||||||| ||||| |||||||||| |||||| ||||| |
|
|
| T |
8545516 |
aacttggcccgagtgatgcatgaacaaaagtcaataccttgatataaa |
8545563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 100 - 635
Target Start/End: Original strand, 8654033 - 8654570
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| ||||| ||||| ||||| || |||||||| || ||| ||||||||| | |||||||||| | ||||||||| ||||| || || | | || |
|
|
| T |
8654033 |
ataccaagtgacaatggggtaacatcacgtagcaccaagttggggacattcttaaagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaa |
8654132 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
|||||||| || ||||| || | ||||| ||||||| ||||| || | ||||||| ||||||||||||||||||||||| || ||||| || || |
|
|
| T |
8654133 |
tagcctcatctgggttgatattcataaacaaagccttccccttgaaaaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgag |
8654232 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
|||| |||||| | | | |||||| | ||||||||| | | |||||| | |||| | | ||||||| || |||| ||||||||| ||||||||| |
|
|
| T |
8654233 |
tacaacatcatcaatatcattcttgtatatctttgaatctctgagacaactgtcaacaatattgatacactcattgaaaaagtccatattaatttcctca |
8654332 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcct |
497 |
Q |
| |
|
|| || || |||||||||||||||||||||| || || ||||||| ||||| ||||||| | |||| ||| | || |||||| ||||||||||| |
|
|
| T |
8654333 |
aatttagcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccc |
8654432 |
T |
 |
| Q |
498 |
tttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattct |
597 |
Q |
| |
|
| ||||| |||||||||||| || || | | |||| | | | |||| ||||| || |||||| | || || |||||||||||||||| || |||||| |
|
|
| T |
8654433 |
tctcacaggcagttctcaacctccttaaggattttgggttaccgctaatttccactttattcttctttttgaactcctctacaaagtagtacaccattct |
8654532 |
T |
 |
| Q |
598 |
gttatcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
|||||||||||| |||||||| | ||| |||||||||| |
|
|
| T |
8654533 |
gttatcaaagtcttctccccctaggtgcgtgtttccag |
8654570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 171 - 517
Target Start/End: Original strand, 17259895 - 17260243
Alignment:
| Q |
171 |
agcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcact |
270 |
Q |
| |
|
||||||||| ||||| || || | || ||| ||||||||||| |||||||||||||| || ||||| || |||||||||| ||||||||| ||||||| |
|
|
| T |
17259895 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcact |
17259994 |
T |
 |
| Q |
271 |
ttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacact |
368 |
Q |
| |
|
|| |||||||||||||| ||||| ||||| |||| |||||| | || |||||||| | ||| |||| ||| ||| ||| |||| ||| || |||| |
|
|
| T |
17259995 |
ttcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcact |
17260094 |
T |
 |
| Q |
369 |
tgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgag |
468 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||| || |||||||||| |||||||| | || || | ||||||| |||| ||||||| | || | |
|
|
| T |
17260095 |
cataaaaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaacacccttaaataaagcgtctacctcaacattggtcac |
17260194 |
T |
 |
| Q |
469 |
aaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaac |
517 |
Q |
| |
|
| | || || |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17260195 |
agaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaac |
17260243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 102 - 403
Target Start/End: Original strand, 8575911 - 8576214
Alignment:
| Q |
102 |
accaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaact |
201 |
Q |
| |
|
||||| |||||| || || |||||||| | |||||| ||||| |||||||| ||||||||||||| | |||||| |||||| | || || | || ||| |
|
|
| T |
8575911 |
accaaacgacaacggtgtaacatctcgtaacaccaagtttggaacattcttactgccttcactcaacaaagcagcttggacaacagcaccataagcaaca |
8576010 |
T |
 |
| Q |
202 |
gcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaa |
301 |
Q |
| |
|
||||||||||| ||||||||||| || || |||||||| ||||| | | | ||||| | |||||| |||||||||||||||||||| ||||| | |
|
|
| T |
8576011 |
gcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaagga |
8576110 |
T |
 |
| Q |
302 |
caatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaa |
399 |
Q |
| |
|
||| ||||||||||||| ||||||||| ||| | ||||| || |||| | |||||||| | |||||||| | ||| |||| |||||| ||||||||||| |
|
|
| T |
8576111 |
caacatcatctacactattcttgtccatcttagcatcagcaagacaaatattaacagtattcatacacttttcaaagaggttcatattcatttcctcaaa |
8576210 |
T |
 |
| Q |
400 |
cttg |
403 |
Q |
| |
|
|||| |
|
|
| T |
8576211 |
cttg |
8576214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 121 - 421
Target Start/End: Original strand, 8537640 - 8537942
Alignment:
| Q |
121 |
acatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgc |
220 |
Q |
| |
|
||||||||||||||||| || || || ||||||||||| | ||||| | ||||||||||||||| || || | || ||| || |||||||| ||||||| |
|
|
| T |
8537640 |
acatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgc |
8537739 |
T |
 |
| Q |
221 |
tcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactact |
320 |
Q |
| |
|
| || | | ||||||||| |||| || || ||| || |||||||||||||||||||||||| ||||| || || |||| |||||| | |||||| |
|
|
| T |
8537740 |
ttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactact |
8537839 |
T |
 |
| Q |
321 |
cttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgat |
418 |
Q |
| |
|
|||||| ||| | |||| ||||||||||||||||||| | |||||||| | ||| |||||||| |||| || |||||||||| | ||||||||||| |
|
|
| T |
8537840 |
actgtccatcttagcatcattaaaacaactcttaacagttttcatacacttttcaaagaggtccatgttgagttgctcaaacttggcccgagtgattgat |
8537939 |
T |
 |
| Q |
419 |
gaa |
421 |
Q |
| |
|
||| |
|
|
| T |
8537940 |
gaa |
8537942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 432
Target Start/End: Original strand, 8609500 - 8609834
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||||||| ||||| | || |||||||||| ||| | ||||||||||||||| || || | || || |
|
|
| T |
8609500 |
ataccaagtgacaaaggtgtaacatctcgcagcaccaagtttggaactgatttgatgccttcacccaacaaagcagcctggacagcagcaccataagcaa |
8609599 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| ||||||||||| ||||||||| | ||||||||||| |||||||| || | ||| ||| | || |||||| ||||||||||||||||| || ||||| |
|
|
| T |
8609600 |
ccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaag |
8609699 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
||||| ||||||||| | |||| |||| | | |||||||| ||| || | ||| |||| |||||||| | ||| |||||||| || | || |||| |
|
|
| T |
8609700 |
aacaacatcatctacggttttcttatccatttcagcatcagtaagacatctttcaaccgtctccatacacttttcaaagaggtccatgttaagttgctca |
8609799 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaat |
432 |
Q |
| |
|
||||| || |||||||||||||| |||| ||||| |
|
|
| T |
8609800 |
aacttcgcacgagtgattgatgaacaaaaatcaat |
8609834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 97 - 311
Target Start/End: Original strand, 8666999 - 8667213
Alignment:
| Q |
97 |
gaaataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgag |
196 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||| || ||| |||||||| |||||||||||| | ||||||||| |||||||| || | || |
|
|
| T |
8666999 |
gaaataccaagtgacaaaggggtcacatctcgtagcaccaagttggggacattcttacagccttcactcaaaatagcagcctgaacagctgcaccataag |
8667098 |
T |
 |
| Q |
197 |
aaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgac |
296 |
Q |
| |
|
||| ||||| || || ||||| | | || | || |||||||| ||||| | | ||||| ||||||||||||||||||||||||| || |||||||| |
|
|
| T |
8667099 |
caacagcctcgtctgggttgatacccatgaataattccttccccttgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgac |
8667198 |
T |
 |
| Q |
297 |
aagaacaatatcatc |
311 |
Q |
| |
|
||| |||| |||||| |
|
|
| T |
8667199 |
aagtacaacatcatc |
8667213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 146 - 324
Target Start/End: Complemental strand, 29582380 - 29582202
Alignment:
| Q |
146 |
cattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaa |
245 |
Q |
| |
|
|||||| |||||||||| ||| | ||||||||| |||||||| || | || ||| ||||||||||| ||||||||| |||||||||||||||| ||||| |
|
|
| T |
29582380 |
cattctcaatgccttcaatcagcaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaa |
29582281 |
T |
 |
| Q |
246 |
gaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttg |
324 |
Q |
| |
|
|| | ||||||| | |||||||||||||| |||||||| ||||| | ||| || ||||||||||||||||||||| |
|
|
| T |
29582280 |
aaattcttgcaatagctgatgcactttgggaattctagaagagccaccaataaggacgatatcatctacactactcttg |
29582202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 254 - 399
Target Start/End: Complemental strand, 8383307 - 8383160
Alignment:
| Q |
254 |
gcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactctt |
353 |
Q |
| |
|
||||||| || ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| || ||| | |||||||| ||| |||| |
|
|
| T |
8383307 |
gcaatagctcttgcactttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctc |
8383208 |
T |
 |
| Q |
354 |
aacagtct--atacacttgttaaaaaggtccatattgatttcctcaaa |
399 |
Q |
| |
|
|||||||| |||||||| | ||| ||||||||||||| || |||||| |
|
|
| T |
8383207 |
aacagtctccatacacttttcaaataggtccatattgagttgctcaaa |
8383160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 458
Target Start/End: Original strand, 3146847 - 3147207
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| |||||||| | |||||| ||| |||||| ||||| |||| |||| | |||||||||| | |||||| || |||||||| || | || || |
|
|
| T |
3146847 |
ataccaagagacaaaggagcaacatcttgcaccaccaagtttggaacatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccataagcaa |
3146946 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattac-gcaatagttcctgcactttgggaatcctagaagaaccaccgacaa |
298 |
Q |
| |
|
| ||||||||||| |||||||| || |||| || |||||| | || ||||| | ||||||||| |||||||| ||||| ||||| || |||||||||| |
|
|
| T |
3146947 |
cggcctcatcagggttgatgctgttacacagatgcttccc-tgcaaaaaattcctgcaatagttgttgcacttttggaattctagacgagccaccgacaa |
3147045 |
T |
 |
| Q |
299 |
gaacaatatcatctacactactcttgtccacctttga-atcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcct |
395 |
Q |
| |
|
| || | ||||| || | ||| ||||||| || || ||||| ||||||||||||||||| | | ||||| | ||||| |||||||||||||||| |
|
|
| T |
3147046 |
ggacgacatcatgtatagcacttttgtccat-ttcgacatcagcgaaacaactcttaacagtttccaaacactcagtgaaaagatccatattgatttcct |
3147144 |
T |
 |
| Q |
396 |
caaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
458 |
Q |
| |
|
|||||||| || |||||||||||||| | ||||||| || ||||||||| ||||||||||| |
|
|
| T |
3147145 |
caaacttggcacgagtgattgatgaaaataagtcaaatccctgaaataaagaatctatctcaa |
3147207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 102 - 439
Target Start/End: Original strand, 8581285 - 8581624
Alignment:
| Q |
102 |
accaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaact |
201 |
Q |
| |
|
|||||| ||||| || || |||||||||| | ||| ||||| || |||||||||||||||| | | ||||||||| | ||| || || | || ||| |
|
|
| T |
8581285 |
accaagtgacaatggtgtaacatctcgcaaaatcaagtttggaacactcttaatgccttcactaaccaaagcagcctgaatagcagcaccataagcaaca |
8581384 |
T |
 |
| Q |
202 |
gcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaa |
301 |
Q |
| |
|
||||||||||| |||||||||||||| || |||||||| | ||| || | | ||||| | |||||| |||||||||||||||||||| ||||| | |
|
|
| T |
8581385 |
gcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaagga |
8581484 |
T |
 |
| Q |
302 |
caatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaaca--gtctatacacttgttaaaaaggtccatattgatttcctcaaa |
399 |
Q |
| |
|
||| |||||||||||||| | |||||| ||| | ||| | || |||||| |||||| ||| |||||||| | ||| |||| |||||| |||| |||||| |
|
|
| T |
8581485 |
caacatcatctacactacccctgtccatcttagcatcggcaagacaactattaacagtgtccatacacttttcaaagaggttcatattcatttgctcaaa |
8581584 |
T |
 |
| Q |
400 |
cttgacatgagtgattgatgaagaaaagtcaatgccttga |
439 |
Q |
| |
|
|||| | |||| ||||| ||| | |||||||| |||||| |
|
|
| T |
8581585 |
cttggcccgagttattgacgaatagaagtcaataccttga |
8581624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 173 - 403
Target Start/End: Original strand, 8569967 - 8570199
Alignment:
| Q |
173 |
cagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcacttt |
272 |
Q |
| |
|
||||||| | |||||| |||| || ||| ||||||||||| || ||||| ||||| || |||||||| | ||| || | | ||||| | | |||||| |
|
|
| T |
8569967 |
cagcctgaatagctgcaccgtaagcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcacttt |
8570066 |
T |
 |
| Q |
273 |
gggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacag--tctatacacttg |
370 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| ||||||||||||| |||| |||| ||| | ||||| || |||||| ||||||| || |||||||| |
|
|
| T |
8570067 |
aggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttttccatcttagcatcagcaagacaactattaacagtttccatacacttt |
8570166 |
T |
 |
| Q |
371 |
ttaaaaaggtccatattgatttcctcaaacttg |
403 |
Q |
| |
|
| ||| |||| |||||| ||||||||||||||| |
|
|
| T |
8570167 |
tcaaagaggttcatattcatttcctcaaacttg |
8570199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 100 - 328
Target Start/End: Complemental strand, 29578257 - 29578029
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||||||||| || || | |||||||| ||||| ||||| ||||||||||||| ||| |||| | ||||||||| |||||||| || | || || |
|
|
| T |
29578257 |
ataccaagcgacaagggtgtaatatctcgcaagaccaaatttggaacattcttaatgccatcaatcaacaaagcagcctgcacagctgcaccataagcaa |
29578158 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| ||||| ||||| || |||||| ||||||||||| | || ||||| || | ||||||||| | ||||||||||||| ||||| ||||| || ||||| |
|
|
| T |
29578157 |
cagcctcgtcagggtttatgctcatgcacaaatccctacccttgaaaaagtcttgcaatagtttccgcactttgggaattctagatgaacctccaacaag |
29578058 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtcca |
328 |
Q |
| |
|
||||| |||| ||| |||||| ||||| |
|
|
| T |
29578057 |
gacaatttcatgtaccatactctggtcca |
29578029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 198 - 421
Target Start/End: Original strand, 8601655 - 8601880
Alignment:
| Q |
198 |
aactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgaca |
297 |
Q |
| |
|
||||||||||||||||||||||||| ||| | ||||||| |||||| || | || || || |||||||||||||||||||||||||| || ||| |
|
|
| T |
8601655 |
aactgcctcatcaggattgatgctcacgcaaatgtccttccaattgaaaaattctttcagtaattgttgcactttgggaatcctagaagaaccgccaaca |
8601754 |
T |
 |
| Q |
298 |
agaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacag--tctatacacttgttaaaaaggtccatattgatttcct |
395 |
Q |
| |
|
|| ||| |||||| ||||||||||| || | || | |||| ||| |||||| | ||||| ||||||||||| ||||| ||||||| ||||| || || |
|
|
| T |
8601755 |
aggacagcatcatccacactactcttttcgatctgagcatcactaagacaactttcaacagtctctatacacttcttaaagaggtccacattgagttgct |
8601854 |
T |
 |
| Q |
396 |
caaacttgacatgagtgattgatgaa |
421 |
Q |
| |
|
|||||||| | |||||||||||||| |
|
|
| T |
8601855 |
caaacttggcccgagtgattgatgaa |
8601880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 101 - 328
Target Start/End: Original strand, 8590222 - 8590449
Alignment:
| Q |
101 |
taccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaac |
200 |
Q |
| |
|
||||||| ||||| || || |||||| | |||||||| || || |||||||||| || |||| | | |||||| || |||||||| || | || ||| |
|
|
| T |
8590222 |
taccaagagacaatggagtaacatcttgtagcaccaaattaggaacattcttaatcccatcacaaagcaaagcagcttgaacagctgcaccataagcaac |
8590321 |
T |
 |
| Q |
201 |
tgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaaga |
300 |
Q |
| |
|
|||||||| ||||||||||| ||| | | ||||||||| | || || | ||||||| | |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8590322 |
agcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagt |
8590421 |
T |
 |
| Q |
301 |
acaatatcatctacactactcttgtcca |
328 |
Q |
| |
|
|||| |||||||||| | ||||||||| |
|
|
| T |
8590422 |
acaacatcatctacaatgttcttgtcca |
8590449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 109 - 635
Target Start/End: Original strand, 8646469 - 8646997
Alignment:
| Q |
109 |
gacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcat |
208 |
Q |
| |
|
||||| |||||||||||| | | |||||| ||||| |||||||||| ||| |||| |||| ||||||||| || ||||| || | || ||| ||| ||| |
|
|
| T |
8646469 |
gacaatggggtgacatcttgaaacaccaagtttggagcattcttaaagccatcacataataaagcagcctgaacggctgcgccataagcaacggccacat |
8646568 |
T |
 |
| Q |
209 |
caggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatc |
308 |
Q |
| |
|
|||| |||||||||| ||| || |||||| ||||||| || | || | | || ||||| ||||| ||||| || ||||| |||||||||| ||| |
|
|
| T |
8646569 |
cagggttgatgctctcgcataattccttctcattgaaaaactccttcagcatctgttgtacttttggaattctagaggagccaccaacaagaacaacatc |
8646668 |
T |
 |
| Q |
309 |
atctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgaca |
406 |
Q |
| |
|
|| | | ||||||||||| ||| | |||| || |||||||| |||||| | | ||| | | | || || |||||||||||| | ||||| ||| || |
|
|
| T |
8646669 |
atggatagaactcttgtccatcttggcatcattatgacaactctcaacagtttccaaacattcgatgaacagatccatattgattgcgtcaaatttggca |
8646768 |
T |
 |
| Q |
407 |
tgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatg |
506 |
Q |
| |
|
|||||||||||||| |||||||||||| | ||||||| ||||| |||| | ||| | | || || |||||||||||||| | || |||| |
|
|
| T |
8646769 |
cgagtgattgatgaaataaagtcaatgccattaaataaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttgctctctcgcatg |
8646868 |
T |
 |
| Q |
507 |
cagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaa |
606 |
Q |
| |
|
| ||||||||| || || ||||||| | | ||||||||||| ||||||||| | |||||||| | | |||||| || || |||||| ||||||| |
|
|
| T |
8646869 |
ccgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccattctactatcaaa |
8646968 |
T |
 |
| Q |
607 |
gtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
||||||||| |||| |||||||||||||| |
|
|
| T |
8646969 |
gtcctctcctccgaggtgagtgtttccag |
8646997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 265 - 634
Target Start/End: Original strand, 1301208 - 1301579
Alignment:
| Q |
265 |
tgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtctat- |
363 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||||||||||| | | |||| || | |||||||| ||| |||||||| ||| || | | |
|
|
| T |
1301208 |
tgcactttgggaatcctagacgagccacccacaagaacaatatcatcgatatcactcatgcatatttttgaatcgctaagacaactctcaacggtttttg |
1301307 |
T |
 |
| Q |
364 |
-acacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaat |
462 |
Q |
| |
|
||||| |||||||| |||||||| ||||||||||||||| || |||||||| ||||| | ||||| || || ||||||||| ||| | |||||| | |
|
|
| T |
1301308 |
tacactcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaaataaagaatcgacctcaacggt |
1301407 |
T |
 |
| Q |
463 |
tgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttc |
562 |
Q |
| |
|
|||| || || |||||||||||||||||| | ||||| ||| |||||||| || || | | | | | | |||||||||| || |||||| |
|
|
| T |
1301408 |
ggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttaccactaatgtccactttattcttc |
1301507 |
T |
 |
| Q |
563 |
gtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttcca |
634 |
Q |
| |
|
| | || ||||||||||||||| ||| |||||| ||||||||||||||||| || | |||||| |||||| |
|
|
| T |
1301508 |
tttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttcca |
1301579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 403
Target Start/End: Complemental strand, 7878315 - 7878013
Alignment:
| Q |
103 |
ccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactg |
202 |
Q |
| |
|
||||| ||||| || || |||||| ||| |||||| || || |||||||||| || |||| | ||||||||||| |||||||| || | || ||| | |
|
|
| T |
7878315 |
ccaagagacaatggagtaacatcttgcaacaccaaattaggaacattcttaataccatcacaaagcagagcagcctgaacagctgcaccataagcaacag |
7878216 |
T |
 |
| Q |
203 |
cctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaac |
302 |
Q |
| |
|
| ||||| || |||||||| |||| | ||||||||| || || || | ||||||| | |||||||||| |||||||||| || ||||| ||||| || |
|
|
| T |
7878215 |
cttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagtac |
7878116 |
T |
 |
| Q |
303 |
aatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagt--ctatacacttgttaaaaaggtccatattgatttcctcaaac |
400 |
Q |
| |
|
|| |||||||||| | ||||||||| | | | |||||||| ||||||||| ||| | | | ||| || | |||||| |||||||||| || ||||||| |
|
|
| T |
7878115 |
aacatcatctacattgttcttgtccatcatagcatcagtaagacaactcttgacaatcgccaaacaattttcaaaaagatccatattgagttgctcaaac |
7878016 |
T |
 |
| Q |
401 |
ttg |
403 |
Q |
| |
|
||| |
|
|
| T |
7878015 |
ttg |
7878013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 13333959 - 13333835
Alignment:
| Q |
94 |
actgaaataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgt |
193 |
Q |
| |
|
|||||||||||||| || || ||| | |||||||| |||||||| || ||| || |||||| |||||||||||| | ||||||||| |||||||| || | |
|
|
| T |
13333959 |
actgaaataccaagtgataatgggataacatctcgtagcaccaagttcgggacagtcttaaagccttcactcaaaatagcagcctgaacagctgcaccat |
13333860 |
T |
 |
| Q |
194 |
gagaaactgcctcatcaggattgat |
218 |
Q |
| |
|
|| ||| |||||||| || ||||| |
|
|
| T |
13333859 |
aagcaacagcctcatctgggttgat |
13333835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 374 - 633
Target Start/End: Complemental strand, 13333765 - 13333506
Alignment:
| Q |
374 |
aaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaact |
473 |
Q |
| |
|
|||| ||| ||||| ||||||||||| ||| || |||||||||||||||||||||| || || ||||||| ||||| |||||| | |||| ||| |
|
|
| T |
13333765 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacttcaacagtggtgacaaaag |
13333666 |
T |
 |
| Q |
474 |
tgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattc |
573 |
Q |
| |
|
||||||||| |||||||| || | ||||| |||||||||||| || || | | |||| | | | || || ||||| |||||| | || || || |
|
|
| T |
13333665 |
aaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaaggattttgggttcccactgatatcgacgttattcttctttttgaactc |
13333566 |
T |
 |
| Q |
574 |
ctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttcc |
633 |
Q |
| |
|
||| ||||| ||||||| |||||||||||| ||||| |||||||| | |||||||||||| |
|
|
| T |
13333565 |
ctcaacaaaatagttcaccattctgttatcgaagtcttctcccccaaggtgagtgtttcc |
13333506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 633
Target Start/End: Original strand, 3147292 - 3147382
Alignment:
| Q |
543 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttcc |
633 |
Q |
| |
|
||||||| || ||||||||| ||||||| ||| | |||||||||||| ||| || |||||||||||||||||||| | ||| |||||||| |
|
|
| T |
3147292 |
taatgtctaccttgttcttcttcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctctcccccaaggtgggtgtttcc |
3147382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 615
Target Start/End: Complemental strand, 8636483 - 8636411
Alignment:
| Q |
543 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcc |
615 |
Q |
| |
|
||||||| || ||||||||| |||| | |||||||||||| || | || |||||||||||||||||||||||| |
|
|
| T |
8636483 |
taatgtctaccttgttcttcctcttgatttcctctacaaaatattccaccattctgttatcaaagtcctctcc |
8636411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 633
Target Start/End: Original strand, 8667449 - 8667537
Alignment:
| Q |
545 |
atgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttcc |
633 |
Q |
| |
|
|||||||| || |||||| | || || ||||| ||||| ||||||| |||||||||||| |||||||| ||||| | |||||||||||| |
|
|
| T |
8667449 |
atgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaaggtgagtgtttcc |
8667537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 188
Target Start/End: Original strand, 8558912 - 8559054
Alignment:
| Q |
46 |
ggtagagaagtattcctaggaattaccacatccatggtgcctcgattcactgaaataccaagcgacaaaggggtgacatctcgcagcaccaactttgggg |
145 |
Q |
| |
|
|||| |||||||||||||||||| |||||| ||| | ||| ||||| ||||||||| ||||||||||| ||||||| |||||||| ||||| |
|
|
| T |
8558912 |
ggtacagaagtattcctaggaatcaccacactcataatatctccggtcacttcaataccaagggacaaaggggtaacatctctcagcaccatgtttggaa |
8559011 |
T |
 |
| Q |
146 |
cattcttaatgccttcactcaatagagcagcctggacagctgc |
188 |
Q |
| |
|
|||||||| || ||||||| | | | |||||||||||||||| |
|
|
| T |
8559012 |
cattcttagtgtcttcactaagcaaaacagcctggacagctgc |
8559054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 432
Target Start/End: Original strand, 8664907 - 8664977
Alignment:
| Q |
362 |
atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaat |
432 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| | || |||| ||||||||| |||| ||||| |
|
|
| T |
8664907 |
atacactttgtaaaaaggtccatattgatttcctcaaacctcgcacgagttattgatgaacaaaattcaat |
8664977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 27846645 - 27846555
Alignment:
| Q |
146 |
cattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatcctt |
236 |
Q |
| |
|
||||||||||| | |||||||| | ||||||||| |||||||| || || ||| ||||||||||| |||||||||||| ||| |||||| |
|
|
| T |
27846645 |
cattcttaatgtcatcactcaacaaagcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgctcttgtacatatcctt |
27846555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 310
Target Start/End: Original strand, 8102311 - 8102460
Alignment:
| Q |
161 |
cactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatag |
260 |
Q |
| |
|
||||||| | |||||| || ||||| || || | || ||| ||||| || || |||||||| ||||| | ||||| ||||||||||| | |||| || |
|
|
| T |
8102311 |
cactcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacag |
8102410 |
T |
 |
| Q |
261 |
ttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcat |
310 |
Q |
| |
|
|| ||| |||||||||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
8102411 |
ttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcat |
8102460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 638
Target Start/End: Original strand, 8559372 - 8559456
Alignment:
| Q |
554 |
ttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaag |
638 |
Q |
| |
|
||||||||| ||| ||| || | |||||||| |||| |||||||||||||||||||||||| |||| ||| |||| ||| |||| |
|
|
| T |
8559372 |
ttgttcttcctctcaaactcttttacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaag |
8559456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 615
Target Start/End: Complemental strand, 7877872 - 7877801
Alignment:
| Q |
544 |
aatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcc |
615 |
Q |
| |
|
||||||||| || |||||| ||||||| ||| || || | |||||||||||||||||||||||||||||| |
|
|
| T |
7877872 |
aatgtccactttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctcc |
7877801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 517
Target Start/End: Original strand, 8576293 - 8576328
Alignment:
| Q |
482 |
agtgtcctttttgccttttcacatgcagttctcaac |
517 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8576293 |
agtgtcctttttgccttttcacaagcagttctcaac |
8576328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 635
Target Start/End: Original strand, 8628608 - 8628652
Alignment:
| Q |
591 |
acattctgttatcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
||||||||||||||||||||||||| || | |||||| ||||||| |
|
|
| T |
8628608 |
acattctgttatcaaagtcctctccaccaaggtgagtatttccag |
8628652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 139; Significance: 2e-72; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 100 - 635
Target Start/End: Complemental strand, 4679142 - 4678606
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| ||||| ||||| |||||||||||||| || || ||| ||||||||| ||||| ||||| | |||||| |||| |||||| || | || || |
|
|
| T |
4679142 |
ataccaagtgacaatggggtaacatctcgcagcacaaaattcgggacattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaa |
4679043 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaag |
299 |
Q |
| |
|
| |||||||| || ||||| ||||||||||||||||||| || || || | ||||||| |||||||||||||||||||| || |||||||| ||||| |
|
|
| T |
4679042 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaag |
4678943 |
T |
 |
| Q |
300 |
aacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctca |
397 |
Q |
| |
|
||||| |||||| | | ||||| | || |||||||||| ||| ||||||||||||||| | ||||||| ||| |||||||||||||| ||||||||| |
|
|
| T |
4678942 |
aacaacatcatcaatattactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctca |
4678843 |
T |
 |
| Q |
398 |
aacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcct |
497 |
Q |
| |
|
|||||| || |||| || |||||||||||||| || || ||||||||| ||||| ||||||| | |||| ||| ||| ||||||||||| |||||| |
|
|
| T |
4678842 |
aacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatcta-ctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccc |
4678744 |
T |
 |
| Q |
498 |
tttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattct |
597 |
Q |
| |
|
| || || |||||||||||| || || | | ||| | |||||||||| || |||||| | || || ||||||||||||||||||| |||||| |
|
|
| T |
4678743 |
tctcgcaggcagttctcaacctccttaagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattct |
4678644 |
T |
 |
| Q |
598 |
gttatcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||| |
|
|
| T |
4678643 |
gttatcaaagtcctctccacctaggtgagtgtttccag |
4678606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 102 - 633
Target Start/End: Original strand, 15594619 - 15595152
Alignment:
| Q |
102 |
accaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaact |
201 |
Q |
| |
|
|||||| |||||||| | |||||| | | |||||| ||||| |||| |||| ||||||||||| | |||||||||||||||||| || | || ||| |
|
|
| T |
15594619 |
accaagagacaaaggtgcaacatcttgtatcaccaagtttggaacatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaaca |
15594718 |
T |
 |
| Q |
202 |
gcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaa |
301 |
Q |
| |
|
||||||||||| ||||||||| ||||||| ||||| || | ||| |||| |||||||| ||||||||||||||||||||||| ||||| |||| | |
|
|
| T |
15594719 |
gcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaatga |
15594818 |
T |
 |
| Q |
302 |
caatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaa |
399 |
Q |
| |
|
||||||||| |||||||||||| | || ||| | |||| || |||||||| ||| ||| ||||| | ||||||| |||||| |||||||| ||||| |
|
|
| T |
15594819 |
caatatcatttacactactcttattcatcttagcatcatcaagacaactctcaactatcttcatacaatccttaaaaaagtccatgttgatttcttcaaa |
15594918 |
T |
 |
| Q |
400 |
cttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttt |
499 |
Q |
| |
|
|||| | |||| | |||||| | |||||||| || | ||||||| ||||| ||||| | |||| | | || |||||| |||||||||| || |
|
|
| T |
15594919 |
cttggaacgagtaaccgatgaaaagaagtcaataccgttaaataaacaatctacctcaatggtagtgacagtagtaaaagagagtaccctttttgccctt |
15595018 |
T |
 |
| Q |
500 |
tcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgt |
599 |
Q |
| |
|
|| || ||||||||||| ||||| || ||||| | | ||||| ||||| |||||||||||||| ||||||| |||||||||| | |||||||| |
|
|
| T |
15595019 |
tcgcacgcagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgttcttcgtcttgaattcctgcgcaaagtagttgaccattctgt |
15595118 |
T |
 |
| Q |
600 |
tatcaaagtcctctcccccgatgtgagtgtttcc |
633 |
Q |
| |
|
|||||||||||||||| || | |||||||||||| |
|
|
| T |
15595119 |
tatcaaagtcctctcctccaaggtgagtgtttcc |
15595152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 121 - 328
Target Start/End: Complemental strand, 34467352 - 34467145
Alignment:
| Q |
121 |
acatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgc |
220 |
Q |
| |
|
||||||||||||||||| ||||| |||| |||| ||||| |||||| | |||||| || |||||||| | | || || ||||||||||| ||||||| |
|
|
| T |
34467352 |
acatctcgcagcaccaagtttggaacattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgc |
34467253 |
T |
 |
| Q |
221 |
tcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactact |
320 |
Q |
| |
|
| ||||| | |||||| |||||||| || | |||||||| | |||||||||||||||||||||||| || |||||||| ||| ||||| |||||||| |
|
|
| T |
34467252 |
tattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcatgcacactact |
34467153 |
T |
 |
| Q |
321 |
cttgtcca |
328 |
Q |
| |
|
| |||||| |
|
|
| T |
34467152 |
cgtgtcca |
34467145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 52549527 - 52549395
Alignment:
| Q |
104 |
caagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgc |
203 |
Q |
| |
|
|||| |||||||| || ||||| |||||||||||||||| |||||| ||||||||||||||| | |||||||| |||||||| || | || || | |
|
|
| T |
52549527 |
caagagacaaaggtgtaacatcctgcagcaccaactttggaacattctgaatgccttcactcaacaatgcagcctgaacagctgcgccataagctacaac |
52549428 |
T |
 |
| Q |
204 |
ctcatcaggattgatgctcttgcacaaatcctt |
236 |
Q |
| |
|
|||||||||||| |||| ||||||||| ||||| |
|
|
| T |
52549427 |
ctcatcaggattaatgcccttgcacaactcctt |
52549395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 379 - 417
Target Start/End: Complemental strand, 34467089 - 34467051
Alignment:
| Q |
379 |
gtccatattgatttcctcaaacttgacatgagtgattga |
417 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
34467089 |
gtccatattgatttcctcaaacttggcacgagtgattga |
34467051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 52549333 - 52549292
Alignment:
| Q |
362 |
atacacttgttaaaaaggtccatattgatttcctcaaacttg |
403 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
52549333 |
atacactccttaaaaaggtccatattcatttcctcaaacttg |
52549292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 93; Significance: 6e-45; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 100 - 636
Target Start/End: Original strand, 43744399 - 43744937
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| || ||||| | |||||| ||||||||| ||||| | || |||| |||||||||||| | ||||||||| |||||||| || || || |
|
|
| T |
43744399 |
ataccaagagaaaaaggtgcaacatcttgcagcaccacgtttggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaa |
43744498 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattac-gcaatagttcctgcactttgggaatcctagaagaaccaccgacaa |
298 |
Q |
| |
|
||||||||||||| || ||| |||| |||||||||||||| | || ||||| | ||||||||| || ||||| ||||||||||| || ||||| |||| |
|
|
| T |
43744499 |
ctgcctcatcagggttaatgttcttacacaaatccttccc-tgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaa |
43744597 |
T |
 |
| Q |
299 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
396 |
Q |
| |
|
|||||| ||||| || | |||||||||| ||| | |||||||| |||||||| |||| | | | ||||| ||| || || ||||||||||||||||| |
|
|
| T |
43744598 |
gaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctc |
43744697 |
T |
 |
| Q |
397 |
aaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcc |
496 |
Q |
| |
|
|||||| | ||||||||| || | | || |||||||| | ||||||| ||||| ||||| | | |||| || || || | |||||||||||| |
|
|
| T |
43744698 |
aaacttagtacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgct |
43744797 |
T |
 |
| Q |
497 |
ttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattc |
596 |
Q |
| |
|
|||| ||||| ||||||||| || || |||||||| | | ||||||||||| ||||||||| ||||||| |||||| | |||||||||| ||| | |
|
|
| T |
43744798 |
ctttcgcatgctgttctcaacctccttaatgctcttgggtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcc |
43744897 |
T |
 |
| Q |
597 |
tgttatcaaagtcctctcccccgatgtgagtgtttccaga |
636 |
Q |
| |
|
| |||||||| |||||||| |||| ||||||||||||||| |
|
|
| T |
43744898 |
tattatcaaaatcctctcctccgaggtgagtgtttccaga |
43744937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 149 - 435
Target Start/End: Original strand, 12528136 - 12528424
Alignment:
| Q |
149 |
tcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaa |
248 |
Q |
| |
|
|||| |||||||||||||| | ||||||||| ||||| || || | || ||| ||||||||||| |||||||||||| | || ||||| || ||||| || |
|
|
| T |
12528136 |
tcttcatgccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaa |
12528235 |
T |
 |
| Q |
249 |
attacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaa |
348 |
Q |
| |
|
| ||||||| | || |||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||| ||| | ||| || |||||| |
|
|
| T |
12528236 |
ctcctgcaatagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaa |
12528335 |
T |
 |
| Q |
349 |
ctcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgcc |
435 |
Q |
| |
|
|| | ||| |||| |||||||| | ||| ||||||||||| | || ||| |||||| | ||||||||||||| | ||||||||||| |
|
|
| T |
12528336 |
ctttcaacggtctccatacacttttcaaagaggtccatattcagttgctcgaacttggctcgagtgattgatgagcagaagtcaatgcc |
12528424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 100 - 635
Target Start/End: Original strand, 28219501 - 28220038
Alignment:
| Q |
100 |
ataccaagcgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagaaa |
199 |
Q |
| |
|
|||||||| |||||||| || |||||| ||||||||||||| || | || |||| |||||||||||| | ||||||||| |||||||| || | || || |
|
|
| T |
28219501 |
ataccaagagacaaaggtgtaacatcttgcagcaccaacttcggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaa |
28219600 |
T |
 |
| Q |
200 |
ctgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattac-gcaatagttcctgcactttgggaatcctagaagaaccaccgacaa |
298 |
Q |
| |
|
| ||||||||||| || |||||||| ||||| |||||||| | || ||||| | ||| ||||| || ||||| ||||| ||||| || || || |||| |
|
|
| T |
28219601 |
cagcctcatcagggttaatgctcttacacaattccttccc-tccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagcctccaacaa |
28219699 |
T |
 |
| Q |
299 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaaaacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
396 |
Q |
| |
|
|||||| ||| | |||| |||||||||| || | |||||| | ||| |||| |||||| | | ||||| || ||||| ||||||||||||||||| |
|
|
| T |
28219700 |
gaacaacatcgtgtacagccctcttgtccatattggcatcagtgagacacctctcaacagttttcaaacactcattgaaaagatccatattgatttcctc |
28219799 |
T |
 |
| Q |
397 |
aaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcc |
496 |
Q |
| |
|
|||||| || |||| ||||||||| | || |||||||||| ||||||| ||||| ||||| | | || || || || |||||||||||||| |
|
|
| T |
28219800 |
aaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgct |
28219899 |
T |
 |
| Q |
497 |
ttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattc |
596 |
Q |
| |
|
| | || || ||||||||| || || ||||||| | | ||||||||||| ||||||||| ||||||| |||||| | |||||||||| ||| | |
|
|
| T |
28219900 |
ctcttgcacgctgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcc |
28219999 |
T |
 |
| Q |
597 |
tgttatcaaagtcctctcccccgatgtgagtgtttccag |
635 |
Q |
| |
|
| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28220000 |
tactatcaaagtcctctcccccgaggtgagtgtttccag |
28220038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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