View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4494-Insertion-8 (Length: 512)

Name: NF4494-Insertion-8
Description: NF4494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4494-Insertion-8
NF4494-Insertion-8
[»] chr6 (37 HSPs)
chr6 (7-393)||(34683696-34684082)
chr6 (298-393)||(24242694-24242791)
chr6 (298-393)||(32132382-32132479)
chr6 (241-393)||(10960030-10960193)
chr6 (297-393)||(11279158-11279256)
chr6 (298-393)||(166925-167022)
chr6 (298-393)||(2614926-2615023)
chr6 (298-393)||(3259713-3259810)
chr6 (298-393)||(10324113-10324210)
chr6 (298-393)||(15276939-15277036)
chr6 (298-393)||(15277282-15277379)
chr6 (298-393)||(24203392-24203489)
chr6 (298-393)||(11382094-11382189)
chr6 (298-393)||(3932809-3932906)
chr6 (298-393)||(10485187-10485284)
chr6 (298-393)||(11212287-11212384)
chr6 (298-393)||(17867865-17867962)
chr6 (298-393)||(17877648-17877745)
chr6 (302-393)||(18597164-18597257)
chr6 (298-393)||(32409854-32409951)
chr6 (298-393)||(34176860-34176957)
chr6 (299-393)||(18057549-18057645)
chr6 (298-391)||(11613793-11613888)
chr6 (298-393)||(4494116-4494214)
chr6 (298-393)||(17443292-17443389)
chr6 (306-393)||(3290702-3290789)
chr6 (305-393)||(31870109-31870199)
chr6 (339-393)||(8177926-8177980)
chr6 (339-393)||(14808046-14808100)
chr6 (298-393)||(14925458-14925555)
chr6 (304-393)||(9902666-9902757)
chr6 (298-387)||(11675376-11675467)
chr6 (304-393)||(29054386-29054477)
chr6 (446-511)||(34684135-34684201)
chr6 (299-393)||(3379740-3379836)
chr6 (457-511)||(15277099-15277153)
chr6 (239-287)||(33041413-33041461)
[»] chr2 (49 HSPs)
chr2 (7-393)||(26981369-26981769)
chr2 (239-393)||(9732825-9732990)
chr2 (297-393)||(17540745-17540843)
chr2 (298-393)||(5278797-5278894)
chr2 (242-393)||(37308685-37308847)
chr2 (241-393)||(7761470-7761633)
chr2 (302-393)||(3913427-3913520)
chr2 (298-393)||(7258927-7259024)
chr2 (298-393)||(32497945-32498042)
chr2 (298-393)||(35114815-35114912)
chr2 (298-393)||(40692327-40692424)
chr2 (298-393)||(42706389-42706486)
chr2 (299-393)||(33889273-33889369)
chr2 (241-393)||(34338840-34339003)
chr2 (298-393)||(18685866-18685963)
chr2 (298-393)||(19513652-19513749)
chr2 (298-393)||(33366640-33366737)
chr2 (298-393)||(44284659-44284756)
chr2 (298-393)||(32766467-32766565)
chr2 (298-393)||(40832432-40832529)
chr2 (298-393)||(42365607-42365704)
chr2 (299-393)||(11114902-11114998)
chr2 (299-393)||(16104304-16104400)
chr2 (298-393)||(30326295-30326391)
chr2 (304-393)||(38993040-38993131)
chr2 (305-393)||(6896198-6896288)
chr2 (338-393)||(9717254-9717309)
chr2 (298-389)||(30798451-30798545)
chr2 (298-393)||(2645050-2645146)
chr2 (339-393)||(37003874-37003928)
chr2 (311-393)||(26418953-26419037)
chr2 (304-393)||(12672443-12672534)
chr2 (300-393)||(41366075-41366170)
chr2 (339-393)||(1247177-1247231)
chr2 (102-181)||(27082022-27082105)
chr2 (32-78)||(27082143-27082189)
chr2 (339-393)||(38623310-38623364)
chr2 (305-379)||(8112344-8112420)
chr2 (239-389)||(13829472-13829621)
chr2 (297-393)||(16177845-16177943)
chr2 (310-393)||(12939275-12939360)
chr2 (298-373)||(27462765-27462842)
chr2 (298-364)||(39461376-39461441)
chr2 (309-393)||(28824531-28824617)
chr2 (339-393)||(2086102-2086156)
chr2 (446-508)||(26418839-26418901)
chr2 (339-373)||(40767207-40767241)
chr2 (339-391)||(4641548-4641600)
chr2 (339-375)||(45463116-45463152)
[»] chr5 (39 HSPs)
chr5 (261-393)||(35701307-35701450)
chr5 (263-393)||(5571582-5571710)
chr5 (241-393)||(7523202-7523365)
chr5 (241-393)||(8136867-8137030)
chr5 (298-393)||(21739130-21739227)
chr5 (298-393)||(31770560-31770657)
chr5 (298-393)||(32528745-32528842)
chr5 (297-393)||(553427-553525)
chr5 (298-390)||(4689667-4689761)
chr5 (241-393)||(11963371-11963534)
chr5 (298-393)||(4818109-4818206)
chr5 (298-393)||(24181593-24181690)
chr5 (306-393)||(28090497-28090586)
chr5 (298-392)||(6284267-6284363)
chr5 (299-393)||(39918537-39918633)
chr5 (304-393)||(2351710-2351801)
chr5 (298-393)||(34794917-34795014)
chr5 (298-393)||(39788223-39788320)
chr5 (298-393)||(41459619-41459715)
chr5 (298-384)||(5673178-5673266)
chr5 (298-390)||(7770248-7770342)
chr5 (298-390)||(29241411-29241505)
chr5 (298-393)||(3735387-3735484)
chr5 (298-393)||(31880045-31880142)
chr5 (304-393)||(40489367-40489458)
chr5 (241-393)||(22493322-22493485)
chr5 (305-393)||(24036260-24036350)
chr5 (297-393)||(41790430-41790528)
chr5 (339-393)||(31644476-31644530)
chr5 (305-393)||(7725785-7725875)
chr5 (305-393)||(18470404-18470494)
chr5 (339-393)||(7208242-7208296)
chr5 (339-393)||(8560994-8561048)
chr5 (298-393)||(23091273-23091370)
chr5 (339-393)||(40182494-40182548)
chr5 (339-389)||(700613-700663)
chr5 (307-393)||(22432287-22432375)
chr5 (473-511)||(4689842-4689880)
chr5 (339-393)||(27839085-27839139)
[»] chr8 (45 HSPs)
chr8 (298-393)||(8673033-8673130)
chr8 (298-393)||(34101538-34101635)
chr8 (241-393)||(4052510-4052673)
chr8 (298-393)||(14005022-14005119)
chr8 (298-393)||(29563204-29563301)
chr8 (298-393)||(30543000-30543097)
chr8 (260-393)||(34063158-34063302)
chr8 (298-393)||(7394792-7394889)
chr8 (298-393)||(27103989-27104086)
chr8 (298-389)||(29672301-29672394)
chr8 (298-393)||(37664261-37664358)
chr8 (301-392)||(17520626-17520718)
chr8 (298-390)||(30501178-30501272)
chr8 (302-393)||(31513565-31513658)
chr8 (298-393)||(45446485-45446582)
chr8 (241-393)||(5968776-5968939)
chr8 (241-393)||(10467094-10467257)
chr8 (241-393)||(13406847-13407010)
chr8 (305-393)||(29611040-29611130)
chr8 (298-393)||(32019979-32020076)
chr8 (339-393)||(32303606-32303660)
chr8 (298-393)||(37861889-37861986)
chr8 (298-393)||(39642913-39643010)
chr8 (299-393)||(41548648-41548744)
chr8 (298-391)||(37618370-37618465)
chr8 (241-393)||(3251568-3251731)
chr8 (241-389)||(41709811-41709970)
chr8 (339-393)||(6386606-6386660)
chr8 (298-393)||(12753303-12753400)
chr8 (339-389)||(15001500-15001550)
chr8 (339-393)||(21272714-21272768)
chr8 (304-393)||(31732094-31732185)
chr8 (304-393)||(35225692-35225783)
chr8 (297-393)||(17805721-17805819)
chr8 (298-393)||(7591425-7591522)
chr8 (298-393)||(25478273-25478370)
chr8 (298-391)||(40389072-40389167)
chr8 (340-393)||(10932766-10932819)
chr8 (300-393)||(10656666-10656761)
chr8 (305-389)||(16595134-16595220)
chr8 (298-393)||(22999287-22999385)
chr8 (241-287)||(35225809-35225855)
chr8 (241-287)||(38047493-38047539)
chr8 (345-393)||(10320304-10320352)
chr8 (339-391)||(27109562-27109614)
[»] chr4 (69 HSPs)
chr4 (241-393)||(38812553-38812716)
chr4 (241-393)||(2725023-2725185)
chr4 (298-393)||(21202772-21202869)
chr4 (298-393)||(24002372-24002469)
chr4 (298-393)||(33176988-33177085)
chr4 (298-393)||(49152056-49152153)
chr4 (298-393)||(50727869-50727966)
chr4 (298-393)||(50735883-50735980)
chr4 (298-393)||(55065288-55065386)
chr4 (298-393)||(20802487-20802584)
chr4 (298-393)||(23521913-23522010)
chr4 (298-393)||(52319356-52319453)
chr4 (305-393)||(6776611-6776701)
chr4 (305-393)||(26083372-26083462)
chr4 (298-393)||(4325824-4325921)
chr4 (298-393)||(24210352-24210449)
chr4 (298-393)||(29785493-29785590)
chr4 (298-393)||(33552798-33552895)
chr4 (298-393)||(36743644-36743741)
chr4 (298-393)||(36885965-36886062)
chr4 (298-393)||(37865786-37865883)
chr4 (298-393)||(52949753-52949850)
chr4 (298-393)||(55593918-55594015)
chr4 (298-393)||(56154654-56154751)
chr4 (241-393)||(1231344-1231507)
chr4 (305-393)||(3649669-3649759)
chr4 (297-393)||(32181296-32181394)
chr4 (298-393)||(12600919-12601016)
chr4 (298-393)||(20517978-20518075)
chr4 (298-393)||(20694404-20694501)
chr4 (298-393)||(21580059-21580156)
chr4 (298-393)||(28115285-28115382)
chr4 (298-393)||(38486213-38486310)
chr4 (298-393)||(44649120-44649217)
chr4 (298-393)||(46680466-46680563)
chr4 (241-393)||(36497250-36497413)
chr4 (298-382)||(42772832-42772918)
chr4 (297-393)||(54543023-54543120)
chr4 (298-393)||(9512296-9512393)
chr4 (307-390)||(16320555-16320640)
chr4 (339-393)||(43641132-43641186)
chr4 (339-393)||(47642490-47642544)
chr4 (339-391)||(44324341-44324393)
chr4 (304-393)||(50186561-50186652)
chr4 (305-393)||(50729505-50729595)
chr4 (298-393)||(2629907-2630004)
chr4 (339-393)||(7001885-7001939)
chr4 (298-385)||(11056083-11056172)
chr4 (339-393)||(37695540-37695594)
chr4 (298-393)||(41711880-41711977)
chr4 (307-393)||(53200608-53200697)
chr4 (307-393)||(34929948-34930036)
chr4 (339-391)||(37931955-37932007)
chr4 (339-393)||(23327951-23328006)
chr4 (342-393)||(43739494-43739545)
chr4 (298-393)||(50178448-50178546)
chr4 (339-393)||(22318383-22318437)
chr4 (298-393)||(29592928-29593025)
chr4 (341-391)||(38520534-38520584)
chr4 (339-393)||(39078694-39078748)
chr4 (298-375)||(47361370-47361448)
chr4 (300-393)||(25978569-25978664)
chr4 (298-393)||(42870007-42870101)
chr4 (305-393)||(7554920-7555010)
chr4 (241-287)||(6776728-6776774)
chr4 (298-393)||(9807189-9807285)
chr4 (298-393)||(29616203-29616295)
chr4 (473-511)||(53200775-53200813)
chr4 (304-373)||(6973875-6973946)
[»] chr3 (42 HSPs)
chr3 (241-393)||(29584906-29585069)
chr3 (298-393)||(4851415-4851510)
chr3 (298-393)||(28675821-28675918)
chr3 (304-393)||(34026698-34026789)
chr3 (298-391)||(51925165-51925260)
chr3 (298-393)||(3864632-3864729)
chr3 (298-393)||(20609605-20609702)
chr3 (298-393)||(21373961-21374058)
chr3 (298-393)||(24571312-24571409)
chr3 (298-393)||(25860378-25860475)
chr3 (298-393)||(51259737-51259834)
chr3 (299-393)||(25927285-25927381)
chr3 (308-393)||(21221327-21221414)
chr3 (304-393)||(39052801-39052892)
chr3 (304-393)||(42636366-42636457)
chr3 (298-391)||(49748868-49748963)
chr3 (241-393)||(1344598-1344761)
chr3 (241-393)||(40094534-40094697)
chr3 (298-393)||(12349128-12349225)
chr3 (298-393)||(44116970-44117067)
chr3 (298-393)||(47958389-47958486)
chr3 (305-393)||(19906793-19906883)
chr3 (298-393)||(31882979-31883076)
chr3 (298-393)||(51296612-51296709)
chr3 (298-393)||(53557752-53557849)
chr3 (241-386)||(2135108-2135264)
chr3 (304-393)||(38213385-38213476)
chr3 (298-393)||(20255076-20255172)
chr3 (298-393)||(50678829-50678926)
chr3 (300-393)||(3964319-3964414)
chr3 (339-391)||(29646099-29646151)
chr3 (298-393)||(33364735-33364832)
chr3 (303-393)||(54622758-54622850)
chr3 (338-393)||(5442322-5442377)
chr3 (339-389)||(3867649-3867699)
chr3 (298-393)||(50386413-50386510)
chr3 (298-337)||(3695264-3695303)
chr3 (342-393)||(34351371-34351422)
chr3 (342-393)||(44267773-44267824)
chr3 (348-393)||(3695301-3695346)
chr3 (298-364)||(41683010-41683078)
chr3 (304-393)||(52300468-52300558)
[»] chr1 (49 HSPs)
chr1 (297-393)||(45490912-45491010)
chr1 (304-393)||(30105724-30105815)
chr1 (298-391)||(51264536-51264631)
chr1 (241-393)||(1351407-1351570)
chr1 (298-393)||(1601212-1601307)
chr1 (298-393)||(17887987-17888084)
chr1 (298-393)||(31004171-31004268)
chr1 (298-393)||(35387349-35387446)
chr1 (298-391)||(32289382-32289477)
chr1 (241-393)||(844696-844859)
chr1 (241-393)||(6711018-6711181)
chr1 (253-393)||(12890277-12890428)
chr1 (298-393)||(24339676-24339774)
chr1 (298-393)||(7183957-7184054)
chr1 (298-393)||(16386893-16386990)
chr1 (298-393)||(16451166-16451263)
chr1 (299-393)||(16437401-16437497)
chr1 (304-393)||(32270392-32270483)
chr1 (305-393)||(6029346-6029436)
chr1 (298-393)||(5109767-5109864)
chr1 (298-393)||(28340341-28340438)
chr1 (298-393)||(42510564-42510661)
chr1 (298-393)||(44738080-44738177)
chr1 (298-393)||(50540383-50540480)
chr1 (299-393)||(41972950-41973046)
chr1 (298-393)||(26118253-26118350)
chr1 (298-393)||(26764833-26764930)
chr1 (298-393)||(41967887-41967984)
chr1 (300-393)||(6144026-6144121)
chr1 (298-393)||(16476193-16476290)
chr1 (298-393)||(16704765-16704862)
chr1 (298-393)||(39281933-39282030)
chr1 (339-393)||(42705319-42705373)
chr1 (339-393)||(50382484-50382538)
chr1 (297-391)||(45658862-45658958)
chr1 (300-393)||(13994115-13994210)
chr1 (339-391)||(25539896-25539948)
chr1 (339-393)||(38663171-38663225)
chr1 (298-393)||(42512808-42512905)
chr1 (298-375)||(17327687-17327766)
chr1 (339-391)||(11772713-11772765)
chr1 (304-393)||(49303398-49303489)
chr1 (297-393)||(38087033-38087131)
chr1 (342-393)||(39792846-39792897)
chr1 (297-393)||(51703201-51703298)
chr1 (304-391)||(3414897-3414986)
chr1 (241-287)||(32270509-32270555)
chr1 (239-287)||(15539860-15539908)
chr1 (298-355)||(20494946-20495005)
[»] scaffold0169 (2 HSPs)
scaffold0169 (298-393)||(18023-18120)
scaffold0169 (339-393)||(12548-12602)
[»] chr7 (53 HSPs)
chr7 (300-393)||(21784905-21785000)
chr7 (241-393)||(26994123-26994286)
chr7 (298-393)||(1870169-1870266)
chr7 (298-393)||(10932521-10932618)
chr7 (298-393)||(43158650-43158747)
chr7 (298-393)||(47953224-47953321)
chr7 (297-393)||(23349254-23349352)
chr7 (241-393)||(26371707-26371870)
chr7 (241-393)||(44748729-44748892)
chr7 (298-393)||(11321849-11321946)
chr7 (298-393)||(18386559-18386655)
chr7 (298-389)||(29661361-29661454)
chr7 (298-393)||(36769533-36769630)
chr7 (298-393)||(40753189-40753286)
chr7 (298-393)||(41211164-41211261)
chr7 (298-393)||(43189206-43189303)
chr7 (298-389)||(3922667-3922760)
chr7 (298-393)||(47316662-47316759)
chr7 (307-393)||(32873742-32873830)
chr7 (102-178)||(30222360-30222436)
chr7 (298-391)||(30849210-30849305)
chr7 (300-393)||(34519542-34519637)
chr7 (298-393)||(18470718-18470813)
chr7 (305-390)||(329507-329594)
chr7 (304-393)||(3891996-3892087)
chr7 (298-375)||(11250669-11250748)
chr7 (298-391)||(16963174-16963269)
chr7 (339-393)||(22631772-22631826)
chr7 (298-393)||(38301377-38301473)
chr7 (306-392)||(26910382-26910470)
chr7 (298-375)||(30598972-30599051)
chr7 (298-382)||(11822268-11822354)
chr7 (342-393)||(48699432-48699483)
chr7 (339-393)||(26652900-26652954)
chr7 (339-393)||(34117486-34117540)
chr7 (339-393)||(34295411-34295465)
chr7 (297-392)||(43213888-43213985)
chr7 (339-393)||(46633731-46633785)
chr7 (298-392)||(1363671-1363767)
chr7 (298-391)||(20127325-20127420)
chr7 (304-393)||(22724501-22724592)
chr7 (13-84)||(30222250-30222324)
chr7 (339-393)||(29372786-29372840)
chr7 (298-389)||(37967012-37967105)
chr7 (339-393)||(41665582-41665636)
chr7 (339-393)||(46408923-46408977)
chr7 (298-393)||(9913559-9913655)
chr7 (298-393)||(9927247-9927343)
chr7 (304-393)||(43368235-43368326)
chr7 (241-286)||(41665496-41665541)
chr7 (239-287)||(16963289-16963337)
chr7 (305-386)||(17237117-17237200)
chr7 (341-389)||(21408635-21408683)
[»] scaffold0650 (1 HSPs)
scaffold0650 (304-393)||(1618-1709)
[»] scaffold0208 (1 HSPs)
scaffold0208 (298-393)||(2307-2404)
[»] scaffold0027 (1 HSPs)
scaffold0027 (298-393)||(15202-15299)
[»] scaffold0729 (1 HSPs)
scaffold0729 (305-393)||(4555-4645)
[»] scaffold0054 (1 HSPs)
scaffold0054 (298-393)||(23605-23702)
[»] scaffold0014 (1 HSPs)
scaffold0014 (298-393)||(101979-102076)
[»] scaffold0004 (1 HSPs)
scaffold0004 (307-393)||(372942-373030)
[»] scaffold0098 (1 HSPs)
scaffold0098 (305-393)||(51469-51558)
[»] scaffold0360 (1 HSPs)
scaffold0360 (339-393)||(15393-15447)
[»] scaffold0181 (1 HSPs)
scaffold0181 (298-393)||(19060-19156)
[»] scaffold0025 (1 HSPs)
scaffold0025 (298-390)||(5408-5503)
[»] scaffold0050 (1 HSPs)
scaffold0050 (305-386)||(42926-43009)
[»] scaffold0280 (1 HSPs)
scaffold0280 (305-393)||(13663-13753)
[»] scaffold0155 (1 HSPs)
scaffold0155 (342-391)||(33559-33608)
[»] scaffold0957 (1 HSPs)
scaffold0957 (298-393)||(2465-2561)


Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 7 - 393
Target Start/End: Original strand, 34683696 - 34684082
Alignment:
Q  7 atatgcgactgaatcacaataaatctcggtgtcatcttagttacccatctctatttaaatttcaacaatttagtttcaattacttttgttctatggtttt 106  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34683696 atatgcgactgaatcagaataaatctcggtgtcatcttagttacccatctctatttaaatttcaacaatttagtttcaattacttttgttctatggtttt 34683795  T
Q  107 tcattgaattgtttccggtatagttaaaatctgagaattgatagatatgtttctttcttttattagaatatgagttagtaactttgacatgactcagcag 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  34683796 tcattgaattgtttccggtatagttaaaatctgagaattgatagaaatgtttctttcttttattagaatatgagttagttactttgtgatgactcagcag 34683895  T
Q  207 agttcgttacannnnnnnnnnnnngcaaaagagttaaaaaataagggataggtcagaacaactctagttgtccagtgtttgtcaaactcta----gtaca 302  Q
    |||||||||||              ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||   |  | ||    |||||    
T  34683896 agttcgttacatttttttttttta-caaaagagttaaaaaataaaggataggtcagaccaactctagttgtccagtttttg---atttgtaaaaggtaca 34683991  T
Q  303 tgacaaactggaggcaagggacacggcaaaaactcgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34683992 tgacaaactggaggcaagggacacgacaaaaactcatttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtct 34684082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 24242791 - 24242694
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||||  ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  24242791 gtacaggacaaactggaggcaagggacacaacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 24242694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 32132382 - 32132479
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||| |||||||| |||||||||| |||||||||||||||||    
T  32132382 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaacacaactttttgtcccacgtacaagttgtct 32132479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 10960193 - 10960030
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||     | ||||| |     ||||| ||||||||| |||||||||||| | |||    
T  10960193 taaaaaatgaaggataggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaagggacaggacaa 10960094  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  10960093 aaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtct 10960030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 11279256 - 11279158
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| ||||||||||||||| |||||| | ||||||||| |  ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  11279256 agtacaggacaaactggaggcatgggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtct 11279158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 166925 - 167022
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| |||||||||||||   ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  166925 gtacaggacaaactagaggcaagggacataacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 167022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 2615023 - 2614926
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||| ||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  2615023 gtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 2614926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 3259810 - 3259713
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||| |  ||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  3259810 gtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtct 3259713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 10324113 - 10324210
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  10324113 gtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtct 10324210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 15276939 - 15277036
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||| | |||||||||||||||||    
T  15276939 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttttcccacgtacaagttgtct 15277036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 15277282 - 15277379
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||| | |||||||||||||||||    
T  15277282 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtct 15277379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 24203489 - 24203392
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  24203489 gtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 24203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 11382189 - 11382094
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| | ||| |  ||||||||||||||||| ||||||||||  ||||||||||||||||    
T  11382189 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctcaccaaaccacaacacaactttttgtctcacgtacaagttgtct 11382094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 3932809 - 3932906
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||||| || | ||||||||| |  ||||||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  3932809 gtacaggacaaactggaggcaaggggcaggacaaaaactcatatttttgtctctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 3932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 10485284 - 10485187
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  |||||||||||| ||||||||| || |||||||||| |||||||||||||||||    
T  10485284 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtct 10485187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 11212384 - 11212287
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||  |||||||| | ||||||||| |  ||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||    
T  11212384 gtacaggacaaactggagataagggacatgacaaaaactcatacttttgtccctcaccaaaccacaacataaccttttgtctcacgtgcaagttgtct 11212287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 17867962 - 17867865
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| |  |||||||| |  |||||||||||| ||||||||| || |||||||||| |||||||||| ||||||    
T  17867962 gtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtct 17867865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 17877745 - 17877648
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| |  |||||||| |  |||||||||||| ||||||||| || |||||||||| |||||||||| ||||||    
T  17877745 gtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtct 17877648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 18597164 - 18597257
Alignment:
Q  302 atgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| |||||||||||||| | ||||| ||    |||||||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  18597164 atgacaaaccggaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtct 18597257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 32409854 - 32409951
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||| ||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| ||||  |||||||||||    
T  32409854 gtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccactcacaagttgtct 32409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 34176957 - 34176860
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| |||| | ||||||||| |  ||||||| ||||||||| |||| || |||||||||| |||||||||||| ||||    
T  34176957 gtacatgacaaactggaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcccacgtacaagtagtct 34176860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 18057645 - 18057549
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| || | |||||||| | ||||||||| |  ||||||||||||||||||||||  | |||||||||| |||||||||||||||||    
T  18057645 tacatgacaaactagatgtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtct 18057549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 11613793 - 11613888
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||| ||||| ||||| ||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||    
T  11613793 gtacaggacaaaatggagacaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgt 11613888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 4494116 - 4494214
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaa-ctcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | |||||| ||| |  ||||||||||||||||||||||  | |||||||||| |||||||||||||||||    
T  4494116 gtacaggacaaactggaggcaagtgacaggacaaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtct 4494214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 17443389 - 17443292
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| || |||||||||| | ||||||||| |  |||| |||||||||||||||||  | |||||||||| |||||||||||||||||    
T  17443389 gtacaggacaaactagatgcaagggacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtct 17443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 3290789 - 3290702
Alignment:
Q  306 caaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||| | ||||||||| |  |||||||||| |||||||||||||| |||||||  | ||||||| |||||||||    
T  3290789 caaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt--tcccacgtataagttgtct 3290702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 31870109 - 31870199
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||| |||||||||||||   ||||||||    |||||||||||||||||||||||||| |||||||||| ||||||| | |||||||    
T  31870109 acaaactagaggcaagggacaaaacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtct 31870199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 8177926 - 8177980
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||| |||||||||||||| |||||||||| |||||| ||||||||||    
T  8177926 tttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtct 8177980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 14808046 - 14808100
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| | |||||||    
T  14808046 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtct 14808100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 14925458 - 14925555
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| || | |||||||| | ||||||||| |  ||||||||||||||||||||||  | |||||||||| |||| ||||||||||||    
T  14925458 gtacaggacaaactagatgtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtct 14925555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 9902666 - 9902757
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| |||| |||||||| | ||||||||  |  ||||||||||||  |||||||| || |||||||||| |||||||||||||||||    
T  9902666 gacaaactagaggtaagggacaggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtct 9902757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 11675376 - 11675467
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaag 387  Q
    ||||| |||||||||||||||| ||||| | ||||||||  |  ||||||| |||||||||||| |||| |||||||| | |||||||||||    
T  11675376 gtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttgtctctcaccaaaccataacacaactttttatcccacgtacaag 11675467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 29054477 - 29054386
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |||| |||||||||| | ||||||||    |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||    
T  29054477 gacaaattggaagcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttgtct 29054386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 34684135 - 34684201
Alignment:
Q  446 tactcattgttataaaattttt-atcaggtgttgttatgccttatgttgtggtgttctgtcttgtac 511  Q
    |||||||||| ||||| ||||| |||  ||||||||||||||||||||||| ||| |||||||||||    
T  34684135 tactcattgtcataaacttttttatcctgtgttgttatgccttatgttgtgttgtcctgtcttgtac 34684201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 3379836 - 3379740
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| ||||||||||||||||| |||| | ||||||||  |  ||||||| |||||||||||| | || ||||||||||  ||| ||||||||||||    
T  3379836 tacaggacaaactggaggcaagagacaagacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacatacaagttgtct 3379740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 511
Target Start/End: Original strand, 15277099 - 15277153
Alignment:
Q  457 ataaaatttttatcaggtgttgttatgccttatgttgtggtgttctgtcttgtac 511  Q
    ||||||||||| ||| |||||||| |||||||||||||  |||||| ||||||||    
T  15277099 ataaaatttttgtcatgtgttgttctgccttatgttgtactgttctatcttgtac 15277153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 33041461 - 33041413
Alignment:
Q  239 gttaaaaaataagggataggtcagaacaactctagttgtccagtgtttg 287  Q
    |||||||||| | | ||||| ||||||||||| ||||||||||||||||    
T  33041461 gttaaaaaatgaagaataggacagaacaactccagttgtccagtgtttg 33041413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 393
Target Start/End: Original strand, 26981369 - 26981769
Alignment:
Q  7 atatgcgactgaatcacaataaatctcggtgtcatcttagttacccatctctatttaaatttcaacaatttagtttcaattacttttgttctatggtttt 106  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  26981369 atatgcgactgaatcagaataaatctcggtgtcatcttagttacccttctctctttaaatttcaacaatttagtttcaattactcttgttctatggtttt 26981468  T
Q  107 tcattgaattgtttccggtatagttaaaatctgagaattgatagatatgtttctttcttttattagaatatgagttagtaactttgacatgactcagcag 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||  ||||||||||||    
T  26981469 tcattgaattgtttccggtatagttaaaatctgagaattgatagaaatgtttctttcttttattagaatatgagttagctactttgtgatgactcagcag 26981568  T
Q  207 agttcgttaca---nnnnnnnnnnnnngcaaaagagttaaaaaataagggataggtcagaacaactctagttgtccagtg-----tttgtcaaac---tc 295  Q
    |||||||||||                 ||||||||||||||||| | ||| ||  ||||||||||| ||||||||||||     ||||| ||||   ||    
T  26981569 agttcgttacactttttttttttttttacaaaagagttaaaaaatgaaggacagaacagaacaactccagttgtccagtgtttgatttgtaaaactgttc 26981668  T
Q  296 tag-tacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtc 392  Q
     || |||| ||||||| ||||||||  |||| | |||||||||   |||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  26981669 cagatacaagacaaacgggaggcaaatgacatgacaaaaactcatatttttgtccctcaccaaaccacaacaaaactttttgttctacgtacaagttgtc 26981768  T
Q  393 t 393  Q
    |    
T  26981769 t 26981769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 239 - 393
Target Start/End: Original strand, 9732825 - 9732990
Alignment:
Q  239 gttaaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggc 329  Q
    |||||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||||||||||||||||| | |    
T  9732825 gttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagac 9732924  T
Q  330 aaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  9732925 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 9732990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 17540843 - 17540745
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  17540843 agtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 17540745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 5278797 - 5278894
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || || ||||||| |||||||||||||||||    
T  5278797 gtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattttttgtcccacgtacaagttgtct 5278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 242 - 393
Target Start/End: Complemental strand, 37308847 - 37308685
Alignment:
Q  242 aaaaaataagggataggtcagaacaactctagttgtccagtg-----tttgtcaaac----tctagtacatgacaaactggaggcaagggacacggcaaa 332  Q
    ||||||| | ||| ||| ||||||||||||||||||||||||     ||||| ||||    ||  ||||| |||||||||||||||||||||| | ||||    
T  37308847 aaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaa 37308748  T
Q  333 aactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||   |||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  37308747 aactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtct 37308685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 7761470 - 7761633
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     |||||||||||||| ||||||||||||| | |||    
T  7761470 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacaggacaa 7761569  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  7761570 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtct 7761633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 3913427 - 3913520
Alignment:
Q  302 atgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||  ||| | |||||||||   | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3913427 atgacaaactggaggcaagaaacaggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtct 3913520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 7259024 - 7258927
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  7259024 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtct 7258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 32498042 - 32497945
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||| |||||||||||| | ||||||||| |  |||||| ||||||||||||||| || |||||||||| |||||||||||||||||    
T  32498042 gtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 32497945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 35114912 - 35114815
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  35114912 gtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtct 35114815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 40692424 - 40692327
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||| ||||||||| | |||||||||||  ||||||||||||||||||||||  | |||||||||| |||||||||||||||||    
T  40692424 gtacaagacaaactggagacaagggacaggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactttttgtcccacgtacaagttgtct 40692327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 42706486 - 42706389
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||| | | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  42706486 gtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtct 42706389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 33889369 - 33889273
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||||||||||||||||||| | ||||||||| |  |||| ||||||||||||||||| || |||||||||| |||||||||||||||||    
T  33889369 tacaggacaaactggaggcaagggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 33889273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 34339003 - 34338840
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||||||||||||||||| | |||    
T  34339003 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaa 34338904  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||| |||||||||||||||| || |||||||||| ||||| |||||||||||    
T  34338903 aaactcatatttttgaccctcaccaaaccacagcacaactttttgtcccacgcacaagttgtct 34338840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 18685963 - 18685866
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||| ||||| | ||||||||| |  ||||||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  18685963 gtacaggacaaactggaggcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 18685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 19513652 - 19513749
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||| |||||||| ||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  19513652 gtacaggacaaacgggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 19513749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 33366737 - 33366640
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||| |||||||||||||||||| |||||||| | |||| ||||||||||||    
T  33366737 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacatacaagttgtct 33366640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 44284756 - 44284659
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||||| |||||||| || ||||||||||  ||||||||||||||||    
T  44284756 gtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtct 44284659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 32766467 - 32766565
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataac-tttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||| | ||||||||    |||||||||||||||||||||||||| ||| ||||||| | ||||||| |||||||    
T  32766467 gtacatgacaaactggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttttgtcctacgtacaggttgtct 32766565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 40832432 - 40832529
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | |||||||   |  ||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||    
T  40832432 gtacaagacaaactggaggcaagggacaggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtct 40832529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 42365704 - 42365607
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||| | |||||||||   ||||||||| ||| |||||||||||| |||||||| |  |||| |||||||||||    
T  42365704 gtacatgacaaactggaggcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttgtct 42365607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 11114998 - 11114902
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||||||||||||||||||| | |||||| || |  |||||| ||||||||||||||| || |||||||||| ||||| |||||||||||    
T  11114998 tacaggacaaactggaggcaagggacaggacaaaaaatcatatttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtct 11114902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 16104400 - 16104304
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||| ||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||| ||||||    
T  16104400 tacacgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtct 16104304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 30326295 - 30326391
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt-ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||| |||||| | ||||||||| | ||||||| ||| |||||||||| || ||||||||||  ||||||||||||||||    
T  30326295 gtacaggacaaactggaggcaggggacaggacaaaaactcatattttgtctctcgccaaaccacagcacaactttttgtctcacgtacaagttgtct 30326391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 38993040 - 38993131
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| | ||||||||    ||||||| ||||  |||||||||||| |||||||||| |||||||||||||||||    
T  38993040 gacaaactggaggcaagggacaggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgtct 38993131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 6896288 - 6896198
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| |  |||||||    ||||||||||||||||||| ||| || |||||||||| |||||||||||||||||    
T  6896288 acaaactggaggcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttgtct 6896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 9717309 - 9717254
Alignment:
Q  338 gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  9717309 gtttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 9717254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 30798451 - 30798545
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaa-ctcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    |||||||||||||||||||||||||||| |  ||||| ||| |  |||||||||||||||||||||| || |||||||| | |||||||||||||    
T  30798451 gtacatgacaaactggaggcaagggacaggaaaaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagtt 30798545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 2645050 - 2645146
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||| | | | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||| ||||||||||||    
T  2645050 gtacaggacaaactggaggcaagg-agaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtct 2645146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 37003874 - 37003928
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  37003874 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtct 37003928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 26419037 - 26418953
Alignment:
Q  311 tggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||| ||||||| | ||||||||| |  |||||| ||||||||||||||| || |||||||||| |||||||||||||||||    
T  26419037 tggaggcgagggacatgacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 26418953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 12672443 - 12672534
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||  | ||||| ||| |  ||||||||||||||||||||||||| || ||||| | ||| |||||||||||||    
T  12672443 gacaaactggaggcaagggacgggacaaaatctcatatttttgtccctcaccaaaccacaacacaagtttttatcccaagtacaagttgtct 12672534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 41366075 - 41366170
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| || | | ||||||||    |||||||||||||||||||||||||| || |||||||  ||| ||||||||||||    
T  41366075 acatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttgtct 41366170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 1247231 - 1247177
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||  || |||||||||| |||||||||||||||||    
T  1247231 tttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtct 1247177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 27082105 - 27082022
Alignment:
Q  102 gtttttcattgaattgtttccggtatagttaaaatctgagaattgatagatatgtt----tctttcttttattagaatatgagt 181  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||| |||||  ||||    ||||||||||||||||| ||||||    
T  27082105 gtttttccttgaattgtttcctgtatagttaaaatgtgagaattcatagaattgtttctatctttcttttattagaaaatgagt 27082022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 27082189 - 27082143
Alignment:
Q  32 tcggtgtcatcttagttacccatctctatttaaatttcaacaattta 78  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  27082189 tcggtgtcatcttagttacccttctctctttaaatttcaacaattta 27082143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 38623310 - 38623364
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || |||||||||| |||| ||||||||||||    
T  38623310 tttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtct 38623364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 8112420 - 8112344
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttcca 379  Q
    |||||||||||||||| ||||   ||||||||| |  ||||||| ||||||||||||||||| ||||||||||||||    
T  8112420 acaaactggaggcaagagacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgttcca 8112344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 389
Target Start/End: Complemental strand, 13829621 - 13829472
Alignment:
Q  239 gttaaaaaataagggataggtcagaacaactctagttgtccagtgtttgtcaaactctagtacatgacaaactggaggcaagggacacggcaaaaact-- 336  Q
    |||||||||| | ||| ||| ||||||||||||||||||||||||||||   |  | |   ||| ||||||||||||| |||||||| | ||||||||      
T  13829621 gttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttg---atttgtgaaacaggacaaactggaggtaagggacaggacaaaaactga 13829525  T
Q  337 cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
      ||||||||| |||| | |||||| || |||||||||| ||| |||||||||    
T  13829524 aatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagtt 13829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 16177845 - 16177943
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| || ||||||||||||| ||||| | || |||||    |||||||| || |||||||||||||| ||||||||||  ||||||||||||||||    
T  16177845 agtacaggataaactggaggcaatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtct 16177943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 393
Target Start/End: Original strand, 12939275 - 12939360
Alignment:
Q  310 ctggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||| | ||||||||  |  |||||||| ||||||||||||| || |||||||| |  ||||||||||||||||    
T  12939275 ctggaggcaagggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtct 12939360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 27462765 - 27462842
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaac--tcgtttttgtccctcaccaaaccacaacataacttttt 373  Q
    ||||||||||||||| || ||||||||| | ||||| |  |  |||||||||||||||||||||||||| ||||||||    
T  27462765 gtacatgacaaactgtagacaagggacaagacaaaagctgttatttttgtccctcaccaaaccacaacacaacttttt 27462842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 39461441 - 39461376
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgtttttgtccctcaccaaaccacaaca 364  Q
    ||||| ||||||||||||||||| |||| | |||||| | ||||||||||||||||||| |||||||    
T  39461441 gtacaggacaaactggaggcaagtgacaggacaaaaatt-gtttttgtccctcaccaaatcacaaca 39461376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 28824531 - 28824617
Alignment:
Q  309 actggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||| |||||| || | ||||||||| |  |||||||||||||||||||||| || |||||||| |  ||||| ||||||||||    
T  28824531 actggagtcaagggtcaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatctcacgtgcaagttgtct 28824617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 2086156 - 2086102
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||  ||||||||||  | ||||||||||| ||||||||||||||||    
T  2086156 tttttgtccctacccaaaccacagtacaactttttgtttcacgtacaagttgtct 2086102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 26418901 - 26418839
Alignment:
Q  446 tactcattgttataaaatttttatcaggtgttgttatgccttatgttgtggtgttctgtcttg 508  Q
    |||||||||  ||||||||||| ||| |||||||| ||||||  |||||| ||||||||||||    
T  26418901 tactcattgccataaaatttttgtcatgtgttgttctgccttgcgttgtgctgttctgtcttg 26418839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 40767241 - 40767207
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataacttttt 373  Q
    |||||||||||||| ||||||||||||||||||||    
T  40767241 tttttgtccctcactaaaccacaacataacttttt 40767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 4641600 - 4641548
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    |||||||| |||||||||||||| || ||||||||||  ||| ||||||||||    
T  4641600 tttttgtctctcaccaaaccacagcacaactttttgtctcacatacaagttgt 4641548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 45463116 - 45463152
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgt 375  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  45463116 tttttgtcactcaccaaaccacaacacaactttttgt 45463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 35701450 - 35701307
Alignment:
Q  261 agaacaactctagttgtccagtgtttg-----tcaaact----ctagtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccct 349  Q
    |||||||||||||||||||||||||||     | |||||    || ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||    
T  35701450 agaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccct 35701351  T
Q  350 caccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35701350 caccaaaccacaacataactttttgttccacgtacaagttgtct 35701307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 263 - 393
Target Start/End: Original strand, 5571582 - 5571710
Alignment:
Q  263 aacaactctagttgtccagtgtttgtcaaactctagtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccac 360  Q
    |||||||||||||||||||||||||    | ||  ||||| |||||||||||||||||||||| | |||||| || |  |||||||||||||||||||||    
T  5571582 aacaactctagttgtccagtgtttg----attcaggtacaggacaaactggaggcaagggacaggacaaaaattcatatttttgtccctcaccaaaccac 5571677  T
Q  361 aacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||||||| | |||||||||||||||    
T  5571678 aacacaactttttgtccaacgtacaagttgtct 5571710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 7523365 - 7523202
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| |||||||| |||||||||||||||||||     | ||||| |     ||||| |||||||||||||||||||||| | |||    
T  7523365 taaaaaatgaaggataggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaa 7523266  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  7523265 aaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 7523202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 8137030 - 8136867
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttgtc-----aaactct---ag-tacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| |||||||||||||||||||||||||||||      ||||| |   || |||| ||||||||||||||||| |||| | |||    
T  8137030 taaaaaatgaaggataggacagaacaactctagttgtccagtgtttgttttgtaaaactgtttcagatacaggacaaactggaggcaagagacaggacaa 8136931  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  8136930 aaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtct 8136867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 21739130 - 21739227
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  21739130 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 21739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 31770560 - 31770657
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  31770560 gtacaagacaaactggaggcaagggacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 31770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 32528842 - 32528745
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||| ||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  32528842 gtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 32528745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 553525 - 553427
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| ||||||||||||||||| |||| | ||||||||| |  ||||||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  553525 agtacaggacaaactggaggcaagagacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 553427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 4689667 - 4689761
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttg 390  Q
    ||||| |||||||||||||||||||||| | ||||||| | |  ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  4689667 gtacaagacaaactggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 4689761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 11963534 - 11963371
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||||||||||||||||| | |||    
T  11963534 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaa 11963435  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || |||||||||| |||||| ||||||||||    
T  11963434 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtgcaagttgtct 11963371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 4818109 - 4818206
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||| ||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  4818109 gtacaagacaaactggaggcaaggaacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 4818206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 24181593 - 24181690
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||| ||||||||| | ||||||||| |  |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  24181593 gtacaggacaaactggagccaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtataagttgtct 24181690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 393
Target Start/End: Original strand, 28090497 - 28090586
Alignment:
Q  306 caaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||| | ||||||||| |  |||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  28090497 caaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtct 28090586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 298 - 392
Target Start/End: Original strand, 6284267 - 6284363
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgtttt--tgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtc 392  Q
    ||||| ||||||||||||||| |||||| | ||||||||  ||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  6284267 gtacaggacaaactggaggcatgggacaggacaaaaacttatttttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtc 6284363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 39918633 - 39918537
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  39918633 tacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtct 39918537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 2351801 - 2351710
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||| |||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  2351801 gacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 2351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 34795014 - 34794917
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| ||||||| |||||||||    
T  34795014 gtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtataagttgtct 34794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 39788320 - 39788223
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||| |||||| ||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  39788320 gtacaggacaaactgtaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 39788223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 41459715 - 41459619
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||||||||  | ||||||||   ||||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  41459715 gtacaggacaaactggaggcaagggaca-agaaaaaactcatatttttgtccctcaccaaaccagagcacaactttttgttccacgtacaagttgtct 41459619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 5673266 - 5673178
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtac 384  Q
    ||||| || ||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||||    
T  5673266 gtacacgataaactggaggcaagggacaagtcaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtac 5673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 7770248 - 7770342
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttg 390  Q
    ||||| |||||||||||||||||||||| | ||||||| | |  |||||||| ||||||||||||| || |||||||||| ||||||||||||||    
T  7770248 gtacaggacaaactggaggcaagggacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttg 7770342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 29241505 - 29241411
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttg 390  Q
    |||||||||||| ||||||||||||||| | ||||| ||| |  ||||||||||| |||||||||| || |||||||||| ||||||||||||||    
T  29241505 gtacatgacaaattggaggcaagggacaggccaaaagctcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttg 29241411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 3735484 - 3735387
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||| ||||||||| ||||| | ||||||||  |  |||||||| ||||||||||||| || |||||||||| |||||||||||||||||    
T  3735484 gtacatgacaaaatggaggcaatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 3735387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 31880045 - 31880142
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||| |  |||||||||||||||||||||| || |||| ||||| | |||||||||||||||    
T  31880045 gtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactatttgtcctacgtacaagttgtct 31880142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 40489458 - 40489367
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||  | ||||||||| |  ||||||||||||||||| |||| || |||||||||| |||| ||||||||||||    
T  40489458 gacaaactggaggcaagggacgggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtct 40489367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 22493322 - 22493485
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgttt-----gtcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| |||||||||||||||||||||||||||     || ||||| |     ||||| || ||||||||| ||| ||||| | |||    
T  22493322 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggataaactggagccaaaggacaagacaa 22493421  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  22493422 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtct 22493485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 24036350 - 24036260
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||| | ||||| ||| |  |||||||||||||||||||||| || |||||||| | |||||||||||||||||    
T  24036350 acaaattggaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtct 24036260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 41790430 - 41790528
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| ||||||||||||||||   ||| | ||||||||| |  ||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  41790430 agtacaggacaaactggaggcaataaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtct 41790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 31644530 - 31644476
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  31644530 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 31644476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 7725785 - 7725875
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||| |||||||||| | ||||||||| |  |||||||| |||  ||||||||||| |||||||||| ||||||| |||||||||    
T  7725785 acaaactggatgcaagggacatgacaaaaactcatatttttgtccttcattaaaccacaacacaactttttgtcccacgtataagttgtct 7725875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 18470404 - 18470494
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| |||||||||||| | ||||||||    ||||||||||| ||||||||||| || |||||||| | |||||||||||||||||    
T  18470404 acaaactgaaggcaagggacaagacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtct 18470494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 7208242 - 7208296
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  7208242 tttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtct 7208296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 8560994 - 8561048
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||| ||||||||||||||| || |||||||||||||| |||||||||||||    
T  8560994 tttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtct 8561048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 23091273 - 23091370
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||||||||||||||||| | ||||||||| |  |||||||| ||| |||||||||||| ||||||||||  |||||| || ||||||    
T  23091273 gtacaggataaactggaggcaagggacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttttgtctcacgtataaattgtct 23091370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 40182548 - 40182494
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || |||||||||| ||| |||||||||||||    
T  40182548 tttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtct 40182494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 700613 - 700663
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    ||||||| |||||||||||||||||| ||||||||||  ||||||||||||    
T  700613 tttttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagtt 700663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 22432287 - 22432375
Alignment:
Q  307 aaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||| |||| | ||||||||  |  |||||||||||| |||||||||||| || |||||||  || |||||||||||||    
T  22432287 aaactggaggcaagagacaggacaaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtct 22432375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 511
Target Start/End: Original strand, 4689842 - 4689880
Alignment:
Q  473 gtgttgttatgccttatgttgtggtgttctgtcttgtac 511  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  4689842 gtgttgttctgccttatgttgtgttgttctgtcttgtac 4689880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 27839085 - 27839139
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| || | ||||||||||  || |||||||||||||    
T  27839085 tttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtct 27839139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 8673033 - 8673130
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  8673033 gtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 8673130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 34101635 - 34101538
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||||||||   ||||||||| |  |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34101635 gtacaggacaaactggaggcaagggacaacacaaaaactcatatttttgtccctcaccaaaccacaacataacttttttttccacgtacaagttgtct 34101538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 4052673 - 4052510
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||| ||||||||||||||| | |||    
T  4052673 taaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaa 4052574  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  4052573 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 4052510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 14005022 - 14005119
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  14005022 gtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 14005119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 29563204 - 29563301
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  29563204 gtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 29563301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 30543000 - 30543097
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| ||||| | ||||||||| |  ||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  30543000 gtacatgacaaactggaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtct 30543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 393
Target Start/End: Complemental strand, 34063302 - 34063158
Alignment:
Q  260 cagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccc 348  Q
    ||||||||||||||||||||||||||||     | |||||||     ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||    
T  34063302 cagaacaactctagttgtccagtgtttgatttgtaaaactctttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccc 34063203  T
Q  349 tcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    || |||||||||| || |||||||||| |||||||||||||||||    
T  34063202 tcgccaaaccacagcacaactttttgtcccacgtacaagttgtct 34063158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 7394792 - 7394889
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||||||||| |||| ||||||||||  ||||||||||||||||    
T  7394792 gtacatgacaaactagaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttgtct 7394889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 27104086 - 27103989
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||  || |||||||||| |||||||||||||||||    
T  27104086 gtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtct 27103989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 29672301 - 29672394
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  29672301 gtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagtt 29672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 37664261 - 37664358
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  37664261 gtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 37664358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 392
Target Start/End: Complemental strand, 17520718 - 17520626
Alignment:
Q  301 catgacaaactggaggcaagggacacggcaaaaactcgt-ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtc 392  Q
    ||||| ||| ||||||||||||||| ||||||||||  | ||||||||||||||||||||||||| |||||||||| |||| |||||||||||    
T  17520718 catgataaaatggaggcaagggacagggcaaaaacttatattttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtc 17520626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 30501272 - 30501178
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttg 390  Q
    ||||| |||||||||||||||||||||| | ||||||| | |  |||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  30501272 gtacaagacaaactggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 30501178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 31513565 - 31513658
Alignment:
Q  302 atgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| | | |||||||||||||    
T  31513565 atgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcctaggtacaagttgtct 31513658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 45446582 - 45446485
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| |  |||||||| |  |||||| ||||||||||||||| || |||||||||| |||||||||||||||||    
T  45446582 gtacacgacaaactggaggcaagggacaggataaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 45446485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 5968776 - 5968939
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| || |||||||||||||||||||||||||     | ||||| |     |||||||||||||| ||||||||||||| | |||    
T  5968776 taaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactagaggcaagggacaggacaa 5968875  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||| ||||||||||||| || |||||||| | |||||||||| ||||||    
T  5968876 aaactcatatttttgtccttcaccaaaccacagcacaactttttatcccacgtacaaattgtct 5968939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 10467257 - 10467094
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| ||||||||||||||||| |||| | |||    
T  10467257 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaagacaa 10467158  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||  |  |||||| ||||| |||||||||||| |||||||||| |||||||||||||||||    
T  10467157 aaactgatatttttgttcctcagcaaaccacaacacaactttttgtcccacgtacaagttgtct 10467094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 13406847 - 13407010
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgttt-----gtcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| ||||||||||||||||||| |||||||     || ||||| |     ||| |||||||||||||||||||| |||   |||    
T  13406847 taaaaaatgaaggatagggcagaacaactctagttgtctagtgtttaatttgtaaaactgtttcaggtatatgacaaactggaggcaaggaacagaacaa 13406946  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| ||||| |||||||  ||||||||||||||||    
T  13406947 aaactcatatttttgtccctcaccaaaccacagcataattttttgtctcacgtacaagttgtct 13407010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 29611040 - 29611130
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| | ||||||||    |||||||||||| ||||||||||||| |||||||||| ||||||| |||||||||    
T  29611040 acaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttgtct 29611130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 32019979 - 32020076
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||| |||||||  | | ||||||||| |  |||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  32019979 gtacaggacaaactggaagcaaggggtaggacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgttccacgtacaagttgtct 32020076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 32303606 - 32303660
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  32303606 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 32303660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 37861986 - 37861889
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||| |  |||| ||||||||||||||||| ||||||| ||||| | |||||||||||||||    
T  37861986 gtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttatccctcaccaaaccacatcataactatttgtcctacgtacaagttgtct 37861889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 39643010 - 39642913
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| |  |||||||    |||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  39643010 gtacaggacaaactggaggcaagggacaagataaaaactgatatttttgtccctcaccaaaccacaacacaactttctgtcccacgtacaggttgtct 39642913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 41548744 - 41548648
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| |||| | ||||||||  |  |||||| ||||| || ||||||||| |||||||||| |||||||||||||||||    
T  41548744 tacatgacaaactggaggcaagagacaggacaaaaactgatatttttgtacctcagcagaccacaacacaactttttgtcccacgtacaagttgtct 41548648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 37618370 - 37618465
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||| ||||||||| ||||| | ||||||||  |  ||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  37618370 gtacaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgt 37618465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 3251568 - 3251731
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||||     | ||||| |     ||||| ||||||||||||||||| ||||   |||    
T  3251568 taaaaaataaaggataagacagaacaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaactggaggcaagcgacagaacaa 3251667  T
Q  332 aaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||    ||||||||||||||||||||||| || |||||||| | | |||||||||||||||    
T  3251668 aaacttatatttttgtccctcaccaaaccacatcacaactttttatcctacgtacaagttgtct 3251731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 241 - 389
Target Start/End: Complemental strand, 41709970 - 41709811
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| ||||||||||||||||  |||| | |||    
T  41709970 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaatgacaggacaa 41709871  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    |||||| |  |||||||||||||||||||||| || |||||||||| | |||||||||||    
T  41709870 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtccaacgtacaagtt 41709811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 6386660 - 6386606
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  6386660 tttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtct 6386606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 12753303 - 12753400
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||| ||||||  |||| | ||||||||| |  |||||| |||||||||||||||||| |||||||||| |||| ||||||||||||    
T  12753303 gtacaggacaaactgaaggcaaatgacaagacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtct 12753400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 15001550 - 15001500
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  15001550 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagtt 15001500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 21272768 - 21272714
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  21272768 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 21272714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 31732185 - 31732094
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| ||||||||||||| | ||||||||| |  ||||||||||||||||||||||  | ||||||||||  ||| ||||||||||||    
T  31732185 gacaaacttgaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtct 31732094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 35225783 - 35225692
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| | ||||||||    |||||||||||| |||||||||| || ||||||||||  || |||||||||||||    
T  35225783 gacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttgtct 35225692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 17805819 - 17805721
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |||||||| ||||||||||||| | ||||||||| |  |||||| ||||||||||||| | || |||| |||||  ||||||||||||||||    
T  17805819 agtacaggacaaactagaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtct 17805721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 7591425 - 7591522
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  |||||| ||||| |||||||||||| ||||||||||  |||||| |||||||||    
T  7591425 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtct 7591522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 25478370 - 25478273
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||| ||||||||| |  |||||||| |  |||||||||||| |||| |||| || |||||||||| | |||||||||||||||    
T  25478370 gtacaggacaaactggagacaagggacaggaaaaaaactcatatttttgtccctcatcaaatcacagcacaactttttgtcctacgtacaagttgtct 25478273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 40389167 - 40389072
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||||||||||||| ||||| | ||||||||  |  |||| || |||||||||||||| || |||||||||| |||| ||||||||||    
T  40389167 gtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacatacaagttgt 40389072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 10932819 - 10932766
Alignment:
Q  340 ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| |||||||| || ||||||| ||||||||||||| ||||||    
T  10932819 ttttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtct 10932766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 10656666 - 10656761
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||| |||||||  |||| | ||||||||    ||||||||| |||| ||||||||||| ||||||||||  ||||||||| ||||||    
T  10656666 acatgacaaactagaggcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtct 10656761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 16595134 - 16595220
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    |||||||| |||||||||||| | |||||||  |   ||||||||||| | || |||||||| |||||||||| |||||||||||||    
T  16595134 acaaactgtaggcaagggacaggacaaaaacatgaagttttgtccctcgctaatccacaacacaactttttgtcccacgtacaagtt 16595220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 22999385 - 22999287
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataac-tttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||    ||||||||||||| ||||||| | || ||| ||||||| |||||||||| ||||||    
T  22999385 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccatagcaaaacttttttgtcccacgtacaacttgtct 22999287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 35225855 - 35225809
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg 287  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||    
T  35225855 taaaaaatgaaggataggacagaacaactccagttgtccagtgtttg 35225809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 38047539 - 38047493
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg 287  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  38047539 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttg 38047493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 10320304 - 10320352
Alignment:
Q  345 tccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||| ||||||||    ||||||||||||||||    
T  10320304 tccctcaccaaaccacaacacaactttttaccacacgtacaagttgtct 10320352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 27109562 - 27109614
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||||| ||| |||||||||||||| |||||||||| || ||||||| ||||    
T  27109562 tttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgt 27109614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 9e-28; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 38812716 - 38812553
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||||| ||| ||| || |||||||||||||||||||||||||     | ||||| |     ||||| |||||||||||||||||||||| | |||    
T  38812716 taaaaaataaaggacaggacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaa 38812617  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  38812616 aaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 38812553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 2725023 - 2725185
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | |||||||     ||||| |||||||||||||||||||||| | |||    
T  2725023 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaagggacaggacaa 2725122  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  2725123 aaactcatatttttgtccctcaccaaaccacatcacaactttttg-tccacgtacaagttgtct 2725185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 21202869 - 21202772
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  21202869 gtacaggacaaactggaggcaagagacaggacaaaaactcataattttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 21202772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 24002469 - 24002372
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  24002469 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 24002372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 33176988 - 33177085
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  33176988 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttgtct 33177085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 49152056 - 49152153
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||| |||||||||||| ||||||||| |  ||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  49152056 gtacaagacaaactggatgcaagggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtct 49152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 50727869 - 50727966
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||| |||||||||||| | ||||||||| |  |||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  50727869 gtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtct 50727966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 50735883 - 50735980
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||| |||||||||||| | ||||||||| |  |||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  50735883 gtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtct 50735980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 55065288 - 55065386
Alignment:
Q  298 gtacatgacaaactggagg-caagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||| ||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  55065288 gtacaagacaaactggagggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 55065386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 20802487 - 20802584
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  20802487 gtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 20802584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 23522010 - 23521913
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||| |||||||| | | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  23522010 gtacaggacaaactggaagcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 23521913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 52319453 - 52319356
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | | ||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  52319453 gtacaggacaaactggaggcaagggacaggacgaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 52319356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 6776701 - 6776611
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  6776701 acaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtct 6776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 26083462 - 26083372
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| | ||||||||    ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  26083462 acaaactggaggcaagggacatgacaaaaactgaaatttttgtccctcaccaaaccacagcataactttttgtcccacttacaagttgtct 26083372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 4325921 - 4325824
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||| |  |||||||| |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||||||||    
T  4325921 gtacatgacaaactggaggcaagggacaggagaaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttgtct 4325824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 24210449 - 24210352
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgtttt--tgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| | ||  ||||||||||||||||||| || |||||||| | |||||||||||||||||    
T  24210449 gtacaggacaaactggaggcaagggacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtct 24210352  T

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Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 29785493 - 29785590
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||| |||||||||   ||||||||| |  ||||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  29785493 gtacaggacaaactggagacaagggacagaacaaaaactcatatttttgtccctcaccaaaccacaacacagctttttgtcccacgtacaagttgtct 29785590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 33552798 - 33552895
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||| |||| |||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  33552798 gtacaggacaaattggatgcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 33552895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 36743644 - 36743741
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | |||||| || |  |||||||||||||||||| ||| || |||||||||| |||||||||||||||||    
T  36743644 gtacaggacaaactggaggcaagggacatgacaaaaattcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtct 36743741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 36886062 - 36885965
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||| | |||||||||| ||||||    
T  36886062 gtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattgtct 36885965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 37865883 - 37865786
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||| ||||||||||| |||| | ||||||||| |  ||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||    
T  37865883 gtacatgacaatctggaggcaagagacatgacaaaaactcatatttttgtccctcaccaaatcacaacacaactttttgtcccatgtacaagttgtct 37865786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 52949850 - 52949753
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  |||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  52949850 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtct 52949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 55594015 - 55593918
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgttttt--gtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| ||||||||||||||||||| | ||||||||| | |||  |||||||||||||||||| || |||||||| | |||||||||||||||||    
T  55594015 gtacatgataaactggaggcaagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtct 55593918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 56154751 - 56154654
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || |||||||||||||||||||   ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  56154751 gtacaggaaaaactggaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 56154654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 1231507 - 1231344
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||||     | ||||| |     ||||| || |||||||||||||| |||  | |||    
T  1231507 taaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagagactggacaa 1231408  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||||||||||| |||||||| || |||||||||| |||||||||||||||||    
T  1231407 aaactcatatttttgtccctcacaaaaccacagcacaactttttgtcccacgtacaagttgtct 1231344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 3649759 - 3649669
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| |||||||||||| | ||||||||    ||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  3649759 acaaactgaaggcaagggacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 3649669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 32181394 - 32181296
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |||||||| || |||||||||| | ||||||||| |  ||||||||||||||||||||||  | |||||||||| |||||||||||||||||    
T  32181394 agtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtct 32181296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 12601016 - 12600919
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||  |||||||| | ||||||||| |  |||||||||||| |||||||||||| ||||||||||  ||||||||||||||||    
T  12601016 gtacaggacaaactggagataagggacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtct 12600919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 20517978 - 20518075
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | |||||| || |  ||||||||||||||||| |||| |||||||| |||| |||||||||||||||||    
T  20517978 gtacaagacaaactggaggcaagagacaggacaaaaagtcatatttttgtccctcaccaaatcacagcataacttcttgtcccacgtacaagttgtct 20518075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 20694501 - 20694404
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||| |||||| ||||| | ||||||||| |  ||||||||||||||||||||||||  |||||||||| | |||||||||||||||    
T  20694501 gtacaggacaaactgaaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtct 20694404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 21580156 - 21580059
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||| ||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||| ||||||    
T  21580156 gtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaaattgtct 21580059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 28115382 - 28115285
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| |  ||||| |  |  ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  28115382 gtacaagacaaactggaggcaagggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtct 28115285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 38486213 - 38486310
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||   |||||||||||||||    
T  38486213 gtacaggataaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtct 38486310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 44649120 - 44649217
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  |||||||||||| |||||||||||| |||||||||| ||| |||||||||||||    
T  44649120 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtct 44649217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 46680466 - 46680563
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||| ||||||||||| || ||||||||||  ||||||||| ||||||    
T  46680466 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcacgtacaaattgtct 46680563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 36497413 - 36497250
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| || |||||||||||||||||||||||||     | ||||| |     ||||| |||||||||||| |||| |||| | |||    
T  36497413 taaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagagacaggacaa 36497314  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || |||||||||| | || ||||||||||||    
T  36497313 aaactcatatttttgtccctcaccaaaccacatcacaactttttgtccaacatacaagttgtct 36497250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 382
Target Start/End: Complemental strand, 42772918 - 42772832
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgt 382  Q
    |||||||||||||| |||||||| |||| | ||||||||| |  |||||||| |||||||||||||||| |||||||||| ||||||    
T  42772918 gtacatgacaaacttgaggcaagagacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtcccacgt 42772832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 54543120 - 54543023
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |||||| ||||||||||||||| | |||||||||   ||||||||||||||||||||| | || ||| |||||| |||||||||||||||||    
T  54543120 agtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaac-ttttgtcccacgtacaagttgtct 54543023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 9512296 - 9512393
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||||||||||||  ||| | ||||||||| |  |||||||| ||||||||||||| || |||||||||| |||||||||||||||||    
T  9512296 gtacaagataaactggaggcaagtaacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 9512393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 16320640 - 16320555
Alignment:
Q  307 aaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttg 390  Q
    ||||||||||||||||||| |  |||||||    |||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  16320640 aaactggaggcaagggacaggataaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttg 16320555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 43641186 - 43641132
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  43641186 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 43641132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 47642490 - 47642544
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  47642490 tttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtct 47642544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 44324341 - 44324393
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||    
T  44324341 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgt 44324393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 50186652 - 50186561
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| ||||||||||||  |  |||||||| |  ||||||||||||||||||||||||| |||||||| | |||| ||||||||||||    
T  50186652 gacaaactagaggcaagggacgggataaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacatacaagttgtct 50186561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 50729505 - 50729595
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| | ||||||||    ||||||||  ||||||||||||| || ||||||||||  ||||||||||||||||    
T  50729505 acaaactggaggcaagggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtct 50729595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 2629907 - 2630004
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||| ||||| | ||||||||| |  ||||||||||||||| |||| | || ||||||||||  ||||||||||||||||    
T  2629907 gtacaggacaaactagaggcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttgtct 2630004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 7001939 - 7001885
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| |||||||||||| | ||| |||||||||    
T  7001939 tttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtct 7001885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 385
Target Start/End: Complemental strand, 11056172 - 11056083
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtaca 385  Q
    ||||| |||||||||||||||||||||| | ||||||||  |  |||||||||| |||||||||||||| |||||| ||| ||| |||||    
T  11056172 gtacaggacaaactggaggcaagggacaagacaaaaactgatatttttgtcccttaccaaaccacaacacaactttatgtcccatgtaca 11056083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 37695540 - 37695594
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||| |||||||    
T  37695540 tttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaggttgtct 37695594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 41711977 - 41711880
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||| |||||||||||| | |||| |||| |  ||||||||||||||||||||||  | ||||||||||  |||||||| |||||||    
T  41711977 gtacaggacaaactgaaggcaagggacaggacaaagactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacgtacaggttgtct 41711880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 53200608 - 53200697
Alignment:
Q  307 aaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataac-tttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||    
T  53200608 aaactggaggcaaggaacatgacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgtct 53200697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 393
Target Start/End: Complemental strand, 34930036 - 34929948
Alignment:
Q  307 aaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||| | ||||||||| |  |||||| ||||||||||||||| || |||||||||  |||  ||||||||||||    
T  34930036 aaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgccccatatacaagttgtct 34929948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 37932007 - 37931955
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    |||||||||||||||||||||||||| |||||||||| | || ||||||||||    
T  37932007 tttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgt 37931955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 23328006 - 23327951
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataac-tttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| |||||||||||| ||| ||||||| |||||||||||||||||    
T  23328006 tttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtct 23327951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 43739545 - 43739494
Alignment:
Q  342 ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||||||||||||    
T  43739545 ttgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtct 43739494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 50178448 - 50178546
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataac-tttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||    ||||||| ||||| ||||||||| || ||| ||||||| |||||||||||||||||    
T  50178448 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtct 50178546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 22318383 - 22318437
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| ||||||||||   ||||| |||||||||    
T  22318383 tttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtct 22318437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 29593025 - 29592928
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||| |||||||||| | |||||||||   ||||||| | |||| |||||||| || |||||||||| |||| || |||||||||    
T  29593025 gtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactttttgtcccacataaaagttgtct 29592928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 38520584 - 38520534
Alignment:
Q  341 tttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||||||||||||||||||| ||||| ||||||| ||||| |||||||||    
T  38520584 tttgtccctcaccaaaccacagcataattttttgtcccacgcacaagttgt 38520534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 39078748 - 39078694
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| || ||||||| | |||||| ||||||||    
T  39078748 tttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttgtct 39078694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 47361370 - 47361448
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaa-ctcgtttttgtccctcaccaaaccacaacataactttttgt 375  Q
    ||||| ||||||| |||||||||||||| | |||||  |   |||||||||||||||||||||||||| ||||||||||    
T  47361370 gtacaggacaaaccggaggcaagggacaagacaaaattcatatttttgtccctcaccaaaccacaacacaactttttgt 47361448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 25978569 - 25978664
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||| ||||||||| | ||| | ||||||||    ||||||||||||||||||||| | || ||||||||||  ||| ||||||||||||    
T  25978569 acatgacaaattggaggcaatgaacaggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagttgtct 25978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 42870101 - 42870007
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||| |||||| |||| | ||||||||| |  |||||||||||||||||||||| || |||   |||| ||||||| |||||||||    
T  42870101 gtacaggacaaactgggggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaac---ttgtcccacgtataagttgtct 42870007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 7554920 - 7555010
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| | ||||| |||| |  ||||||||||  |||||||| |||| |||||| |||| ||||||||||  ||||||||||||||||    
T  7554920 acaaactgaatgcaagagacatgataaaaactcgtatttttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtct 7555010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 6776774 - 6776728
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg 287  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  6776774 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttg 6776728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 9807285 - 9807189
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| || |||| ||||| | |||||||||   ||||||||| |||||||||||||  | |||||||||| | |||||||||||||||    
T  9807285 gtacaagacaaactagatgcaatggacaggacaaaaactcaactttttgtcc-tcaccaaaccacagtacaactttttgtcctacgtacaagttgtct 9807189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 29616295 - 29616203
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | |||||||||   |||||||||||      |||||| || |||||||||| |||||||||| ||||||    
T  29616295 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccct-----gaccacagcacaactttttgtcccacgtacaaattgtct 29616203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 511
Target Start/End: Original strand, 53200775 - 53200813
Alignment:
Q  473 gtgttgttatgccttatgttgtggtgttctgtcttgtac 511  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  53200775 gtgttgttatgccttatgttgtgatgttctgttttgtac 53200813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 6973875 - 6973946
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataacttttt 373  Q
    ||||||| ||||||||  |||| | ||||||||| |  ||||||||||| ||||||||||||| ||||||||    
T  6973875 gacaaacgggaggcaattgacaggacaaaaactcataattttgtccctcgccaaaccacaacacaacttttt 6973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 9e-28; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 29585069 - 29584906
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| ||||||||||||||||| |||| | |||    
T  29585069 taaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaa 29584970  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  29584969 aaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 29584906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 4851415 - 4851510
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||  ||||||||||||||| | ||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||    
T  4851415 gtacaagacaatttggaggcaagggacaggacaaaaactcatttttgtccctcaccaacccacaacacaactttttgtcccacgtacaagttgtct 4851510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 28675918 - 28675821
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||| | | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  28675918 gtacaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 28675821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 34026789 - 34026698
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  34026789 gacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtct 34026698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 51925165 - 51925260
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    |||||||||||||||||||||| ||||| | ||||||||  |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  51925165 gtacatgacaaactggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgt 51925260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 3864632 - 3864729
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||| ||||| | ||||||||| |  ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  3864632 gtacaagacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtct 3864729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 20609605 - 20609702
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||| ||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  20609605 gtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 20609702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 21374058 - 21373961
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||| ||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  21374058 gtacaggacaaacttgaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 21373961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 24571409 - 24571312
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| ||| |||||||||||||    
T  24571409 gtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtct 24571312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 25860378 - 25860475
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  25860378 gtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaagttgtct 25860475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 51259737 - 51259834
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||  || |||||||||| |||||||||||||||||    
T  51259737 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtct 51259834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 25927285 - 25927381
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||||||||||||||||||| | ||||||||| |  |||||||||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  25927285 tacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtct 25927381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 21221327 - 21221414
Alignment:
Q  308 aactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  21221327 aactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtct 21221414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 39052801 - 39052892
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||| ||||| | ||||||||| |  ||||||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  39052801 gacaaactggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 39052892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 42636366 - 42636457
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||   ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  42636366 gacaaactggaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 42636457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 49748868 - 49748963
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||||||||||||| ||||| | ||||||||  |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  49748868 gtacaggacaaactggaggcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgt 49748963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 1344598 - 1344761
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||||||||||||||||| | ||     
T  1344598 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaagggacaggacag 1344697  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  1344698 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtct 1344761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 40094697 - 40094534
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtg-----tttgtcaaac----tctagtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||     ||||| ||||    ||  |||||  ||||||||||||||||||||| | |||    
T  40094697 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagaacaaactggaggcaagggacaggacaa 40094598  T
Q  332 aaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||   ||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  40094597 aaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtct 40094534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 12349128 - 12349225
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||| |||||||||||||| || |||||| ||| |||||||||||||||||    
T  12349128 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttatgtcccacgtacaagttgtct 12349225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 44117067 - 44116970
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||| ||||||||  || |||||||||| |||||||||||||||||    
T  44117067 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactttttgtcccacgtacaagttgtct 44116970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 47958389 - 47958486
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||||||||||||||||| | ||||||||| |  |||||||||||||||||| ||| || |||||||||| |||||||||||||||||    
T  47958389 gtacaggaaaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtct 47958486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 19906883 - 19906793
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| | ||||||||    ||||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  19906883 acaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtct 19906793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 31882979 - 31883076
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||||| ||||||||  |  |||||| ||||| ||||||||| || |||||||||| |||||||||||||||||    
T  31882979 gtacaggacaaactggaggcaagagacacgacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcccacgtacaagttgtct 31883076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 51296709 - 51296612
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||| ||||| | ||||||||| |  ||||||||||||||||||||||||| || ||||||| | | |||||||||||||    
T  51296709 gtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttgtct 51296612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 53557752 - 53557849
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||| ||||| | ||||||||| |  |||||||||||||||||||||  || ||||||||||  ||||||||||||||||    
T  53557752 gtacaggacaaactggaggcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcacgtacaagttgtct 53557849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 386
Target Start/End: Complemental strand, 2135264 - 2135108
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||| |||||||||||||   |||    
T  2135264 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacagaacaa 2135165  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaa 386  Q
    |||||| |  |||||||||||||||||||||| || |||||||||| ||||||||||    
T  2135164 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaa 2135108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 38213476 - 38213385
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||| |||| | ||||||||| |  ||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||    
T  38213476 gacaatctggaggcaagagacaggacaaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtct 38213385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 20255172 - 20255076
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||| ||| | ||||||||| |  |||||||||||||||||||||| || ||||| |||| |||| ||||||||||||    
T  20255172 gtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaacttcttgtcccac-tacaagttgtct 20255076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 50678926 - 50678829
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||| | ||| | ||||||||  |  ||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||    
T  50678926 gtacaggacaaactggaggcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtct 50678829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 393
Target Start/End: Complemental strand, 3964414 - 3964319
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||| ||||||||||| ||  | ||||||||    ||||||||||||||||||||||| || |||||||||| ||| |||||||||||||    
T  3964414 acatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtct 3964319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 29646151 - 29646099
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||    
T  29646151 tttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgt 29646099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 33364735 - 33364832
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  ||||| |||||| ||||||||| || ||||||||||  ||||||||||||||||    
T  33364735 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtct 33364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 54622758 - 54622850
Alignment:
Q  303 tgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||  | |||||||||| | ||||||||| |  ||||||| ||||| ||||||||||| |||||||| | |||||||||||||||||    
T  54622758 tgacaaactaaatgcaagggacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttttatcccacgtacaagttgtct 54622850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 5442377 - 5442322
Alignment:
Q  338 gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||| |||| || |||||||||| ||||||||||| |||||    
T  5442377 gtttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagctgtct 5442322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 3867649 - 3867699
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    ||||||||||||||||||||||| || |||||||||| | |||||||||||    
T  3867649 tttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagtt 3867699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 50386413 - 50386510
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | |||||| |  |  |||||| ||||| ||||||||| || |||||||||| | |||||||||||||||    
T  50386413 gtacaggacaaactggaggcaagagacatgacaaaaattgatatttttgtgcctcaacaaaccacagcacaactttttgtcctacgtacaagttgtct 50386510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 3695264 - 3695303
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc 337  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  3695264 gtacatgacaaactggaggcaagggacaggacaaaaactc 3695303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 393
Target Start/End: Original strand, 34351371 - 34351422
Alignment:
Q  342 ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||| |||||||||||| ||||||||||  ||| ||||||||||||    
T  34351371 ttgtccctcatcaaaccacaacacaactttttgtcgcacatacaagttgtct 34351422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 44267824 - 44267773
Alignment:
Q  342 ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| |||||||||||||||||||||| | |||| ||||| ||||||    
T  44267824 ttgtccctcgccaaaccacaacataactttttatcccacatacaaattgtct 44267773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 393
Target Start/End: Original strand, 3695301 - 3695346
Alignment:
Q  348 ctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||| || ||| |||||| |||||||||||||||||    
T  3695301 ctcaccaaaccacatcacaaccttttgtcccacgtacaagttgtct 3695346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 41683010 - 41683078
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaaca 364  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  |||||||||||| ||||||||||||    
T  41683010 gtacaggacaaactggaggcaagagacaagacaaaaactgatacttttgtccctcagcaaaccacaaca 41683078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 52300558 - 52300468
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| ||| |||||||| | ||||||||    ||||||||| |||||||||||||||  || ||||||| ||| |||||||||||||    
T  52300558 gacaaactgcaggtaagggacaggacaaaaactgaaatttttgtccatcaccaaaccacaacgcaattttttgtccca-gtacaagttgtct 52300468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 45490912 - 45491010
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  45490912 agtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 45491010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 30105724 - 30105815
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  30105724 gacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtacaagttgtct 30105815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 51264631 - 51264536
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  51264631 gtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgt 51264536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 1351407 - 1351570
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||||||||||||| ||| | |||    
T  1351407 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaa 1351506  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1351507 aaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 1351570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 1601307 - 1601212
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||| |   ||||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  1601307 gtacaggacaaactggaggcaagggatagaacaaaaactcatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtct 1601212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 17888084 - 17887987
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  17888084 gtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtct 17887987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 31004268 - 31004171
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||| |||||| | ||||||||   ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  31004268 gtacaggacaaactggaggcacgggacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 31004171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 35387349 - 35387446
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||| |||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  35387349 gtacaggacaaactggaggtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtct 35387446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 32289382 - 32289477
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||| ||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  32289382 gtacaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgt 32289477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 844696 - 844859
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||| ||||||||||||| | |||    
T  844696 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaa 844795  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  844796 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 844859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 6711018 - 6711181
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     ||||| |||||||| ||||||||||||| | |||    
T  6711018 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaa 6711117  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  6711118 aaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtct 6711181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 12890428 - 12890277
Alignment:
Q  253 gataggtcagaacaactctagttgtccagtgtttg-----tcaaact----ctagtacatgacaaactggaggcaagggacacggcaaaaactcgt--tt 341  Q
    |||||| ||||||||||||||||||||||||||||     | |||||    || ||||| || ||||||||||||||||||| | ||||||||| |  ||    
T  12890428 gataggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggataaactggaggcaagggacaggacaaaaactcatattt 12890329  T
Q  342 ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||| ||||||||| || |||||||||| |||||||||||||||||    
T  12890328 ttgtccctcatcaaaccacagcacaactttttgtcccacgtacaagttgtct 12890277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 24339676 - 24339774
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcacc-aaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||| | |||||||||   ||||||||||||||| ||||||||||| |||||||| | |||||||||||||||||    
T  24339676 gtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaactttttttcccacgtacaagttgtct 24339774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 7184054 - 7183957
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||| |||||||||||||| |||||||||| | |||||||||||||||    
T  7184054 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttgtct 7183957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 16386990 - 16386893
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  16386990 gtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 16386893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 16451263 - 16451166
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||| ||||||||||||||||| |||||||||| |||| ||||||||||||    
T  16451263 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttgtct 16451166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 16437497 - 16437401
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||||| ||||||| ||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  16437497 tacaggacaaactagaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 16437401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 32270483 - 32270392
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| ||| |||||||||||||    
T  32270483 gacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtct 32270392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 6029346 - 6029436
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||| |||||||||||| | ||||||||    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  6029346 acaaactgaaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 6029436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 5109864 - 5109767
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||| ||||||||||||||| | |||||||||  |||||||||||||||||||||||| || |||||||||| | | |||||||||||||    
T  5109864 gtacaagacaaattggaggcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtccaaagtacaagttgtct 5109767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 28340341 - 28340438
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||| ||||||||| || ||||||||||  ||||||||||||||||    
T  28340341 gtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtct 28340438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 42510661 - 42510564
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||| ||||||||| | ||||||||| |  ||||||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  42510661 gtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 42510564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 44738080 - 44738177
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||  ||||||||||||||| | | ||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  44738080 gtacatgacaacttggaggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 44738177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 50540480 - 50540383
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | || |||||| |  |||||||| ||| |||||||||||| |||||||||| |||||||||||||||||    
T  50540480 gtacaggacaaactggaggcaagggacaggacataaactcatatttttgtccttcatcaaaccacaacacaactttttgtcccacgtacaagttgtct 50540383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 41973046 - 41972950
Alignment:
Q  299 tacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||| |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||  | ||||||||||  ||||||||||||||||    
T  41973046 tacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtct 41972950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 26118253 - 26118350
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||| ||||| | ||||||||| |  ||||||||||||||||| |||| || |||||||||| ||||||| |||||||||    
T  26118253 gtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttgtct 26118350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 26764833 - 26764930
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||||||||||| ||||| | ||||||||  |  |||||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  26764833 gtacaagataaactggaggcaaaggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtcccacgtacaagttgtct 26764930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 41967887 - 41967984
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| |||||||| |||| | ||||||||| |  |||||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  41967887 gtacaggacaaactagaggcaagagacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcacgtacaagttgtct 41967984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 6144026 - 6144121
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| | ||||||||    ||||||||||||  |||||||||||| |||||||| | ||||||| |||||||||    
T  6144026 acatgacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttgtct 6144121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 16476193 - 16476290
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| || |||||||||| |  |||||||| |  |||||||||||||||||||||  || |||||||||| |||||||||||||||||    
T  16476193 gtacaggacaaactagatgcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtct 16476290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 16704862 - 16704765
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaac--tcgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||||| |||||||     ||||||||||| ||||||||||| || |||| |||||  ||| ||||||||||||    
T  16704862 gtacatgacaaactggaggcaagggacacgacaaaaacatatatttttgtcccttaccaaaccacatcacaactctttgtctcacatacaagttgtct 16704765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 39282030 - 39281933
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| || |||||||||| | ||||||||| |  ||||||||||||||||||||||  | |||||||||| | |||||||||||||||    
T  39282030 gtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcctacgtacaagttgtct 39281933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 42705319 - 42705373
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  42705319 tttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtct 42705373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 50382484 - 50382538
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  50382484 tttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 50382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 391
Target Start/End: Complemental strand, 45658958 - 45658862
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    |||||| |||||||||||| ||| ||||| | ||||||||  |  ||||||| ||||||||||||||||| |||||||||| |||| ||||||||||    
T  45658958 agtacaggacaaactggagacaaaggacaagacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtcccacctacaagttgt 45658862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 13994115 - 13994210
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||| ||||||||||| ||  | ||||||||    |||||||||||||||||||||||||| ||||||||||  || |||||||||||||    
T  13994115 acatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttgtct 13994210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 25539948 - 25539896
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  25539948 tttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgt 25539896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 38663225 - 38663171
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| ||||||||| || |||||||||| |||||||||||||||||    
T  38663225 tttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtct 38663171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 42512808 - 42512905
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  |||||| ||||| |||||||||||| |||||||||| | |||||||| ||||||    
T  42512808 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtct 42512905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 17327687 - 17327766
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgt 375  Q
    ||||| |||||||||||| ||||||||| | ||||||||| |  ||||||||||||||||| |||| || ||||||||||    
T  17327687 gtacaggacaaactggagtcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgt 17327766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 11772713 - 11772765
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||||||||||||||||||||| || |||||||||| |||| ||||| ||||    
T  11772713 tttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgt 11772765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 49303398 - 49303489
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||| ||||||||| |  |||||||| |  |||||||| ||||||||||||| || || ||||| | | |||||||||||||||    
T  49303398 gacaaactggagacaagggacaagagaaaaactcatatttttgtccttcaccaaaccacagcacaattttttatcctacgtacaagttgtct 49303489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 38087033 - 38087131
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| || ||| |||| |||| ||||| | ||||||||| |  |||||||| |||| |||||||| || |||||||||| ||| |||||||||||||    
T  38087033 agtacaggataaaatggatgcaatggacatgacaaaaactcatatttttgtccttcactaaaccacatcacaactttttgtcccaagtacaagttgtct 38087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 39792897 - 39792846
Alignment:
Q  342 ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |||||||||||||||| ||||| ||||| ||||||||| ||||||    
T  39792897 ttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtct 39792846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 51703201 - 51703298
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| || |||||| ||||||||||||   |||||||||   ||||||| ||||||| |||||||||| |||||||||| |||| |||| |||||||    
T  51703201 agtacaggataaactgaaggcaagggacagaacaaaaactcatatttttgttcctcacc-aaccacaacacaactttttgtcccacctacatgttgtct 51703298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 3414897 - 3414986
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||| | ||||||| | ||||||||| |  |||||||||||||||||| ||| ||||| ||||| | |||||||| ||||||    
T  3414897 gacaatctggagacgagggacaggacaaaaactcatatttttgtccctcaccaaactacatcataattttttatcccacgtactagttgt 3414986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 32270555 - 32270509
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg 287  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  32270555 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttg 32270509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 15539860 - 15539908
Alignment:
Q  239 gttaaaaaataagggataggtcagaacaactctagttgtccagtgtttg 287  Q
    |||||||||| | ||| ||| ||||||||||| ||||||||||||||||    
T  15539860 gttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttg 15539908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 20494946 - 20495005
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaa 355  Q
    ||||| |||||||||||||||||||||| | |||||||||   ||||||||| |||||||    
T  20494946 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccatcaccaa 20495005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 18023 - 18120
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||| ||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  18023 gtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 18120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 12548 - 12602
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  12548 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 12602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 6e-26; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 393
Target Start/End: Complemental strand, 21785000 - 21784905
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||| |||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  21785000 acatgacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 21784905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 26994123 - 26994286
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||     | ||||| |     |||||||||||||||||||||||||||| | |||    
T  26994123 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaa 26994222  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    || ||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  26994223 aatctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 26994286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 1870266 - 1870169
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1870266 gtacaagataaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 1870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 10932521 - 10932618
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  10932521 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtct 10932618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 43158650 - 43158747
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  43158650 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcccacgtacaagttgtct 43158747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 47953321 - 47953224
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  47953321 gtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 47953224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 23349254 - 23349352
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||||   ||||||||    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  23349254 agtacatgacaaactggaggcaagggacagaacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtct 23349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 26371707 - 26371870
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttgtc-----aaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||||       ||||| |     ||||| |||||||||||||||||||||| | |||    
T  26371707 taaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgcaaaactatttcaggtacaggacaaactggaggcaagggacaggacaa 26371806  T
Q  332 aaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||| |  ||||||||||||||||| |||| || |||||||||| |||||||||||||||||    
T  26371807 aaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtct 26371870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 44748892 - 44748729
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgtttg-----tcaaactcta----gtacatgacaaactggaggcaagggacacggcaa 331  Q
    |||||||||| ||| ||| || |||||||||||||||||||||||||     | ||||| |     |||||||||||||| |||||||||||||   |||    
T  44748892 taaaaaataaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacagaacaa 44748793  T
Q  332 aaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||   |||||||||||||||||||||||| | |||||||||| |||||||||||||||||    
T  44748792 aaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttgtct 44748729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 11321849 - 11321946
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||| ||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  11321849 gtacaggacaaactggaggcaacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 11321946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 18386655 - 18386559
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||||| ||  |||||||   ||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  18386655 gtacatgacaaactggaggcaagggaca-ggacaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 18386559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 389
Target Start/End: Complemental strand, 29661454 - 29661361
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    |||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||| | |||||||||||||    
T  29661454 gtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaagtt 29661361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 36769533 - 36769630
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  36769533 gtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 36769630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 40753286 - 40753189
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||| |||| || |||||||||| |||||||||||||||||    
T  40753286 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtct 40753189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 41211164 - 41211261
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  41211164 gtacaagacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 41211261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 43189206 - 43189303
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||| |||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  43189206 gtacaggacaaactggaggtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtct 43189303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 3922667 - 3922760
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  |||||| ||||||||||||||| || |||||||||| |||||||||||||    
T  3922667 gtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagtt 3922760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 47316662 - 47316759
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| ||||||||||  ||| | ||||||||||    
T  47316662 gtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttgtct 47316759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 32873742 - 32873830
Alignment:
Q  307 aaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||| | ||||||||| |  |||||||| |||||||||||||||| ||||||||||  ||||||||||||||||    
T  32873742 aaactggaggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtct 32873830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 30222360 - 30222436
Alignment:
Q  102 gtttttcattgaattgtttccggtatagttaaaatctgagaattgatagatatgtttctttcttttattagaatatg 178  Q
    |||||||||||||||||||||  ||||||||| ||||||||||| ||| |  |||||||||||||||||||||||||    
T  30222360 gtttttcattgaattgtttcctttatagttaagatctgagaattcatataattgtttctttcttttattagaatatg 30222436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 30849210 - 30849305
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||||||| ||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| |||  ||||||||||    
T  30849210 gtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatatacaagttgt 30849305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 393
Target Start/End: Complemental strand, 34519637 - 34519542
Alignment:
Q  300 acatgacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| |||||||||||||||| | ||||||||    |||||||||||| ||||||||||||| |||||||||| ||| |||||||||||||    
T  34519637 acatgacaagctggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttgtct 34519542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 18470813 - 18470718
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||  ||| | ||||||||| |  ||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  18470813 gtacaggacaaactggaggcaag--acaggacaaaaactcatatttttgtctctcaccaaaccacagcataactttttgtcccacgtacaagttgtct 18470718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 329594 - 329507
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttg 390  Q
    ||||||||||||||| ||||| | ||||||||    ||||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  329594 acaaactggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 3891996 - 3892087
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| | ||||||||| |  ||||||| ||||||||| |||| || |||||||||| | |||||||||||||||    
T  3891996 gacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtct 3892087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 375
Target Start/End: Complemental strand, 11250748 - 11250669
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgt 375  Q
    ||||| |||||||||||||||||||||| | |||||| || |  ||||||||||||||||||||||||| ||||||||||    
T  11250748 gtacaggacaaactggaggcaagggacaggacaaaaaatcatatttttgtccctcaccaaaccacaacacaactttttgt 11250669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 16963269 - 16963174
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    |||||||||||||| ||||||||||| | | ||||||||| |  |||||||||| | |||||||||| | |||||||||| |||||||||||||||    
T  16963269 gtacatgacaaactagaggcaagggataggacaaaaactcatatttttgtcccttatcaaaccacaatacaactttttgtcccacgtacaagttgt 16963174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 22631826 - 22631772
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  22631826 tttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtct 22631772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 38301473 - 38301377
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| | ||||||||  |  |||||||||||| |||||||||||| |||||||||| ||||| |||||||||||    
T  38301473 gtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacg-acaagttgtct 38301377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 392
Target Start/End: Original strand, 26910382 - 26910470
Alignment:
Q  306 caaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtc 392  Q
    |||||||||||||||||||| |  |||||||    |||||||||||| ||||||||||||| ||||||||||  |||||||||||||||    
T  26910382 caaactggaggcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcacacgtacaagttgtc 26910470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 30598972 - 30599051
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgt 375  Q
    ||||| |||||||||||||||||||||| | ||||| ||| |  |||||||||||| |||||||||||| ||||||||||    
T  30598972 gtacaggacaaactggaggcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaacacaactttttgt 30599051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 382
Target Start/End: Complemental strand, 11822354 - 11822268
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgt 382  Q
    ||||| ||||||||||| |||||||||| | ||||||||| |  |||||||| |||| ||||||||||| |||||||||| ||||||    
T  11822354 gtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtcccacgt 11822268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 48699483 - 48699432
Alignment:
Q  342 ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  48699483 ttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtct 48699432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 26652954 - 26652900
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| ||||||||| || |||||||||| |||||||||||||||||    
T  26652954 tttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtct 26652900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 34117540 - 34117486
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || || ||||||||||| |||||||||||||    
T  34117540 tttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtct 34117486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 34295411 - 34295465
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||| ||||||||| || |||||||||| |||||||||||||||||    
T  34295411 tttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtct 34295465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 43213888 - 43213985
Alignment:
Q  297 agtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtc 392  Q
    |||||| ||||||||| |||||||||||| |  |||| ||  |  |||||||| |||||||||||||||| |||||||||| |||| |||||||||||    
T  43213888 agtacaggacaaactgaaggcaagggacaagataaaagctgatatttttgtccttcaccaaaccacaacacaactttttgtcccacatacaagttgtc 43213985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 46633785 - 46633731
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| || |||||||||| |||||||||||||||||    
T  46633785 tttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 46633731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 392
Target Start/End: Complemental strand, 1363767 - 1363671
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtc 392  Q
    ||||| |||||||||||||||||||||| | ||||| ||    ||||||||||||| ||||||||| || ||||||||||  |||||||| ||||||    
T  1363767 gtacaggacaaactggaggcaagggacatgacaaaagctgatatttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgtc 1363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 20127420 - 20127325
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaact--cgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    ||||| |||||||||||||||||||||| | ||||| ||    ||||||| ||||| ||||||||| || |||||||||| |||||||||| ||||    
T  20127420 gtacaggacaaactggaggcaagggacaggacaaaagctgatatttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgt 20127325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 22724501 - 22724592
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||| | | ||||| ||    ||||||||||||||||||||||| |  |||||| ||| |||||||||||||||||    
T  22724501 gacaaactggaggcaagggatatgacaaaagctgcaatttttgtccctcaccaaaccacagcgcaactttatgtcccacgtacaagttgtct 22724592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 30222250 - 30222324
Alignment:
Q  13 gactgaatcacaataaatctcggtgtcatcttagttacc---catctctatttaaatttcaacaatttagtttca 84  Q
    ||||||| || |||||||||||||||||||||| |||||   | ||||| |||||||||||||||||||| ||||    
T  30222250 gactgaaccagaataaatctcggtgtcatcttacttacccttcttctctctttaaatttcaacaatttagattca 30222324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 29372786 - 29372840
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| |||| ||||||||||| |||||| ||||||| |||||||||||||    
T  29372786 tttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtct 29372840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 389
Target Start/End: Complemental strand, 37967105 - 37967012
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    |||||||||||| |||| |||||||||| | ||||||| | |  |||||||  |||| | |||||| || ||||||||||||||||||||||||    
T  37967105 gtacatgacaaattggatgcaagggacaagacaaaaacccatatttttgtctttcactagaccacatcacaactttttgttccacgtacaagtt 37967012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 41665582 - 41665636
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||    
T  41665582 tttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtct 41665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 46408977 - 46408923
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||||||| || |||||||||| | || ||||||||||||    
T  46408977 tttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgtct 46408923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 9913655 - 9913559
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt-ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||| ||||||||||||| | |||||| |  | ||||||| |||||||||||||| || |||||||| | ||||||||| |||||||    
T  9913655 gtacaggataaactagaggcaagggacaggacaaaaattgatattttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtct 9913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 9927343 - 9927247
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt-ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| || ||||| ||||||||||||| | |||||| |  | ||||||| |||||||||||||| || |||||||| | ||||||||| |||||||    
T  9927343 gtacaggataaactagaggcaagggacaggacaaaaattgatattttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtct 9927247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 43368326 - 43368235
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||| |||  | ||||||||  |  |||||| ||||| ||||||||| || |||||||||| | |||||||||||||||    
T  43368326 gacaaactggaggcaagagacgggacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcctacgtacaagttgtct 43368235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 41665496 - 41665541
Alignment:
Q  241 taaaaaataagggataggtcagaacaactctagttgtccagtgttt 286  Q
    |||| ||||| ||||||| ||||||||||| |||||||||||||||    
T  41665496 taaataataaaggataggacagaacaactccagttgtccagtgttt 41665541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 16963337 - 16963289
Alignment:
Q  239 gttaaaaaataagggataggtcagaacaactctagttgtccagtgtttg 287  Q
    |||||||||| | ||| ||| ||||||||||||| ||||||||||||||    
T  16963337 gttaaaaaatgaaggacaggacagaacaactctaattgtccagtgtttg 16963289  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 17237200 - 17237117
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaa 386  Q
    |||||||||| |||||| ||| | ||||||||| |  |||||||  |||| ||||||||||| ||||||||||  |||||||||    
T  17237200 acaaactggatgcaaggaacatgacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaa 17237117  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 21408635 - 21408683
Alignment:
Q  341 tttgtccctcaccaaaccacaacataactttttgttccacgtacaagtt 389  Q
    |||||||||||  |||||||||||||||||||| || || |||||||||    
T  21408635 tttgtccctcattaaaccacaacataactttttatttcatgtacaagtt 21408683  T

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Target: scaffold0650 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 1618 - 1709
Alignment:
Q  304 gacaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||| | ||||||||    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1618 gacaaactggaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtct 1709  T

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Target: scaffold0208 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 2307 - 2404
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||| ||||||||||||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  2307 gtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 2404  T

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Target: scaffold0027 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 15299 - 15202
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||||||||||||||||| | ||||||||| |  ||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||    
T  15299 gtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaactttttgtctcacgtacaagttgtct 15202  T

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Target: scaffold0729 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 4555 - 4645
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||| | ||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  4555 acaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtct 4645  T

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Target: scaffold0054 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 23702 - 23605
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||||| ||||||||||||| | ||||||||| |  |||||||| ||||||||||||| || |||||||||| |||||||||||||||||    
T  23702 gtacaggacaaacttgaggcaagggacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtct 23605  T

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Target: scaffold0014 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 102076 - 101979
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||  ||||||||| ||||| | ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  102076 gtacaggacaacttggaggcaacggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 101979  T

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Target: scaffold0004 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 372942 - 373030
Alignment:
Q  307 aaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||| ||||||| | | ||||||||| |  |||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  372942 aaactggagacaagggatatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtcccacgtacaagttgtct 373030  T

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Target: scaffold0098 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 51558 - 51469
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcgt--ttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||| |||||||||| | ||||||||| |  ||||||||||||| |||||||| || |||||||||| |||||||||||||||||    
T  51558 acaaactggatgcaagggacaagacaaaaactcatatttttgtccctcac-aaaccacagcacaactttttgtcccacgtacaagttgtct 51469  T

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Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 15393 - 15447
Alignment:
Q  339 tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  15393 tttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtct 15447  T

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Target: scaffold0181 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 19060 - 19156
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactc--gtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| ||||||||||||||||| |||| ||  |||||||   |||||||||||||||||| |||| || |||||||||| |||||||||||||||||    
T  19060 gtacaggacaaactggaggcaagagaca-ggacaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtct 19156  T

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Target: scaffold0025 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 5408 - 5503
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaa---ctcgtttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttg 390  Q
    ||||| |||||||||||||||||||||| | ||||||   |   ||||||||||||||||||||||| || |||||||||| |||| |||||||||    
T  5408 gtacaagacaaactggaggcaagggacaggacaaaaaacacatatttttgtccctcaccaaaccacatcacaactttttgtcccacatacaagttg 5503  T

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Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 386
Target Start/End: Original strand, 42926 - 43009
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaa 386  Q
    |||||||||||||||||||||   ||||||||    ||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  42926 acaaactggaggcaagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtacaa 43009  T

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Target: scaffold0280 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 13663 - 13753
Alignment:
Q  305 acaaactggaggcaagggacacggcaaaaactcg--tttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||||||||||||||||| | | ||||||||    |||||||||||||||||||||||  | |||||||||| |||| ||||||||||||    
T  13663 acaaactggaggcaagggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtct 13753  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 33559 - 33608
Alignment:
Q  342 ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgt 391  Q
    |||||||||| |||||||||||| |||||||||| |||||||||| ||||    
T  33559 ttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgt 33608  T

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Target: scaffold0957 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 2465 - 2561
Alignment:
Q  298 gtacatgacaaactggaggcaagggacacggcaaaaactcgttt--ttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtct 393  Q
    ||||| |||||| |||||| |||||||| | ||||||||| | |  |||||||| |||||||||||||| ||| | ||||  ||||||||||||||||    
T  2465 gtacaagacaaattggaggaaagggacaggacaaaaactcatatctttgtccctaaccaaaccacaacacaac-tattgtctcacgtacaagttgtct 2561  T

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