View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4494-Insertion-9 (Length: 428)
Name: NF4494-Insertion-9
Description: NF4494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4494-Insertion-9 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 8 - 428
Target Start/End: Complemental strand, 14974121 - 14973701
Alignment:
| Q |
8 |
tgtagcgcattctccaataggctctctacaaaggaccctacaatggaaaaatccttagccaaaagcctcaaaactacatgtccaaatgcaagatcaaaaa |
107 |
Q |
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| T |
14974121 |
tgtagcacattctccaagaggctctcttcaaaggaccctacaatggaaaaatccttagccaaaagcctcaaaactagatgtccaaatgcaagctcagaca |
14974022 |
T |
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| Q |
108 |
atacagcaaacttggatttgagaacaccaacattgtttgataacaaatactaccttgaattaatgaatagtcgtggtttgttcacttctgaccaagactt |
207 |
Q |
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| T |
14974021 |
atacagcaaacttggatttgagaacaccaacattttttgataacaaatactaccttgaattaatgaatagtcgtggtttgttcacttctgaccaagactt |
14973922 |
T |
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| Q |
208 |
gttcaatgataagagaacaaagggattagtcacttcatttgccaataatcagaagctgttttttgagaagttttccgttgctattactaagatgagtcaa |
307 |
Q |
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| T |
14973921 |
gttcaatgataagagaacaaagggattagtcacttcatttgccaataatcagaagctgttttttgagaagttttccgttgctattactaagatgagtcaa |
14973822 |
T |
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| Q |
308 |
ttgagtgtgttgacgggtaatcaaggtgaaattcgtgctaagtgcaatgtttcaaacacgaagtaagccatctagataaagcttatttgtgtaccgtcaa |
407 |
Q |
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| T |
14973821 |
ttgagtgtgttgacgggtaatcaaggtgaaattcgcgctaagtgcaatgttgtaaacacaaagtaagccatcttgataaagcttatttgtgtaccgtcaa |
14973722 |
T |
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| Q |
408 |
taagagctagctcaattttcg |
428 |
Q |
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| T |
14973721 |
taagagctagctcaattttcg |
14973701 |
T |
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