View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4496-Insertion-12 (Length: 324)
Name: NF4496-Insertion-12
Description: NF4496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4496-Insertion-12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 8 - 324
Target Start/End: Original strand, 5524880 - 5525196
Alignment:
| Q |
8 |
aatctaatttagtactctctcatttccattcatacatatattnnnnnnntgacaaacaataccaccatccaccctcaagccaaaaccaccaccaacggcg |
107 |
Q |
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| T |
5524880 |
aatctaatttagtactctctcatttccattcatacatatattaaaaaaatgacaaacaataccaccatccaccctcaagccaaaaccaccaccaacggtg |
5524979 |
T |
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| Q |
108 |
gtgcagccaccgccgttaaaccctcattcccggcgacaaaagcgcaaatctacggtgcaacccggccaacctaccgtccacaaacccaccgttaccgtaa |
207 |
Q |
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| T |
5524980 |
gtgcagccaccgccgttaaaccctcattcccggcgacaaaagcgcaaatctacggcgccacccgcccaacctaccgtccacaaacccaccgtcaccgtaa |
5525079 |
T |
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| Q |
208 |
caaccgtaactggtgttgcaccatttgttgctggcttcttctcatcctcatcttcatcctcatcctcctcggcgtcgctggcaccgtcgtctacttcctc |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5525080 |
caaccgtaactggtgttgcaccatttgttgctggcttcttctcatcctcatcttcgtcctcatcctcctcggcgtcgctggcaccgtcgtctacttcctc |
5525179 |
T |
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| Q |
308 |
taccatccccaacgtcc |
324 |
Q |
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||||||||||||||||| |
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| T |
5525180 |
taccatccccaacgtcc |
5525196 |
T |
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