View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4497-Insertion-12 (Length: 457)
Name: NF4497-Insertion-12
Description: NF4497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4497-Insertion-12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 8 - 457
Target Start/End: Complemental strand, 7081186 - 7080737
Alignment:
| Q |
8 |
gaggaaggttgttcagattttccgaccagggacaatgtcggtgtcaataacgacatgtagtgagtataacaatgaggtttggagaaaggttactggtgca |
107 |
Q |
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| T |
7081186 |
gaggaaggttgttcagattttccgaccagggacaatgtcggtgtcgataacgacatgtagtgagtataacaatgaggtttggagaaaggttactggtgca |
7081087 |
T |
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| Q |
108 |
ttggagcctcttgggttgaaatgtaggagttgtgctatggatcagtttcctgcaataggtagtgttgtgtttcaaacgtttagcccaagtcgtcggaaaa |
207 |
Q |
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| T |
7081086 |
ttggagcctcttgggttgaaatgtaggagttgtgctatggatcagtttcctgcaataggtagtgttgtgtttcaaacgtttaccccacgtcgtcggaaaa |
7080987 |
T |
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| Q |
208 |
atgcttcaaagtagtcaatgcatgaaaatctcgatcatctgattttgatcgagatttacaacgtatctttttatttatcgagctttaaatttggaccgtc |
307 |
Q |
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| T |
7080986 |
atgcttcaaagtagtcaatgcatgaaaatctcgatcatctgattttgatcaagatttacaacgtatctttttatttatcaagctttaaatttggaccgtc |
7080887 |
T |
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| Q |
308 |
ttgatttgtataactgcaagattctccgatgttagggaatcaaggtcaaaaatttgagagcataagctaacaagagtgacttggaatttagttgaaatgt |
407 |
Q |
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| T |
7080886 |
ttgatttgtataagtgcaagattctccgatgttagggaatcaatgtcaaaaatttgagagcataagctaacaagagtgacttagaatttagttgaaatat |
7080787 |
T |
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| Q |
408 |
ttcaggggtggtgacatagcacaatgtggttggttcctatgtatgatgaa |
457 |
Q |
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| T |
7080786 |
ttcaggggtggtgacatagcacaatgtggttggttcctatgtatgatgaa |
7080737 |
T |
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