View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4497-Insertion-3 (Length: 1058)

Name: NF4497-Insertion-3
Description: NF4497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4497-Insertion-3
NF4497-Insertion-3
[»] chr3 (19 HSPs)
chr3 (8-1001)||(4566969-4567959)
chr3 (648-720)||(45487868-45487940)
chr3 (648-720)||(25446319-25446391)
chr3 (648-720)||(26906523-26906595)
chr3 (648-720)||(36278786-36278858)
chr3 (648-720)||(50099503-50099575)
chr3 (484-522)||(2180580-2180618)
chr3 (650-746)||(43150522-43150619)
chr3 (648-720)||(3970521-3970593)
chr3 (648-720)||(4072303-4072375)
chr3 (648-720)||(8831810-8831882)
chr3 (648-720)||(10254638-10254710)
chr3 (648-720)||(13078193-13078265)
chr3 (648-720)||(21969187-21969259)
chr3 (648-720)||(21991623-21991695)
chr3 (648-720)||(22101234-22101306)
chr3 (648-720)||(36657463-36657535)
chr3 (649-720)||(12838146-12838217)
chr3 (648-746)||(26977732-26977831)
[»] chr6 (9 HSPs)
chr6 (648-720)||(21379971-21380043)
chr6 (649-720)||(4890511-4890582)
chr6 (649-720)||(13439765-13439836)
chr6 (648-743)||(3369030-3369126)
chr6 (648-720)||(11687173-11687245)
chr6 (648-720)||(14393633-14393705)
chr6 (648-720)||(15546701-15546773)
chr6 (637-720)||(8091131-8091214)
chr6 (444-522)||(35168568-35168647)
[»] scaffold0188 (1 HSPs)
scaffold0188 (648-720)||(7155-7227)
[»] chr7 (11 HSPs)
chr7 (648-720)||(34052348-34052420)
chr7 (648-720)||(24836089-24836161)
chr7 (648-720)||(30594762-30594834)
chr7 (648-720)||(35339308-35339380)
chr7 (649-722)||(33749711-33749784)
chr7 (648-720)||(20184268-20184340)
chr7 (648-720)||(37093837-37093909)
chr7 (648-720)||(38883290-38883362)
chr7 (648-720)||(40358184-40358256)
chr7 (648-719)||(31231644-31231715)
chr7 (651-720)||(39617874-39617943)
[»] chr4 (11 HSPs)
chr4 (648-720)||(24969571-24969643)
chr4 (648-743)||(21048735-21048830)
chr4 (648-720)||(20435170-20435242)
chr4 (648-720)||(27434679-27434751)
chr4 (648-720)||(42274522-42274594)
chr4 (649-743)||(35360721-35360816)
chr4 (654-720)||(4552854-4552920)
chr4 (649-743)||(4895017-4895113)
chr4 (648-720)||(24915824-24915896)
chr4 (648-720)||(32318750-32318822)
chr4 (649-720)||(24294536-24294607)
[»] chr8 (7 HSPs)
chr8 (648-743)||(24741853-24741949)
chr8 (648-720)||(40891082-40891154)
chr8 (649-720)||(38629543-38629614)
chr8 (649-722)||(11828627-11828700)
chr8 (648-720)||(17426658-17426730)
chr8 (648-720)||(38520087-38520159)
chr8 (648-746)||(23940834-23940934)
[»] chr5 (9 HSPs)
chr5 (648-720)||(20476500-20476572)
chr5 (643-743)||(37655177-37655277)
chr5 (648-720)||(1138628-1138700)
chr5 (648-720)||(15855912-15855984)
chr5 (648-720)||(16473024-16473096)
chr5 (648-720)||(21259760-21259832)
chr5 (648-720)||(21262012-21262084)
chr5 (648-720)||(35420642-35420714)
chr5 (649-746)||(12744868-12744966)
[»] chr1 (14 HSPs)
chr1 (648-720)||(2854562-2854634)
chr1 (648-720)||(3607759-3607831)
chr1 (648-720)||(6079453-6079525)
chr1 (648-720)||(23698532-23698604)
chr1 (648-720)||(5189538-5189610)
chr1 (648-720)||(15324696-15324768)
chr1 (648-720)||(19954941-19955013)
chr1 (648-720)||(27240954-27241026)
chr1 (648-720)||(47940600-47940672)
chr1 (648-743)||(48645044-48645140)
chr1 (648-720)||(48954244-48954316)
chr1 (648-720)||(50627200-50627272)
chr1 (648-719)||(51276725-51276796)
chr1 (650-720)||(14387047-14387117)
[»] scaffold0718 (1 HSPs)
scaffold0718 (444-546)||(1106-1200)
[»] chr2 (11 HSPs)
chr2 (649-720)||(43476015-43476086)
chr2 (648-720)||(1924010-1924082)
chr2 (648-720)||(3116945-3117017)
chr2 (648-720)||(9281377-9281449)
chr2 (648-747)||(22269763-22269863)
chr2 (648-720)||(24101862-24101934)
chr2 (648-720)||(27920641-27920713)
chr2 (648-720)||(45408694-45408766)
chr2 (649-720)||(2818735-2818806)
chr2 (648-743)||(9850788-9850883)
chr2 (648-748)||(6605775-6605875)
[»] scaffold0163 (1 HSPs)
scaffold0163 (648-722)||(1969-2043)


Alignment Details
Target: chr3 (Bit Score: 858; Significance: 0; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 858; E-Value: 0
Query Start/End: Original strand, 8 - 1001
Target Start/End: Complemental strand, 4567959 - 4566969
Alignment:
Q  8 tgtgttgtgtaaaattccttaaagatattctaatgttgaaagtcatgtcatttgatgaagaattgttttctacaaccaagaattgtcgtgtgatttttaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| || ||||||||||||    
T  4567959 tgtgttgtgtaaaattccttaaagatattctaatgttgaaagtcatgtcatttgatgaagaattgttttctataac--agaattttcatgtgatttttaa 4567862  T
Q  108 aaggaaacctcccctaaaagttagaggttcctggttgcttcaatattatagtttacattggtggtgtttaaatagatagagcaaatgtgacttaggatcc 207  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4567861 aaggaaacctcccctaaat-ttagaggttcctggttgcttcaatattatagtttacattggtgatgtttaaatagatagagcaaatgtgacttaggatcc 4567763  T
Q  208 agtttcaacctgataacattatctacgttcaataaaatcggatttgtgaagttacaaccatgtgaggcgaaagtcgatcttgcatattgttcatgaagaa 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4567762 agtttcaacctgataacattatctacgttcaataaaatcggatttgtgaagttacaaccatgtgaggcgaaagtcgatcttgcatattgttcatgaacaa 4567663  T
Q  308 atgtagaaggaatagaggaaaatgtactagtaagggttgacaaattcatcttttcaacatacattatggtaatggaggtgatcgattttaaagtattggc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4567662 atgtagaaggaatagaggaaaatgtactagtaagggttgacaaattcatctttccaacatacattatggtaatggaggtgatcgattttaaagtattggc 4567563  T
Q  408 gctttttgaggaatatactcatcataatcatcatcattttctctatagaataactggtgaaaatttgatccacatattttcactttttactataattctt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4567562 gctttttgaggaatatactcatcataatcatcatcattttctctatagaataactggtgaaaatttgatccacatattttcactttttactataattctt 4567463  T
Q  508 tcatcatatgtgaatgtgagtatccatgtttgaatgttactttcctgaagcttgaagggtaaaatagaaaagaaaaaagtcaacctaaacttttaaattc 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4567462 tcatcatatgtgaatgtgagtatccatgtttgaatgttactttcctgaagcttgaagggtaaaatagaaaagaaaaaagtcaacctaaacttttaaattc 4567363  T
Q  608 tcttgtatatagtagagatttatattttcttgcttcggttcttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaa 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4567362 tcttgtatatagtagagatttatattttcttgcttcggttcttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaa 4567263  T
Q  708 tgtttgttatatctagaaaggtgtatttttagttaaaaataatcatagaaaacatctaaaaaatgcatctaagannnnnnnnnnnnnnnnnacaattata 807  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||    
T  4567262 tgtttgttatatctaaaaaggtgtatttttagttaaaaataatcatagaaaacatctaaaaaatgcatctaagattttttattttatttttacaattata 4567163  T
Q  808 gttgccggtataaattttcatcggagtccttttttgttgacagatttcatccgagtacttgcaaccacaagtatgaacttctataatttatgttttaaag 907  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4567162 gttgccggtgtaaattttcatcggagtccttttttgttgacagatttcatccgagtacttgcaaccacaagtatgaacttctataatttatgttttaaag 4567063  T
Q  908 atattgctcatgttaag-tataaaaaattagaatacccaaatttgggaggtctaattaaatgatataaagaaattaaaaaattgca-gccttccat 1001  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4567062 atattgctcatgttaagttataaaaaattag-atacccaaattt-ggaggtctaattaaatgatataaagaaattaaaaaattgcaggccttccat 4566969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 45487940 - 45487868
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||||||||||||  ||||||||||||||||||||||    
T  45487940 cttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttatatc 45487868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 25446391 - 25446319
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  25446391 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 25446319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 26906595 - 26906523
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |  | | |||||||||||||||  ||||||||| ||||||||||||    
T  26906595 cttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatc 26906523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 36278786 - 36278858
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |  | | |||||||||||||||  ||||||||| ||||||||||||    
T  36278786 cttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatc 36278858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 50099575 - 50099503
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | ||   |||||||||||||||  ||||||||| ||||||||||||    
T  50099575 cttttcgtatggttcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgttatatc 50099503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 484 - 522
Target Start/End: Complemental strand, 2180618 - 2180580
Alignment:
Q  484 ttttcactttttactataattctttcatcatatgtgaat 522  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  2180618 ttttcactttttactataattctttcatcatgtgtgaat 2180580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 43150619 - 43150522
Alignment:
Q  650 tttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatat-ctagaaaggtgtatttttagttaaaaa 746  Q
    ||||||||| |||||| ||||||| |  | | |||||||||||||||  ||||||||| ||||||||||| | | |||  ||||||||||||||||||    
T  43150619 tttcgtatgattcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaa 43150522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 3970521 - 3970593
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||| |||| |||  ||||||||| ||||||||||||    
T  3970521 cttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatc 3970593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 4072303 - 4072375
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||| ||| |||  ||||||||| ||||||||||||    
T  4072303 cttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatc 4072375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 8831882 - 8831810
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||| |||||| |||  ||||||||| ||||||||||||    
T  8831882 cttttcgtatggttcttaactaaattcaccatgatttcttcaaatccataattttctcaaagtttgttatatc 8831810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 10254710 - 10254638
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |||| | ||| ||||||| |||  |||| |||| ||||||||||||    
T  10254710 cttttcgtatggttcttaactaaattcatcatgattttctcaaatccataattttttcaaagtttgttatatc 10254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 13078193 - 13078265
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||| |||| |||  ||||||||| ||||||||||||    
T  13078193 cttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatc 13078265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 21969187 - 21969259
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||| |||| |||  ||||||||| ||||||||||||    
T  21969187 cttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatc 21969259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 21991623 - 21991695
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||| |||| |||  ||||||||| ||||||||||||    
T  21991623 cttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatc 21991695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 22101306 - 22101234
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |  | | ||||||||||| |||  ||||||||| ||||||||||||    
T  22101306 cttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatc 22101234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 36657463 - 36657535
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  36657463 cttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 36657535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 720
Target Start/End: Complemental strand, 12838217 - 12838146
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||| ||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  12838217 ttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 12838146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 746
Target Start/End: Complemental strand, 26977831 - 26977732
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc-tagaaaggtgtatttttagttaaaaa 746  Q
    |||||| ||||||||||| ||||||| |  | | ||||||||||| |||  ||||||||| |||| || |||| || |||| ||||||||||||||||||    
T  26977831 cttttcatatggttcttaactaaatttagtatgatttcctcaaatccataattttctcaaagtttattgtatcataaaaagatgtatttttagttaaaaa 26977732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 4e-16; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 21379971 - 21380043
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||||||||||||  ||||||||||||||||||||||    
T  21379971 cttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttatatc 21380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 649 - 720
Target Start/End: Original strand, 4890511 - 4890582
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||| ||||||| | || | |||||||||||||||  ||||||||| ||||||||||||    
T  4890511 ttttcgtatggttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatatc 4890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 649 - 720
Target Start/End: Complemental strand, 13439836 - 13439765
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  13439836 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 13439765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 743
Target Start/End: Complemental strand, 3369126 - 3369030
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttata-tctagaaaggtgtatttttagttaa 743  Q
    |||||||||| |||| || ||||||| | || | |||||||||||||||  ||||||||| |||||||||| || | |||  |||||||||||||||    
T  3369126 cttttcgtatcgttcctaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaa 3369030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 11687173 - 11687245
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  11687173 cttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 11687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 14393705 - 14393633
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||| |||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  14393705 ctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 14393633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 15546773 - 15546701
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||||  |||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  15546773 cttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatc 15546701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 720
Target Start/End: Complemental strand, 8091214 - 8091131
Alignment:
Q  637 ttgcttcggttcttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||| ||| |||||||||||||||||| ||||||| | |  | |||||| |||| |||  ||||||||| ||||||||||||    
T  8091214 ttgcttaggtgcttttcgtatggttcttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttatatc 8091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 522
Target Start/End: Complemental strand, 35168647 - 35168568
Alignment:
Q  444 ttttctctatagaataactggtgaaaatttgatccacatattttc-actttttactataattctttcatcatatgtgaat 522  Q
    |||||||||||| ||||   |||| ||||||| |||  ||||||| ||||||||||||||||||||||| || |||||||    
T  35168647 ttttctctatagcataatcagtgagaatttgagccaattattttccactttttactataattctttcattatgtgtgaat 35168568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 7227 - 7155
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  7227 cttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatc 7155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 34052420 - 34052348
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||||||||||||  ||||||||| ||||||||||||    
T  34052420 cttttcgtatggttcttagctaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatc 34052348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 24836161 - 24836089
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  24836161 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 24836089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 30594834 - 30594762
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  30594834 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 30594762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 35339308 - 35339380
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |||| | |||| |||||| |||  ||||||||| ||||||||||||    
T  35339308 cttttcgtatggttcttaactaaattcatcatgatttcttcaaatccataattttctcaaagtttgttatatc 35339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 649 - 722
Target Start/End: Complemental strand, 33749784 - 33749711
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatcta 722  Q
    |||| |||||||||||| ||||||| |||| | |||||| ||||||||  ||||||||| |||| |||||||||    
T  33749784 tttttgtatggttcttaactaaattcatcatgatttccttaaattcataattttctcaaagtttattatatcta 33749711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 20184268 - 20184340
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||| |||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  20184268 cttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 20184340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 37093909 - 37093837
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||| ||| ||||||| | || | |||||||||||| ||  ||||||||| ||||||||||||    
T  37093909 cttttcgtatggtttttaactaaattcaccatgatttcctcaaatttataattttctcaaagtttgttatatc 37093837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 38883362 - 38883290
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  38883362 cttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 38883290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 40358256 - 40358184
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||| |||| |||||| ||||||| | || | |||||||||||||||  ||||||||| ||||||||||||    
T  40358256 cttttcctatgattcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatc 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 719
Target Start/End: Original strand, 31231644 - 31231715
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatat 719  Q
    ||||| |||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| |||||||||||    
T  31231644 ctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 31231715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 651 - 720
Target Start/End: Original strand, 39617874 - 39617943
Alignment:
Q  651 ttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||| ||||||| | || | ||||||| ||| |||  ||||||||| ||||||||||||    
T  39617874 ttcgtatggttcttaactaaattcaccatgatttcctccaatccataattttctcaaagtttgttatatc 39617943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 24969571 - 24969643
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||||||||||||  ||||||||| ||||||||||||    
T  24969571 cttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatc 24969643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 648 - 743
Target Start/End: Original strand, 21048735 - 21048830
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatctagaaaggtgtatttttagttaa 743  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||| | |||||||||||| | |||  |||||||||||||||    
T  21048735 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcgaagtttgttatatcaaaaaatatgtatttttagttaa 21048830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 20435170 - 20435242
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |||| | ||||||||||| |||  ||||||| | ||||||||||||    
T  20435170 cttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcgaagtttgttatatc 20435242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 27434751 - 27434679
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | ||   |||||||||||||||  ||||||||| ||||||||||||    
T  27434751 cttttcgtatggttcttaactaaatttaccataatttcctcaaattcataattttctcaaagtttgttatatc 27434679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 42274522 - 42274594
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  42274522 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 42274594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 649 - 743
Target Start/End: Complemental strand, 35360816 - 35360721
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatct-agaaaggtgtatttttagttaa 743  Q
    ||||||||||||||||| ||||||| | || | |||||| |||| |||  ||||||||| ||||||||||||| | |||  |||||||||||||||    
T  35360816 ttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaa 35360721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 654 - 720
Target Start/End: Complemental strand, 4552920 - 4552854
Alignment:
Q  654 gtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||| ||||||| |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  4552920 gtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatc 4552854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 649 - 743
Target Start/End: Complemental strand, 4895113 - 4895017
Alignment:
Q  649 ttttcgtatggtt-cttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttata-tctagaaaggtgtatttttagttaa 743  Q
    ||||||||||||| |||| ||||||| | || | |||||||||||||||  ||||||||| |||||||||| || | |||  |||||||||||||||    
T  4895113 ttttcgtatggtttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaa 4895017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 24915824 - 24915896
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||| ||||||| |||  ||||||||| ||||||||||||    
T  24915824 cttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatc 24915896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 32318750 - 32318822
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||||| || |||  ||||||||| ||||||||||||    
T  32318750 cttttcgtatggttcttaactaaattcaccatgatttcctcagatccataattttctcaaagtttgttatatc 32318822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 720
Target Start/End: Complemental strand, 24294607 - 24294536
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||| ||||||| | ||   ||||||||||||| |  ||||||||| ||||||||||||    
T  24294607 ttttcgtatggttcttaactaaattcaccataatttcctcaaattcgtaattttctcaaagtttgttatatc 24294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000003; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 743
Target Start/End: Original strand, 24741853 - 24741949
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatat-ctagaaaggtgtatttttagttaa 743  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||| ||||||||  |||| |||||| | | | ||||||||||||||||||    
T  24741853 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatgattttctcagagtttattatatgcaacataggtgtatttttagttaa 24741949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 40891154 - 40891082
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  40891154 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 40891082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 649 - 720
Target Start/End: Complemental strand, 38629614 - 38629543
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||| ||||||| | || | |||||||||||||||  ||||||||| |||| |||||||    
T  38629614 ttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattatatc 38629543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 649 - 722
Target Start/End: Original strand, 11828627 - 11828700
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatcta 722  Q
    ||||||||||||||||| ||||||| | ||   ||||||||||| |||  ||||||||| ||||||||||||||    
T  11828627 ttttcgtatggttcttaactaaattcaccataatttcctcaaatccattattttctcaaagtttgttatatcta 11828700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 17426658 - 17426730
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||||||||  ||  ||||||||| ||||||||||||    
T  17426658 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatctataattttctcaaagtttgttatatc 17426730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 38520159 - 38520087
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||| || ||| ||||||| | || | |||||||||||||||  ||||||||| ||||||||||||    
T  38520159 cttttcgtatgttttttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatc 38520087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 746
Target Start/End: Original strand, 23940834 - 23940934
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatct--agaaaggtgtatttttagttaaaa 745  Q
    ||||||||||| |||||| ||||||| | || | ||||||||||| | |  ||||||||| ||||||||||| |  | |||  |||||||||||||||||    
T  23940834 cttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaa 23940933  T
Q  746 a 746  Q
    |    
T  23940934 a 23940934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000003; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 20476572 - 20476500
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |||| | ||||||||||| |||  |||||||||  |||||||||||    
T  20476572 cttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaaatttgttatatc 20476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 643 - 743
Target Start/End: Original strand, 37655177 - 37655277
Alignment:
Q  643 cggttcttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatctagaaaggtgtatttttagtta 742  Q
    |||||||||| ||| |||||||| ||||||| | || |  ||||||||||||||  ||||||||| |||||||||| | | |||  ||||||||||||||    
T  37655177 cggttctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttataacaaaaaatatgtatttttagtta 37655276  T
Q  743 a 743  Q
    |    
T  37655277 a 37655277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 1138700 - 1138628
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| || | | ||| ||||||| |||  ||||||||| ||||||||||||    
T  1138700 cttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttatatc 1138628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 15855984 - 15855912
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  15855984 cttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 15855912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 16473096 - 16473024
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  16473096 cttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 16473024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 21259760 - 21259832
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||||  |||||| | || | |||||||||| ||||  ||||||||| ||||||||||||    
T  21259760 cttttcgtatggttcttagttaaattcaccatgatttcctcaaaatcataattttctcaaagtttgttatatc 21259832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 21262084 - 21262012
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||| |||||||||||| ||||||| |||| | ||||||||||| ||   ||||||||| ||||||||||||    
T  21262084 ctttttgtatggttcttaactaaattcatcatgatttcctcaaatccacaattttctcaaagtttgttatatc 21262012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 35420642 - 35420714
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  35420642 cttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 35420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 649 - 746
Target Start/End: Complemental strand, 12744966 - 12744868
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatat-ctagaaaggtgtatttttagttaaaaa 746  Q
    |||||||||| || ||  ||||||| | || | |||||||||||||||  ||||||||| ||||||||||| | | |||  ||||||||||||||||||    
T  12744966 ttttcgtatgatttttgactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaa 12744868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000003; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 2854562 - 2854634
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |  | | |||||||||||||||  ||||||||| ||||||||||||    
T  2854562 cttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatc 2854634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 3607759 - 3607831
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||| |||||||||||| ||||||| |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  3607759 ctttttgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatc 3607831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 6079525 - 6079453
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  6079525 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 6079453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 23698532 - 23698604
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |  | | |||||||||||||||  ||||||||| ||||||||||||    
T  23698532 cttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatc 23698604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 5189610 - 5189538
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | |||||| |||| |||  ||||||||| ||||||||||||    
T  5189610 cttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatc 5189538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 15324768 - 15324696
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| |  | | ||||||||||| |||  ||||||||| ||||||||||||    
T  15324768 cttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatc 15324696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 19954941 - 19955013
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||| ||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  19954941 cttttcgtatagttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 19955013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 27240954 - 27241026
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||| ||||||| |||  ||||||||| ||||||||||||    
T  27240954 cttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatc 27241026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 47940600 - 47940672
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||| ||| |||  ||||||||| ||||||||||||    
T  47940600 cttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatc 47940672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 743
Target Start/End: Original strand, 48645044 - 48645140
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatct-agaaaggtgtatttttagttaa 743  Q
    ||||||||||| |||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||| | |||  |||||||||||||||    
T  48645044 cttttcgtatgcttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaa 48645140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 48954244 - 48954316
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||| ||||||||||| ||||||| |  | | |||||||||||||||  ||||||||| ||||||||||||    
T  48954244 cttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatc 48954316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 50627272 - 50627200
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| |||||   |||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  50627272 cttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 50627200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 719
Target Start/End: Original strand, 51276725 - 51276796
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatat 719  Q
    |||||||||||||||||| ||||||| || | | ||||||||||| |||  ||||||||| |||| ||||||    
T  51276725 cttttcgtatggttcttaactaaattcattatgatttcctcaaatccataattttctcaaagtttattatat 51276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 650 - 720
Target Start/End: Original strand, 14387047 - 14387117
Alignment:
Q  650 tttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| |||| |||||||    
T  14387047 tttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatatc 14387117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 444 - 546
Target Start/End: Original strand, 1106 - 1200
Alignment:
Q  444 ttttctctatagaataactggtgaaaatttgatccacatatttt-cactttttactataattctttcatcatatgtgaatgtgagtatccatgtttgaat 542  Q
    |||||||||||| ||||||||||| ||||||| ||| | ||||| || |||||||| ||||||||||||         ||||||||||||||||||||||    
T  1106 ttttctctatagcataactggtgagaatttgagccaaacattttccaatttttactgtaattctttcat---------atgtgagtatccatgtttgaat 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.0000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 649 - 720
Target Start/End: Complemental strand, 43476086 - 43476015
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||| ||||||| | || | |||||||||||||||  ||||||||| |||| |||||||    
T  43476086 ttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattatatc 43476015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 1924010 - 1924082
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||| ||| |||  ||||||||| ||||||||||||    
T  1924010 cttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatc 1924082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 3117017 - 3116945
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| || | | ||| ||||||| |||  ||||||||| ||||||||||||    
T  3117017 cttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttatatc 3116945  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 9281377 - 9281449
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||| ||||||||||| ||||||| |  | | |||||||||||||||  ||||||||| ||||||||||||    
T  9281377 cttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatc 9281449  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 747
Target Start/End: Complemental strand, 22269863 - 22269763
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatat-ctagaaaggtgtatttttagttaaaaa 746  Q
    |||||||||||||||||| |||||   | || | ||||||||||| |||  ||||||||| ||||||||||| | | |||  ||||||||||||||||||    
T  22269863 cttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaa 22269764  T
Q  747 t 747  Q
    |    
T  22269763 t 22269763  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 24101862 - 24101934
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||  | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  24101862 cttttcgtatggttcttaactaaatataccatgatttcctcaaatccataattttctcaaagtttgttatatc 24101934  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 27920713 - 27920641
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  |||| |||| ||||||||||||    
T  27920713 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttttcaaagtttgttatatc 27920641  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 45408766 - 45408694
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||||  |||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  45408766 cttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatc 45408694  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 720
Target Start/End: Complemental strand, 2818806 - 2818735
Alignment:
Q  649 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 720  Q
    ||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||| ||||||    
T  2818806 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgatatatc 2818735  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 743
Target Start/End: Original strand, 9850788 - 9850883
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatctagaaaggtgtatttttagttaa 743  Q
    |||||||||||||||||| ||||||| | || | ||| || |||| |||  |||||||||  ||||||||||| | |||  |||||||||||||||    
T  9850788 cttttcgtatggttcttaactaaatttaccatgattttcttaaatccataattttctcaaaatttgttatatcaaaaaatatgtatttttagttaa 9850883  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 748
Target Start/End: Complemental strand, 6605875 - 6605775
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatctaga-aaggtgtatttttagttaaaaa 746  Q
    ||||| ||||||||||||| |||||| | || | ||||||||||| |||  ||||||||| |||||||||||| | | ||  ||||||||||||||| ||    
T  6605875 ctttttgtatggttcttac-taaatttaccatgatttcctcaaatgcataattttctcaaagtttgttatatccaaataatatgtatttttagttaagaa 6605777  T
Q  747 ta 748  Q
    ||    
T  6605776 ta 6605775  T

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Target: scaffold0163 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 648 - 722
Target Start/End: Original strand, 1969 - 2043
Alignment:
Q  648 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatcta 722  Q
    ||||| |||||||||||| ||||||| | || | ||||||||||| |||  ||||| ||| ||||||||||||||    
T  1969 ctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttatatcta 2043  T

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