View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4497_high_4 (Length: 282)
Name: NF4497_high_4
Description: NF4497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4497_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 16 - 271
Target Start/End: Original strand, 4567953 - 4568208
Alignment:
| Q |
16 |
caacacaaactttgtgctagcatttctttgaccatcattttaatcttaagctttgacaatactttcaatagttgttggaaattttcttcttccaccgttg |
115 |
Q |
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| T |
4567953 |
caacacaaactttgtgctagcatttctttgaccatcattttaatattaagctttgacaatactttcaatagttgttggaaattttcttcttccaccgttg |
4568052 |
T |
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| Q |
116 |
tattatctttctccttcatattctccatttcattcattagattttttgttgccattttttctcccttagaattgatttacaccttcataagtgggtcttc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4568053 |
tattatctttctccttcatattctccatttcattcattagattttttgttgccattttttctcccttagaattgatttacaccttcataagtgggtcttc |
4568152 |
T |
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| Q |
216 |
ctcctcgctatgttcttcacttggatattcctgttcactttcatcctcgatttcat |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4568153 |
ctcctcgctatgttcttcacttggatattcctgttcactttcatcctcgatttcat |
4568208 |
T |
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