View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4498-Insertion-1 (Length: 247)
Name: NF4498-Insertion-1
Description: NF4498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4498-Insertion-1 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 7439442 - 7439676
Alignment:
| Q |
8 |
ataggtacttagaagttagttagccattattttatatatagtatcgtgcccttcaactataatccatatcctatagacagcaagggaattgagtatacct |
107 |
Q |
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| T |
7439442 |
ataggtacttagaagttggttagaca-----ttatatatagtatcgtgcccttcaactataatccatatcctataaacagcaagggcattgagtatacct |
7439536 |
T |
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| Q |
108 |
aatttccatgatgagtgaggagcaaggaatatattccttctgttttaatcaagcttccaaattatttcactcattctcaccttcaaattcaatgcccttt |
207 |
Q |
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| T |
7439537 |
aatttccatgatgagtgaggagcaaggaatatattccttctgttttaatcaagcttccaaattatttcacccattctcatcttcaaattcaatgcccttt |
7439636 |
T |
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| Q |
208 |
cttcaattagcttattatttaatacagcaaaactcaatct |
247 |
Q |
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| T |
7439637 |
cttcaattagcttattatttaatacagcaaaactcaatct |
7439676 |
T |
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