View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4498_high_11 (Length: 281)

Name: NF4498_high_11
Description: NF4498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4498_high_11
NF4498_high_11
[»] chr7 (8 HSPs)
chr7 (6-265)||(45406684-45406942)
chr7 (6-246)||(42080708-42080948)
chr7 (179-245)||(17474750-17474816)
chr7 (179-245)||(17510234-17510300)
chr7 (179-245)||(17542914-17542980)
chr7 (179-245)||(17578398-17578464)
chr7 (145-243)||(43989689-43989786)
chr7 (147-243)||(29912589-29912683)
[»] chr3 (5 HSPs)
chr3 (6-246)||(431972-432214)
chr3 (108-246)||(20934942-20935079)
chr3 (146-244)||(32970441-32970539)
chr3 (163-264)||(50331958-50332057)
chr3 (147-244)||(19817384-19817479)
[»] scaffold0053 (1 HSPs)
scaffold0053 (85-246)||(31033-31195)
[»] scaffold1315 (1 HSPs)
scaffold1315 (14-243)||(517-749)
[»] scaffold1293 (1 HSPs)
scaffold1293 (14-243)||(1322-1554)
[»] chr4 (6 HSPs)
chr4 (16-243)||(42757432-42757662)
chr4 (163-261)||(13228683-13228779)
chr4 (172-246)||(50158192-50158266)
chr4 (183-243)||(42727943-42728003)
chr4 (147-244)||(55050042-55050137)
chr4 (179-243)||(39976666-39976730)
[»] chr8 (12 HSPs)
chr8 (15-237)||(18953205-18953425)
chr8 (174-263)||(13756525-13756612)
chr8 (133-245)||(14373888-14373998)
chr8 (194-265)||(30254508-30254577)
chr8 (147-244)||(16313228-16313323)
chr8 (147-244)||(34800828-34800923)
chr8 (163-264)||(42797285-42797384)
chr8 (173-265)||(10901452-10901542)
chr8 (172-264)||(23141804-23141894)
chr8 (192-244)||(23394814-23394864)
chr8 (103-232)||(38291782-38291911)
chr8 (179-243)||(21587045-21587109)
[»] chr2 (9 HSPs)
chr2 (86-246)||(6466154-6466312)
chr2 (111-238)||(36720078-36720205)
chr2 (111-263)||(3395400-3395550)
chr2 (172-237)||(36727642-36727707)
chr2 (210-264)||(5788918-5788970)
chr2 (151-238)||(29651783-29651870)
chr2 (208-246)||(19040701-19040739)
chr2 (172-241)||(25546947-25547016)
chr2 (208-244)||(39839132-39839168)
[»] chr6 (4 HSPs)
chr6 (147-236)||(31737199-31737288)
chr6 (163-264)||(1599670-1599769)
chr6 (208-246)||(7428529-7428567)
chr6 (147-244)||(23410068-23410163)
[»] chr5 (3 HSPs)
chr5 (109-263)||(9012660-9012812)
chr5 (108-246)||(38015877-38016015)
chr5 (147-244)||(4062156-4062251)
[»] chr1 (7 HSPs)
chr1 (172-265)||(43387108-43387199)
chr1 (165-264)||(22636320-22636417)
chr1 (208-246)||(1992426-1992464)
chr1 (147-244)||(17006472-17006567)
chr1 (208-246)||(20306777-20306815)
chr1 (147-244)||(34159524-34159619)
chr1 (208-246)||(40946523-40946561)
[»] scaffold0159 (1 HSPs)
scaffold0159 (210-264)||(33291-33343)
[»] scaffold0061 (1 HSPs)
scaffold0061 (79-243)||(44844-45010)
[»] scaffold0017 (1 HSPs)
scaffold0017 (79-243)||(153777-153943)
[»] scaffold0012 (1 HSPs)
scaffold0012 (147-244)||(31003-31098)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 6 - 265
Target Start/End: Complemental strand, 45406942 - 45406684
Alignment:
Q  6 aatgatacccaaaaactaataaaac-aaattattatcatgttgcgacttctatggcaacctacgttgggatgtctcatcatattagtcaaagagcaacaa 104  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45406942 aatgatacccaaaaactaataaaaataaattattataatgttgcgacttctatgggaacctacgttgggatgtctcatcatattagtcaaagagcaacaa 45406843  T
Q  105 catgtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaat 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  45406842 catgtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcctcttacatcaaat 45406743  T
Q  205 gtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactctcc 265  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  45406742 gtcaaattttaactcacaattgacacattaacatttctcc--attaagtatgagactctcc 45406684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 42080708 - 42080948
Alignment:
Q  6 aatgatacccaaaaactaataaaacaaattattatcatgttgcgacttctatggcaacctacgttgggatgtctcatcatattagtcaaagagcaacaac 105  Q
    ||||| |||||||||| || |||||||||  |||| |||||| ||||||||||  ||| ||| |||   ||  ||||| ||||||| |||||||||||||    
T  42080708 aatgacacccaaaaaccaacaaaacaaatctttataatgttgtgacttctatgtgaacttacattgtt-tgcatcatcgtattagttaaagagcaacaac 42080806  T
Q  106 at--gtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaa 203  Q
    |   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| ||    
T  42080807 acaagtgagatcgacatcacttcttcacccaaagtcctaaagcattaggtatatggataatct-cctcatatgtttctcaacatctactcttgcatctaa 42080905  T
Q  204 tgtcaaattttaactcacaattgacacattaacatttctccat 246  Q
    |||||||||||||||||| | ||||||||||| || |||||||    
T  42080906 tgtcaaattttaactcacgactgacacattaatatctctccat 42080948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 17474750 - 17474816
Alignment:
Q  179 tctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcca 245  Q
    |||||||||||  |||| ||| |||||| ||| ||||||||| | ||||||||||||||| ||||||    
T  17474750 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctcca 17474816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 17510234 - 17510300
Alignment:
Q  179 tctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcca 245  Q
    |||||||||||  |||| ||| |||||| ||| ||||||||| | ||||||||||||||| ||||||    
T  17510234 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctcca 17510300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 17542980 - 17542914
Alignment:
Q  179 tctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcca 245  Q
    |||||||||||  |||| ||| |||||| ||| ||||||||| | ||||||||||||||| ||||||    
T  17542980 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctcca 17542914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 17578464 - 17578398
Alignment:
Q  179 tctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcca 245  Q
    |||||||||||  |||| ||| |||||| ||| ||||||||| | ||||||||||||||| ||||||    
T  17578464 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctcca 17578398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 43989786 - 43989689
Alignment:
Q  145 gcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctc 243  Q
    |||||| ||||||| || ||||| || | |||||||||| |||||  | ||||||  ||| | ||||||||||||||| ||||||||||||||| ||||    
T  43989786 gcattatgtatatgaatcatctcacttaaatgtttctca-catctactattgcatacaatataaaattttaactcacacttgacacattaacatctctc 43989689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 29912683 - 29912589
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctc 243  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   ||||||||||| ||||| ||||||||||||||    
T  29912683 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcacacttgacgcattaacatttctc 29912589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 9e-76; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 432214 - 431972
Alignment:
Q  6 aatgatacccaaaaactaataaaacaaattattatcatgttgcgacttctatggcaacctacgttgggatgtctcatcatattagtcaaagagcaacaac 105  Q
    ||||| ||||||||||||| ||||||||  ||||| ||||||| |||||||||| ||||||| ||||  ||| |||||||||||||||||||||||||||    
T  432214 aatgacacccaaaaactaacaaaacaaaacattataatgttgcaacttctatgggaacctacattggattgtatcatcatattagtcaaagagcaacaac 432115  T
Q  106 at--gtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaa 203  Q
    |   ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |  ||||||||| ||    
T  432114 acaagtgagatcgacatcacttcttcacccaaagtcctaaagcattagttatatggataatcttcctcatatgtttctcaacatatactcttgcatccaa 432015  T
Q  204 tgtcaaattttaactcacaattgacacattaacatttctccat 246  Q
    |||| ||||||||||||||||||||||||||| || |||||||    
T  432014 tgtcgaattttaactcacaattgacacattaatatctctccat 431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 20934942 - 20935079
Alignment:
Q  108 gtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtc 207  Q
    |||||||  ||||||| |||||   |||||||| ||||||||| |||||||  | ||||| || | |||||||||| |||||  | ||||||  ||| |     
T  20934942 gtgagattcacatcacatcttctttcaaagtccgaaagcattatgtatatgagtcatctcacttaaatgtttctca-catctactattgcatacaatata 20935040  T
Q  208 aaattttaactcacaattgacacattaacatttctccat 246  Q
    |||||||||||||||  |||||||||||||| |||||||    
T  20935041 aaattttaactcacacctgacacattaacatctctccat 20935079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 32970441 - 32970539
Alignment:
Q  146 cattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    |||||||||||||| | ||||| || |||| ||| ||| |||||  ||||||||| ||||| ||| ||| ||||||| |||||| |||||||| |||||    
T  32970441 cattaggtatatgggtcatctcacttatatatttttcagcatctactcttgcatctaatgtgaaactttcactcacatttgacatattaacatatctcc 32970539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 50331958 - 50332057
Alignment:
Q  163 atctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactc 262  Q
    ||||| || ||||||||||||||||||  | ||||||  |||||   ||||||||||||| ||||||||||||||| ||||  ||||||| |||| ||||    
T  50331958 atctcacttatatgtttctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatctctc--tattaagcatgaaactc 50332055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 19817384 - 19817479
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  19817384 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 19817479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 31195 - 31033
Alignment:
Q  85 tattagtcaaagagcaacaacat--gtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctc 182  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31195 tattagttaaagagcaacaacacaagtgagatcgacatcacttcttcacccaaagtcctaaagcattaggtatatggataatct-cctcatatgtttctc 31097  T
Q  183 aacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccat 246  Q
    |||||||  ||||||||| |||||||||||||||||||| | ||||| ||||| || |||||||    
T  31096 aacatctactcttgcatctaatgtcaaattttaactcacgactgacaaattaatatctctccat 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1315 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 749 - 517
Alignment:
Q  14 ccaaaaactaataaaacaaattattatcatgttgcgacttctatggcaacctacgttgggatgtctcatcatattagtcaaagagcaaca--acatgtga 111  Q
    ||||||||||| ||||||||| ||||| |||||||||||| ||||  | ||||| ||| | ||| ||||||||||||||||| |||||||  ||| ||||    
T  749 ccaaaaactaacaaaacaaatcattataatgttgcgacttatatgaaagcctacattgagttgtatcatcatattagtcaaatagcaacagcacaagtga 650  T
Q  112 gatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgc--atcaaatgtcaa 209  Q
    |||||||||||||| |||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||  ||||||  ||| |||||  |    
T  649 gatcgacatcactttttcacccaaagtcctaagacattaggtatat-gataatctccctcatatgtttctcaacatctactcttgcatatccaatgttga 551  T
Q  210 attttaactcacaattgacacattaacatttctc 243  Q
    | ||| ||| |||| |||||||||||||| ||||    
T  550 acttttacttacaactgacacattaacatctctc 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1293 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 1322 - 1554
Alignment:
Q  14 ccaaaaactaataaaacaaattattatcatgttgcgacttctatggcaacctacgttgggatgtctcatcatattagtcaaagagcaaca--acatgtga 111  Q
    ||||||||||| ||||||||| ||||| |||||||||||| ||||  | ||||| ||| | ||| ||||||||||||||||| |||||||  ||| ||||    
T  1322 ccaaaaactaacaaaacaaatcattataatgttgcgacttatatgaaagcctacattgagttgtatcatcatattagtcaaatagcaacagcacaagtga 1421  T
Q  112 gatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgc--atcaaatgtcaa 209  Q
    |||||||||||||| |||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||  ||||||  ||| |||||  |    
T  1422 gatcgacatcactttttcacccaaagtcctaagacattaggtatat-gataatctccctcatatgtttctcaacatctactcttgcatatccaatgttga 1520  T
Q  210 attttaactcacaattgacacattaacatttctc 243  Q
    | ||| ||| |||| |||||||||||||| ||||    
T  1521 acttttacttacaactgacacattaacatctctc 1554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 42757432 - 42757662
Alignment:
Q  16 aaaaactaataaaacaaattattatcatgttgcgacttctatggcaacctacgttgggatgtctcatcatattagtcaaagagcaaca--acatgtgaga 113  Q
    ||||||||| ||||||||| ||||| |||||| ||||| ||||| | ||||| |||   ||| ||||||||||||||||| |||||||  ||| ||||||    
T  42757432 aaaaactaacaaaacaaatcattataatgttgtgacttatatggaagcctacattgatttgtatcatcatattagtcaaatagcaacaacacaagtgaga 42757531  T
Q  114 tcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgc--atcaaatgtcaaat 211  Q
    |||||||||| | |||| ||||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||  ||||||  ||| ||||| |||     
T  42757532 tcgacatcaccttttcacccaaagtcctaagacattaggtatat-gataatctccctcatatgtttttcaacatctactcttgcatatccaatgttaaac 42757630  T
Q  212 tttaactcacaattgacacattaacatttctc 243  Q
    ||| ||||||||||||||||||||||| ||||    
T  42757631 ttttactcacaattgacacattaacatctctc 42757662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 13228779 - 13228683
Alignment:
Q  163 atctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagact 261  Q
    ||||| || ||||||||||||||||||  | ||||||  |||||   ||||||||||||| ||||||||||||||| |||||  |||||||||||||||    
T  13228779 atctcacttatatgtttctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatctctcc--attaagtatgagact 13228683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 50158266 - 50158192
Alignment:
Q  172 atatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccat 246  Q
    ||||||| |||||||| |  |||||||| |||||| ||| ||||||||| | ||||||||||||||| |||||||    
T  50158266 atatgttgctcaacatatactcttgcataaaatgtgaaactttaactcatacttgacacattaacatctctccat 50158192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 42727943 - 42728003
Alignment:
Q  183 aacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctc 243  Q
    |||||||  ||||||||||||||| ||| ||||| | ||||||||||||||||||| ||||    
T  42727943 aacatctactcttgcatcaaatgtaaaactttaagtaacaattgacacattaacatatctc 42728003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 55050137 - 55050042
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  55050137 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 55050042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 39976730 - 39976666
Alignment:
Q  179 tctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctc 243  Q
    |||||||||||  ||||||||| ||||| ||| ||||| | |||||||||||| |||||| ||||    
T  39976730 tctcaacatctactcttgcatctaatgtgaaaatttaaattacaattgacacaataacatatctc 39976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 237
Target Start/End: Original strand, 18953205 - 18953425
Alignment:
Q  15 caaaaactaataaaacaaattattatcatgttgcgacttctatggcaacctacgttgggatgtctcatcatattagtcaaagagcaacaa--catgtgag 112  Q
    ||||| |||| ||||||||||||||| |||||| || |||||||| ||| ||| | ||| ||| |||||||  | |||||||||||||||  || |||||    
T  18953205 caaaagctaacaaaacaaattattataatgttgtgatttctatgggaac-tacat-gggttgtatcatcat--tggtcaaagagcaacaatacaagtgag 18953300  T
Q  113 atcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaatt 212  Q
    ||||| |||||||||||| ||||||||||||||||||| || | || ||||||||||||| |||||| |||||||||  ||||||||| |||||||||||    
T  18953301 atcgatatcacttcttcacccaaagtcctaaagcattaagtttttgaataatctccctcaaatgtttttcaacatctactcttgcatccaatgtcaaatt 18953400  T
Q  213 ttaactcacaattgacacattaaca 237  Q
    |||| ||||| ||||||||||||||    
T  18953401 ttaattcacagttgacacattaaca 18953425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 13756612 - 13756525
Alignment:
Q  174 atgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactct 263  Q
    ||||||||||||||||  | ||||||  |||||   ||||||||||||| ||||||||||||||| |||  |||||||| ||||||||||    
T  13756612 atgtttctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatatct--atattaagcatgagactct 13756525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 14373998 - 14373888
Alignment:
Q  133 caaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacat 232  Q
    ||||||| |||| |||||||||||||| | ||||| || | ||  | ||||||||||| ||||  ||| ||| | ||||||||||||||  |||||||||    
T  14373998 caaagtcttaaaacattaggtatatgggtcatctcacttacatagtgctcaacatctcctcttatatccaatttaaaattttaactcac--ttgacacat 14373901  T
Q  233 taacatttctcca 245  Q
    ||||||| |||||    
T  14373900 taacattactcca 14373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 30254577 - 30254508
Alignment:
Q  194 ttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactctcc 265  Q
    ||||||| | |||| |||||||||||||| ||||||||||||||| | |||   ||||||||||||||||||    
T  30254577 ttgcatctattgtcgaattttaactcacatttgacacattaacatctttcc--gttaagtatgagactctcc 30254508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 16313228 - 16313323
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  16313228 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 16313323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 34800923 - 34800828
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  34800923 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 34800828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 42797285 - 42797384
Alignment:
Q  163 atctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactc 262  Q
    ||||| || |||||||||||||||| |  | ||||||  |||||   ||||||||||||| ||||||||||||||| | ||  ||||||| |||||||||    
T  42797285 atctcacttatatgtttctcaacatatactattgcattcaatgtgttattttaactcacacttgacacattaacatctttc--tattaagcatgagactc 42797382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 10901452 - 10901542
Alignment:
Q  173 tatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactctcc 265  Q
    |||||| ||||||||||  | ||||||  |||||   ||||||||||||| |||| |||||||||| |||||  |||||||| ||||||||||    
T  10901452 tatgttactcaacatctactattgcattcaatgtgttattttaactcacatttgatacattaacatctctcc--attaagtacgagactctcc 10901542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 23141804 - 23141894
Alignment:
Q  172 atatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactctc 264  Q
    ||||||||||||||||||  | ||||||  |||||   ||||||||||| | ||||||| ||||||| ||||  ||||||| |||||||||||    
T  23141804 atatgtttctcaacatctactattgcattcaatgtgttattttaactcatacttgacacgttaacatctctc--tattaagcatgagactctc 23141894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 23394814 - 23394864
Alignment:
Q  192 tcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||| ||||| ||||||||||||||  ||||||||| |||||||||||    
T  23394814 tcttgcatccaatgtgaaattttaactcac--ttgacacatcaacatttctcc 23394864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 38291911 - 38291782
Alignment:
Q  103 aacatgtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaa 202  Q
    |||||||||||| ||||  || |||||| |||||  | |||  |||||||||||| |||||| || || |||||||||||||  ||   |||||||||||    
T  38291911 aacatgtgagattgacacgacatcttcatccaaaaccttaagacattaggtatattgataatttcacttatatgtttctcaatgtccactcttgcatcaa 38291812  T
Q  203 atgtcaaattttaactcacaattgacacat 232  Q
    ||||  || ||||| || |||||| |||||    
T  38291811 atgtggaactttaagtcgcaattgccacat 38291782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 21587045 - 21587109
Alignment:
Q  179 tctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctc 243  Q
    |||||||||||  ||||||||| ||||| ||| ||||| | |||||||||||| |||||| ||||    
T  21587045 tctcaacatctactcttgcatctaatgtgaaaatttaaattacaattgacacaataacatatctc 21587109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 6e-37; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 246
Target Start/End: Complemental strand, 6466312 - 6466154
Alignment:
Q  86 attagtcaaagagcaacaacat--gtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctca 183  Q
    |||||||||||||||||||||   ||||||||||||||||||||||| ||||| |||||||||||| |||||||| |||||||| |||| |||||| |||    
T  6466312 attagtcaaagagcaacaacacaagtgagatcgacatcacttcttcacccaaaatcctaaagcattgggtatatgaataatctctctcaaatgtttttca 6466213  T
Q  184 acatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccat 246  Q
    |||| |  ||||||||| ||||||||||||||| |||||    |||| |||||||||||||||    
T  6466212 acatttactcttgcatccaatgtcaaattttaattcaca----acacgttaacatttctccat 6466154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 36720205 - 36720078
Alignment:
Q  111 agatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaa 210  Q
    |||| |||||||| |||||| |||||||| | |  |||||||||||||||| ||||| || ||||||| |||||||| |  | |||||   | |||  ||    
T  36720205 agattgacatcacatcttcacccaaagtcttcagacattaggtatatggatcatctcacttatatgttgctcaacatatattattgcacacattgtagaa 36720106  T
Q  211 ttttaactcacaattgacacattaacat 238  Q
    |||||||||||| |||||||||||||||    
T  36720105 ttttaactcacacttgacacattaacat 36720078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 263
Target Start/End: Original strand, 3395400 - 3395550
Alignment:
Q  111 agatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaa 210  Q
    |||| ||||||||  ||||| ||||| || |||  |||||| ||||||  | ||||| || ||||||||||||||||||  | ||||||  || ||   |    
T  3395400 agattgacatcacaacttcacccaaaatcttaagacattagatatatgagtcatctcacttatatgtttctcaacatctactattgcattcaaagtgtta 3395499  T
Q  211 ttttaactcacaattgacacattaacatttctccatattaagtatgagactct 263  Q
    ||||||||||||  |||||||||||||| |||||  |||||||||||||||||    
T  3395500 ttttaactcacacctgacacattaacatctctcc--attaagtatgagactct 3395550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 36727642 - 36727707
Alignment:
Q  172 atatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaaca 237  Q
    |||||||||| |||||||  | ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  36727642 atatgtttcttaacatctacttttgcatctaatgtgaaattttaagtcacaattgacacattaaca 36727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 5788918 - 5788970
Alignment:
Q  210 attttaactcacaattgacacattaacatttctccatattaagtatgagactctc 264  Q
    ||||||||||||| ||||||||||||||| ||| |  ||||||||||||||||||    
T  5788918 attttaactcacatttgacacattaacatctcttc--attaagtatgagactctc 5788970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 29651870 - 29651783
Alignment:
Q  151 ggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacat 238  Q
    ||||||||||| || || || | |||||  |||||||||  ||||||||  ||||| ||| ||||||||||| |||||||||||||||    
T  29651870 ggtatatggatcatatcacttagatgttgttcaacatctactcttgcattcaatgtgaaactttaactcacatttgacacattaacat 29651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 19040739 - 19040701
Alignment:
Q  208 aaattttaactcacaattgacacattaacatttctccat 246  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  19040739 aaattttaactcacacttgacacattaacatctctccat 19040701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 25547016 - 25546947
Alignment:
Q  172 atatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttc 241  Q
    |||||||| ||||||| |  ||||||||| |||||  || ||||||||||| ||||||||||| ||||||    
T  25547016 atatgtttttcaacatatgttcttgcatccaatgtagaactttaactcacatttgacacattaccatttc 25546947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 39839132 - 39839168
Alignment:
Q  208 aaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  39839132 aaattttaactcacacttgacacattaacatctctcc 39839168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 31737199 - 31737288
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaac 236  Q
    |||||||||||| || || || ||  ||||||  |||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||    
T  31737199 attaggtatatgaatcatatcacttgtatgttgttcaacatctactcttgcatccaatgtgaaattttaactcacaattgacacattaac 31737288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 1599769 - 1599670
Alignment:
Q  163 atctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactc 262  Q
    ||||| || ||||||||||||||||||  | ||||||  |||||   ||||||||||||| ||||||||||||||| ||||  ||||||| |||||||||    
T  1599769 atctcacttatatgtttctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatctctc--tattaagcatgagactc 1599672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 7428529 - 7428567
Alignment:
Q  208 aaattttaactcacaattgacacattaacatttctccat 246  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  7428529 aaattttaactcacacttgacacattaacatctctccat 7428567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 23410068 - 23410163
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  23410068 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 23410163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 9012660 - 9012812
Alignment:
Q  109 tgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtca 208  Q
    |||||| || ||||| || ||| |||||||||||| |||||| ||||| || | | ||| || ||||||| ||||||||||  ||||| ||  | ||| |    
T  9012660 tgagattgatatcacatcgtcatccaaagtcctaaggcattatgtataagggtcagctcacttatatgttgctcaacatctactcttgaattcattgtga 9012759  T
Q  209 aattttaactcacaattgacacattaacatttctccatattaagtatgagactct 263  Q
    |||||||||| ||| |||||||||||| || |||||  ||||||| |||||||||    
T  9012760 aattttaactaacacttgacacattaatatgtctcc--attaagtgtgagactct 9012812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 38015877 - 38016015
Alignment:
Q  108 gtgagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtc 207  Q
    ||||||| ||||||||  ||||| ||||| || |||  |||||| ||||||  | ||||| || ||||||| ||||||||||  | ||||||  |||||     
T  38015877 gtgagattgacatcacaacttcacccaaaatcttaagtcattagatatatgagtcatctcacttatatgttgctcaacatctactattgcattcaatgtg 38015976  T
Q  208 aaattttaactcacaattgacacattaacatttctccat 246  Q
      ||||||||||||| ||||||||||||||| |||||||    
T  38015977 ttattttaactcacacttgacacattaacatctctccat 38016015  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 4062251 - 4062156
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  4062251 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 4062156  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 43387108 - 43387199
Alignment:
Q  172 atatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactctcc 265  Q
    ||||||||||||||||||  | ||||||  |||||  |||||||||||||| ||||||||||||||| ||||  | ||||||| ||||||||||    
T  43387108 atatgtttctcaacatctactattgcattcaatgtgtaattttaactcacacttgacacattaacatctctc--tgttaagtacgagactctcc 43387199  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 22636320 - 22636417
Alignment:
Q  165 ctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctccatattaagtatgagactctc 264  Q
    |||||| ||||||  ||||||||||  ||||||||  || |||||||||||||||||| |||| | |||||||| |||||  ||||||||| ||||||||    
T  22636320 ctcccttatatgtagctcaacatctactcttgcattcaaagtcaaattttaactcacacttgaaaaattaacatctctcc--attaagtataagactctc 22636417  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 1992464 - 1992426
Alignment:
Q  208 aaattttaactcacaattgacacattaacatttctccat 246  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  1992464 aaattttaactcacacttgacacattaacatctctccat 1992426  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 17006472 - 17006567
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  17006472 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 17006567  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 20306777 - 20306815
Alignment:
Q  208 aaattttaactcacaattgacacattaacatttctccat 246  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  20306777 aaattttaactcacacttgacacattaacatctctccat 20306815  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 34159619 - 34159524
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  34159619 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 34159524  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 40946561 - 40946523
Alignment:
Q  208 aaattttaactcacaattgacacattaacatttctccat 246  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  40946561 aaattttaactcacacttgacacattaacatctctccat 40946523  T

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Target: scaffold0159 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 33291 - 33343
Alignment:
Q  210 attttaactcacaattgacacattaacatttctccatattaagtatgagactctc 264  Q
    ||||||||||||| ||||||||||||||| ||| |  ||||||||||||||||||    
T  33291 attttaactcacatttgacacattaacatctcttc--attaagtatgagactctc 33343  T

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Target: scaffold0061 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 243
Target Start/End: Original strand, 44844 - 45010
Alignment:
Q  79 tcatcatattagtcaaagagcaacaacatgt--gagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatg 176  Q
    |||||||||||| | ||||||||| |||| |  ||||| |||| ||| |||||| | |||  | ||| ||||||||||||| | | ||||| || ||||     
T  44844 tcatcatattagactaagagcaactacatatttgagattgacaccacatcttcaccaaaaaccataaggcattaggtatattgttcatctcacttatata 44943  T
Q  177 tttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctc 243  Q
    |||||||||||||  |||| || ||||| |  || ||||| | |||||||||| |||||||| ||||    
T  44944 tttctcaacatctactctttcaacaaatatagaactttaagtgacaattgacatattaacatatctc 45010  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 153943 - 153777
Alignment:
Q  79 tcatcatattagtcaaagagcaacaacatgt--gagatcgacatcacttcttcaaccaaagtcctaaagcattaggtatatggataatctccctcatatg 176  Q
    |||||||||||| | ||||||||| |||| |  ||||| |||| ||| |||||| | |||  | ||| ||||||||||||| | | ||||| || ||||     
T  153943 tcatcatattagactaagagcaactacatatttgagattgacaccacatcttcaccaaaaaccataaggcattaggtatattgttcatctcacttatata 153844  T
Q  177 tttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctc 243  Q
    |||||||||||||  |||| || ||||| |  || ||||| | |||||||||| |||||||| ||||    
T  153843 tttctcaacatctactctttcaacaaatatagaactttaagtgacaattgacatattaacatatctc 153777  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 31003 - 31098
Alignment:
Q  147 attaggtatatggataatctccctcatatgtttctcaacatctcatcttgcatcaaatgtcaaattttaactcacaattgacacattaacatttctcc 244  Q
    ||||||||||||||| ||  | || ||||||| ||||||||||  |||| |||| ||||| |   |||||||| || |||||||||||||||||||||    
T  31003 attaggtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtgac--tttaactcgcacttgacacattaacatttctcc 31098  T

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