View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4500-Insertion-2 (Length: 836)

Name: NF4500-Insertion-2
Description: NF4500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4500-Insertion-2
NF4500-Insertion-2
[»] chr8 (10 HSPs)
chr8 (7-836)||(39689241-39690074)
chr8 (71-216)||(39705309-39705454)
chr8 (244-300)||(9935399-9935455)
chr8 (262-300)||(39727321-39727359)
chr8 (262-300)||(39735553-39735591)
chr8 (244-300)||(7771352-7771408)
chr8 (244-300)||(32891009-32891065)
chr8 (244-300)||(32897133-32897189)
chr8 (265-300)||(42993008-42993043)
chr8 (244-290)||(14418068-14418114)
[»] chr2 (5 HSPs)
chr2 (239-300)||(36750535-36750596)
chr2 (243-300)||(28682927-28682984)
chr2 (261-300)||(35084676-35084715)
chr2 (261-300)||(35090649-35090688)
chr2 (261-294)||(44716804-44716837)
[»] chr1 (9 HSPs)
chr1 (104-204)||(51684775-51684874)
chr1 (244-300)||(50306309-50306365)
chr1 (244-301)||(1078343-1078400)
chr1 (261-294)||(24963702-24963735)
chr1 (244-300)||(44410130-44410186)
chr1 (261-296)||(25387504-25387539)
chr1 (261-300)||(34740106-34740145)
chr1 (267-301)||(38151981-38152015)
chr1 (261-290)||(27955290-27955319)
[»] chr4 (9 HSPs)
chr4 (244-301)||(4632906-4632963)
chr4 (244-300)||(26956812-26956868)
chr4 (259-300)||(49976707-49976748)
chr4 (268-300)||(10733253-10733285)
chr4 (268-300)||(10739346-10739378)
chr4 (268-300)||(10947022-10947054)
chr4 (268-300)||(10953115-10953147)
chr4 (244-300)||(26963324-26963380)
chr4 (242-300)||(50168713-50168771)
[»] chr7 (11 HSPs)
chr7 (261-300)||(35148004-35148043)
chr7 (244-300)||(12804120-12804176)
chr7 (261-300)||(351906-351945)
chr7 (244-300)||(3817294-3817350)
chr7 (268-300)||(28420966-28420998)
chr7 (261-300)||(339491-339530)
chr7 (261-300)||(3811169-3811208)
chr7 (265-300)||(42767299-42767334)
chr7 (261-300)||(43540105-43540144)
chr7 (244-297)||(20239074-20239127)
chr7 (263-300)||(22741920-22741957)
[»] chr5 (11 HSPs)
chr5 (261-300)||(24054455-24054494)
chr5 (244-300)||(30384359-30384417)
chr5 (266-300)||(14610269-14610303)
chr5 (268-300)||(12686186-12686218)
chr5 (268-300)||(12692288-12692320)
chr5 (244-300)||(28525369-28525425)
chr5 (244-300)||(28531465-28531521)
chr5 (261-300)||(8706465-8706504)
chr5 (245-300)||(19066091-19066146)
chr5 (242-300)||(7389529-7389587)
chr5 (263-293)||(26509974-26510004)
[»] chr3 (10 HSPs)
chr3 (261-300)||(30051102-30051141)
chr3 (261-300)||(55003412-55003451)
chr3 (261-300)||(10238212-10238251)
chr3 (261-300)||(10244334-10244373)
chr3 (261-300)||(53069054-53069093)
chr3 (242-300)||(10760631-10760689)
chr3 (263-300)||(48128049-48128086)
chr3 (243-300)||(49157799-49157856)
chr3 (265-297)||(28964988-28965020)
chr3 (244-300)||(49151732-49151788)
[»] chr6 (8 HSPs)
chr6 (244-300)||(32035269-32035325)
chr6 (261-300)||(8650803-8650842)
chr6 (261-300)||(8662781-8662820)
chr6 (266-300)||(31756220-31756254)
chr6 (265-300)||(21197025-21197060)
chr6 (261-300)||(21782753-21782792)
chr6 (243-296)||(4580303-4580356)
chr6 (243-300)||(21190848-21190905)
[»] scaffold1114 (1 HSPs)
scaffold1114 (261-300)||(1205-1244)
[»] scaffold0440 (1 HSPs)
scaffold0440 (265-300)||(1198-1233)
[»] scaffold0236 (1 HSPs)
scaffold0236 (268-300)||(5655-5687)
[»] scaffold0363 (1 HSPs)
scaffold0363 (244-290)||(605-651)


Alignment Details
Target: chr8 (Bit Score: 571; Significance: 0; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 571; E-Value: 0
Query Start/End: Original strand, 7 - 836
Target Start/End: Complemental strand, 39690074 - 39689241
Alignment:
Q  7 actccggagaattgaacgagtgcattaaacaacatctttgatgcnnnnnnnnnnnnnnnnaaagttaaataaagaaatgatcaaagaaaaagtgaatatc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||                ||| ||||||||||||||||||||||||||||||||||||    
T  39690074 actccggagaattgaacgagtgcattaaacaacatctttgatgcttttttgaattttttaaaa-ttaaataaagaaatgatcaaagaaaaagtgaatatc 39689976  T
Q  107 acctgcaccaaatcatcttttcattttcacacaaggttcgtccacaatcatctatgaaattattgttgtaacccattgattgaaatcacgttaactatga 206  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39689975 acttgcaccaaatcatcttttcattttcacacaaggtccgtccacaatcatctatgaaattattgttgtaacccattgattgaaatcacgttaactatga 39689876  T
Q  207 acaaacagaaaaaagattgaaataaagttatgcattatgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattattgagtc 306  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39689875 acacacagaaaaaagattgaaataaagttgtgcattatgttggagacttaggttttaataaaaacagatttcataaaacatgttcaacaattattgagtc 39689776  T
Q  307 ttcaactaccatgaagaacacatactagtctttgaggatcttctcaattattgtcacagcaaaaccaaatatacannnnnnnnnnnnnnnnnnnnnatgt 406  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||                     ||||    
T  39689775 ttcaaccaccacgaagaacacatactagtccttgaggatcttctcaattattgtcacagcaaaaccgaacataca--tttttttttttttttttttatgt 39689678  T
Q  407 tggctccttcaacaactaatttccgactctgtgttgttccctactcctcaacaaggacatctttgagtttgaggctattttaatttagataccnnnnnnn 506  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  39689677 tggctccttcaacaactaatttttgactctttgttgttccctactcctcaacaaggacatctttgagtttgaggctattttaatttagatacc-tttttt 39689579  T
Q  507 nngagatataataatagtatgtgattgttttttagtgggccaagaacttcaccggccaaggattgctgatcactcatcatgcaaatgctaagctaaaaca 606  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39689578 ttgagatataataatagtatgtgattgttttttagtgggccaagaacttcaccggccaaggattgctgatcactcatcatgcaaatgctaagctaaaaca 39689479  T
Q  607 gcggaccactctcgtatagggttatgagttaggaccgcgtcacaaatgcacagtaaaataacacgcggatatcgtgcttttcttcttgtgtgtgtgtaat 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39689478 gcggaccactctcgtatagggttatgagttaggaccgcgtcacaaatgcacagtaaaataacacgcggatatcgtgcttttcttcttgtgtgtgtgtaat 39689379  T
Q  707 ctgtgttgggtacatgcacgcttttgaattgacacta--tcttcttaaatnnnnnnntgtttaaatgatgcagacagagggagatacaccacttgt---- 800  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||       |||||||||||||||||||||||||||||||||||||||        
T  39689378 ctgtgttgggtacatgcacgcttttgaattgacactatctcttcttaaataaaaaaatgtttaaatgatgcagacagagggagatacaccacttgtgtat 39689279  T
Q  801 --tcgattcacattccgaaacaaacggaattttatcta 836  Q
      ||||||||||||| ||||||||||||||||||||||    
T  39689278 tctcgattcacattctgaaacaaacggaattttatcta 39689241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 39705309 - 39705454
Alignment:
Q  71 ttaaataaagaaatgatcaaagaaaaagtgaatatcacctgcaccaaatcatcttttcattttcacacaaggttcgtccacaatcatctatgaaattatt 170  Q
    |||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||||   ||||||| ||||||||||||||||    
T  39705309 ttaaataaagaaattatcaaacaaaaagtgaatatcacctgtactaaatcatcttttcatcttcacacaaggtctatccacaaccatctatgaaattatt 39705408  T
Q  171 gttgtaacccattgattgaaatcacgttaactatgaacaaacagaa 216  Q
    || ||||| |||||| ||| |||| | |||| || |||||||||||    
T  39705409 gtcgtaactcattgaatgagatcatgctaacgatcaacaaacagaa 39705454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 9935455 - 9935399
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || ||||||||||||||||||||||||||||||||||||||||    
T  9935455 tgttggaaatttaggtcttaataaaaacagatttcataaaacatgttcaacaattat 9935399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 39727321 - 39727359
Alignment:
Q  262 taataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  39727321 taataaaaatagatttcataaaacatgttcaacaattat 39727359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 39735553 - 39735591
Alignment:
Q  262 taataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  39735553 taataaaaatagatttcataaaacatgttcaacaattat 39735591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 7771408 - 7771352
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  7771408 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 7771352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 32891065 - 32891009
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  32891065 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 32891009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 32897189 - 32897133
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  32897189 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 32897133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 42993008 - 42993043
Alignment:
Q  265 taaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||| |||||||||||||||||    
T  42993008 taaaaacagatttcataatacatgttcaacaattat 42993043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 14418114 - 14418068
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgtt 290  Q
    ||||||| | ||| || ||||||||||||||||||||||||||||||    
T  14418114 tgttggaaatttaggtcttaataaaaacagatttcataaaacatgtt 14418068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 36750596 - 36750535
Alignment:
Q  239 cattatgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||    
T  36750596 cattatgttggaaatttaagtcttaataaaaacagatttcataaaacatgttcaacaattat 36750535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 28682927 - 28682984
Alignment:
Q  243 atgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||| | ||| || |||||| |||||||||||||||||||||||||||||||||    
T  28682927 atgttggaaatttaggtcttaatataaacagatttcataaaacatgttcaacaattat 28682984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 35084676 - 35084715
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  35084676 ttaatataaacagatttcataaaacatgttcaacaattat 35084715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 35090649 - 35090688
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  35090649 ttaatataaacagatttcataaaacatgttcaacaattat 35090688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 44716804 - 44716837
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaac 294  Q
    ||||||||||||||| ||||||||||||||||||    
T  44716804 ttaataaaaacagatatcataaaacatgttcaac 44716837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 51684775 - 51684874
Alignment:
Q  104 atcacctgcaccaaatcatcttttcattttcacacaaggttcgtccacaatcatctatgaaattattgttgtaacccattgattgaaatcacgttaacta 203  Q
    |||| |||||||||||||||||||||||||||| |||||| ||| || || ||| |   |||||||||||| ||||||||||||| ||||| ||||||||    
T  51684775 atcatctgcaccaaatcatcttttcattttcacccaaggtccgt-cagaaccatatcaaaaattattgttgcaacccattgattgcaatcatgttaacta 51684873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 50306365 - 50306309
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| |||||||||||||||||||||||||||||||||    
T  50306365 tgttggaaatttaggtcttaatataaacagatttcataaaacatgttcaacaattat 50306309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 1078400 - 1078343
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattatt 301  Q
    ||||||| | ||| || |||||| ||||||||||||||| ||||||||||||||||||    
T  1078400 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattatt 1078343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 24963702 - 24963735
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaac 294  Q
    ||||||||||||||||||||||||||||||||||    
T  24963702 ttaataaaaacagatttcataaaacatgttcaac 24963735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 44410186 - 44410130
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || ||| |||||||||||||||||||||||||||||| |||||    
T  44410186 tgttggaaatttaggtcttactaaaaacagatttcataaaacatgttcaacgattat 44410130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 25387504 - 25387539
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaa 296  Q
    |||||| |||||||||||||||||||||||||||||    
T  25387504 ttaatataaacagatttcataaaacatgttcaacaa 25387539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 34740145 - 34740106
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  34740145 ttaatataaacagatttcataaaacatgttcatcaattat 34740106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 267 - 301
Target Start/End: Original strand, 38151981 - 38152015
Alignment:
Q  267 aaaacagatttcataaaacatgttcaacaattatt 301  Q
    |||| ||||||||||||||||||||||||||||||    
T  38151981 aaaatagatttcataaaacatgttcaacaattatt 38152015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 290
Target Start/End: Complemental strand, 27955319 - 27955290
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgtt 290  Q
    ||||||||||||||||||||||||||||||    
T  27955319 ttaataaaaacagatttcataaaacatgtt 27955290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 4632963 - 4632906
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattatt 301  Q
    ||||||| | ||| || |||||||||||||||||||||||||||||||||||||||||    
T  4632963 tgttggaaatttaggtcttaataaaaacagatttcataaaacatgttcaacaattatt 4632906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 26956812 - 26956868
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||||||||||||||||||||||||||||||| |||||    
T  26956812 tgttggaaatttaggtcttaataaaaacagatttcataaaacatgttcaacgattat 26956868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 49976748 - 49976707
Alignment:
Q  259 ttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  49976748 ttttaataaaaacaaatttcataaaacatattcaacaattat 49976707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 10733253 - 10733285
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  10733253 aaacagatttcataaaacatgttcaacaattat 10733285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 10739346 - 10739378
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  10739346 aaacagatttcataaaacatgttcaacaattat 10739378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 10947022 - 10947054
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  10947022 aaacagatttcataaaacatgttcaacaattat 10947054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 10953115 - 10953147
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  10953115 aaacagatttcataaaacatgttcaacaattat 10953147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 26963324 - 26963380
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||||||||| ||||||||||||||||||||| |||||    
T  26963324 tgttggaaatttaggtcttaataaaaacaaatttcataaaacatgttcaacgattat 26963380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 50168771 - 50168713
Alignment:
Q  242 tatgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||| | ||| || ||||||||| |||||| ||||||||| |||||||||||||    
T  50168771 tatgttggaaatttaggtcttaataaaaccagattacataaaacacgttcaacaattat 50168713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 35148004 - 35148043
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35148004 ttaataaaaacagatttcataaaacatgttcaacaattat 35148043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 12804176 - 12804120
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||||||||||||||||||||||||||||||| |||||    
T  12804176 tgttggaaatttaggtcttaataaaaacagatttcataaaacatgttcaacgattat 12804120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 351945 - 351906
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  351945 ttaatataaacagatttcataaaacatgttcaacaattat 351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 3817294 - 3817350
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  3817294 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 3817350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 28420966 - 28420998
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  28420966 aaacagatttcataaaacatgttcaacaattat 28420998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 339530 - 339491
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  339530 ttaatataaagagatttcataaaacatgttcaacaattat 339491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 3811169 - 3811208
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  3811169 ttaatataaacagatttcataatacatgttcaacaattat 3811208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 42767299 - 42767334
Alignment:
Q  265 taaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||| |||||||||||||||||    
T  42767299 taaaaacagatttcataatacatgttcaacaattat 42767334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 43540144 - 43540105
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  43540144 ttaataaaaacagatttcatagaacatgttcaataattat 43540105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 20239127 - 20239074
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaat 297  Q
    ||||||| | ||| || |||||| ||||| ||||||||||||||||||||||||    
T  20239127 tgttggaaatttaggtcttaatataaacaaatttcataaaacatgttcaacaat 20239074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 22741920 - 22741957
Alignment:
Q  263 aataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  22741920 aataagaacaggtttcataaaacatgttcaacaattat 22741957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 24054494 - 24054455
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24054494 ttaataaaaacagatttcataaaacatgttcaacaattat 24054455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 30384359 - 30384417
Alignment:
Q  244 tgttggagacttaagttttaataaaa--acagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  30384359 tgttggaaatttaggttttaataaaaaaacagatttcataaaacatgttcaacaattat 30384417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 300
Target Start/End: Complemental strand, 14610303 - 14610269
Alignment:
Q  266 aaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||||    
T  14610303 aaaaacagatttcataaaacatgttcaacaattat 14610269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 12686186 - 12686218
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  12686186 aaacagatttcataaaacatgttcaacaattat 12686218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 12692288 - 12692320
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  12692288 aaacagatttcataaaacatgttcaacaattat 12692320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 28525369 - 28525425
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  28525369 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 28525425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 28531465 - 28531521
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  28531465 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 28531521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 8706465 - 8706504
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  8706465 ttaataaaaatagatttcataaaatatgttcaacaattat 8706504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 19066091 - 19066146
Alignment:
Q  245 gttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| | |||||| |||||||||||| |||||||||| |||||||||| |||||    
T  19066091 gttggaaatttaagtcttaataaaaacatatttcataaaccatgttcaacgattat 19066146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 7389529 - 7389587
Alignment:
Q  242 tatgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||| | ||| || |||||| ||||| ||||||||| |||||||||||||||||    
T  7389529 tatgttggaaatttaggtcttaatataaacaaatttcataatacatgttcaacaattat 7389587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 26510004 - 26509974
Alignment:
Q  263 aataaaaacagatttcataaaacatgttcaa 293  Q
    |||||||||||||||||||||||||||||||    
T  26510004 aataaaaacagatttcataaaacatgttcaa 26509974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 30051102 - 30051141
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30051102 ttaataaaaacagatttcataaaacatgttcaacaattat 30051141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 55003412 - 55003451
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55003412 ttaataaaaacagatttcataaaacatgttcaacaattat 55003451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 10238212 - 10238251
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  10238212 ttaatataaacagatttcataaaacatgttcaacaattat 10238251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 10244334 - 10244373
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  10244334 ttaatataaacagatttcataaaacatgttcaacaattat 10244373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 53069054 - 53069093
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  53069054 ttaataaaaacagattttataaaacatgttcaacaattat 53069093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 10760631 - 10760689
Alignment:
Q  242 tatgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||| | ||| || ||| |||||||||||||||||| |||||||||||||||||    
T  10760631 tatgttggaaatttaggtcttattaaaaacagatttcataatacatgttcaacaattat 10760689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 48128049 - 48128086
Alignment:
Q  263 aataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||| |||||||||||||||||||    
T  48128049 aataaaaacagatttcatgaaacatgttcaacaattat 48128086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 49157856 - 49157799
Alignment:
Q  243 atgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  49157856 atgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 49157799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 28965020 - 28964988
Alignment:
Q  265 taaaaacagatttcataaaacatgttcaacaat 297  Q
    |||||||||||||||||||||||||||||||||    
T  28965020 taaaaacagatttcataaaacatgttcaacaat 28964988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 49151788 - 49151732
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| ||||||||||||||| |||||||||||||||||    
T  49151788 tgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaattat 49151732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 32035269 - 32035325
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||| | ||| || |||||| |||||||||||||||||||||||||||||||||    
T  32035269 tgttggaaatttaggtcttaatataaacagatttcataaaacatgttcaacaattat 32035325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 8650803 - 8650842
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  8650803 ttaatataaacagatttcataaaacatgttcaacaattat 8650842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 8662781 - 8662820
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  8662781 ttaatataaacagatttcataaaacatgttcaacaattat 8662820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 300
Target Start/End: Original strand, 31756220 - 31756254
Alignment:
Q  266 aaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||||    
T  31756220 aaaaacagatttcataaaacatgttcaacaattat 31756254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 21197025 - 21197060
Alignment:
Q  265 taaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||| |||||    
T  21197025 taaaaacagatttcataaaacatgttcaacgattat 21197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 21782753 - 21782792
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  21782753 ttaatataaacagatttcataatacatgttcaacaattat 21782792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 4580303 - 4580356
Alignment:
Q  243 atgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaa 296  Q
    |||||||| | ||| || |||||| ||||||||||||||| |||||||||||||    
T  4580303 atgttggaaatttaggtcttaatataaacagatttcataatacatgttcaacaa 4580356  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 21190848 - 21190905
Alignment:
Q  243 atgttggagacttaagttttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||| | ||| || ||| || ||||||||||||||||| |||||||||||||||    
T  21190848 atgttggaaatttaggtcttattataaacagatttcataaaatatgttcaacaattat 21190905  T

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Target: scaffold1114 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 1244 - 1205
Alignment:
Q  261 ttaataaaaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  1244 ttaataaaaacagatttcataaaacatgttcaaccattat 1205  T

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Target: scaffold0440 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 1198 - 1233
Alignment:
Q  265 taaaaacagatttcataaaacatgttcaacaattat 300  Q
    ||||||||||||||||||||||||||||||||||||    
T  1198 taaaaacagatttcataaaacatgttcaacaattat 1233  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 5687 - 5655
Alignment:
Q  268 aaacagatttcataaaacatgttcaacaattat 300  Q
    |||||||||||||||||||||||||||||||||    
T  5687 aaacagatttcataaaacatgttcaacaattat 5655  T

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Target: scaffold0363 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 605 - 651
Alignment:
Q  244 tgttggagacttaagttttaataaaaacagatttcataaaacatgtt 290  Q
    ||||||| | ||| || ||||||||||||||||||||||||||||||    
T  605 tgttggaaatttaggtcttaataaaaacagatttcataaaacatgtt 651  T

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