View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4501-Insertion-3 (Length: 596)
Name: NF4501-Insertion-3
Description: NF4501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4501-Insertion-3 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 550; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 550; E-Value: 0
Query Start/End: Original strand, 8 - 596
Target Start/End: Original strand, 37304743 - 37305331
Alignment:
| Q |
8 |
gaatgcactaccaatgtgttttgctggttatcaaactttgacgccatctacgatttccttgaaataaaaaactaaaatttcatctataaccatcgtgaaa |
107 |
Q |
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| T |
37304743 |
gaatgcgctaccaatgtgttttgctggttatcaaactttgacgccatccacgatttccttgaaataaaaaactaaaatttcatctgtaacca-cgtgaaa |
37304841 |
T |
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| Q |
108 |
acccgcaaagttgtgcataacattgctcaaatcactatactgattaatgcaatttcagatctcaatccatgcaaaaacttatttgttgatattatcaagc |
207 |
Q |
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| T |
37304842 |
acccgcaaagttgtgcataacattgctcaaatcactatattgattaatgcaatttcagatctcaatccatgcaaaaacttacttgttgatattatcaagc |
37304941 |
T |
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| Q |
208 |
ttaacattactatgaggttggcatccctaaataggtcctgtaccata-gtgtacacaatcacacttcactgtaaaacttctgttgatttcatttttcatg |
306 |
Q |
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| T |
37304942 |
ttaacattactatgaggttggcatccctaaataggtcctgtaccataagtgtacacaatcacacttcactgtaaaacttctgttgatttcatttttcatg |
37305041 |
T |
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| Q |
307 |
ttgtctatcacaaagtttgctcaagtggcatatgttctgttttgtattctaccttgctttaaattaatttaacacttactatatattacacaaaatatat |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37305042 |
ttgtctatcacaaagtttgctcaagtggcatatgttctgttttgtattctaccttgctttaaattaatttaacacttactatatattacacaaaatatat |
37305141 |
T |
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| Q |
407 |
tttatatagtaagtactaaatagaccaaacacattgaacatacatattatcatgagttctcttcttcaaccacatgctagtgattgtgagcaagacaata |
506 |
Q |
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| T |
37305142 |
tttatatagtaagtactaaatagaccaaacacattgaacatacatattatcatgagttctcttcttcaaccacatgctagtgattgtgagcaagacaata |
37305241 |
T |
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| Q |
507 |
gctctaaactgttgccaacaattgtggaatttgagtccacatttgaggtggaagccaccaaatcagtggaaactgatcaggaggagggta |
596 |
Q |
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| T |
37305242 |
gctctaaactgttgccaacaattgtggaatttgagtccacatttgaggtggaagccaccaaatcagtggaaactgataaggaggagggta |
37305331 |
T |
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