View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4502_high_2 (Length: 239)
Name: NF4502_high_2
Description: NF4502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4502_high_2 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 30809483 - 30809704
Alignment:
| Q |
18 |
atagtattctctctgtctgtcgagatttgaatcttaacatattaggtttcaatcgaatttgaatttcaaatcatcatacattgtaagagtctaatctttt |
117 |
Q |
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| T |
30809483 |
atagtattctctctatctgtcgagatttgaatcttaacatattaggtttcaatcgaatttgaatttcaaattatcatacattgtaagagtctaatctttt |
30809582 |
T |
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| Q |
118 |
acccaactcaaccatttgttgatagtaacgacactcactcattatttttcaaaagaaatagtatgtgttattttccgcatttacaaccaattaaatgtac |
217 |
Q |
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| T |
30809583 |
acccaactcaaccatttgttgatagtaacgacactcactcattatttttcaaaagaaatagtatgtgttattttccgcatttacaaccaattaaatgtac |
30809682 |
T |
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| Q |
218 |
gattagagtgaagctaccaatt |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
30809683 |
gattagagtgaagctaccaatt |
30809704 |
T |
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