View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4503_high_6 (Length: 308)
Name: NF4503_high_6
Description: NF4503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4503_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 9496217 - 9495926
Alignment:
| Q |
1 |
aaatgttgcagctgttggagatgctaaaccatttgtactatatgaagaagagaaagcaaccatatcatccactgtcctattcatgtcagcttcacgcaaa |
100 |
Q |
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| T |
9496217 |
aaatgttgcagctgttggagatgctaaaccatttgtactatatgaagaagagaaagcaaccatatcatccactgtcctattcatgtcagcttcacgcaaa |
9496118 |
T |
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| Q |
101 |
gcccataaactgtcatcagagctgagagagggaggccgagaaaaaccttttcctggattttcagaagggttccagtacattacaccgccaccaaagtatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9496117 |
gcccataaactgtcatcagagctgagagagggaggccgagaaaaaccttttcctggattttcagaagggttccagtacattacaccgccaccaaagtatt |
9496018 |
T |
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| Q |
201 |
gattataatctataccagaaacagcatgaaagtcatactcttcctctgatacatagaggttgtcaaattcatctgtgaactgtgtatttatt |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9496017 |
gattataatctataccagaaacagcatgaaagtcatactcttcctctgatacatagaggttgtcaaattcatctgtgaactgtgtatttatt |
9495926 |
T |
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