View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4503_low_13 (Length: 203)
Name: NF4503_low_13
Description: NF4503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4503_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 45241935 - 45241769
Alignment:
| Q |
16 |
attcttatgtttccctatatcttagtaaatttcttcaatataggatgaagtctagtattttgttatgcatcttctattcttatattattctgtatattaa |
115 |
Q |
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| T |
45241935 |
attcttatgtttccctatatcttagtaaatttcttcaatataggatgaagtctagtattttgttatgcatcttctattcttatattattctgtat----a |
45241840 |
T |
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| Q |
116 |
ttagaacatgtcatagaacttattagaagctattttttgctgcaaaaaatttggcatggcacatgaagcttg |
187 |
Q |
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|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
45241839 |
ttagaacatgtcatagaactta-tagaagctatttttcgctgcaaaaaatttggcatggcacatgaagcttg |
45241769 |
T |
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