View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4505-Insertion-4 (Length: 601)

Name: NF4505-Insertion-4
Description: NF4505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4505-Insertion-4
NF4505-Insertion-4
[»] chr1 (27 HSPs)
chr1 (8-601)||(28716168-28716761)
chr1 (8-112)||(28710589-28710693)
chr1 (444-485)||(40610370-40610411)
chr1 (445-485)||(51703002-51703042)
chr1 (443-482)||(30631733-30631772)
chr1 (442-485)||(49453618-49453661)
chr1 (443-485)||(39010955-39010997)
chr1 (443-485)||(46948120-46948162)
chr1 (444-485)||(36690461-36690502)
chr1 (444-485)||(36706562-36706603)
chr1 (440-485)||(41558134-41558179)
chr1 (441-485)||(31436959-31437003)
chr1 (442-482)||(48872838-48872878)
chr1 (442-485)||(43755573-43755616)
chr1 (443-482)||(49425880-49425919)
chr1 (444-482)||(4638069-4638107)
chr1 (442-476)||(8934421-8934455)
chr1 (441-483)||(28253158-28253200)
chr1 (443-485)||(51571567-51571609)
chr1 (444-485)||(2362510-2362551)
chr1 (444-481)||(7645443-7645480)
chr1 (444-485)||(31290097-31290138)
chr1 (445-482)||(35846209-35846246)
chr1 (442-482)||(15061990-15062030)
chr1 (441-485)||(15083080-15083124)
chr1 (441-485)||(34187405-34187449)
chr1 (444-476)||(37516061-37516093)
[»] chr2 (26 HSPs)
chr2 (186-443)||(10537424-10537679)
chr2 (444-482)||(11229210-11229248)
chr2 (444-485)||(14714127-14714168)
chr2 (448-485)||(25801704-25801741)
chr2 (444-481)||(45693356-45693393)
chr2 (441-485)||(13104620-13104664)
chr2 (442-485)||(3091882-3091925)
chr2 (442-485)||(22390293-22390336)
chr2 (442-485)||(32750139-32750182)
chr2 (442-485)||(34249722-34249765)
chr2 (442-485)||(36133115-36133158)
chr2 (442-485)||(44189966-44190009)
chr2 (443-485)||(2013173-2013215)
chr2 (444-482)||(5067531-5067569)
chr2 (443-485)||(7086012-7086054)
chr2 (443-485)||(11164264-11164306)
chr2 (448-482)||(15019036-15019070)
chr2 (440-482)||(26321582-26321624)
chr2 (444-482)||(34138925-34138963)
chr2 (444-485)||(1876241-1876282)
chr2 (443-480)||(19913931-19913968)
chr2 (440-469)||(28244242-28244271)
chr2 (444-485)||(29795577-29795618)
chr2 (449-482)||(43725349-43725382)
chr2 (112-140)||(10537327-10537355)
chr2 (443-479)||(15141597-15141633)
[»] chr7 (29 HSPs)
chr7 (444-485)||(10591293-10591334)
chr7 (441-482)||(155867-155908)
chr7 (444-485)||(12142025-12142066)
chr7 (442-485)||(8792487-8792530)
chr7 (14-81)||(40609244-40609311)
chr7 (444-482)||(25887727-25887765)
chr7 (441-479)||(29355479-29355517)
chr7 (444-485)||(21858888-21858929)
chr7 (442-482)||(7807199-7807239)
chr7 (439-479)||(30982250-30982290)
chr7 (444-476)||(32171024-32171056)
chr7 (441-485)||(37351876-37351920)
chr7 (441-481)||(43657147-43657187)
chr7 (440-479)||(28861994-28862033)
chr7 (442-485)||(43445548-43445591)
chr7 (442-485)||(48866817-48866860)
chr7 (443-485)||(6353870-6353912)
chr7 (444-481)||(5378772-5378809)
chr7 (444-485)||(5978720-5978761)
chr7 (444-485)||(26153801-26153842)
chr7 (444-481)||(40717127-40717164)
chr7 (440-469)||(42663241-42663270)
chr7 (444-485)||(44894363-44894404)
chr7 (441-482)||(45607168-45607209)
chr7 (445-482)||(47193071-47193108)
chr7 (445-485)||(7990214-7990254)
chr7 (446-482)||(32154441-32154477)
chr7 (444-476)||(41077396-41077428)
chr7 (442-482)||(43260135-43260175)
[»] chr3 (32 HSPs)
chr3 (442-482)||(31997947-31997987)
chr3 (443-485)||(7231894-7231936)
chr3 (440-485)||(20380774-20380819)
chr3 (443-482)||(7293987-7294026)
chr3 (443-482)||(51673007-51673046)
chr3 (444-482)||(20893131-20893169)
chr3 (443-481)||(41111960-41111998)
chr3 (440-482)||(51464151-51464193)
chr3 (444-481)||(20162584-20162621)
chr3 (444-485)||(29706044-29706085)
chr3 (444-488)||(42475866-42475910)
chr3 (441-481)||(46473273-46473313)
chr3 (440-480)||(46574287-46574327)
chr3 (443-482)||(6126599-6126638)
chr3 (442-485)||(11173591-11173634)
chr3 (434-485)||(28300525-28300576)
chr3 (442-485)||(37303524-37303567)
chr3 (443-482)||(43169642-43169681)
chr3 (440-482)||(3730953-3730995)
chr3 (440-482)||(32687844-32687886)
chr3 (447-485)||(44695153-44695191)
chr3 (443-481)||(46953094-46953132)
chr3 (447-485)||(49130995-49131033)
chr3 (442-479)||(9099466-9099503)
chr3 (444-485)||(19418049-19418090)
chr3 (445-482)||(28269950-28269987)
chr3 (444-485)||(33007502-33007543)
chr3 (444-485)||(37302963-37303004)
chr3 (444-485)||(41957654-41957695)
chr3 (442-482)||(108574-108614)
chr3 (453-485)||(37215129-37215161)
chr3 (442-482)||(51650501-51650541)
[»] chr5 (24 HSPs)
chr5 (442-485)||(20719902-20719945)
chr5 (441-482)||(11767876-11767917)
chr5 (444-485)||(24431507-24431548)
chr5 (442-485)||(2117527-2117570)
chr5 (442-485)||(9403654-9403697)
chr5 (440-479)||(21575712-21575751)
chr5 (442-485)||(33567126-33567169)
chr5 (443-485)||(17990355-17990397)
chr5 (443-485)||(27392590-27392632)
chr5 (443-481)||(40566104-40566142)
chr5 (445-482)||(125236-125273)
chr5 (440-481)||(33393704-33393745)
chr5 (444-485)||(39595415-39595456)
chr5 (445-485)||(12349926-12349966)
chr5 (442-482)||(19127268-19127308)
chr5 (443-482)||(11306840-11306879)
chr5 (442-485)||(33243628-33243671)
chr5 (444-482)||(3141640-3141678)
chr5 (440-485)||(1274354-1274399)
chr5 (444-485)||(9714024-9714065)
chr5 (439-480)||(18638725-18638766)
chr5 (442-478)||(6515326-6515362)
chr5 (441-485)||(18660756-18660800)
chr5 (443-479)||(35124829-35124865)
[»] chr4 (36 HSPs)
chr4 (443-485)||(31275287-31275329)
chr4 (436-485)||(1033289-1033338)
chr4 (444-485)||(5234360-5234401)
chr4 (440-485)||(11063974-11064019)
chr4 (440-485)||(25523081-25523126)
chr4 (442-482)||(39241189-39241229)
chr4 (433-485)||(42915097-42915149)
chr4 (442-485)||(47998734-47998777)
chr4 (442-485)||(55927125-55927168)
chr4 (443-485)||(51389457-51389499)
chr4 (442-479)||(3624349-3624386)
chr4 (440-485)||(4896385-4896430)
chr4 (444-485)||(15596537-15596578)
chr4 (444-485)||(16004216-16004257)
chr4 (444-485)||(28480427-28480468)
chr4 (444-485)||(28481301-28481342)
chr4 (444-485)||(28482176-28482217)
chr4 (441-482)||(31240793-31240834)
chr4 (445-485)||(5123480-5123520)
chr4 (442-482)||(36792477-36792517)
chr4 (443-482)||(22257084-22257123)
chr4 (442-485)||(24772812-24772855)
chr4 (442-485)||(25476762-25476805)
chr4 (442-485)||(31658060-31658103)
chr4 (442-485)||(36408091-36408134)
chr4 (442-485)||(36413214-36413257)
chr4 (442-485)||(46173678-46173721)
chr4 (442-485)||(51717171-51717214)
chr4 (444-481)||(1580171-1580208)
chr4 (444-485)||(3286959-3287000)
chr4 (443-480)||(19315040-19315077)
chr4 (444-485)||(38844379-38844420)
chr4 (444-485)||(51296066-51296107)
chr4 (444-485)||(53583017-53583058)
chr4 (441-481)||(41119424-41119464)
chr4 (442-482)||(51039004-51039044)
[»] chr8 (29 HSPs)
chr8 (440-485)||(43403925-43403970)
chr8 (441-481)||(40413249-40413289)
chr8 (443-482)||(14029130-14029169)
chr8 (442-485)||(23258173-23258216)
chr8 (444-482)||(21648819-21648857)
chr8 (444-485)||(40102164-40102205)
chr8 (442-482)||(30925541-30925581)
chr8 (442-478)||(41344556-41344592)
chr8 (442-485)||(154431-154474)
chr8 (442-485)||(295687-295730)
chr8 (443-482)||(1370183-1370222)
chr8 (443-482)||(11223747-11223786)
chr8 (443-482)||(24946143-24946182)
chr8 (443-482)||(39719129-39719168)
chr8 (442-485)||(44103907-44103950)
chr8 (443-482)||(45101540-45101579)
chr8 (444-482)||(3650258-3650296)
chr8 (443-485)||(21273598-21273640)
chr8 (443-477)||(40842073-40842107)
chr8 (444-485)||(5359479-5359520)
chr8 (445-482)||(7325858-7325895)
chr8 (444-485)||(9046960-9047001)
chr8 (444-481)||(15200415-15200452)
chr8 (441-482)||(42543366-42543407)
chr8 (450-485)||(20284848-20284884)
chr8 (450-485)||(21071477-21071513)
chr8 (442-482)||(32175100-32175140)
chr8 (442-482)||(34474095-34474135)
chr8 (444-480)||(42157154-42157190)
[»] chr6 (18 HSPs)
chr6 (444-485)||(30733150-30733191)
chr6 (442-485)||(2241713-2241756)
chr6 (441-484)||(17457577-17457620)
chr6 (443-482)||(26378273-26378312)
chr6 (442-485)||(30714814-30714857)
chr6 (442-481)||(34021059-34021098)
chr6 (445-482)||(24752375-24752412)
chr6 (442-485)||(1897827-1897870)
chr6 (442-485)||(16336957-16337000)
chr6 (442-485)||(32253922-32253965)
chr6 (445-483)||(2340541-2340579)
chr6 (443-485)||(28004967-28005009)
chr6 (442-479)||(25554380-25554417)
chr6 (444-485)||(32853033-32853074)
chr6 (443-479)||(2163826-2163862)
chr6 (443-479)||(2175459-2175495)
chr6 (442-482)||(9954693-9954733)
chr6 (442-478)||(30906550-30906586)
[»] scaffold0018 (1 HSPs)
scaffold0018 (442-481)||(36147-36186)
[»] scaffold0508 (1 HSPs)
scaffold0508 (442-482)||(11423-11463)
[»] scaffold0115 (1 HSPs)
scaffold0115 (441-485)||(15075-15119)
[»] scaffold0036 (1 HSPs)
scaffold0036 (441-481)||(18148-18188)
[»] scaffold0060 (1 HSPs)
scaffold0060 (444-482)||(6961-6999)
[»] scaffold0501 (1 HSPs)
scaffold0501 (448-485)||(10409-10446)
[»] scaffold0057 (1 HSPs)
scaffold0057 (444-485)||(39020-39061)
[»] scaffold0286 (1 HSPs)
scaffold0286 (443-479)||(18547-18583)
[»] scaffold0001 (1 HSPs)
scaffold0001 (441-469)||(396019-396047)


Alignment Details
Target: chr1 (Bit Score: 582; Significance: 0; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 582; E-Value: 0
Query Start/End: Original strand, 8 - 601
Target Start/End: Complemental strand, 28716761 - 28716168
Alignment:
Q  8 gacttggcttttgcagacttagttggcaccatgtaactaggaaccgatggagagcttgcaagactttcatcatcgctcactattgatccagcaaaggagt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28716761 gacttggcttttgcagacttagttggcaccatgtaactaggaaccgatggagagcttgcaagactttcatcatcgctcactattgatccagcaaaggagt 28716662  T
Q  108 acctcatctgagtcgggtaggattggcaagcaccaacaaccagtcgctggcacaaagcctcggtcatctcctataggaaagcatcaacgttcattttata 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28716661 acctcatctgagtcgggtaggattggcaagcaccaacaaccagtcgctggcacaaagcctcggtcatctcctataggaaagcatcaacgttcattttata 28716562  T
Q  208 ggaacccacagacggaagacgccatctgatatttgaaaccgggattggaactgactggtcctgcgatatcatttggtgcactgttaaaattgcagatcgc 307  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28716561 ggaacccacagactgaagacgccatctgatatttgaaaccgggattggaactgactggtcctgcgatatcattttgtgcactgttaaaattgcagatcgc 28716462  T
Q  308 tttgatagcacttttataacagtcggatgcacaaggaatttcaatttcctcaaaacacctcttatttctaatccaccagattttataaaaatggataaca 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28716461 tttgatagcacttttataacagtcggatgcacaaggaatttcaatttcctcaaaacacctcttatttctaatccaccagattttataaaaatggataaca 28716362  T
Q  408 ccacttgaatcacatcagccccttcattaatgataagagtagtgatatttgaacaaccatttgagacaacttttgtgaaaaggacttagcagaagtgtca 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28716361 ccacttgaatcacatcagccccttcattaatgataagagtagtgatatttgaacaaccatttgagacaacttttgtgaaaaggacttggcagaagtgtca 28716262  T
Q  508 ctacagctaaaattcacgcctaaatgagatacaaaacacacagatctcacctactcacaatccataaataaatgcccaacagtctcattacaaa 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28716261 ctacagctaaaattcacgcctaaatgagatacaaaacacacagatctcacctactcacaatccataaataaatgcccaacagtctcattacaaa 28716168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 28710693 - 28710589
Alignment:
Q  8 gacttggcttttgcagacttagttggcaccatgtaactaggaaccgatggagagcttgcaagactttcatcatcgctcactattgatccagcaaaggagt 107  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  28710693 gacttggcttttgcagacttagttggcaccatgtaacttggaacagctggagagcttgcaagactttcatcatccctcactattgatccagcaatggagt 28710594  T
Q  108 acctc 112  Q
     ||||    
T  28710593 gcctc 28710589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 40610411 - 40610370
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  40610411 gagtagtgatatttgaacatccatttgagacaacttttgtga 40610370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 485
Target Start/End: Original strand, 51703002 - 51703042
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  51703002 agtagtgatatttgaacaaccatttcagacaacttttgtga 51703042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 30631733 - 30631772
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  30631733 agagtagtgatatttgaacaaccattttagacaacttttg 30631772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 49453661 - 49453618
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  49453661 aagagtagtgatatttgaacaactatttgatacaacttttgtga 49453618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 39010997 - 39010955
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  39010997 agagtagtgttatttgaacaaccatatgagacaacttttgtga 39010955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 46948162 - 46948120
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  46948162 agagtagtgatatttgaacatccatttgagacaactcttgtga 46948120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 36690461 - 36690502
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  36690461 gagtagtgttatttgaacaaccatatgagacaacttttgtga 36690502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 36706562 - 36706603
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  36706562 gagtagtgttatttgaacaaccatatgagacaacttttgtga 36706603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 485
Target Start/End: Complemental strand, 41558179 - 41558134
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  41558179 ataagagtagtgatatttgtacaaccatttgtgacaactattgtga 41558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 31437003 - 31436959
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||    
T  31437003 taagagtagtgttatttgaacaaccatatgagataacttttgtga 31436959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 482
Target Start/End: Original strand, 48872838 - 48872878
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  48872838 aagagtagtgatatttgaacaaccatttcatacaacttttg 48872878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 43755573 - 43755616
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||    
T  43755573 aagagtaatgatatttgaacatccatttgagacaactcttgtga 43755616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Complemental strand, 49425919 - 49425880
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  49425919 agagtagtgatatttgaacaaccatttcatacaacttttg 49425880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 482
Target Start/End: Complemental strand, 4638107 - 4638069
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  4638107 gagtagtgatatttgaacaaccatttcatacaacttttg 4638069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 476
Target Start/End: Original strand, 8934421 - 8934455
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaa 476  Q
    ||||||||||||||||||||||||||||| |||||    
T  8934421 aagagtagtgatatttgaacaaccatttgtgacaa 8934455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 483
Target Start/End: Complemental strand, 28253200 - 28253158
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgt 483  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||    
T  28253200 taagagtggtgttatttgaacaaccatatgagacaacttttgt 28253158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 51571609 - 51571567
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  51571609 agagttgtgatatttgaacaaccatttaatacaacttttgtga 51571567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 2362551 - 2362510
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| |||||| |||| ||||||||    
T  2362551 gagtagtgatatttgaacaactatttgatacaatttttgtga 2362510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 7645443 - 7645480
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  7645443 gagtagtgatatttgaacatccatttgagacaattttt 7645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 31290097 - 31290138
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||| ||||||||||||||||||||| | |||||||||||||    
T  31290097 gagtggtgatatttgaacaaccatttcacacaacttttgtga 31290138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 482
Target Start/End: Original strand, 35846209 - 35846246
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  35846209 agtagtcatatttgaacaaccattttagacaacttttg 35846246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 15062030 - 15061990
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||| | | ||||||||    
T  15062030 aagagtagtgatatttgaacaaccatttcatataacttttg 15061990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 15083124 - 15083080
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||    
T  15083124 taagagaaatgatatttgaacaaccatttttgacaacttttgtga 15083080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 34187449 - 34187405
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||| |||||||||||||||||||| |||||||| || |||||    
T  34187449 taagaggagtgatatttgaacaaccatgtgagacaatttatgtga 34187405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 444 - 476
Target Start/End: Complemental strand, 37516093 - 37516061
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaa 476  Q
    ||||||||||||||||||||||| |||||||||    
T  37516093 gagtagtgatatttgaacaaccacttgagacaa 37516061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 8e-44; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 186 - 443
Target Start/End: Original strand, 10537424 - 10537679
Alignment:
Q  186 aagcatcaacgttcattttataggaacccacagacggaagacgccatctgatatttgaaaccgggattggaactgactggtcctgcgata--------tc 277  Q
    |||||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||     ||||| || ||||         ||    
T  10537424 aagcatcaacattcattttataggaacccgtagacggaagacaccatctgatatttgaaaccgggattgga-----ctggttctacgattgcagcaattc 10537518  T
Q  278 atttggtgcactgttaaaattgcagatcgctttgatagcacttttataacagtcggatgcacaaggaatttcaatttcctcaaaacacctcttatttcta 377  Q
    |||| || ||| |||||||      |||||||||||||||||||||||||| |  ||||||| | |||||||| || |||||||||| ||||||||||||    
T  10537519 attttgtacaccgttaaaa------atcgctttgatagcacttttataacaattagatgcactatgaatttcagttccctcaaaacatctcttatttcta 10537612  T
Q  378 atccaccagattttataa-aaatggataacaccacttgaatcacatcagccccttcattaatgataa 443  Q
    ||||||| ||||| |||| ||||||||| |||||||||| |||||||||||||||||| ||| ||||    
T  10537613 atccaccggatttcataacaaatggatagcaccacttgactcacatcagccccttcatcaataataa 10537679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 482
Target Start/End: Original strand, 11229210 - 11229248
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  11229210 gagtagtgatatttgaacaaccattttagacaacttttg 11229248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 14714168 - 14714127
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  14714168 gagtagtgatatttgaacatccatttgagacaatttttgtga 14714127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 485
Target Start/End: Original strand, 25801704 - 25801741
Alignment:
Q  448 agtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  25801704 agtgatatttgaacaacaatttgagacaacttttgtga 25801741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 45693356 - 45693393
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||| |||||||||||||||||||||||    
T  45693356 gagtagtgatatttaaacaaccatttgagacaactttt 45693393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 13104664 - 13104620
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||    
T  13104664 taagagtagtgttatttgaacaaccatatgagacaatttttgtga 13104620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 3091925 - 3091882
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||  |||||| |||||||||||||    
T  3091925 aagagtagtgatatttgaacaattatttgatacaacttttgtga 3091882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 22390336 - 22390293
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||    
T  22390336 aagagtagagatatttgaacatccatttgagacaactcttgtga 22390293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 32750182 - 32750139
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||    
T  32750182 aagagtagtgttatttgaacaaccatatgagacaatttttgtga 32750139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 34249765 - 34249722
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||    
T  34249765 aagagtagtgttatttgaacaaccatatgagacaatttttgtga 34249722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 36133158 - 36133115
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||| |||| | |||||||||||||    
T  36133158 aagagtagtgatatttgaacaactatttcatacaacttttgtga 36133115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 44190009 - 44189966
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||    
T  44190009 aagagtagtgatatttgaacatccattcgagacaactcttgtga 44189966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 2013173 - 2013215
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||    
T  2013173 agagtagtgatattttaacatccatttgagacaactcttgtga 2013215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 482
Target Start/End: Original strand, 5067531 - 5067569
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  5067531 gagtagtgatatttgaacaatcattttagacaacttttg 5067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 7086012 - 7086054
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||    
T  7086012 agagtagtgttatttgaacaaccatatgagacaatttttgtga 7086054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 11164264 - 11164306
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||| |||||||||||||||| |||||| |||||||||||||    
T  11164264 agagtggtgatatttgaacaactatttgatacaacttttgtga 11164306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 482
Target Start/End: Original strand, 15019036 - 15019070
Alignment:
Q  448 agtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||| |||||||||    
T  15019036 agtgatatttgaacaaccatttgaggcaacttttg 15019070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 482
Target Start/End: Original strand, 26321582 - 26321624
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||| ||||| | ||||||||||    
T  26321582 ataagagtagtgatatttgaacaatcatttcatacaacttttg 26321624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 482
Target Start/End: Original strand, 34138925 - 34138963
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  34138925 gagtagtgatatttgaacaaccatttcatacaacttttg 34138963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 1876241 - 1876282
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| ||||| ||||||||| |||||||||||||||||    
T  1876241 gagtagtgttatttcaacaaccatatgagacaacttttgtga 1876282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 480
Target Start/End: Complemental strand, 19913968 - 19913931
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttt 480  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  19913968 agagtagtgatatttgaacaaccatttcatacaacttt 19913931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 469
Target Start/End: Original strand, 28244242 - 28244271
Alignment:
Q  440 ataagagtagtgatatttgaacaaccattt 469  Q
    ||||||||||||||||||||||||||||||    
T  28244242 ataagagtagtgatatttgaacaaccattt 28244271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 29795618 - 29795577
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| | |||||| |||||||||||||    
T  29795618 gagtagtgatatttgaacatcaatttgaaacaacttttgtga 29795577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 482
Target Start/End: Complemental strand, 43725382 - 43725349
Alignment:
Q  449 gtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||| ||||||||||||    
T  43725382 gtgatatttgaacaaccattttagacaacttttg 43725349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 10537327 - 10537355
Alignment:
Q  112 catctgagtcgggtaggattggcaagcac 140  Q
    |||||||||||||||||||||||||||||    
T  10537327 catctgagtcgggtaggattggcaagcac 10537355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 479
Target Start/End: Complemental strand, 15141633 - 15141597
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactt 479  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  15141633 agagtagtgacatttgaacatccatttgagacaactt 15141597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 10591334 - 10591293
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10591334 gagtagtgatatttgaacaaccatttgagacaacttttgtga 10591293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 155867 - 155908
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  155867 taagagtagtgatatttgaacaaccattttagacaacttttg 155908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 12142066 - 12142025
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  12142066 gagtagtgatatttgaacaaccatttgatacaacttttgtga 12142025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 8792487 - 8792530
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  8792487 aagagtaatgatatttgaacaaccatttgatacaacttttgtga 8792530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 40609244 - 40609311
Alignment:
Q  14 gcttttgcagacttagttggcaccatgtaactaggaaccgatggagagcttgcaagactttcatcatc 81  Q
    ||||| ||||| | ||| |||||||| ||||| ||||| ||||||||||| |||||||||||||||||    
T  40609244 gctttcgcagattgagtcggcaccatataacttggaactgatggagagctagcaagactttcatcatc 40609311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 482
Target Start/End: Complemental strand, 25887765 - 25887727
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25887765 gagtagtgatatttgaacaaccattttagacaacttttg 25887727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 29355517 - 29355479
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaactt 479  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  29355517 taagagtagtgatatttgaacaaccatttaagacaactt 29355479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 21858929 - 21858888
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  21858929 gagtagtgatatttgaacaaccattttaaacaacttttgtga 21858888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 7807239 - 7807199
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  7807239 aagagtagtgatatttgaacaaccatttcatacaacttttg 7807199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 479
Target Start/End: Original strand, 30982250 - 30982290
Alignment:
Q  439 gataagagtagtgatatttgaacaaccatttgagacaactt 479  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  30982250 gataagagtagtgatatttgaacaaccatttttgacaactt 30982290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 476
Target Start/End: Original strand, 32171024 - 32171056
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaa 476  Q
    |||||||||||||||||||||||||||||||||    
T  32171024 gagtagtgatatttgaacaaccatttgagacaa 32171056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 485
Target Start/End: Original strand, 37351876 - 37351920
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||    
T  37351876 taagagtagtgatatttgaacaatcatttgatataacttttgtga 37351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 481
Target Start/End: Complemental strand, 43657187 - 43657147
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  43657187 taagagtagtgatatttgaacaaccatttcatacaactttt 43657147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Original strand, 28861994 - 28862033
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaactt 479  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  28861994 ataagagtagtgatatttgaacaatcatttgtgacaactt 28862033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 43445591 - 43445548
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||    
T  43445591 aagagtagtgatatttgaacaatcatttgatacaatttttgtga 43445548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 48866817 - 48866860
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| | |||||| |||||||||||||    
T  48866817 aagagtagtgatatttgaacatctatttgaaacaacttttgtga 48866860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 6353912 - 6353870
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||| ||| |||||| |||||||||||||    
T  6353912 agagtagtgatatttgaaaaactatttgatacaacttttgtga 6353870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Complemental strand, 5378809 - 5378772
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  5378809 gagtagtgatatttaaacatccatttgagacaactttt 5378772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 5978761 - 5978720
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  5978761 gagtagtgatatttgaacaaccatatgatacaactcttgtga 5978720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 26153842 - 26153801
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||| ||| ||||||||||| |||||    
T  26153842 gagtagtgatatttgaacaaacatatgagacaacttatgtga 26153801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 40717127 - 40717164
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||||||||||||||| | |||||||||    
T  40717127 gagtagtgatatttgaacaaccatttcatacaactttt 40717164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 469
Target Start/End: Complemental strand, 42663270 - 42663241
Alignment:
Q  440 ataagagtagtgatatttgaacaaccattt 469  Q
    ||||||||||||||||||||||||||||||    
T  42663270 ataagagtagtgatatttgaacaaccattt 42663241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 44894363 - 44894404
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| |||||||||| || ||||||||    
T  44894363 gagtagtgatatttgaacatccatttgagataatttttgtga 44894404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 45607209 - 45607168
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||| |||| ||| ||||||||    
T  45607209 taagagtagtgatatttgaacaactattttagataacttttg 45607168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 47193108 - 47193071
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  47193108 agtagtgatatttgaacaaccattttagataacttttg 47193071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 7990254 - 7990214
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||  |||||||||||||| ||||||    
T  7990254 agtagtgatatttgaacattcatttgagacaactgttgtga 7990214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 482
Target Start/End: Original strand, 32154441 - 32154477
Alignment:
Q  446 gtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||| | ||||||||||    
T  32154441 gtagtgatatttgaacaaccatttcatacaacttttg 32154477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 444 - 476
Target Start/End: Original strand, 41077396 - 41077428
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaa 476  Q
    |||||||||||||||||| ||||||||||||||    
T  41077396 gagtagtgatatttgaaccaccatttgagacaa 41077428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 43260175 - 43260135
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||| |||||||||||||||||| | ||||||||||    
T  43260175 aagagtagtcatatttgaacaaccatttcatacaacttttg 43260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 31997987 - 31997947
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31997987 aagagtagtgatatttgaacaaccatttgagacaacttttg 31997947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 7231894 - 7231936
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  7231894 agagtagtgatatttgaacaaccatttgatacaacttttgtga 7231936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 20380774 - 20380819
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||||||| | |||||||||||||    
T  20380774 ataagagtagtgatatttgaacaaccattttaaacaacttttgtga 20380819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 7293987 - 7294026
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  7293987 agagtagtgatatttgaacaaccattttagacaacttttg 7294026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 482
Target Start/End: Complemental strand, 51673046 - 51673007
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  51673046 agagtagtgatatttgaacaaccattttagacaacttttg 51673007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 482
Target Start/End: Original strand, 20893131 - 20893169
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  20893131 gagtagtgatattttaacaaccatttgagacaacttttg 20893169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 481
Target Start/End: Original strand, 41111960 - 41111998
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  41111960 agagtagtgatatttgaacatccatttgagacaactttt 41111998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 482
Target Start/End: Original strand, 51464151 - 51464193
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||||| | ||||||||||    
T  51464151 ataagagtagtgatatttgaacaaccattttatacaacttttg 51464193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 20162584 - 20162621
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20162584 gagtagtgatatttgaacatccatttgagacaactttt 20162621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 29706085 - 29706044
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  29706085 gagtagtgatatttgaacaactatttgatacaacttttgtga 29706044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 488
Target Start/End: Original strand, 42475866 - 42475910
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtgaaaa 488  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||    
T  42475866 gagtagtgttatttgaacaaccatataagacaacttttgtgaaaa 42475910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 481
Target Start/End: Complemental strand, 46473313 - 46473273
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  46473313 taagagtaatgatatttgaacaaccatttgatacaactttt 46473273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 480
Target Start/End: Complemental strand, 46574327 - 46574287
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttt 480  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  46574327 ataagagtagtgatatttgtacaaccatttgtgacaacttt 46574287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Complemental strand, 6126638 - 6126599
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  6126638 agagtagtgatatttgaacaaccatttcatacaacttttg 6126599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 11173634 - 11173591
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  11173634 aagagtaataatatttgaacaaccatttgatacaacttttgtga 11173591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 485
Target Start/End: Original strand, 28300525 - 28300576
Alignment:
Q  434 ttaatgataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||| ||| |||||||||||||||||||||||| ||| |||||| ||||||    
T  28300525 ttaataatatgagtagtgatatttgaacaaccatatgatacaactcttgtga 28300576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 37303567 - 37303524
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||| |||||||||||| || |||||||||||||||||    
T  37303567 aagagtagtgttatttgaacaactatatgagacaacttttgtga 37303524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 43169642 - 43169681
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  43169642 agagtagtgatatttgaacaaccatttcatacaacttttg 43169681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 482
Target Start/End: Original strand, 3730953 - 3730995
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||    
T  3730953 ataagagtagtgatattttaacgaccatttgagacaacgtttg 3730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 482
Target Start/End: Original strand, 32687844 - 32687886
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||    
T  32687844 ataagagtaatgatatttgaacaactatttgatacaacttttg 32687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 485
Target Start/End: Complemental strand, 44695191 - 44695153
Alignment:
Q  447 tagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  44695191 tagtgatatttgaacaaccatttcatacaacttttgtga 44695153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 481
Target Start/End: Complemental strand, 46953132 - 46953094
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  46953132 agagtagtgatatttgaacaactatttgatacaactttt 46953094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 485
Target Start/End: Complemental strand, 49131033 - 49130995
Alignment:
Q  447 tagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  49131033 tagtgatatttgaacatccatttgagacaatttttgtga 49130995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 479
Target Start/End: Original strand, 9099466 - 9099503
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaactt 479  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  9099466 aagagtagtgttatttgaacaaccatatgagacaactt 9099503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 19418049 - 19418090
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||| |||||||||||||| ||||||||||||||| ||||||    
T  19418049 gagtggtgatatttgaacatccatttgagacaactcttgtga 19418090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 28269987 - 28269950
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  28269987 agtagtgttatttgaacaaccatatgagacaacttttg 28269950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 33007543 - 33007502
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| ||||||||||||||| |||||||| ||||||||    
T  33007543 gagtagtgttatttgaacaaccatatgagacaatttttgtga 33007502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 37302963 - 37303004
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| ||||||||||| ||| |||||||||||||||||    
T  37302963 gagtagtgttatttgaacaagcatatgagacaacttttgtga 37303004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 41957695 - 41957654
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||| ||||||||||| | |||||||||||||    
T  41957695 gagtagtgatatttaaacaaccattttaaacaacttttgtga 41957654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 108614 - 108574
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||| |||| | ||||||||||    
T  108614 aagagtagtgatatttgaacaactatttcatacaacttttg 108574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 485
Target Start/End: Original strand, 37215129 - 37215161
Alignment:
Q  453 tatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||| |||||||||||||||||    
T  37215129 tatttgaacaaccatatgagacaacttttgtga 37215161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 51650541 - 51650501
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||| ||||||||||||||||||||| | ||||||||||    
T  51650541 aagagtggtgatatttgaacaaccatttcatacaacttttg 51650501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 20719902 - 20719945
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  20719902 aagagtagtgatatttgaacatccatttgagacaacttttgtga 20719945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 11767876 - 11767917
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  11767876 taagagtagtgatatttgaacaaccattttagacaacttttg 11767917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 24431507 - 24431548
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  24431507 gagtagtgatatttgaacaaccatttgagacaactattgtga 24431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 2117527 - 2117570
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  2117527 aagagtagtgatatttgaacaactatttgatacaacttttgtga 2117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 9403697 - 9403654
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  9403697 aagagtagtgatatttaaacaaccatttgatacaacttttgtga 9403654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 440 - 479
Target Start/End: Original strand, 21575712 - 21575751
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaactt 479  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  21575712 ataagagtaatgatatttgaacaaccatttgagacaactt 21575751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 33567126 - 33567169
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  33567126 aagagtagtgatatatgaacaaccatttgatacaacttttgtga 33567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 17990397 - 17990355
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  17990397 agagtagtgatatttaaacaaccgtttgagacaacttttgtga 17990355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 27392590 - 27392632
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  27392590 agagtagtgttatttgaacaaccatatgagacaacttttgtga 27392632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 481
Target Start/End: Original strand, 40566104 - 40566142
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  40566104 agagtagtgatatttgaacatccatttgagacaactttt 40566142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 125273 - 125236
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  125273 agtagtgatatttgaacaaccatttgatacaacttttg 125236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 481
Target Start/End: Complemental strand, 33393745 - 33393704
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  33393745 ataagagtagtgttatttgaacaaccatatgagacaactttt 33393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 39595456 - 39595415
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  39595456 gagtaatgatatttgaacaaccatttgatacaacttttgtga 39595415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 12349966 - 12349926
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  12349966 agtagtgatatttgaacaactatttgatacaacttttgtga 12349926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 19127308 - 19127268
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  19127308 aagagtagtgatatttgaacaaccattttaaacaacttttg 19127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Complemental strand, 11306879 - 11306840
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  11306879 agagtagtgatatttgaacaactatttgatacaacttttg 11306840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 33243628 - 33243671
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||    
T  33243628 aagagtaatgatatttgaacaaccatttcagataacttttgtga 33243671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 482
Target Start/End: Complemental strand, 3141678 - 3141640
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  3141678 gagtagtgatatttgaacaaccatttcatacaacttttg 3141640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 1274354 - 1274399
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| | ||||||||||||||||||||  ||||||||||||||    
T  1274354 ataagagaaatgatatttgaacaaccatttttgacaacttttgtga 1274399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 9714024 - 9714065
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  9714024 gagtagtgatatttgaacaaccatatgatacaactcttgtga 9714065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 18638725 - 18638766
Alignment:
Q  439 gataagagtagtgatatttgaacaaccatttgagacaacttt 480  Q
    ||||||||||||||||| || ||||||||||| |||||||||    
T  18638725 gataagagtagtgatatatgtacaaccatttgggacaacttt 18638766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 478
Target Start/End: Original strand, 6515326 - 6515362
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaact 478  Q
    |||||||||||||||||||||||||||| | ||||||    
T  6515326 aagagtagtgatatttgaacaaccatttcatacaact 6515362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 485
Target Start/End: Original strand, 18660756 - 18660800
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||    
T  18660756 taagagaaatgatatttgaacaaccatttttgacaacttttgtga 18660800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 479
Target Start/End: Complemental strand, 35124865 - 35124829
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactt 479  Q
    |||||||||||||||||||||| || |||||||||||    
T  35124865 agagtagtgatatttgaacaactatatgagacaactt 35124829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 31275329 - 31275287
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  31275329 agagtagtgatatttgaacaaccatttgatacaacttttgtga 31275287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 1033338 - 1033289
Alignment:
Q  436 aatgataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  1033338 aatgacaagagtagtgatatttgaacaaccattttaaacaacttttgtga 1033289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 5234360 - 5234401
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  5234360 gagtagtgatatttgaacaaccatttgatacaacttttgtga 5234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 11063974 - 11064019
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  11063974 ataagagtagtgatatttgaacaaccatttaagacaactttggtga 11064019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 25523081 - 25523126
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||    
T  25523081 ataagagtagtgttatttgaacaaccatatgagacaacttttgtga 25523126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 482
Target Start/End: Original strand, 39241189 - 39241229
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  39241189 aagagtagtgatattttaacaaccatttgagacaacttttg 39241229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 485
Target Start/End: Original strand, 42915097 - 42915149
Alignment:
Q  433 attaatgataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||| | ||||||||||||||||||||||| |||||| |||||||||||||    
T  42915097 attaataaaaagagtagtgatatttgaacaactatttgatacaacttttgtga 42915149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 47998777 - 47998734
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  47998777 aagagtagtgatatttgaacaatcatttgatacaacttttgtga 47998734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 55927168 - 55927125
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  55927168 aagagtagtgatatttgaacatccatttgagacaatttttgtga 55927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 51389499 - 51389457
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  51389499 agagcagtgatatttgaacaaccatttgatacaacttttgtga 51389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 442 - 479
Target Start/End: Original strand, 3624349 - 3624386
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaactt 479  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  3624349 aagagcagtgatatttgaacaaccatttgagacaactt 3624386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 4896385 - 4896430
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||    
T  4896385 ataagagtagtgatatttgaacatctatttgaaacaacttttgtga 4896430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 15596578 - 15596537
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  15596578 gagtagtgatatttgaacaaccattttaaacaacttttgtga 15596537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 16004216 - 16004257
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  16004216 gagtagtgatatttgaacatccatttgagacaactcttgtga 16004257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 28480427 - 28480468
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  28480427 gagtagtgatatttgaacaactatttgagacaactattgtga 28480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 28481301 - 28481342
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  28481301 gagtagtgatatttgaacaactatttgagacaactattgtga 28481342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 28482176 - 28482217
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  28482176 gagtagtgatatttgaacaactatttgagacaactattgtga 28482217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 31240834 - 31240793
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  31240834 taagagtagtgatatttgaacaaccatttcatacaacttttg 31240793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 485
Target Start/End: Original strand, 5123480 - 5123520
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  5123480 agtagtgttatttgaacaaccatatgagacaacttttgtga 5123520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 36792517 - 36792477
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  36792517 aagagtagtgatatttgaacaaccatttcatacaacttttg 36792477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 22257084 - 22257123
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  22257084 agagtagtgatatttgaacaaccatttcatacaacttttg 22257123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 24772855 - 24772812
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||    
T  24772855 aagagtggtgatatttgaacatccatttgagacaactcttgtga 24772812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 25476805 - 25476762
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||    
T  25476805 aagagtaatgatatttgaacatccatttgagacaacttctgtga 25476762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 31658103 - 31658060
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||    
T  31658103 aagagtagcgatatttgaacaaccatttgatacagcttttgtga 31658060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 36408091 - 36408134
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||| |||||||||||||||| |||||| |||||||||||||    
T  36408091 aagagtggtgatatttgaacaactatttgatacaacttttgtga 36408134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 36413214 - 36413257
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||| |||||||||||||||| |||||| |||||||||||||    
T  36413214 aagagtggtgatatttgaacaactatttgatacaacttttgtga 36413257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 46173721 - 46173678
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||    
T  46173721 aagagtaatgatatttgaataaccatttgatacaacttttgtga 46173678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 51717171 - 51717214
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||    
T  51717171 aagagtagtgatatttgaacaatcatatgagacaacttatgtga 51717214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 1580171 - 1580208
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||||||||||||||| | |||||||||    
T  1580171 gagtagtgatatttgaacaaccatttcatacaactttt 1580208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 3287000 - 3286959
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||| ||||||||||||||||||||| | |||||||||||||    
T  3287000 gagtggtgatatttgaacaaccatttcacacaacttttgtga 3286959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 480
Target Start/End: Complemental strand, 19315077 - 19315040
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttt 480  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  19315077 agagtagtgatatttgtacaaccatttgtgacaacttt 19315040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 38844379 - 38844420
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||| || ||||||||||||||| |||||||||||||||||    
T  38844379 gagtaatgttatttgaacaaccatatgagacaacttttgtga 38844420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 51296066 - 51296107
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| | |||||| |||||||||||||    
T  51296066 gagtagtgatatttgaacatctatttgaaacaacttttgtga 51296107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 53583017 - 53583058
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||| || ||||||||||||||| |||||||||||||||||    
T  53583017 gagtactgttatttgaacaaccatatgagacaacttttgtga 53583058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 481
Target Start/End: Original strand, 41119424 - 41119464
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    ||||||||||| ||||||||||||||  |||||||||||||    
T  41119424 taagagtagtgttatttgaacaaccaaatgagacaactttt 41119464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Original strand, 51039004 - 51039044
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  51039004 aagagtagtgatatttaaacaaccatttcatacaacttttg 51039044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 485
Target Start/End: Complemental strand, 43403970 - 43403925
Alignment:
Q  440 ataagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  43403970 ataagagtagtgatatttgaacaactatttgagacaactttcgtga 43403925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 481
Target Start/End: Original strand, 40413249 - 40413289
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  40413249 taagagtagtgatatttgaacaaccatttgatacaactttt 40413289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 14029130 - 14029169
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  14029130 agagtagtgatattttaacaaccatttgagacaacttttg 14029169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 23258216 - 23258173
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||||||| |||| ||||||||    
T  23258216 aagagtagtgatatttgaacaaccatttgaaacaatttttgtga 23258173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 482
Target Start/End: Original strand, 21648819 - 21648857
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21648819 gagtagtgatattttaacaaccatttgagacaacttttg 21648857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 40102205 - 40102164
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  40102205 gagtagtgttatttgaacaaccatatgagacaacttttgtga 40102164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 482
Target Start/End: Original strand, 30925541 - 30925581
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  30925541 aagagtagtgatatttgaacaaccattttatacaacttttg 30925581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 478
Target Start/End: Original strand, 41344556 - 41344592
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaact 478  Q
    ||||||||||||||||||||| |||||||||||||||    
T  41344556 aagagtagtgatatttgaacatccatttgagacaact 41344592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 154474 - 154431
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||||| || |||||||| ||||||    
T  154474 aagagtagtgatatttgaacaaccaattaagacaactattgtga 154431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 295730 - 295687
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||| |||||||||||| |||||||| |||||||||||    
T  295730 aagagtagtgttatttgaacaactatttgagataacttttgtga 295687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 1370183 - 1370222
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  1370183 agagtagtgatatttgaacatccatttgagacaatttttg 1370222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 11223747 - 11223786
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  11223747 agagtagtgatatttgaacaatcttttgagacaacttttg 11223786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Complemental strand, 24946182 - 24946143
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  24946182 agagcagtgatatttgaacaaccattttagacaacttttg 24946143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 39719129 - 39719168
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  39719129 agagtagtgatattttaacaaccatttgagacaatttttg 39719168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 44103950 - 44103907
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||    
T  44103950 aagagtagtgatatttgaacaaccatttaagataactattgtga 44103907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Complemental strand, 45101579 - 45101540
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  45101579 agagtagtgatatttgaacaaccatttcatacaacttttg 45101540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 482
Target Start/End: Complemental strand, 3650296 - 3650258
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  3650296 gagtagtgatattttaacaaccatttgagataacttttg 3650258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 21273598 - 21273640
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||| |||| | |||||||||||||    
T  21273598 agagtagtgatatttgaacaactatttcatacaacttttgtga 21273640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 40842107 - 40842073
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaac 477  Q
    ||||||||||||||||||||||||||||| |||||    
T  40842107 agagtagtgatatttgaacaaccatttgatacaac 40842073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 5359520 - 5359479
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| | |||||| |||||||||||||    
T  5359520 gagtagtgatatttgaacatctatttgaaacaacttttgtga 5359479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 7325895 - 7325858
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  7325895 agtagtgatatttgaacaaccattttagataacttttg 7325858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 9046960 - 9047001
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| |||||| |||| ||||||||    
T  9046960 gagtagtgatatttgaacaactatttgatacaatttttgtga 9047001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 15200415 - 15200452
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  15200415 gagtaatgatatttgaacaaccatttgagataactttt 15200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 42543366 - 42543407
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||| |||||||||||||| | ||||||||||    
T  42543366 taagagtagtgataattgaacaaccatttcatacaacttttg 42543407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 485
Target Start/End: Complemental strand, 20284884 - 20284848
Alignment:
Q  450 tgatatttgaacaaccatttga-gacaacttttgtga 485  Q
    |||||||||||||||||||||| ||||||||||||||    
T  20284884 tgatatttgaacaaccatttgatgacaacttttgtga 20284848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 485
Target Start/End: Complemental strand, 21071513 - 21071477
Alignment:
Q  450 tgatatttgaacaaccatttga-gacaacttttgtga 485  Q
    |||||||||||||||||||||| ||||||||||||||    
T  21071513 tgatatttgaacaaccatttgatgacaacttttgtga 21071477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 32175140 - 32175100
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||| |||||||||||||||||||| | ||||||||||    
T  32175140 aagagtaatgatatttgaacaaccatttcatacaacttttg 32175100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 34474135 - 34474095
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||| |||||||||||||||||||| | ||||||||||    
T  34474135 aagagtaatgatatttgaacaaccatttcatacaacttttg 34474095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 42157154 - 42157190
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttt 480  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  42157154 gagtattgatatttgaacaaccatttgagataacttt 42157190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 30733191 - 30733150
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  30733191 gagtagtgatatttaaacaaccatttgagacaacttttgtga 30733150  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 2241713 - 2241756
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  2241713 aagaatagtgatatttgaacaaccatttgatacaacttttgtga 2241756  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 441 - 484
Target Start/End: Complemental strand, 17457620 - 17457577
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtg 484  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  17457620 taagagtagtgatatttgaacaatcaattgagacaacttttgtg 17457577  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 482
Target Start/End: Original strand, 26378273 - 26378312
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  26378273 agagtagtgatatttgaacaaccattttagacaacttttg 26378312  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 30714857 - 30714814
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  30714857 aagagtagtgatatttgaacaatcatttgagataacttttgtga 30714814  T

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Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 481
Target Start/End: Original strand, 34021059 - 34021098
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  34021059 aagagtagtgatatttgaacatccatttgagacaactttt 34021098  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 24752412 - 24752375
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  24752412 agtagtgatatttgaacaaccattttagacaacttttg 24752375  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 1897870 - 1897827
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| | |||||| |||||||||||||    
T  1897870 aagagtagtgatatttgaacatctatttgaaacaacttttgtga 1897827  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 16336957 - 16337000
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||    
T  16336957 aagagtaatgatatttgaacatccatttgagacaactcttgtga 16337000  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 32253965 - 32253922
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||||| |||||  |||||||||||||    
T  32253965 aagagtagtgatatttgaacaactatttggtacaacttttgtga 32253922  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 483
Target Start/End: Complemental strand, 2340579 - 2340541
Alignment:
Q  445 agtagtgatatttgaacaaccatttgagacaacttttgt 483  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  2340579 agtagtgatatttaaacaatcatttgagacaacttttgt 2340541  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 28004967 - 28005009
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||| || ||| ||||||||||||||||||||    
T  28004967 agagtagtgatatttaaataactatttgagacaacttttgtga 28005009  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 479
Target Start/End: Complemental strand, 25554417 - 25554380
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaactt 479  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  25554417 aagagtagtgatatttgaacaaccatttttgacaactt 25554380  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 32853033 - 32853074
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||||| |||||| |||| ||||||||    
T  32853033 gagtagtgatatttgaacaactatttgatacaatttttgtga 32853074  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 479
Target Start/End: Complemental strand, 2163862 - 2163826
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactt 479  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  2163862 agagtagtgatattttaacaatcatttgagacaactt 2163826  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 479
Target Start/End: Complemental strand, 2175495 - 2175459
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactt 479  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  2175495 agagtagtgatattttaacaatcatttgagacaactt 2175459  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 9954733 - 9954693
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  9954733 aagaggagtgatatttgaacaaccatttaatacaacttttg 9954693  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 478
Target Start/End: Original strand, 30906550 - 30906586
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaact 478  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  30906550 aagagtagtgatatttgaacatccatttgaaacaact 30906586  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 481
Target Start/End: Complemental strand, 36186 - 36147
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  36186 aagagtagtgatatttgaacaaccatttgatacaactttt 36147  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 482
Target Start/End: Original strand, 11423 - 11463
Alignment:
Q  442 aagagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  11423 aagagtagtgatatttgaacaactattttagacaacttttg 11463  T

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Target: scaffold0115 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 485
Target Start/End: Original strand, 15075 - 15119
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||||||||||||||||||||||| |||||  |||||||||||||    
T  15075 taagagtagtgatatttgaacaactatttggtacaacttttgtga 15119  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 481
Target Start/End: Complemental strand, 18188 - 18148
Alignment:
Q  441 taagagtagtgatatttgaacaaccatttgagacaactttt 481  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  18188 taagagtagtgatatttgaacaactatttgatacaactttt 18148  T

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Target: scaffold0060 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 482
Target Start/End: Complemental strand, 6999 - 6961
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttg 482  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  6999 gagtagtgatatttgaacaaccattttatacaacttttg 6961  T

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Target: scaffold0501 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 485
Target Start/End: Original strand, 10409 - 10446
Alignment:
Q  448 agtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  10409 agtgttatttgaacaaccatatgagacaacttttgtga 10446  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 39061 - 39020
Alignment:
Q  444 gagtagtgatatttgaacaaccatttgagacaacttttgtga 485  Q
    ||||||||||||||||||| | |||||| |||||||||||||    
T  39061 gagtagtgatatttgaacatctatttgaaacaacttttgtga 39020  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 479
Target Start/End: Original strand, 18547 - 18583
Alignment:
Q  443 agagtagtgatatttgaacaaccatttgagacaactt 479  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  18547 agagtagtgatattttaacaatcatttgagacaactt 18583  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 469
Target Start/End: Complemental strand, 396047 - 396019
Alignment:
Q  441 taagagtagtgatatttgaacaaccattt 469  Q
    |||||||||||||||||||||||||||||    
T  396047 taagagtagtgatatttgaacaaccattt 396019  T

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