View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4505-Insertion-6 (Length: 463)
Name: NF4505-Insertion-6
Description: NF4505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4505-Insertion-6 |
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Alignment Details
Target: chr7 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 8 - 412
Target Start/End: Original strand, 40618778 - 40619182
Alignment:
| Q |
8 |
tatagtagttagaaaactagtgcttggaaatggtgcgtctataaaagaagttgaaacgccatagcaagattttggagcagtacggtggaattcccttcaa |
107 |
Q |
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| T |
40618778 |
tatagtagttagaaaactagtgcttggaaatggtgcgtctataaaagaagttgaaacgccatagcaagattttggagcagtacggtggaattcccttcaa |
40618877 |
T |
|
| Q |
108 |
cttagcctcatcttctagaactacttgcttcacgaacttgattgaattctaggataaccacaaaagaagtagcctcataattaggacaaaatagcaacaa |
207 |
Q |
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| T |
40618878 |
cttagcctcatcttctagaactacttgcttcacgaacttgattgaattctaggataaccacaaaagaagtagcctcataattaggacaaaatagcaacaa |
40618977 |
T |
|
| Q |
208 |
agctcttagctataaaaaatattcattcaaagttaaaataaaagtgacattgttgatgagtatattttgtcactctgcatttatgtggactaagatttct |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
40618978 |
agctcttagctataaaaaatattcattcaaagttaaaataaaagtgacattgttgatgagtatattttgtcactttgcatttatgtggactaagatttct |
40619077 |
T |
|
| Q |
308 |
aattaagatataactaaagtaggctctatcttggagtaaaaggaagccaaatgcattatcacatatcatagacattatgcggagtagaaaacactacata |
407 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40619078 |
aattaagatataactaaagtaggttctatcttggagtaaaaggaagccaaatgcattatcacatatcatagacattatgcggagtagaaaacactacata |
40619177 |
T |
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| Q |
408 |
cttag |
412 |
Q |
| |
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||||| |
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| T |
40619178 |
cttag |
40619182 |
T |
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