View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4505-Insertion-8 (Length: 337)
Name: NF4505-Insertion-8
Description: NF4505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4505-Insertion-8 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 42759841 - 42759628
Alignment:
| Q |
8 |
tattgaactttcgttttgaaaaccaacacatctatccatctgtaatcctctttttcccatgcatattaacacaatcatgcaccttattccctctgtatat |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
42759841 |
tattgaactttcgttttgaaaaccaacacatctatccatctgtaatcctctttttcccatgcatattaacacaatcatgcactttattccctctgtatat |
42759742 |
T |
|
| Q |
108 |
atatacatgcctgactgtttgcattttactcatctgtttctaaactttcttcaatcttagcagttaaacttggtgtgcatggagctgtgatttgctggag |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42759741 |
atatacatgcctgactgtttgcattttactcatctgtttctaaactttcttcaatcttagcagttaaacttggtgtgcatggagctgtgatttgctggag |
42759642 |
T |
|
| Q |
208 |
ttaatttgatggtc |
221 |
Q |
| |
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|||||||||||||| |
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| T |
42759641 |
ttaatttgatggtc |
42759628 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 1402007 - 1402208
Alignment:
| Q |
8 |
tattgaactttcgttttgaaaaccaacacatctatccatctgtaatcctctttttcccatgcatattaacacaatcatgcaccttattccctctgtatat |
107 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1402007 |
tattgaactttcgttttgaaaaccaacacatctatccatatgtaatcctctttttcccatgcatattaacacaatcatgcaccttattccctctgtatat |
1402106 |
T |
|
| Q |
108 |
atatacatgcctgactgtttgcattttactcatctgtttctaaactttcttcaatcttagcagttaaacttggtgtgcatggagctgtgatttgctggag |
207 |
Q |
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||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1402107 |
atacacatgcctgactgtttccgttttactcatctgtttctaaactttcttcaatcttagcagttaaacttggtgtgcatggagctgtgatttgctggag |
1402206 |
T |
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| Q |
208 |
tt |
209 |
Q |
| |
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|| |
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|
| T |
1402207 |
tt |
1402208 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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