View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4505_high_7 (Length: 342)
Name: NF4505_high_7
Description: NF4505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4505_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 11 - 323
Target Start/End: Complemental strand, 29403872 - 29403560
Alignment:
| Q |
11 |
gaacctgtgtcaaattttatgtgcttgcaaaaagggggaaatgttcttataaactgagtttggctctaaaataaacaagtccatctaagactgatttgaa |
110 |
Q |
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| T |
29403872 |
gaacctgtgtcaaattttatgtgcttgcaaaatgggggaaatgttcttataaactgagtttggctctaaaataaacaagtccatctaagactgatttgaa |
29403773 |
T |
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| Q |
111 |
atgtattgtaatttcatctcactataatattaatgtagatattcctttgcttactttagatgcaaactcactttagaggtattttttatacagaaggtga |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29403772 |
atgtattgtaatttcatctcactataatattaatgtagatattcctttgcttactttagatgcaaactcactttagaggtattttttatacagaaggtga |
29403673 |
T |
|
| Q |
211 |
gaagttaaaatgaaggccacggtttttggtgaaaacttccatggtatctctttctctatacatctccattgctatatataggccacacattcctttacat |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
29403672 |
gaagttaaaatgaaggccacggtttttggtgaaaacttccatggtatctctttctctatacatctccattgctatatataggccacatattcctttacat |
29403573 |
T |
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| Q |
311 |
catcacactcttc |
323 |
Q |
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||||||||||||| |
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| T |
29403572 |
catcacactcttc |
29403560 |
T |
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