View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4505_low_15 (Length: 231)
Name: NF4505_low_15
Description: NF4505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4505_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 44846597 - 44846797
Alignment:
| Q |
1 |
atgatcaatagagtaagaaaccaatgttcaaatttatcaaagataaggtccggcagaaaaataaattttgggagcaataaggcactgttcaaagcataca |
100 |
Q |
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| T |
44846597 |
atgatcaatagagtaagaaaccaatgttcaaatttatcaaagataaggtccggcagaaaaataaattttgggagcaataaggcactgttcaaagcataca |
44846696 |
T |
|
| Q |
101 |
gggaagttatatttgagcttgatgtaaaggcggttgttgagaacttcaataaactatgttctgatttatcgtacttcaatcatgtcattagagattgtag |
200 |
Q |
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| T |
44846697 |
gggaagttatatttgagc-----------gcggttgttgagaacttcaataaactatgttctgatttatcgtacttcaatcatgtcattagagattgtag |
44846785 |
T |
|
| Q |
201 |
tttttgttgtcc |
212 |
Q |
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|| ||||||||| |
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| T |
44846786 |
ttcttgttgtcc |
44846797 |
T |
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