View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4506_low_1 (Length: 476)

Name: NF4506_low_1
Description: NF4506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4506_low_1
NF4506_low_1
[»] chr7 (44 HSPs)
chr7 (49-252)||(14805764-14805965)
chr7 (49-252)||(15252758-15252959)
chr7 (122-252)||(25737692-25737822)
chr7 (152-252)||(35923247-35923347)
chr7 (152-252)||(45485950-45486050)
chr7 (152-252)||(46760322-46760422)
chr7 (119-244)||(19912842-19912967)
chr7 (49-252)||(18102423-18102625)
chr7 (157-252)||(25944576-25944671)
chr7 (157-252)||(20123745-20123840)
chr7 (158-252)||(4910698-4910792)
chr7 (157-252)||(6191045-6191140)
chr7 (157-249)||(22632089-22632181)
chr7 (157-249)||(47779604-47779696)
chr7 (157-252)||(47557666-47557761)
chr7 (161-252)||(9158094-9158184)
chr7 (157-248)||(44682878-44682968)
chr7 (157-252)||(2610633-2610728)
chr7 (157-249)||(14574564-14574656)
chr7 (157-247)||(15995719-15995809)
chr7 (159-249)||(16917474-16917563)
chr7 (178-252)||(31549968-31550042)
chr7 (157-249)||(11780018-11780109)
chr7 (164-252)||(24151647-24151734)
chr7 (157-248)||(27810804-27810895)
chr7 (119-194)||(12633110-12633185)
chr7 (159-248)||(48413723-48413809)
chr7 (191-252)||(12632409-12632470)
chr7 (163-248)||(39170540-39170625)
chr7 (152-248)||(4237784-4237880)
chr7 (175-248)||(8015742-8015813)
chr7 (163-252)||(38260322-38260411)
chr7 (204-252)||(4069050-4069098)
chr7 (212-252)||(35068914-35068954)
chr7 (157-191)||(35068961-35068995)
chr7 (157-201)||(4068975-4069020)
chr7 (162-247)||(21654150-21654235)
chr7 (163-252)||(31769027-31769116)
chr7 (162-247)||(35084130-35084215)
chr7 (163-252)||(35888034-35888123)
chr7 (164-240)||(19492472-19492548)
chr7 (164-244)||(22369233-22369313)
chr7 (164-252)||(29713196-29713284)
chr7 (162-190)||(41890328-41890356)
[»] chr5 (39 HSPs)
chr5 (48-252)||(11261950-11262152)
chr5 (152-252)||(6686379-6686479)
chr5 (120-252)||(43590028-43590160)
chr5 (119-252)||(37562828-37562961)
chr5 (157-252)||(20644014-20644109)
chr5 (163-252)||(37522655-37522744)
chr5 (157-252)||(32111002-32111097)
chr5 (157-252)||(32017704-32017798)
chr5 (157-252)||(38130182-38130277)
chr5 (157-252)||(38280847-38280942)
chr5 (157-248)||(42273649-42273738)
chr5 (158-249)||(4463361-4463452)
chr5 (157-252)||(20039102-20039197)
chr5 (157-249)||(9957488-9957577)
chr5 (157-249)||(19413141-19413233)
chr5 (157-252)||(34425331-34425425)
chr5 (157-249)||(25840864-25840956)
chr5 (157-252)||(8225463-8225557)
chr5 (157-247)||(17351388-17351478)
chr5 (157-247)||(39505304-39505393)
chr5 (163-252)||(12912360-12912449)
chr5 (158-249)||(42104317-42104408)
chr5 (157-252)||(43454389-43454484)
chr5 (163-252)||(10153994-10154083)
chr5 (157-252)||(104280-104383)
chr5 (163-252)||(5369097-5369186)
chr5 (159-252)||(41625577-41625669)
chr5 (157-249)||(7071238-7071330)
chr5 (157-227)||(5984206-5984276)
chr5 (157-195)||(12730103-12730141)
chr5 (191-252)||(12792843-12792903)
chr5 (162-247)||(24439575-24439660)
chr5 (163-252)||(3463881-3463970)
chr5 (191-252)||(12729941-12730001)
chr5 (157-190)||(12792929-12792962)
chr5 (163-252)||(5659586-5659676)
chr5 (191-252)||(23233445-23233506)
chr5 (224-252)||(8959707-8959735)
chr5 (162-190)||(17825326-17825354)
[»] chr4 (52 HSPs)
chr4 (122-252)||(47867842-47867972)
chr4 (157-252)||(20281589-20281684)
chr4 (157-252)||(29203504-29203599)
chr4 (119-252)||(2229207-2229340)
chr4 (119-252)||(14332719-14332853)
chr4 (157-252)||(4058713-4058808)
chr4 (157-252)||(20716178-20716273)
chr4 (157-252)||(26916323-26916418)
chr4 (159-252)||(56318129-56318222)
chr4 (157-252)||(55580667-55580763)
chr4 (157-252)||(10069695-10069790)
chr4 (157-252)||(17794600-17794695)
chr4 (158-247)||(35529671-35529760)
chr4 (157-252)||(5483337-5483432)
chr4 (157-248)||(39078155-39078246)
chr4 (157-247)||(35310806-35310896)
chr4 (175-252)||(7654633-7654710)
chr4 (157-252)||(28669060-28669154)
chr4 (161-252)||(41414670-41414760)
chr4 (175-252)||(16604905-16604982)
chr4 (159-248)||(24940365-24940454)
chr4 (157-242)||(52535654-52535739)
chr4 (157-247)||(42915527-42915618)
chr4 (157-247)||(1585411-1585501)
chr4 (157-249)||(48793690-48793780)
chr4 (157-247)||(25297286-25297376)
chr4 (163-252)||(5841838-5841927)
chr4 (164-248)||(5815474-5815558)
chr4 (157-244)||(8683373-8683458)
chr4 (163-252)||(46070581-46070668)
chr4 (163-248)||(8178302-8178387)
chr4 (164-241)||(50080521-50080598)
chr4 (197-252)||(17186854-17186909)
chr4 (164-249)||(19351851-19351938)
chr4 (159-249)||(50145736-50145826)
chr4 (163-252)||(23978174-23978263)
chr4 (159-249)||(32323324-32323413)
chr4 (168-249)||(17799196-17799277)
chr4 (163-252)||(47516250-47516339)
chr4 (157-249)||(14583727-14583818)
chr4 (164-252)||(40553774-40553862)
chr4 (163-250)||(5064716-5064803)
chr4 (159-247)||(12002704-12002787)
chr4 (165-220)||(32203226-32203281)
chr4 (162-247)||(30011991-30012074)
chr4 (164-244)||(31280204-31280280)
chr4 (163-252)||(8013148-8013237)
chr4 (223-252)||(28318476-28318505)
chr4 (157-194)||(32280104-32280141)
chr4 (223-252)||(49080321-49080350)
chr4 (224-252)||(29511490-29511518)
chr4 (204-244)||(32280070-32280110)
[»] chr2 (43 HSPs)
chr2 (119-252)||(41528218-41528351)
chr2 (48-252)||(6110264-6110468)
chr2 (119-252)||(28599213-28599347)
chr2 (157-252)||(3201326-3201421)
chr2 (152-246)||(35517118-35517212)
chr2 (157-252)||(45085257-45085352)
chr2 (157-252)||(19264099-19264195)
chr2 (157-252)||(45660365-45660460)
chr2 (157-252)||(28858309-28858404)
chr2 (157-252)||(33198696-33198791)
chr2 (157-249)||(29524109-29524201)
chr2 (159-249)||(40584466-40584556)
chr2 (159-252)||(11617026-11617119)
chr2 (157-249)||(8701602-8701694)
chr2 (157-249)||(25572046-25572137)
chr2 (157-252)||(6765998-6766094)
chr2 (157-252)||(14873962-14874058)
chr2 (157-252)||(33677483-33677578)
chr2 (166-246)||(5963210-5963290)
chr2 (157-252)||(12938242-12938337)
chr2 (157-252)||(24204594-24204689)
chr2 (157-249)||(9864787-9864877)
chr2 (157-249)||(7645295-7645390)
chr2 (157-248)||(30830665-30830756)
chr2 (164-239)||(39696877-39696952)
chr2 (182-232)||(5280592-5280642)
chr2 (157-252)||(35022897-35022994)
chr2 (178-252)||(35115869-35115943)
chr2 (163-252)||(26998323-26998412)
chr2 (161-248)||(30421251-30421338)
chr2 (170-252)||(9709526-9709608)
chr2 (157-230)||(44454991-44455064)
chr2 (157-249)||(4707421-4707513)
chr2 (163-252)||(8032733-8032823)
chr2 (163-252)||(32010108-32010197)
chr2 (163-252)||(32273677-32273766)
chr2 (204-249)||(40808787-40808832)
chr2 (163-250)||(38071002-38071088)
chr2 (163-221)||(11031019-11031077)
chr2 (163-248)||(44442137-44442222)
chr2 (224-252)||(16494991-16495019)
chr2 (224-252)||(43415468-43415496)
chr2 (387-438)||(45132956-45133008)
[»] chr1 (71 HSPs)
chr1 (45-252)||(12449033-12449238)
chr1 (157-252)||(2126038-2126133)
chr1 (119-246)||(24190432-24190558)
chr1 (48-252)||(32624071-32624274)
chr1 (119-252)||(39555652-39555785)
chr1 (157-252)||(15959706-15959801)
chr1 (157-248)||(6785456-6785547)
chr1 (160-249)||(28120824-28120913)
chr1 (152-252)||(35691387-35691488)
chr1 (161-252)||(42965881-42965971)
chr1 (157-252)||(45226138-45226233)
chr1 (157-252)||(47600105-47600200)
chr1 (157-246)||(33369553-33369640)
chr1 (157-248)||(6786838-6786929)
chr1 (157-248)||(32983241-32983331)
chr1 (157-248)||(40718678-40718769)
chr1 (161-252)||(13136619-13136708)
chr1 (157-252)||(43667369-43667462)
chr1 (157-252)||(47014557-47014651)
chr1 (157-249)||(16854140-16854232)
chr1 (157-252)||(28016812-28016905)
chr1 (157-252)||(3875083-3875182)
chr1 (157-250)||(7468031-7468124)
chr1 (164-249)||(24728696-24728781)
chr1 (157-249)||(3076295-3076387)
chr1 (157-252)||(1820415-1820509)
chr1 (157-252)||(6787056-6787150)
chr1 (157-248)||(39932642-39932733)
chr1 (157-249)||(10558825-10558917)
chr1 (157-252)||(46542984-46543077)
chr1 (169-252)||(7876008-7876091)
chr1 (157-252)||(50369958-50370056)
chr1 (163-252)||(5858437-5858526)
chr1 (164-249)||(37735452-37735537)
chr1 (157-241)||(23392243-23392326)
chr1 (157-252)||(33431561-33431654)
chr1 (157-252)||(2246080-2246175)
chr1 (157-252)||(46818568-46818663)
chr1 (157-249)||(44148905-44148993)
chr1 (163-252)||(5950445-5950534)
chr1 (161-252)||(50012595-50012685)
chr1 (161-247)||(3861766-3861850)
chr1 (163-252)||(7397712-7397801)
chr1 (163-252)||(16688142-16688231)
chr1 (204-252)||(11241074-11241122)
chr1 (164-252)||(43765301-43765389)
chr1 (157-252)||(47302972-47303067)
chr1 (171-237)||(14086966-14087030)
chr1 (157-244)||(25391684-25391769)
chr1 (175-249)||(298738-298812)
chr1 (163-252)||(37538815-37538904)
chr1 (165-245)||(47026655-47026736)
chr1 (191-249)||(32318629-32318687)
chr1 (163-252)||(41063747-41063836)
chr1 (163-252)||(45840132-45840220)
chr1 (163-252)||(8889763-8889845)
chr1 (178-241)||(32742279-32742342)
chr1 (163-242)||(34102049-34102127)
chr1 (163-252)||(15912204-15912293)
chr1 (163-252)||(35366269-35366358)
chr1 (163-252)||(44510285-44510374)
chr1 (204-249)||(52984980-52985025)
chr1 (164-248)||(42724101-42724185)
chr1 (157-209)||(50665263-50665315)
chr1 (164-252)||(52841511-52841599)
chr1 (380-430)||(42226094-42226144)
chr1 (223-252)||(13351746-13351775)
chr1 (163-252)||(25185370-25185459)
chr1 (204-249)||(30221772-30221817)
chr1 (163-236)||(39151242-39151315)
chr1 (163-207)||(43359696-43359740)
[»] scaffold0300 (1 HSPs)
scaffold0300 (120-252)||(639-771)
[»] chr6 (17 HSPs)
chr6 (46-252)||(21542309-21542513)
chr6 (120-252)||(34177707-34177839)
chr6 (152-252)||(11082311-11082411)
chr6 (119-252)||(35129120-35129254)
chr6 (152-252)||(3095785-3095885)
chr6 (157-249)||(7274944-7275036)
chr6 (157-252)||(12461495-12461590)
chr6 (157-252)||(30794258-30794353)
chr6 (157-231)||(9428770-9428844)
chr6 (168-244)||(17751818-17751894)
chr6 (161-244)||(31107195-31107277)
chr6 (163-249)||(4031991-4032077)
chr6 (163-252)||(4987947-4988036)
chr6 (167-252)||(16013498-16013583)
chr6 (163-252)||(16524384-16524472)
chr6 (217-252)||(5300666-5300701)
chr6 (163-252)||(3888431-3888520)
[»] chr8 (45 HSPs)
chr8 (119-252)||(7022470-7022603)
chr8 (157-252)||(34890241-34890336)
chr8 (157-252)||(36190770-36190865)
chr8 (119-252)||(7858488-7858621)
chr8 (152-252)||(26483525-26483625)
chr8 (157-252)||(31734113-31734208)
chr8 (163-252)||(8711881-8711970)
chr8 (159-252)||(34158358-34158451)
chr8 (158-250)||(3642039-3642130)
chr8 (157-248)||(7499724-7499816)
chr8 (157-241)||(24892836-24892920)
chr8 (157-252)||(13143762-13143857)
chr8 (157-252)||(28348609-28348703)
chr8 (157-245)||(8107692-8107779)
chr8 (119-247)||(41086458-41086586)
chr8 (157-252)||(43216414-43216509)
chr8 (157-252)||(15957978-15958075)
chr8 (167-250)||(30575904-30575987)
chr8 (157-252)||(35456091-35456186)
chr8 (157-244)||(4046969-4047056)
chr8 (175-250)||(35525603-35525678)
chr8 (157-249)||(2052834-2052924)
chr8 (157-249)||(29920338-29920430)
chr8 (163-252)||(17713227-17713316)
chr8 (157-249)||(8709856-8709946)
chr8 (164-249)||(16879462-16879547)
chr8 (163-252)||(26954459-26954548)
chr8 (157-227)||(15824723-15824793)
chr8 (163-252)||(2628231-2628320)
chr8 (163-248)||(8673385-8673470)
chr8 (163-252)||(25195113-25195202)
chr8 (205-252)||(13144013-13144060)
chr8 (190-252)||(16358178-16358240)
chr8 (163-252)||(8745587-8745676)
chr8 (159-244)||(41755926-41756010)
chr8 (159-199)||(13144081-13144121)
chr8 (163-252)||(17336746-17336835)
chr8 (163-252)||(41362374-41362463)
chr8 (164-252)||(5217397-5217485)
chr8 (168-232)||(7670749-7670813)
chr8 (163-247)||(27819663-27819747)
chr8 (165-244)||(38072169-38072248)
chr8 (163-248)||(4038952-4039037)
chr8 (163-220)||(14576244-14576301)
chr8 (204-249)||(28497208-28497253)
[»] chr3 (69 HSPs)
chr3 (152-252)||(37042442-37042542)
chr3 (121-252)||(23311618-23311749)
chr3 (157-252)||(579163-579258)
chr3 (157-252)||(14752233-14752328)
chr3 (119-252)||(11054337-11054466)
chr3 (157-252)||(6438087-6438182)
chr3 (157-248)||(28875410-28875501)
chr3 (157-252)||(50651062-50651157)
chr3 (157-252)||(54464920-54465015)
chr3 (157-250)||(6075085-6075178)
chr3 (152-252)||(30189569-30189670)
chr3 (49-252)||(36546440-36546641)
chr3 (49-252)||(36561674-36561875)
chr3 (157-252)||(47864195-47864290)
chr3 (157-248)||(7866512-7866603)
chr3 (158-248)||(34722634-34722724)
chr3 (159-252)||(46711683-46711775)
chr3 (157-252)||(35963156-35963251)
chr3 (157-252)||(37074962-37075059)
chr3 (157-252)||(8703113-8703206)
chr3 (157-252)||(9055000-9055093)
chr3 (157-252)||(53270237-53270334)
chr3 (157-249)||(2927293-2927385)
chr3 (159-247)||(6752676-6752764)
chr3 (157-241)||(46557237-46557321)
chr3 (157-252)||(20847293-20847388)
chr3 (161-248)||(32619859-32619946)
chr3 (157-247)||(26208018-26208108)
chr3 (163-252)||(34194892-34194981)
chr3 (164-249)||(47866941-47867026)
chr3 (157-249)||(3972279-3972371)
chr3 (157-249)||(3997507-3997599)
chr3 (159-252)||(29235199-29235286)
chr3 (163-252)||(8097043-8097132)
chr3 (157-222)||(33974614-33974679)
chr3 (157-252)||(19464079-19464174)
chr3 (157-248)||(26725020-26725111)
chr3 (157-252)||(50730113-50730207)
chr3 (157-252)||(50782647-50782741)
chr3 (170-252)||(16033012-16033094)
chr3 (164-242)||(38674881-38674959)
chr3 (163-252)||(7886642-7886731)
chr3 (163-252)||(30454750-30454838)
chr3 (206-252)||(23910538-23910584)
chr3 (163-252)||(46918238-46918327)
chr3 (157-209)||(48802548-48802600)
chr3 (157-247)||(47115853-47115943)
chr3 (163-252)||(10114915-10115004)
chr3 (163-252)||(10252015-10252104)
chr3 (163-252)||(22479079-22479168)
chr3 (157-252)||(41476361-41476449)
chr3 (158-193)||(34722564-34722599)
chr3 (163-252)||(10014273-10014362)
chr3 (163-252)||(21214245-21214334)
chr3 (163-252)||(22456033-22456122)
chr3 (163-252)||(38401384-38401473)
chr3 (162-247)||(51426621-51426706)
chr3 (212-248)||(9264610-9264646)
chr3 (163-250)||(2994446-2994532)
chr3 (157-216)||(9264012-9264071)
chr3 (157-192)||(23910580-23910615)
chr3 (217-252)||(54725635-54725670)
chr3 (204-249)||(3084208-3084253)
chr3 (157-194)||(8769644-8769681)
chr3 (212-249)||(31292664-31292701)
chr3 (163-248)||(47444002-47444087)
chr3 (163-252)||(48291826-48291915)
chr3 (204-252)||(30612222-30612270)
chr3 (204-252)||(31836970-31837018)
[»] scaffold0045 (1 HSPs)
scaffold0045 (119-252)||(77919-78052)
[»] scaffold0774 (1 HSPs)
scaffold0774 (157-252)||(3494-3589)
[»] scaffold0442 (1 HSPs)
scaffold0442 (157-252)||(10045-10140)
[»] scaffold0018 (1 HSPs)
scaffold0018 (157-252)||(154861-154956)
[»] scaffold0009 (2 HSPs)
scaffold0009 (157-246)||(157794-157883)
scaffold0009 (159-244)||(52676-52761)
[»] scaffold0062 (1 HSPs)
scaffold0062 (157-240)||(44849-44932)
[»] scaffold0132 (2 HSPs)
scaffold0132 (157-252)||(1012-1107)
scaffold0132 (157-252)||(8972-9067)
[»] scaffold0111 (1 HSPs)
scaffold0111 (157-252)||(40179-40274)
[»] scaffold0012 (1 HSPs)
scaffold0012 (164-249)||(160257-160342)
[»] scaffold0565 (1 HSPs)
scaffold0565 (163-252)||(5941-6030)
[»] scaffold0010 (1 HSPs)
scaffold0010 (184-252)||(160985-161053)
[»] scaffold0005 (1 HSPs)
scaffold0005 (157-249)||(233557-233648)
[»] scaffold1786 (1 HSPs)
scaffold1786 (204-252)||(894-942)


Alignment Details
Target: chr7 (Bit Score: 105; Significance: 3e-52; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 14805764 - 14805965
Alignment:
Q  49 tactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnnn 148  Q
    |||||||||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||||||||||         
T  14805764 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaacagacaaacttttatcttttccaagatttttt 14805861  T
Q  149 nnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
       |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14805862 tttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 14805961  T
Q  249 ctat 252  Q
    ||||    
T  14805962 ctat 14805965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 15252758 - 15252959
Alignment:
Q  49 tactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnnn 148  Q
    |||||||||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||||||||||         
T  15252758 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaacagacaaacttttatcttttccaagatttttt 15252855  T
Q  149 nnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
       |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15252856 tttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 15252955  T
Q  249 ctat 252  Q
    ||||    
T  15252956 ctat 15252959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 25737822 - 25737692
Alignment:
Q  122 aaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaata 221  Q
    ||||||||||||||||||||||        |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25737822 aaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaata 25737723  T
Q  222 gccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||||    
T  25737722 gccaatgaaaattgtttttacatcttcctat 25737692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 35923247 - 35923347
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  35923247 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttcta 35923346  T
Q  252 t 252  Q
    |    
T  35923347 t 35923347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 45485950 - 45486050
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45485950 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttccta 45486049  T
Q  252 t 252  Q
    |    
T  45486050 t 45486050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 46760422 - 46760322
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46760422 gttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 46760323  T
Q  252 t 252  Q
    |    
T  46760322 t 46760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 19912967 - 19912842
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||||||||||        |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19912967 gacaaacttttatcttttccaagatttttttttgttattctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataacca 19912868  T
Q  219 atagccaatgaaaattgtttttacat 244  Q
    ||| ||||||||||||||||||||||    
T  19912867 ataaccaatgaaaattgtttttacat 19912842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 18102423 - 18102625
Alignment:
Q  49 tactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnnn 148  Q
    |||||||||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||| ||||||         
T  18102423 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaaaagacaaacttttatctttttcaagatttttt 18102520  T
Q  149 nnngtt-actctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
       ||| | |||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  18102521 tttgtttattctcataaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 18102620  T
Q  248 cctat 252  Q
    |||||    
T  18102621 cctat 18102625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 25944576 - 25944671
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25944576 tctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 25944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 20123840 - 20123745
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  20123840 tctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctat 20123745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 4910792 - 4910698
Alignment:
Q  158 ctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  4910792 ctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctat 4910698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 6191045 - 6191140
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| |||||||||| |||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6191045 tctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6191140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 22632089 - 22632181
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  22632089 tctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcc 22632181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 47779604 - 47779696
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||    
T  47779604 tctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcc 47779696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 47557761 - 47557666
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| |||||||||||||||||||| |||||||| | |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  47557761 tctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcctat 47557666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 9158094 - 9158184
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||| ||| | | |||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  9158094 ataaaattaaatgcaaattacattcaaatttttttctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcctat 9158184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 44682878 - 44682968
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||| ||||||| |||||||||||| ||||||||| | |||||| ||| | ||||||||||||| |||||||||||||||||||||||||    
T  44682878 tctcatgaaattaattgcaaattacatccaattttctatatctttcatttct-ccataaccaatagtcaatgaaaattgtttttacatcttc 44682968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 2610728 - 2610633
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctt-tctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||| |||||||||||||||||||| |||| |||| | |||| |||||||||||||||||| ||||| |||||||||||||| ||||    
T  2610728 tctcatgaaattaagtgcaaattacattcaatttt-tcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttctat 2610633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 14574564 - 14574656
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||||||||||||||||| | ||||||||| || |||| | |||| | |||||||||||| ||||| ||||| ||||||||||||||    
T  14574564 tctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcc 14574656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 15995719 - 15995809
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||||||||| | ||||||||| || |||| | |||| | ||||||||||| |||||| ||||| ||||||||||||    
T  15995719 tctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctt 15995809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 16917474 - 16917563
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| |||||||||||||||||| ||||||||||||| | || || ||||  ||||||||||||  |||||||||||||||||||||||||    
T  16917474 tcattaaattaaatgcaaattactttcaattttctctat-ttcccattttcacataaccaatagttaatgaaaattgtttttacatcttcc 16917563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 31550042 - 31549968
Alignment:
Q  178 ttacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||| |||||  ||||||| ||||||||||| | |||||||| ||||||||||||||||||||    
T  31550042 ttacattcaattttctttttctcccctttttcccataaccaattgtcaatgaaagttgtttttacatcttcctat 31549968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 11780018 - 11780109
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||||||||||||||||||||  ||||||||||||||| | |||| | |||||  ||||| ||||| ||||| ||||||||||||||    
T  11780018 tctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatg-aaattatttttacatcttcc 11780109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 24151734 - 24151647
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||| |||||||||||| |||| |||||| |||| || ||||||||||  || ||||||||||||||||||||||||||    
T  24151734 aaattacatgcaaagtacattcaatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctat 24151647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 27810895 - 27810804
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||| |||||||||||||||||||||||||||||  | |||| | |||| |  |||| ||||| ||||| ||||||||||||||||||||    
T  27810895 tctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttc 27810804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 12633185 - 12633110
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctc 194  Q
    |||||||||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||||    
T  12633185 gacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 48413723 - 48413809
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||| ||||||||||||||||| ||||||||||||||  |||   |||| |||||||||||||| ||||||||||||||||| |||||||    
T  48413723 tcatgaaattaaatgcaaatta-attcaattttctct--cttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttc 48413809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 12632470 - 12632409
Alignment:
Q  191 tctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| |||||  ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  12632470 tctctctcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctat 12632409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 39170540 - 39170625
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||| | |||||||||| || | |||||| |||| || |||| ||||  | ||||||||||||||||||||||||    
T  39170540 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttc 39170625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 4237880 - 4237784
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||| ||| |||||||||||||||||||| |||||||| | | | |||| | |||| | | ||| ||||||||||| |||||| |||||||||||||    
T  4237880 gttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatcttc 4237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 8015813 - 8015742
Alignment:
Q  175 aaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||| |||||||||||||||  ||| | ||||||| |||| ||||| ||||| ||||||||||||||||||||    
T  8015813 aaattgcattcaattttctct--cttgcattttttctataatcaataaccaataaaaattgtttttacatcttc 8015742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 38260322 - 38260411
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||| ||||| |||| |||||| |||| || ||||  |||| |||||||||||| |||||||| ||| ||||    
T  38260322 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctat 38260411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 4069050 - 4069098
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  4069050 ttttctccataaccaataaccaatgaaaattctttttacatctttctat 4069098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 35068954 - 35068914
Alignment:
Q  212 ataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  35068954 ataaccaatagctaattaaaattgtttttacatcttcctat 35068914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 35068995 - 35068961
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaatttt 191  Q
    |||||||| ||||||||||||||||||||||||||    
T  35068995 tctcataatattaaatgcaaattacattcaatttt 35068961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 4068975 - 4069020
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaa-ttttctctttcttt 201  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4068975 tctcatgaaattaaatacaaattacattcaatttttctctttcttt 4069020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 21654235 - 21654150
Alignment:
Q  162 taaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||||||||||||||  |||   |||| |||| |||||||    || ||||||| |||| ||||||||||||    
T  21654235 taaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattatttttacatctt 21654150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 31769116 - 31769027
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| ||||   |||  |||| || |||| |||    |||||||||||||||||||||||||||||    
T  31769116 aaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttcctat 31769027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 35084215 - 35084130
Alignment:
Q  162 taaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||| |||| |||||  |||   |||| |||| ||||||| || || ||||| | |||||||||||||||||    
T  35084215 taaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctt 35084130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 35888123 - 35888034
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| ||||||||| | |||||||||| |||| | |||  |||| || |||| |||   | ||||||||||||||||||||||||||||    
T  35888123 aaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctat 35888034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 19492548 - 19492472
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgttttt 240  Q
    ||||||||| ||||||| |||||||||||| | ||||   |||| ||||||||||| || | || ||||||||||||    
T  19492548 aaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgttttt 19492472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 22369233 - 22369313
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    ||||||||||||| || |||||| | | |||| |||||| |||| || ||||| |||| ||||| |||||| |||||||||    
T  22369233 aaattaaatgcaatttgcattcattatgctctctctttcattttgtctataactaataaccaataaaaattatttttacat 22369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 29713196 - 29713284
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| ||| | | | | || |||||| |||| || ||||  |||| ||||||||||||||||||||| ||| ||||    
T  29713196 aaattaaatgcaaattatatttattataccctctctttcattttctctataattaatatccaatgaaaattgtttttacaactttctat 29713284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 41890356 - 41890328
Alignment:
Q  162 taaaattaaatgcaaattacattcaattt 190  Q
    |||||||||||||||||||||||||||||    
T  41890356 taaaattaaatgcaaattacattcaattt 41890328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 11262152 - 11261950
Alignment:
Q  48 atactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnn 147  Q
    ||||||||||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||||||||||        
T  11262152 atactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agtaaaaaagacaaacttttatcttttccaagattttt 11262055  T
Q  148 nnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
         ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11262054 tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 11261955  T
Q  248 cctat 252  Q
    |||||    
T  11261954 cctat 11261950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 6686379 - 6686479
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6686379 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 6686478  T
Q  252 t 252  Q
    |    
T  6686479 t 6686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 43590160 - 43590028
Alignment:
Q  120 acaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaa 219  Q
    ||||||||||||||||| ||||||        |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43590160 acaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa 43590061  T
Q  220 tagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||| |||||    
T  43590060 tagccaatgaaaattgtttttacatctccctat 43590028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 37562961 - 37562828
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    ||||||||||||||||||||| |||         ||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||    
T  37562961 gacaaacttttatcttttccatgattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaaca 37562862  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| ||||||||||||||||||||||||||||    
T  37562861 atagctaatgaaaattgtttttacatcttcctat 37562828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 20644014 - 20644109
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20644014 tctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20644109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 37522744 - 37522655
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37522744 aaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctat 37522655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 32111002 - 32111097
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  32111002 tctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctat 32111097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 32017704 - 32017798
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  32017704 tctcataaaattaaatgcaaattacattcaactttctctctctttcgtttt-tccataaccaatagacaatgaaaattgtttttacatcttcctat 32017798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 38130277 - 38130182
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  38130277 tctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctat 38130182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 38280847 - 38280942
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  38280847 tctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctat 38280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 42273649 - 42273738
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  42273649 tctcataaaattaaatgcaaattgcattcaattttctct--ctttcattttctccataaccaatagccaatgaaaattgtttttacatcttc 42273738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 4463361 - 4463452
Alignment:
Q  158 ctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||| ||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  4463361 ctcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcc 4463452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 20039102 - 20039197
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  20039102 tctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctat 20039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 9957577 - 9957488
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  9957577 tctcataaaattaaatgcaaattacattcaactttctct--ctttcattttttc-ataaccaatagccaatgaaaattgtttttacatcttcc 9957488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 19413141 - 19413233
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| ||||||| || |||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19413141 tctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcc 19413233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 34425331 - 34425425
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||| |||||||||||||| |||||  |||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  34425331 tctcataaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctat 34425425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 25840864 - 25840956
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||  |||||||||||| |||| | ||||||||||||||||||||||||||    
T  25840864 tctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcc 25840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 8225463 - 8225557
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaa-attgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||||||  || ||||||||| |||||||    
T  8225463 tctcataaaattaaatgcaaattacgttcaattttctc--tctttcattttttccataaccaatagccaatgaaattttttttttacattttcctat 8225557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 17351388 - 17351478
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||| |||||||||| ||||||||||||||||||||| | | || |||| ||||||| ||||||||||| |||||||||||||||||||    
T  17351388 tctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctt 17351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 39505393 - 39505304
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||  ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  39505393 tctcatgaaattaaatgcaaattacatttaattttctctctcttttattttt-ccataacgaattgccaatgaaaattgtttttacatctt 39505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 12912449 - 12912360
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||| ||||| |||| |||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  12912449 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctat 12912360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 42104408 - 42104317
Alignment:
Q  158 ctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||| |||||||||||||| ||||||||||||| ||  |||| | |||| |||||||  ||||||||||||||||||||||||||||||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcc 42104317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 43454484 - 43454389
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||  |||| | | ||||||||||  |||||||||||||||||||| |||||||    
T  43454484 tctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctat 43454389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 10154083 - 10153994
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| || | |||||| |||| || || ||||||| ||||||||||||||||||||||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctat 10153994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 104383 - 104280
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttct--------ttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||||| ||||||||||||||||||| |||        ||| |||||| |||||| |||||| |||||||||||||||||||||||     
T  104383 tctcataaaattaaatgcatattacattcaattttctctctctctctctctttcatttttttcataactaatagctaatgaaaattgtttttacatcttt 104284  T
Q  249 ctat 252  Q
    ||||    
T  104283 ctat 104280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 5369186 - 5369097
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | ||||||||   | || |||||| |||| || |||||||| | ||||||||||||||||||||||||||||||    
T  5369186 aaaattaaatgcaaagtgcattcaataagccctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctat 5369097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 41625669 - 41625577
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| ||||||||| ||||||||||| ||||||| || |||| | ||||||| |||| ||||||| |||||||||  |||||||||||||||||    
T  41625669 tcatgaaattaaattcaaattacatttaattttccctctcttccattttttc-ataatcaatagcgaatgaaaataatttttacatcttcctat 41625577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 7071238 - 7071330
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||| ||||||||||||||||||| |  |||| | |||| ||| ||| |||||| ||||||||||| ||||||||| ||||    
T  7071238 tctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcc 7071330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 5984276 - 5984206
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaat 227  Q
    ||||||||||||||||| |||||||||| ||| |||||| |||||| |||| || |||||||||| |||||    
T  5984276 tctcataaaattaaatgtaaattacattaaatattctctctctttcattttctctataaccaataaccaat 5984206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 12730141 - 12730103
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctct 195  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12730141 tctcataaaattaaatgcaaattacattcaattttctct 12730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 12792903 - 12792843
Alignment:
Q  191 tctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| |||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  12792903 tctctctctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctat 12792843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 24439575 - 24439660
Alignment:
Q  162 taaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||| ||||||||||  |||   |||  ||||||||||||  | |||||||||| |||||||||||||||||    
T  24439575 taaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctt 24439660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 3463970 - 3463881
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||| ||||||||||||| ||||||||||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctat 3463881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 12730001 - 12729941
Alignment:
Q  191 tctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| ||| || |||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  12730001 tctctctctctcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctat 12729941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 12792962 - 12792929
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattt 190  Q
    ||||||||||||||||||||||||||||||||||    
T  12792962 tctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 5659676 - 5659586
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctct-ttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||| ||| | |||||||||| || | || |||| ||||||| |||| |||   ||||| ||||||||||||||||||||||||    
T  5659676 aaaattaaatgtaaagtgcattcaatttgctttcttttttcattttttctataatcaactaccaataaaaattgtttttacatcttcctat 5659586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 23233445 - 23233506
Alignment:
Q  191 tctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| |||||| |||| ||||||||||||||  ||| |||| ||||||||||| |||||||    
T  23233445 tctctctctttcattttctccataaccaatagttaataaaaactgtttttacatattcctat 23233506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 8959707 - 8959735
Alignment:
Q  224 caatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||    
T  8959707 caatgaaaattgtttttacatcttcctat 8959735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 17825354 - 17825326
Alignment:
Q  162 taaaattaaatgcaaattacattcaattt 190  Q
    |||||||||||||||||||||||||||||    
T  17825354 taaaattaaatgcaaattacattcaattt 17825326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 47867842 - 47867972
Alignment:
Q  122 aaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaata 221  Q
    ||||||||||||||| ||||||        |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47867842 aaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaata 47867941  T
Q  222 gccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||||    
T  47867942 gccaatgaaaattgtttttacatcttcctat 47867972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 20281589 - 20281684
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20281589 tctcataaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20281684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 29203504 - 29203599
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29203504 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 29203599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 2229207 - 2229340
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||||||| ||        |||| |||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  2229207 gacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataacca 2229306  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||| ||||||||||||||||||||||||    
T  2229307 atagccaataaaaattgtttttacatcttcctat 2229340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 14332719 - 14332853
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngtt-actctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacc 217  Q
    |||||||||||||||||||||||||        ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  14332719 gacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttcataacc 14332818  T
Q  218 aatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||| |||||| ||||||||||||||||||||||||    
T  14332819 aatggccaataaaaattgtttttacatcttcctat 14332853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 4058713 - 4058808
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4058713 tctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctat 4058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 20716178 - 20716273
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20716178 tctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 20716273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 26916323 - 26916418
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26916323 tctcataaaattaaatgcaaattacattcaattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 26916418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 56318222 - 56318129
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  56318222 tcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcctat 56318129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 55580667 - 55580763
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttcctttt-ttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  55580667 tctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttcctat 55580763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 10069695 - 10069790
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10069695 tctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctat 10069790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 17794695 - 17794600
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17794695 tctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctat 17794600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 35529671 - 35529760
Alignment:
Q  158 ctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  35529671 ctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 5483432 - 5483337
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||||||| ||||||||||||||||||| |||| | |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  5483432 tctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctat 5483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 39078155 - 39078246
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||| ||||||| ||||| |||||||||||||||||||||||||||||||    
T  39078155 tctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatcttc 39078246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 35310896 - 35310806
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||| ||||||||| ||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  35310896 tctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctt 35310806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 7654633 - 7654710
Alignment:
Q  175 aaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctat 7654710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 28669154 - 28669060
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  28669154 tctcataaaattaaatacaaattacattcaattttctctctctttcatttttt-cataactaataaccaatgaaaattgtttttacattttcctat 28669060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 41414760 - 41414670
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  41414760 ataaaattaaatgcaaattacattcaattttttctctctttcatttttt-cataatcaatagccaataaaaattgtttttacatcttcctat 41414670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 16604982 - 16604905
Alignment:
Q  175 aaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctat 16604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 24940365 - 24940454
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||| |||||||||| |||||||||| |||||| |||| ||||||||||||| |||| |||||||||||||||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttc 24940454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 52535739 - 52535654
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttac 242  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||  |||||| ||||||||||||||||||||||| |||||||    
T  52535739 tctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 42915527 - 42915618
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttcctttt-ttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||||||||    
T  42915527 tctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctt 42915618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 1585501 - 1585411
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||||||||| ||||||||||| |||||||    
T  1585501 tctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctt 1585411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 48793780 - 48793690
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| ||||||||||  ||||  |||||| |||||||||| ||||||||||||||||||||||||||||    
T  48793780 tctcatgaaattaaatgcaaattacatttaattttctct--cttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcc 48793690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 25297376 - 25297286
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||| |||||||||| ||||||||||||||||||  | ||||   |||| ||||||| |||||||||||||||||||||||||||||||    
T  25297376 tctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctt 25297286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 5841927 - 5841838
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||| | || ||||||| |||| |||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  5841927 aaaattcaatgcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctat 5841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 5815474 - 5815558
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||  |||||||||||||||||||| |||| | |||||||||||| |||||| |||| |||||| |||||||||||||    
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttc 5815558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 8683458 - 8683373
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    |||||| ||||||||| ||||||||||| ||||||||||  ||||  ||||||||||||||||| ||||||||||||| |||||||||    
T  8683458 tctcatgaaattaaatacaaattacatttaattttctct--cttttattttttccataaccaattgccaatgaaaattatttttacat 8683373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 46070668 - 46070581
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| ||||  ||||| |||| || |||||||| | ||||||||||||||||||||||||||||||    
T  46070668 aaaattaaatgcaaagtgcattcaatttactct--ctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctat 46070581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 8178387 - 8178302
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||| | |||||||||| |||| |||||| |||| || |||||||||| |||||  |||||||||||||||||||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttc 8178302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 50080598 - 50080521
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgttttta 241  Q
    ||||||||||||||||||||||||||||| || |||| | |||| ||||||| ||||||||||| ||||||| |||||    
T  50080598 aaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggtttta 50080521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 17186909 - 17186854
Alignment:
Q  197 tctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  17186909 tctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctat 17186854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 19351851 - 19351938
Alignment:
Q  164 aaattaaatgcaaattacattcaa-ttttctctttctttccttttttccataaccaatagccaatgaaaattgttttt-acatcttcc 249  Q
    |||||||||||||||||||||||| |||||||| | || | || ||| |||||| ||||||||||||||||||||||| |||||||||    
T  19351851 aaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcc 19351938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 50145736 - 50145826
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| ||||||||||  ||||||||| ||||||| || |||| | |||| ||||| | |||||||||||||||||||| ||||||||||||    
T  50145736 tcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcc 50145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 23978263 - 23978174
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  23978263 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 23978174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 32323413 - 32323324
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| |||||||||| ||||||| ||||||||||||| |||| | |||| || |||| |||  | ||||||||||||||||||||||||||    
T  32323413 tcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcc 32323324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 17799277 - 17799196
Alignment:
Q  168 taaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||||| |||| |||||  |||  || || |||| |||||||| |||| |||||||||||||||||||||||||||    
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcc 17799196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 47516339 - 47516250
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||| |||| | ||||  |||| |||| |||||| |||| || |||||||| | |||||||||||||||||||| |||||||||    
T  47516339 aaaattaaatacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctat 47516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 14583727 - 14583818
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||||||||||| || || |||| | |||| |   ||| | |||||||||||||| ||||||||||||||||    
T  14583727 tctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcc 14583818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 40553774 - 40553862
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||| |||||| ||| ||||   ||||  ||| |||||||| |||| ||||||||| ||||||||||||||| ||||    
T  40553774 aaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttacatctttctat 40553862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 250
Target Start/End: Complemental strand, 5064803 - 5064716
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   | ||||||||||||||||||||||||||    
T  5064803 aaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcct 5064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 12002787 - 12002704
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||| ||||||||||||||||||||||||| |      |||| |  ||| |||||||||||| |||||| |||||||||||||||||||    
T  12002787 tcatgaaattaaatgcaaattacattcaatatc-----tcttccagtttctccataaccaatggccaataaaaattgtttttacatctt 12002704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 32203226 - 32203281
Alignment:
Q  165 aattaaatgcaaattacattcaattttctctttctttccttttttccataaccaat 220  Q
    ||||||||| || |||||||||||||||||| | |||| |||||| ||||||||||    
T  32203226 aattaaatgtaatttacattcaattttctctatgtttcatttttttcataaccaat 32203281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 30012074 - 30011991
Alignment:
Q  162 taaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||| ||||||||||  ||||  |||  |||| |||||||  | || ||||||| |||||||||||||||||    
T  30012074 taaaattaaatgcaaattgcattcaatttgttctt--ttttattttctccataataattaaccaatgataattgtttttacatctt 30011991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 31280204 - 31280280
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    ||||||||| |||| | ||||||||||||||| |   ||| ||| |||||||| ||||||||||||||||| |||||||||    
T  31280204 aaattaaatacaaactgcattcaattttctctct---tccatttctccataac-aatagccaatgaaaattatttttacat 31280280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 8013237 - 8013148
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||| || |||||| | |  ||| |||||| |||| || || || |||| ||||| ||||||||||||||||||| ||||    
T  8013237 aaaattaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctat 8013148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 28318505 - 28318476
Alignment:
Q  223 ccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||    
T  28318505 ccaatgaaaattgtttttacatcttcctat 28318476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 32280141 - 32280104
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctc 194  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  32280141 tctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 49080321 - 49080350
Alignment:
Q  223 ccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||    
T  49080321 ccaatgaaaattgtttttacatcttcctat 49080350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 29511490 - 29511518
Alignment:
Q  224 caatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctat 29511518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 32280110 - 32280070
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    |||| ||||||| ||||||||||| ||||||||||||||||    
T  32280110 ttttctccataatcaatagccaattaaaattgtttttacat 32280070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 41528218 - 41528351
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||| ||||||         ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41528218 gacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataacca 41528317  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||    
T  41528318 atagccaatgaaaattgtttttacatcttcctat 41528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 6110468 - 6110264
Alignment:
Q  48 atactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnn 147  Q
    ||||||||||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||||||||||        
T  6110468 atactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaaaagacaaacttttatcttttccaagattttt 6110371  T
Q  148 nnnngttactctcataaaattaaatgcaaattacattcaattttctctttct--ttccttttttccataaccaatagccaatgaaaattgtttttacatc 245  Q
         ||| ||||||||||||||||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  6110370 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 6110271  T
Q  246 ttcctat 252  Q
    |||||||    
T  6110270 ttcctat 6110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 28599347 - 28599213
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngtt-actctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacc 217  Q
    |||||||||||||||||||||||||        ||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  28599347 gacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcatattacattcaattttctctttctttcattttttccataacc 28599248  T
Q  218 aatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| |||||||||||||||||    
T  28599247 aatagccaatgaaaattatttttacatcttcctat 28599213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 3201326 - 3201421
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3201326 tctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 3201421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 35517118 - 35517212
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatct 246  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  35517118 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatct 35517212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 45085257 - 45085352
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  45085257 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctat 45085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 19264099 - 19264195
Alignment:
Q  157 tctcataaaattaaatgcaaa-ttacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19264099 tctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 19264195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 45660365 - 45660460
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45660365 tctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 45660460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 28858309 - 28858404
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||||||| |||||||||||| ||||    
T  28858309 tctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctat 28858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 33198791 - 33198696
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  33198791 tctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctat 33198696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 29524201 - 29524109
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  29524201 tctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcc 29524109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 40584556 - 40584466
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| | |||||||||||||||||||||||||||    
T  40584556 tcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcc 40584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 11617026 - 11617119
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  11617026 tcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctat 11617119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 8701602 - 8701694
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||| |||||| |||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  8701602 tctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcc 8701694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 25572046 - 25572137
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  25572046 tctcatgaaattaaatgcaaattacatttaattttctctctctt-ccatttttccataaccaatatccaatgaaaattgtttttacatcttcc 25572137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 6766094 - 6765998
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttcctttttt-ccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||||| ||||||||||||||||||||| |||| | |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  6766094 tctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttcctat 6765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 14873962 - 14874058
Alignment:
Q  157 tctcataaaattaaa-tgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| ||||||| ||||||||||||| |||||| ||| |||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  14873962 tctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttcctat 14874058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 33677483 - 33677578
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||||||| ||| |||||||||||||| | ||||   |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  33677483 tctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 33677578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 5963210 - 5963290
Alignment:
Q  166 attaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatct 246  Q
    |||||||||||||||||||||||||||||| |||| | |||| | ||||||||||||||||| |||||| |||||||||||    
T  5963210 attaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatct 5963290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 12938242 - 12938337
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||||||||||||||||||  ||| ||| |||||  |||| ||||||| |||||||||||||||||||||||||||  |||||||    
T  12938242 tctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctat 12938337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 24204689 - 24204594
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| | |||||||| |||||| |||||||||||||| |||| | |||| | ||||||||||||||||||||||||| |||||||| |||||||    
T  24204689 tctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctat 24204594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 9864877 - 9864787
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||||||||||||| ||  |||| | |||| ||||||| |||| ||||||||||||||||||||| ||||||    
T  9864877 tctcatgaaattaaatgcaaattacattcaattttatc--tcttccattttctccataatcaattgccaatgaaaattgtttttacctcttcc 9864787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 7645390 - 7645295
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttcttt---ccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||||||||||||||||| |  ||   | |||| |||||||  ||||||||||||||||||||||||||| ||||    
T  7645390 tctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacatgttcc 7645295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 30830756 - 30830665
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||| |||||||||||||||||||| ||||||||||| | |||| |||| || |||| ||||| ||||||||| || |||||| ||||||    
T  30830756 tctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttc 30830665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 39696952 - 39696877
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttt 239  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| || || | ||||||| |||||||||||||||    
T  39696952 aaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 5280642 - 5280592
Alignment:
Q  182 attcaattttctctttctttccttttttccataaccaatagccaatgaaaa 232  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  5280642 attcaattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

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Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 35022897 - 35022994
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaata--gccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||||||||||||  |||||||||||||| |||  | |||| ||| ||| |||||  || ||||||||||||||||||||||||||||    
T  35022897 tctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctat 35022994  T

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Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 35115943 - 35115869
Alignment:
Q  178 ttacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| || |||| | |||| ||||||||||||| | ||||||||||||||||||||||| ||||    
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctat 35115869  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 26998323 - 26998412
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  26998323 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 26998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 30421338 - 30421251
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||  | ||  ||||  | || ||||||||||||||||||||    
T  30421338 ataaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatcttc 30421251  T

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Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 9709526 - 9709608
Alignment:
Q  170 aatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||| ||||||||||  ||| |||||| |||| || |||| ||||| | ||||||||||||||| ||||||||||||    
T  9709526 aatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctat 9709608  T

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Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 44454991 - 44455064
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaa 230  Q
    |||||| ||||||||||||||||||||||||||||  || |||| | |||| || |||| ||||||||||||||    
T  44454991 tctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatgaa 44455064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 4707421 - 4707513
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| |||||||||||| ||||| |||||||| | ||| | || |||||||||| || |  |||| ||||||||||||||||| |||||||||    
T  4707421 tctcgtaaaattaaatgtaaattgcattcaatgtgctcctcctctccttttttctatgatgaataaccaatgaaaattgttttaacatcttcc 4707513  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 8032823 - 8032733
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttc-tttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| || |||| |||| || ||||| |  | ||||| ||||||||||||||||||||||||    
T  8032823 aaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctat 8032733  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 32010108 - 32010197
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||| ||||| |||| | |||| |||| || |||| |||   |||||||||||| |||||||||||||||||    
T  32010108 aaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctat 32010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 32273677 - 32273766
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||| ||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||| ||||||||||    
T  32273677 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctat 32273766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 40808832 - 40808787
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||| |||||||| || |||||||||||||||||||||||||    
T  40808832 ttttttccctaaccaattgctaatgaaaattgtttttacatcttcc 40808787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 38071002 - 38071088
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    ||||||||||| ||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||    
T  38071002 aaaattaaatgtaaagtgcattcaatttgctctat-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcct 38071088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 11031077 - 11031019
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaata 221  Q
    ||||||||||||||| | |||||||||| |||| |||||| |||| || ||||||||||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaata 11031019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 44442137 - 44442222
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||| | |||||||||| || | | |||| |||| || |||| |||    |||||||||||||||||||||||||    
T  44442137 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaattgtttttacatcttc 44442222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 16495019 - 16494991
Alignment:
Q  224 caatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||    
T  16495019 caatgaaaattgtttttacatcttcctat 16494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 43415468 - 43415496
Alignment:
Q  224 caatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||    
T  43415468 caatgaaaattgtttttacatcttcctat 43415496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 45132956 - 45133008
Alignment:
Q  387 attttcgtagttttcaataaaatgtaagggcatcgttggttttt-agcagaaa 438  Q
    ||||| |||||||| |||||||||||||||||  |||||||||| ||||||||    
T  45132956 atttttgtagtttttaataaaatgtaagggcagtgttggtttttcagcagaaa 45133008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 252
Target Start/End: Complemental strand, 12449238 - 12449033
Alignment:
Q  45 cacatactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatc 144  Q
    |||||||||||||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||||||||||     
T  12449238 cacatactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaaaagacaaacttttatcttttccaagatt 12449141  T
Q  145 nnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
            ||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||    
T  12449140 ttttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacat 12449041  T
Q  245 cttcctat 252  Q
    ||||||||    
T  12449040 cttcctat 12449033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 2126038 - 2126133
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2126038 tctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 2126133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 24190432 - 24190558
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||||||||||        |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  24190432 gacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacatt-aattttctctttctttcattttttccataacca 24190530  T
Q  219 atagccaatgaaaattgtttttacatct 246  Q
    ||||||||||||||||||||||||||||    
T  24190531 atagccaatgaaaattgtttttacatct 24190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 32624274 - 32624071
Alignment:
Q  48 atactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnn 147  Q
    ||||||| ||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||||||||||        
T  32624274 atactccatccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaaaagacaaacttttatcttttccaagattttt 32624177  T
Q  148 nnnngtt-actctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatct 246  Q
        ||| | ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  32624176 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatct 32624077  T
Q  247 tcctat 252  Q
    ||||||    
T  32624076 tcctat 32624071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 39555785 - 39555652
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  39555785 gacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaatgttctctctctttcattttttccataacca 39555686  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||| ||||    
T  39555685 atagccaatgaaaattgtttttacatctttctat 39555652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 15959801 - 15959706
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15959801 tctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15959706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 6785456 - 6785547
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6785456 tctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 6785547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 28120913 - 28120824
Alignment:
Q  160 cataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  28120913 cataaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcc 28120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 35691387 - 35691488
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttc-cttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| |||    
T  35691387 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccct 35691486  T
Q  251 at 252  Q
    ||    
T  35691487 at 35691488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 42965971 - 42965881
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42965971 ataaaattaaatgcaaattacattcaattttctctctctttcattttt-ccataaccaatagccaatgaaaattgtttttacatcttcctat 42965881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 45226138 - 45226233
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  45226138 tctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctat 45226233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 47600200 - 47600105
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  47600200 tctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctat 47600105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 33369553 - 33369640
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatct 246  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33369553 tctcataaaattaaatgcaaattacattcaattttctct--ctttcattttttccataaccaatagccaatgaaaattgtttttacatct 33369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 6786838 - 6786929
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  6786838 tctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttc 6786929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 32983331 - 32983241
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  32983331 tctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatcttc 32983241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 40718678 - 40718769
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||| ||||    
T  40718678 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttc 40718769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 13136708 - 13136619
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13136708 ataaaattaaatgcaaattatattcaattttctct--ctttcattttttccataaccaatagccaatggaaattgtttttacatcttcctat 13136619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 43667462 - 43667369
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  43667462 tctcataaaattaaatgtaaattacattcaattttctct--ctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctat 43667369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 47014651 - 47014557
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  47014651 tctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctat 47014557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 16854140 - 16854232
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||| |||| ||||||||||||||||||| ||||||||||||||| |||||    
T  16854140 tctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttcc 16854232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 28016905 - 28016812
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||  ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  28016905 tctcataaaattaaatgcaagttacattcaattttctct--cttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctat 28016812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 3875182 - 3875083
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca----atagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||    ||||||||| |||||||||||||||| |||||||    
T  3875182 tctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatattcctat 3875083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 7468124 - 7468031
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||  | ||| |||||||||||||||||||| |||||||||||||    
T  7468124 tctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttcct 7468031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 24728781 - 24728696
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||||||||||||||||||| |||||||||| |||||  |||||||||||| |||| ||||||||||||||||||||||||||||    
T  24728781 aaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcc 24728696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 3076295 - 3076387
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||||||||||||||| ||||||||||  ||||  ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  3076295 tctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcc 3076387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 1820415 - 1820509
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||| ||| |||||| ||| |||||||||||||||||    
T  1820415 tctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcctat 1820509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 6787150 - 6787056
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| ||||| |||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6787150 tctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctat 6787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 39932733 - 39932642
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||||||||||||| |||||||||||||||||||||| |||||  |||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  39932733 tctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttc 39932642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 10558917 - 10558825
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||| |||||||||| |||||| ||| |||| | |||| ||||||| |||||||||||||||||||||||||||||||||    
T  10558917 tctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcc 10558825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 46542984 - 46543077
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||| |||| ||||||||||  ||||| |||| |||| ||||||||||||||| ||||||||||| |||||||||||    
T  46542984 tctcataaaattaaatgcaaattgcatttaattttctct--ctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcctat 46543077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 7876091 - 7876008
Alignment:
Q  169 aaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||| |||||| |||||||||||| ||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctat 7876008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 50369958 - 50370056
Alignment:
Q  157 tctcataaaattaaatgcaaatta----cattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||| |||||||    ||||||||||||||| |||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  50369958 tctcataaaattaaatacaaattaattacattcaattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatcttcctat 50370056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 5858526 - 5858437
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||||||||||||||||||||||||||||| ||||||||||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctat 5858437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 37735537 - 37735452
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||||||||||||||||||||||||| | || | |||| ||||||| ||||||||||| |||||||||||||| ||||||    
T  37735537 aaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcc 37735452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 23392326 - 23392243
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgttttta 241  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||    
T  23392326 tctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattattttta 23392243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 33431561 - 33431654
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||| |||| ||||||||||| ||||||||||  ||||| |||| || ||||||||||||||||||||||||||||| |||| ||||||    
T  33431561 tctcataaaatgaaatacaaattacatttaattttctct--ctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctat 33431654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 2246175 - 2246080
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |  |||  ||| ||| ||||||||||||||||| ||||||||| |||||||    
T  2246175 tctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctat 2246080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 46818663 - 46818568
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||| |||||||| |||| ||||||||   |||| |||| |||||||| | |||||||||||||||||||||| ||||||||||    
T  46818663 tctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttcctat 46818568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 44148993 - 44148905
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||| || ||||||||||  |||   ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44148993 tctcatgaaattaaatgcaaattacgtttaattttctct--ctta--ttttttccataaccaattgccaatgaaaattgtttttacatcttcc 44148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 5950445 - 5950534
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||| ||| | |||| ||||| |||| |||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  5950445 aaaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctat 5950534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 50012595 - 50012685
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||| | |||||  ||||||| ||||| |||| |||||||||||| |||||| || |||||||    
T  50012595 ataaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaata-ccaatgaaaattatttttatatattcctat 50012685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 3861850 - 3861766
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||||| ||| |||||| |||  ||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  3861850 ataaaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctt 3861766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 7397712 - 7397801
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||||| |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  7397712 aaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctat 7397801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 16688142 - 16688231
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||| ||| | || |||||||| |||| || |||||||| | ||||||||||||||||||||||||||||||    
T  16688142 aaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctat 16688231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 11241074 - 11241122
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11241074 ttttttccataaccaatagccaatgaaaattggttttacatcttcctat 11241122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 43765301 - 43765389
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||||| |||||||||||| | |||| | |||| | |||||| |||| |||||||||| |||||||||||||||||||    
T  43765301 aaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 47303067 - 47302972
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttct-ctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||||||||||||||||||| ||||||  ||| |||| |||| | ||||| ||||||||||||||||||  ||||||||||||||||    
T  47303067 tctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt-attttacatcttcctat 47302972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 14086966 - 14087030
Alignment:
Q  171 atgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtt 237  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||| ||||||||||||||||||||    
T  14086966 atgcaaattacattcaattttctct--cttttattttttccataactaatagccaatgaaaattgtt 14087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 25391684 - 25391769
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    ||||||||||||||||||||||||||||||||||| | | || ||||  || |||||||| | |||||||||||||||||||||||||    
T  25391684 tctcataaaattaaatgcaaattacattcaatttt-tatctc-ttccacttctccataactattagccaatgaaaattgtttttacat 25391769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 298812 - 298738
Alignment:
Q  175 aaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||| ||||||||||||||| | |||| ||||||| ||||||||||| |||||  ||||||||||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcc 298738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 37538815 - 37538904
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||| |||||| | |||||||||| |||  |||||| |||| || |||||||| | |||||||||||||| |||||||||||||||    
T  37538815 aaaattaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctat 37538904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 47026655 - 47026736
Alignment:
Q  165 aattaaatgcaaattacattcaattttctctttctttccttttttccataaccaa-tagccaatgaaaattgtttttacatc 245  Q
    ||||||||||||||||||||||| ||| | | |||||| |||||||| ||||||| ||||||||||||||| ||| ||||||    
T  47026655 aattaaatgcaaattacattcaaatttttttctctttcattttttccttaaccaattagccaatgaaaattatttatacatc 47026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 32318687 - 32318629
Alignment:
Q  191 tctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||| ||| || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  32318687 tctctctctctcattttctccataaccaataaccaatgaaaattgtttttacatcttcc 32318629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 41063747 - 41063836
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | ||||||||||  ||| |||||  |||| || ||||| |||| |||||||||||| |||||||||||| ||||    
T  41063747 aaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctat 41063836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 45840220 - 45840132
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| ||||||| |||| |||   |||||||||||||||||| |||||||||||    
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctat 45840132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 8889845 - 8889763
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||| ||| | ||||||||||||||| |||||| |||| || |||||||||       |||||||||||||||||||||||||    
T  8889845 aaaattaaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaat-------gaaaattgtttttacatcttcctat 8889763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 32742342 - 32742279
Alignment:
Q  178 ttacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgttttta 241  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||    |||||||||||||||||    
T  32742342 ttacatttaattttctctttctttcattttttccataatcaatgattaatgaaaattgttttta 32742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 34102127 - 34102049
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttac 242  Q
    ||||||||||||||| | ||| |||||| |||| ||||||  ||| || |||||||||| ||||||||||||||||||||    
T  34102127 aaaattaaatgcaaagtgcat-caatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 15912204 - 15912293
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| ||||   |||| |||| ||  ||| ||| |  |||||||||||||||||||||||||||||    
T  15912204 aaaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctat 15912293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 35366358 - 35366269
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||| |||| | |||||||||| || | ||| || |||  || |||||||||| ||||| ||||||||||||||||||| ||||    
T  35366358 aaaattaaattcaaagtgcattcaatttgctatctctatcatttgatcaataaccaataaccaattaaaattgtttttacatctttctat 35366269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 44510374 - 44510285
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| ||||   |||| |||| || |||| ||||   |||||||||||||||||||| ||||||||    
T  44510374 aaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctat 44510285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 52984980 - 52985025
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||    
T  52984980 ttttatccctaatcaatagccaatgaaaattgtttttacatcttcc 52985025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 42724101 - 42724185
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||||||||||||| |||| ||||| ||||  || || |||| | |||||| |||| | ||| ||||||||||||||||||||    
T  42724101 aaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttc 42724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 50665263 - 50665315
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttcctttttt 209  Q
    |||||| ||||||| ||||||||||||| |||||||||| |||||| ||||||    
T  50665263 tctcatgaaattaattgcaaattacatttaattttctctctctttcatttttt 50665315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 52841599 - 52841511
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| |||||||| || ||| ||| ||||| ||||| ||||  | ||||| |||| ||||||||||||||||| ||||||| ||||    
T  52841599 aaattaagtgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgttttaacatctttctat 52841511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 42226094 - 42226144
Alignment:
Q  380 caagggcattttcgtagttttcaataaaatgtaagggcatcgttggttttt 430  Q
    ||||| |||||| ||| ||||||||||||||||||||||  ||||||||||    
T  42226094 caaggacatttttgtacttttcaataaaatgtaagggcaatgttggttttt 42226144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 13351746 - 13351775
Alignment:
Q  223 ccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||    
T  13351746 ccaatgaaaattgtttttacatcttcctat 13351775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 25185459 - 25185370
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | ||||||||||  ||| | |||| |||| || |||| |||   ||||||||| ||||||| ||||||||||||    
T  25185459 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctat 25185370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 30221772 - 30221817
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| ||||||||||||| ||||| |||| ||||||||||||||||    
T  30221772 ttttctccataaccaatatccaataaaaaatgtttttacatcttcc 30221817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 39151315 - 39151242
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgt 236  Q
    ||||||||||| ||| | |||||||||| || | |||||| |||| || ||||| |||| ||||||||||||||    
T  39151315 aaaattaaatgtaaagtgcattcaatttgctttatctttcattttatcaataactaataaccaatgaaaattgt 39151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 43359696 - 43359740
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttcctttt 207  Q
    ||||||||||||||| |||||||||||| |||| |||||| ||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttcatttt 43359740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 771 - 639
Alignment:
Q  120 acaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaa 219  Q
    ||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  771 acaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaa 672  T
Q  220 tagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||| |||||    
T  671 tagccaatgaaaattgtttttacatctccctat 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 46 - 252
Target Start/End: Original strand, 21542309 - 21542513
Alignment:
Q  46 acatactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcn 145  Q
    ||||||||||||| |||||||||||||||        |||||||||||||||||||||||||           |||||||||||||||||||||| ||      
T  21542309 acatactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaaaagacaaacttttatcttttccaatattt 21542406  T
Q  146 nnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatc 245  Q
          |||| |||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21542407 ttttttgttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatc 21542506  T
Q  246 ttcctat 252  Q
    |||||||    
T  21542507 ttcctat 21542513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 34177839 - 34177707
Alignment:
Q  120 acaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaa 219  Q
    ||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  34177839 acaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaa 34177740  T
Q  220 tagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||| |||||    
T  34177739 tagccaatgaaaattgtttttacatctccctat 34177707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 11082411 - 11082311
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11082411 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctcccta 11082312  T
Q  252 t 252  Q
    |    
T  11082311 t 11082311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 35129254 - 35129120
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||||||||||        |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35129254 gacaaacttttatcttttccaagatttttttttgttattctcgtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataacca 35129155  T
Q  219 atagccaatgaaaattgttt-ttacatcttcctat 252  Q
    ||| |||||||||||||||| ||||||||||||||    
T  35129154 ataaccaatgaaaattgtttattacatcttcctat 35129120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 3095885 - 3095785
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  3095885 gttattctcataaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttccta 3095786  T
Q  252 t 252  Q
    |    
T  3095785 t 3095785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 7275036 - 7274944
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7275036 tctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcc 7274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 12461590 - 12461495
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||||| |||||||||||||||||||| | ||||   |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12461590 tctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttctat 12461495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 30794353 - 30794258
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| ||||||||||||||||| ||| |||||||||| ||||   |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  30794353 tctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctat 30794258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 9428770 - 9428844
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaa 231  Q
    |||||||||||| ||||||||||| ||| |||||||||| |||||  ||||||| ||||||||||||||||||||    
T  9428770 tctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 17751894 - 17751818
Alignment:
Q  168 taaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    |||||||||||||||||||||||| ||| |||| | |||| ||||||| |||||||||||||  | |||||||||||    
T  17751894 taaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacat 17751818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 31107195 - 31107277
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    ||||||||||||||||||||||||||| ||||| | |||||| ||||||| |||| |||||| |||| |||||  |||||||||    
T  31107195 ataaaattaaatgcaaattacattcaa-tttctttctctttcattttttctataatcaatagtcaataaaaatcatttttacat 31107277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 4031991 - 4032077
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   |||||||||||||||||||||||||||    
T  4031991 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcc 4032077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 4987947 - 4988036
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| ||||   |||| |||| || |||| |||   |||||||||||| |||||||||||||||||    
T  4987947 aaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctat 4988036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 16013583 - 16013498
Alignment:
Q  167 ttaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| ||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 16013498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 16524384 - 16524472
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | ||||||||||  ||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  16524384 aaaattaaatgcaaagtgcattcaatttgttctct-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 16524472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 5300701 - 5300666
Alignment:
Q  217 caatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5300701 caataaccaatgaaaattgtttttacatcttcctat 5300666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 3888431 - 3888520
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | ||||||||||  ||| | |||| |||| || |||| |||   || ||||||||||||| |||||||||||||    
T  3888431 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctat 3888520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 7022603 - 7022470
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||| ||||||        |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7022603 gacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataacca 7022504  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||| |||||| ||||||||||    
T  7022503 atagccaatgaaaattatttttatatcttcctat 7022470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 34890336 - 34890241
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34890336 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 34890241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 36190770 - 36190865
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36190770 tctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 36190865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 7858488 - 7858621
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||||||||||         ||| ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||    
T  7858488 gacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattactttcaattttctctctctttcattttttccataatca 7858587  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    || | |||||||||||||||||||||||||||||    
T  7858588 atggtcaatgaaaattgtttttacatcttcctat 7858621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 26483525 - 26483625
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  26483525 gttattctcgtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctcccta 26483624  T
Q  252 t 252  Q
    |    
T  26483625 t 26483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 31734113 - 31734208
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  31734113 tctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctat 31734208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 8711881 - 8711970
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8711881 aaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcctat 8711970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 34158451 - 34158358
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  34158451 tcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctat 34158358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 3642130 - 3642039
Alignment:
Q  158 ctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 7499724 - 7499816
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttcctttt-ttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  7499724 tctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttc 7499816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 24892836 - 24892920
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgttttta 241  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  24892836 tctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgttttta 24892920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 13143762 - 13143857
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  13143762 tctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctat 13143857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 28348609 - 28348703
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  28348609 tctcataaaattaaatgcaaattacattcaattttctctctcttt-catttttccataaccaatagccaatggaaattgtttttacatattcctat 28348703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 8107779 - 8107692
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatc 245  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||    
T  8107779 tctcataaaattaaatgcaaattacattcaattttctctctcttt-catttatccataaccaatagccaatgaaaattgtttttacatc 8107692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 119 - 247
Target Start/End: Complemental strand, 41086586 - 41086458
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||| ||||||         ||| |||||||||||||||||||||||||||| |||||||||| | |||  |||||||||| ||||    
T  41086586 gacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattgaattttctctctgttttattttttccattacca 41086487  T
Q  219 atagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||||||||||||||    
T  41086486 atagccaatgaaaattgtttttacatctt 41086458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 43216509 - 43216414
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  43216509 tctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctat 43216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 15958075 - 15957978
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttct--ttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||| |||||||||||||||||| | |||||||    
T  15958075 tctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcctat 15957978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 30575987 - 30575904
Alignment:
Q  167 ttaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    ||||||||||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcct 30575904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 35456186 - 35456091
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||  ||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  35456186 tctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctat 35456091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 4047056 - 4046969
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||| ||||||||||||| |||||||||    
T  4047056 tctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacat 4046969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 35525603 - 35525678
Alignment:
Q  175 aaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    |||||||||| |||||||||| |||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcct 35525678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 2052834 - 2052924
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||||||||||||||||  ||||   |||| ||| || ||||||||||||||||||||||||||||||||||    
T  2052834 tctcatgaaattaaatgcaaattacattcaattttctc--tcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcc 2052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 29920430 - 29920338
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||| | ||||||||||||||||| || ||||   |||| ||||||| |||||||||||||||||||||||||||||||||    
T  29920430 tctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcc 29920338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 17713227 - 17713316
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||| | |||| |||| | ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  17713227 aaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctat 17713316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 8709946 - 8709856
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||||||||||||||||||||||||||||||||||||  ||||   |||| ||||||||  |||| ||||||||| ||||||||| ||||||    
T  8709946 tctcataaaattaaatgcaaattacattcaattttctc--tcttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcc 8709856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 16879547 - 16879462
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||  |||||| |||||| |||| |||||||||||||||| ||||    
T  16879547 aaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattcc 16879462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 26954548 - 26954459
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||| ||| || | |||||| |||| || |||||||| | ||||||||||||||||||||||||||||||    
T  26954548 aaaattaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctat 26954459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 15824793 - 15824723
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaat 227  Q
    |||||| |||||||||| |||||||||| |||||||||| |||| | |||||| |||||||||||||||||    
T  15824793 tctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaat 15824723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 2628320 - 2628231
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||| |  ||||||||| |||| |||||| |||| || |||| ||||| |||||||||||| |||||||||||||||||    
T  2628320 aaaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctat 2628231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 8673385 - 8673470
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||| |||||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||    
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttc 8673470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 25195202 - 25195113
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  25195202 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctat 25195113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 13144060 - 13144013
Alignment:
Q  205 tttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  13144060 tttttccataaccaataactaatgaaaattgtttttacatcttcctat 13144013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 16358240 - 16358178
Alignment:
Q  190 ttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||| |||||| ||||| |||||| |||||||||||| ||||||||||||||||    
T  16358240 ttctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctat 16358178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 8745587 - 8745676
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| ||  || ||||| ||||  ||||  ||||||| |||| ||| | ||||||||||||||||||||||||||||||    
T  8745587 aaaattaaatgcaaactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctat 8745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 41755926 - 41756010
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    |||| |||||||||| ||||||||||||||||| ||| ||||| | ||||||||||| |||||  ||||||| ||| |||||||||    
T  41755926 tcatgaaattaaatgtaaattacattcaattttttctctcttt-catttttccataagcaataatcaatgaacattatttttacat 41756010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 13144121 - 13144081
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttct 199  Q
    ||||||||||||||||||||||||||||||||||||| |||    
T  13144121 tcataaaattaaatgcaaattacattcaattttctctctct 13144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 17336746 - 17336835
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| ||||   |||| |||  || |||| |||   ||||||||||||||||||||||||||||||    
T  17336746 aaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctat 17336835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 41362463 - 41362374
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||| ||||| |||  | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  41362463 aaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 41362374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 5217397 - 5217485
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||| || |||||| | | || | |||||| |||| || ||||| |||| ||||| ||||||||||||||||||| ||||    
T  5217397 aaattaaatgcaatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgtttttacatctttctat 5217485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 7670749 - 7670813
Alignment:
Q  168 taaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaa 232  Q
    |||||| ||||||||||||||||||||| | || | |||| |||||||| |||||| ||||||||    
T  7670749 taaatgaaaattacattcaattttctctctattccattttctccataactaatagcaaatgaaaa 7670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 27819663 - 27819747
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    ||||||||||||||| |||||| ||||| ||||  ||||  |||| || ||||||||||  |||| |||| ||||||||||||||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctt 27819747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 38072169 - 38072248
Alignment:
Q  165 aattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    |||||||| |||| | |||||||||| |||||| |||| |||| || |||| |||   ||||||||||||||||||||||    
T  38072169 aattaaatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaattgtttttacat 38072248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 4039037 - 4038952
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||| ||| | |||||||||| |||| | |||| |||| || |||| |||   | ||||||||||||||||||||||||    
T  4039037 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttc 4038952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 14576301 - 14576244
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaat 220  Q
    ||||||||||||||| | |||||||||| |||| |||||| |||| || |||||||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaat 14576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 28497253 - 28497208
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||||| ||||||||||   |||||||||||||||||||||||||    
T  28497253 ttttttcaataaccaataagtaatgaaaattgtttttacatcttcc 28497208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 37042542 - 37042442
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttccta 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  37042542 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttccta 37042443  T
Q  252 t 252  Q
    |    
T  37042442 t 37042442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 23311749 - 23311618
Alignment:
Q  121 caaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaat 220  Q
    |||||||||||||||| ||||||        |||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  23311749 caaacttttatctttttcaagatttttttttgttattctcataaaattaaatgtatattacattcaattttctctttctttcattttttccataaccaat 23311650  T
Q  221 agccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||    
T  23311649 agccaatgaaaattgtttttacatcttcctat 23311618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 579258 - 579163
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  579258 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctat 579163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 14752328 - 14752233
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14752328 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 14752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 11054466 - 11054337
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||||||||||        |||| |||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||    
T  11054466 gacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttcatt----ttttccataacca 11054371  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  11054370 atagccaatgaaaattgtttttaaatcttcctat 11054337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 6438087 - 6438182
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6438087 tctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6438182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 28875410 - 28875501
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  28875410 tctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttc 28875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 50651157 - 50651062
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  50651157 tctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 54465015 - 54464920
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  54465015 tctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctat 54464920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 6075085 - 6075178
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||| |||||||    
T  6075085 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcct 6075178  T

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Target: chr3; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 30189569 - 30189670
Alignment:
Q  152 gttactctcataaaattaaatgcaaattacattcaattttctctttctttcctttt-ttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    |||| |||| |||||||||||| |||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  30189569 gttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcct 30189668  T
Q  251 at 252  Q
    ||    
T  30189669 at 30189670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 36546440 - 36546641
Alignment:
Q  49 tactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnnn 148  Q
    |||||||||| |||||||||||||||        |||||||||||||||||||||||||           ||||||||||| |||||| ||||||         
T  36546440 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaaaagacaaacttttgtctttttcaagattcttt 36546537  T
Q  149 nnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
        ||| |||||||||||||||||||||||||||| |||| ||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  36546538 ttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttc 36546637  T
Q  249 ctat 252  Q
    ||||    
T  36546638 ctat 36546641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 36561875 - 36561674
Alignment:
Q  49 tactccctccatcccataatataagcnnnnnnnncacattttctttgtcccaaaatatatnnnnnnnnnngacaaacttttatcttttccaagatcnnnn 148  Q
    |||||||||| |||||||||||||||        |||||||||||||||||||||||||           ||||||||||| |||||| ||||||         
T  36561875 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatata--agcaaaaaagacaaacttttgtctttttcaagattcttt 36561778  T
Q  149 nnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
        ||| |||||||||||||||||||||||||||| |||| ||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  36561777 ttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttc 36561678  T
Q  249 ctat 252  Q
    ||||    
T  36561677 ctat 36561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 47864195 - 47864290
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  47864195 tctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctat 47864290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 7866603 - 7866512
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  7866603 tctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttc 7866512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 34722724 - 34722634
Alignment:
Q  158 ctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttc 34722634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 46711775 - 46711683
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||| |||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  46711775 tcataaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcctat 46711683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 35963156 - 35963251
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||| |||| ||||||||||||| ||||| |||||||||||| |||||||||||    
T  35963156 tctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctat 35963251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 37074962 - 37075059
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttcttt--ccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||  | ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  37074962 tctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcctat 37075059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 8703113 - 8703206
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||||| | ||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  8703113 tctcataaaattaaatgcaaattacattaaattttctttctcttt-catttttccataatcaatagccaatg-aaattgtttttacatcttcctat 8703206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 9055000 - 9055093
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||||| | ||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  9055000 tctcataaaattaaatgcaaattacattaaattttctttctcttt-catttttccataatcaatagccaatg-aaattgtttttacatcttcctat 9055093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 53270237 - 53270334
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttct--ctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||| ||||||||||||||||||||  || |||||| ||||||||||||||||||| ||||||||||| ||||| |||||| ||||    
T  53270237 tctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttctat 53270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 2927293 - 2927385
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| ||||||||| ||||||||||| |||||||||| ||||   |||||| |||||||||||||||||||||||| ||||||||||||||    
T  2927293 tctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcc 2927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 6752676 - 6752764
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||| ||||||||||||||||||||||| ||| |||| |||| | |||| ||||||||||||||||||| |||||||||||||||||||    
T  6752676 tcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctt 6752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 46557321 - 46557237
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgttttta 241  Q
    |||||| |||||||||| |||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  46557321 tctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 20847388 - 20847293
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||||||||||  || |||||| |||| ||||||| ||||  ||||||||||||||||  ||||||||||||    
T  20847388 tctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctat 20847293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 32619946 - 32619859
Alignment:
Q  161 ataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||||||||||||||||||||||| | |  |  ||| |||||||||||||||||||||||||| |||||||||||||    
T  32619946 ataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttc 32619859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 26208018 - 26208108
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    ||||||||| | |||||| ||||||||||||||||||||||||| | |||| |||| ||  ||||||||||||||||||||||||||||||    
T  26208018 tctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatctt 26208108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 34194892 - 34194981
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||| ||| |||| |||||| |||| || |||||||||| ||||||||||||||||||||||||||||||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctat 34194981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 47867026 - 47866941
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||||||||||||||||||||||||| |||| |  ||| ||||||| ||||||||||||||||| |||||||||| ||||    
T  47867026 aaattaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 47866941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 3972279 - 3972371
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||||||||||||  ||| |||| | |||| | | ||||||||||| |||||||||||||||||||||||||    
T  3972279 tctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcc 3972371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 3997599 - 3997507
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||||||||||||  ||| |||| | |||| | | ||||||||||| |||||||||||||||||||||||||    
T  3997599 tctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcc 3997507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 29235199 - 29235286
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| |||||||||| ||||||||||||||| |||      ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29235199 tcattaaattaaatgtaaattacattcaattctct------ttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 29235286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 8097132 - 8097043
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| |||||| |||| || |||| ||||| |||||||||||| |||||||||||||||||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctat 8097043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 33974679 - 33974614
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatag 222  Q
    |||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||||||    
T  33974679 tctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 19464079 - 19464174
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||| | ||||||||||||||||||| ||| ||| |||||| ||||| ||||||||||||   ||||||||||||||||  ||||||||||    
T  19464079 tctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctat 19464174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 26725111 - 26725020
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    |||||| |||||| |||||||||||||||| |||| ||| ||||   |||| ||||||| ||||| ||||||||||||||||||||||||||    
T  26725111 tctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttc 26725020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 50730113 - 50730207
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| |||||||||||| ||||||||||||||||||||| | |||  ||||||||||||||||||| ||||| |  || |||||||||||||||||    
T  50730113 tctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50730207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 50782741 - 50782647
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| |||||||||||| ||||||||||||||||||||| | |||  ||||||||||||||||||| ||||| |  || |||||||||||||||||    
T  50782741 tctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50782647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 16033094 - 16033012
Alignment:
Q  170 aatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||| | |||||||||| || | |||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctat 16033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 38674881 - 38674959
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttac 242  Q
    ||||||||| ||||||| |||||||||||||| |||||| |||| | ||||| |||||| |||||||||||||||||||    
T  38674881 aaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 7886731 - 7886642
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| ||||||||| | |||||||||| |||| |||||| |||| || ||||| |||| ||||||||||||||||||||||||| ||||    
T  7886731 aaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctat 7886642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 30454838 - 30454750
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| |||||| |||| || |||||||||| ||||| ||||||||||||||||||| ||||    
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctat 30454750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 23910584 - 23910538
Alignment:
Q  206 ttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23910584 ttttccataaccaatagccaatgaaaattatttttacatcttcctat 23910538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 46918327 - 46918238
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||| |||||| | ||||| |||| | || |||||| |||| || |||||||||| ||||||||||||||||||| ||||||||||    
T  46918327 aaaattaagtgcaaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctat 46918238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 48802600 - 48802548
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttcctttttt 209  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  48802600 tctcataaaagtaaatgcaaattacattcaattttctctctctttcatttttt 48802548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 47115853 - 47115943
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||| |||||||||  ||||| |||| |||||||||||| || | |||| ||||||| ||||| |||| |||||||| |||||||||||    
T  47115853 tctcatgaaattaaatataaatttcatttaattttctcttttttccattttatccataatcaataaccaaagaaaattgcttttacatctt 47115943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 10114915 - 10115004
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||| ||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  10114915 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 10115004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 10252015 - 10252104
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||| ||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  10252015 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 10252104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 22479168 - 22479079
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   |||||||||| |||||||||||||||||||    
T  22479168 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctat 22479079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 41476449 - 41476361
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||| |||||||||||| |  ||||| ||||||||        ||||||||||||||| |||||||||||| ||||    
T  41476449 tctcataaaattaaatgcaaattagattcaattttctttccctttcattttttcc-------ctagccaatgaaaattatttttacatctttctat 41476361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 34722564 - 34722599
Alignment:
Q  158 ctcataaaattaaatgcaaattacattcaattttct 193  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 10014273 - 10014362
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||| ||||| | |||||||||| |||| | |||  |||| || |||| |||   ||||||||||||||||||||||||||||||    
T  10014273 aaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctat 10014362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 21214245 - 21214334
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||  |||| || |||| |||   ||||||||||||||||||||||||| ||||    
T  21214245 aaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctat 21214334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 22456122 - 22456033
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||| ||||||||||||| ||||||||||    
T  22456122 aaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctat 22456033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 38401384 - 38401473
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| |||||| |||||||||| | |||| |||| || ||||  ||   |||||||||||| ||||||||||| |||||    
T  38401384 aaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctat 38401473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 51426621 - 51426706
Alignment:
Q  162 taaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatctt 247  Q
    |||||||||||||||||||||||||||||  ||||  |||  |||| |||||||    || |||||||||||| ||||||||||||    
T  51426621 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 51426706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 9264610 - 9264646
Alignment:
Q  212 ataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9264610 ataacgaatagccaatgaaaattgtttttacatcttc 9264646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Complemental strand, 2994532 - 2994446
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcct 250  Q
    ||||||||||||||| | |||||||||| |||| | |||| |||| || |||| |||   ||||||||||||| ||||||||||||||    
T  2994532 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattg-ttttacatcttcct 2994446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 9264012 - 9264071
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataac 216  Q
    |||||||||||||||||||||||||||  |||||| ||| |||||| |||| ||| ||||    
T  9264012 tctcataaaattaaatgcaaattacatctaattttatctctctttcattttctccgtaac 9264071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 23910615 - 23910580
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttc 192  Q
    ||||||| ||||||||||||||||||||||||||||    
T  23910615 tctcatataattaaatgcaaattacattcaattttc 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 54725670 - 54725635
Alignment:
Q  217 caatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||| ||||||||||||||||||||||||||||||    
T  54725670 caataaccaatgaaaattgtttttacatcttcctat 54725635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 3084253 - 3084208
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||| |||||||| |||| |||||||| ||||||||||||||||||    
T  3084253 ttttctccataacaaataaccaatgaatattgtttttacatcttcc 3084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 8769681 - 8769644
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctc 194  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  8769681 tctcattaaattaaatgcaaattacgttcaattttctc 8769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 31292664 - 31292701
Alignment:
Q  212 ataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  31292664 ataacaaataaccaatgaaaattgtttttacatcttcc 31292701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 47444087 - 47444002
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttc 248  Q
    ||||||||||||||| | |||||||||| || | | |||| |||| || |||| |||   ||| ||||||||||||||||||||||    
T  47444087 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatcttc 47444002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 48291826 - 48291915
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||| ||| | |||||||||| |||| | |||| |||||||  ||| |||   |||||||||||| |||||||| ||||||||    
T  48291826 aaaattaaatggaaagtgcattcaatttgctctctttttcattttttctgtaatcaactaccaatgaaaattatttttacaccttcctat 48291915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 30612222 - 30612270
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||| || || ||||||| ||||||||||||||||| ||||    
T  30612222 ttttttccataatcattaaccaatgagaattgtttttacatctttctat 30612270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 31836970 - 31837018
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| |||| ||||||||| ||||||||||||||||| ||| |||||||    
T  31836970 ttttctccacaaccaatagtcaatgaaaattgtttttgcatattcctat 31837018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 77919 - 78052
Alignment:
Q  119 gacaaacttttatcttttccaagatcnnnnnnngttactctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataacca 218  Q
    |||||||||||||||||| ||||||         ||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  77919 gacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgtaaattacattcaattttcactttctttcattttttccataacca 78018  T
Q  219 atagccaatgaaaattgtttttacatcttcctat 252  Q
    || |||||||||||||||||||||||||||||||    
T  78019 atggccaatgaaaattgtttttacatcttcctat 78052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 3589 - 3494
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3589 tctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 3494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 10045 - 10140
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10045 tctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 10140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 154861 - 154956
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  154861 tctcataaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatctttctat 154956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 157794 - 157883
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatct 246  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  157794 tctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatct 157883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 52761 - 52676
Alignment:
Q  159 tcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacat 244  Q
    |||| ||||||||||| ||||||||| |||||||||| ||||   |||| ||||||| |||||| |||||||||||||||||||||    
T  52761 tcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 44932 - 44849
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgttttt 240  Q
    |||| ||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||||||    
T  44932 tctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttt 44849  T

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Target: scaffold0132 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 1012 - 1107
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| |||||||||||| |||||||||  |||||| ||||||||||||||||||  ||||||||| |||||||||||||| ||||    
T  1012 tctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 1107  T

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Target: scaffold0132; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 8972 - 9067
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| |||||||||||| |||||||||  |||||| ||||||||||||||||||  ||||||||| |||||||||||||| ||||    
T  8972 tctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 9067  T

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Target: scaffold0111 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 40179 - 40274
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||||| |||||||||||||||||||||||| ||||||| || | | ||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  40179 tctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttctat 40274  T

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Target: scaffold0012 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 160257 - 160342
Alignment:
Q  164 aaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||||||  |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||    
T  160257 aaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcc 160342  T

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Target: scaffold0565 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 6030 - 5941
Alignment:
Q  163 aaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||||||||||| | |||||||||| |||| | |||| ||||||| |||| |||    ||| |||||||||||||||||||||||||    
T  6030 aaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctat 5941  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 161053 - 160985
Alignment:
Q  184 tcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    ||||||| ||||||||||| |||| || ||||| |||| ||||||||||||||||||||| ||| ||||    
T  161053 tcaatttgctctttctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctat 160985  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 233648 - 233557
Alignment:
Q  157 tctcataaaattaaatgcaaattacattcaattttctctttctttccttttttccataaccaatagccaatgaaaattgtttttacatcttcc 249  Q
    |||||| |||||||||||||||||||||||||| || || |||| | |||| |   ||| | |||||||||||||| ||||||||||||||||    
T  233648 tctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcc 233557  T

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Target: scaffold1786 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 894 - 942
Alignment:
Q  204 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 252  Q
    |||| |||||||||||||| ||||||||||| |||||| ||||| ||||    
T  894 ttttctccataaccaatagtcaatgaaaattatttttatatctttctat 942  T

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