View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4507-Insertion-5 (Length: 394)
Name: NF4507-Insertion-5
Description: NF4507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4507-Insertion-5 |
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Alignment Details
Target: chr4 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 8 - 389
Target Start/End: Complemental strand, 43872274 - 43871893
Alignment:
| Q |
8 |
aataatgctagagaactgtcggaaagaaccaatgaggttaccggtcaatatgctaatgcttgtgttgagatagctaaggaaatgggtgtggcttatatca |
107 |
Q |
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| T |
43872274 |
aataatgctagagaactgtcggaaagaaccaatgaggttaccggtcaatatgctaacacgtgtgttgagatggctaaggaaatgggtgtggcttatatca |
43872175 |
T |
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| Q |
108 |
atctgtggtccaagatgcaagaaacagaaggctggcaaaagaaatttttgtggttagttataacctggacttgacaaacatatgtgacataggtttagcc |
207 |
Q |
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| T |
43872174 |
atctgtggtccaagatgcaagaaacagaaggctggcaaaagaaatttttgtggttagttataacctggacttgacaaacatatgtgacataggtttagcc |
43872075 |
T |
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| Q |
208 |
accttttcttgttgattaaagccaaaaggcatcatggatttaactttgacgacatctggttataatgtgatcctgttattagttaagtgtattcgtttag |
307 |
Q |
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| T |
43872074 |
accttttcttgttgattaaagccaaaaggcatcatggatttaactttgacgacatctggttataatgtgatcctgttattagttaagtgtattcctttag |
43871975 |
T |
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| Q |
308 |
cttctcatgagtctagtttgtgatgcagtaaacagctttcttttaactatatatgaagatttacacgcattttaaatatgaa |
389 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
43871974 |
cttctcatgagtctagtttgtgatgcagtaaacagctttcttttaactatatatgaggatttacacgcattttaaatatgaa |
43871893 |
T |
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