View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4507_low_7 (Length: 249)
Name: NF4507_low_7
Description: NF4507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4507_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 5169177 - 5169420
Alignment:
| Q |
1 |
ccgatgacatcgatccattcatatttcccttaaatattctcactcttccagatgttaccgcacttcatatgctatcactaatctctaatctccgacttcc |
100 |
Q |
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|||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
5169177 |
ccgatggcatcgatccattcatatttcccttaaatattctcgctcttccagatgttaccgcacttcatatgctatcactaatctctaatctctgacttcc |
5169276 |
T |
|
| Q |
101 |
atattacaagtatagacataacttttactatctgttatgttctctttgaattccgaggtgtaatactttaataatatatcatagatatctgcctccactt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5169277 |
atattacaagtatagacataacttttactatctgttatgttctctttgaattccgaggtgtaatactttaataatatatcatagatatctgcctccactt |
5169376 |
T |
|
| Q |
201 |
ctattgcagaattctcgagggttgggtattcttaaaggtctctg |
244 |
Q |
| |
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||||||||||||||| |||||||||||| ||||||||||||||| |
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| T |
5169377 |
ctattgcagaattcttgagggttgggtaatcttaaaggtctctg |
5169420 |
T |
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