View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4509-Insertion-4 (Length: 521)
Name: NF4509-Insertion-4
Description: NF4509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4509-Insertion-4 |
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Alignment Details
Target: chr2 (Bit Score: 412; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 8 - 452
Target Start/End: Complemental strand, 38925638 - 38925194
Alignment:
| Q |
8 |
aaccaatcataagaaaatgcatataattctgatgtcactgacaagtgccccccacgcccaatgtccaccagtcttattaagaatgaaattaattcctaga |
107 |
Q |
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| T |
38925638 |
aaccaatcataagaaaatgcatataattctgatgtcactgacaagtgccccccacgcccaatgtccaccagtcttgttaagaatgaaattaattcctaaa |
38925539 |
T |
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| Q |
108 |
tagaaaaagaaaagggggaaatggtttttgggatgtttactgagtgattatgttatgggaggagaccaaactctattttttgaaaggagacatcaacact |
207 |
Q |
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| T |
38925538 |
tagaaaaagaaaagggggaaatggtttttgggatgtttactgagtgattatgttatgggaggagaccaaactctattttttgaaaggagacatcaacact |
38925439 |
T |
|
| Q |
208 |
ctcaaatttcttatatataatttgtctttctaagattaaatcatctctttcattagtttatactctcttcgatcatatttataacnnnnnnnctactttt |
307 |
Q |
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| T |
38925438 |
ctcaaatttcttatatataatttgtctttctaaaattaaatcatctctttcattagtttatactctcttcgatcatatttataacaaaaaaactactttt |
38925339 |
T |
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| Q |
308 |
taaattcattgaagacttaatgtaaaaaatagttttttatttataaatataaccggagagtatgttaattgtgcaccactattctaataatttttcaact |
407 |
Q |
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| T |
38925338 |
taaattcattgaagacttaatgtaaaaaatagttttttatttataaatataaccggagagtatgttaattgtgcaccactattctaataatttttcaact |
38925239 |
T |
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| Q |
408 |
attttaaattgaacaagtgcttagtgacttcagttattcaactat |
452 |
Q |
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| T |
38925238 |
attttaaattgaacaagtgcttagtgacttcagttattcaactat |
38925194 |
T |
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