View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4509-Insertion-6 (Length: 409)
Name: NF4509-Insertion-6
Description: NF4509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4509-Insertion-6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 10 - 409
Target Start/End: Complemental strand, 26882063 - 26881667
Alignment:
| Q |
10 |
gttatgctatcgtgatactttcgggacaactggttcgatacatgcaacatttttcatattataacaaggcttatgttaacgagtgtttaaaggagatgca |
109 |
Q |
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| T |
26882063 |
gttatgctatcgtgatactttcgggacaacgggttcgatacatgcagcatttttcatattataacaaggctgatgttaacaggtgtttaaaggagatgca |
26881964 |
T |
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| Q |
110 |
tgtacagtgtaaaccatgtttatgtttaaatagttgtccaatcaaaatctatattttgccatttcatattaaatttacacaccagaccgcttgaccacgg |
209 |
Q |
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| T |
26881963 |
tgtacagtgtaaaccatgtttatgtttaaatagttgtccaatcaaaatctatattttgccatttcatattaaatttacacaccagaccgcttgaccacag |
26881864 |
T |
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| Q |
210 |
aagttcactaatctcccttctctggtgattgcttcttctctgtgagttttctttcaactcaatctatttatctgtaagaaaccattgatgcaaccttttt |
309 |
Q |
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| T |
26881863 |
aagttcactaatctcccttctctgttgattgcttcttctctgtgagttttctttcaacgcaatctatttatgtgtaagaaaccattgatgcaaccttttt |
26881764 |
T |
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| Q |
310 |
gaatgcatgaacttgctgctttgaatatatttaatttatatacagtgacgacgatgtaaatattgttgcgcatgcattcaatcaaatcatgtcatgtata |
409 |
Q |
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| T |
26881763 |
gaatgtatgaacttgctgctttgaatatatttaatttgtatacact---gacgatgtaaatattgttgcgcatgcattcaatcaaatcacgtcatatata |
26881667 |
T |
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